AT5G43930

Transducin family protein WD-40 repeat family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0001434
Physical Location & Seq
Forward (+)
17676795 .. 17681100
4306 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G43930.4

Sequence Viewer

Length: 2181 bp
ATGACTCAATCTATCTGTTCGTCGTCACAAGATCAATCTTCTTCTCCTCGCTCTTTGATCACACCACGCAAATCGGCGACGAAGTTTCACCGCCGCAGGGGGAGGAGTGTATTTAACATGCTGGTTCAGAGGGAAATGTCACCAAAGGCTAAGTTTGTGCCAAGGAAACGATGGGGTAAGAGTAGATGGTATACTGATTCTTCATGCGGAACCAACAACGAGTCTATGAAAGAGACGGGACAAAGTCTTACCTCATGGGTTGAGGCAGAGTCATTGCAGCATTTATCTGCAAAATATTGTCCTCTTGGAGCTCCTCCAAGGTCAACTATTGCTGCGGCTTTTAGTACTGATGGAAGAACTCTTGCTTCTACACATGGTGATCATACTGTGAAGATTATTGATTGTGAAACTGGAAACTGCTTAAAAGTTTTGACTGGCCATAGGAGGACTCCTTGGGTAGTCAGATTCCACCCGCATCATTCAGAAATAGTTGCGAGTGGAAGTTTAGATCTCGAGGTCCGCTTATGGAATACCACAACTTCTGAATGCATTAGATCTCATCTATTCTATCGGCCTATTGCTTCTATCGCTTTCCATGCTGAGGGTGAACTACTTGCTGTTGCTTCTGGTCATAAGCTGCACATGTGGCACTACAATAGGAGAGGAGAGGGATCATCACCAACTGTTGTATTGAAGACGAGGCGATCTTTGAGAGCTGTACACTTTCACCCTCATGGGGCTCCATTACTTTTGACCGCAGAGGTGAATGAGATTGATTCATTAGATTCTTCAATGTCTAGAGCAACATCTATGGGCTACTTGAGGTATCCGCCCCCTGCTATTTTGTTCACAAGCACGGAAAGCAATCAAACTAGTTTGGCAGCAGAAAATGAGAACAGAACATCGTCTCCTCCTCTTCCCTTGGCTACATCCAGTGGTCCTTCTGGTCCAAATAGTGTTCCAGGAAATTCTCCCAGCAACATATTTCTTACCCGAGCTGGAGATAGAACTTCTCCTGCAGTTGATGGCATGGATGTAGATGAAGCTCAACCTGTTGGAAGAAATGGAATCCCTAGCCAAGTTTCAAATAGATCAGATTTCCCTGAGCTTGGACAGATTCGGCAATTATTTCACTTTAGGGATCGAGTTTCCTGGGAGTTACCTTTTCTACAAGGATGGTTGATGGCTCAAGGTCATGGTGTTGCTAATCCAGTGGTTACTCCTACTGGCAGTAGTAATCATGGCATCTCAGCTCCATCCTCAACAGCCAGTCTGGAGGCTGCAGTAGCGTTATTAGAAATCCCGAGTGGTGTTAACTTACATGCGGTGTCTAGAAGAGGCGGGGCTCAGGAACAAACTTCACAACCCCAATTCTCGAGAACTGGATTACCGGAAGGTGTATCTTCTCGTAACACTCAACATGGAAGTGATGCTCAACCTGTAGTAAATAGGGTCCAGTCTGAGCTTGCTACCTCAATTGCTGCTTCGGCTGCAGCAGCTGCTGCTGCAGAATTACCTTGTACTGTCAAACTCAGAATGTGGTCGCATGACATCAAAGACCCATATGCACAACTGAAATCCGACAGATGTCTATTTACAATACCGCATGCCGTCCTTTGCAGTGAAATGGGAGCTCATTATTCGCCATGTGGGAGATATTTAGCGGCCTGTGTTGCGTGTGTTTTTCCTCATGGTGAGATAGATCCTGGACTGCAGACACAAGCTCAACAAGATTCAGGGCTTGCAACTTCCCCAACTCGACACCCTGTCACAGCACACCAAGTCATTTACGAGCTTCGTGTGTATTCTCTCCAGAAGGAAAGTTTTGGTTCAGTACTTGTGTCACGGGCAATTAGAGCTGCACATTGCTTGACCTCTATCCAGTTCTCACCCACTTCGGAGCATATACTACTTGCATATGGGCGGCGTCATGGTTCTCTTTTGAGGAGCATCGTTAGTGATGGTGAAACAACATCACATTTTTTCACAGTATTGGAGATATACAGAGTTTCAGATATGGAGCTTGTGAGAGTACTGCCAAGTTCAGAGGATGAAGTGAACGTTGCGTGTTTTCATCCTTCTCCTGGAGGAGGTCTTGTTTATGGGACAAAGGAGGGGAAACTGAGGATCTTCCAGTACAATACAGCTGCTACCTCAAACTTCACAGGACCAAACACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000422 GO:0000423 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005856 GO:0005929 GO:0005930 GO:0006914 GO:0006950 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009790 GO:0009792 GO:0009888 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010506 GO:0010508 GO:0010562 GO:0010656 GO:0010660 GO:0010662 GO:0010664 GO:0010665 GO:0010667 GO:0010941 GO:0016043 GO:0016236 GO:0019216 GO:0019220 GO:0019222 GO:0019899 GO:0021915 GO:0022411 GO:0022607 GO:0030139 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031625 GO:0031982 GO:0032501 GO:0032502 GO:0032838 GO:0033554 GO:0033674 GO:0035295 GO:0042127 GO:0042325 GO:0042327 GO:0042981 GO:0042995 GO:0043009 GO:0043066 GO:0043067 GO:0043069 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043523 GO:0043524 GO:0043549 GO:0043550 GO:0043551 GO:0043552 GO:0044085 GO:0044093 GO:0044237 GO:0044248 GO:0044389 GO:0044422 GO:0044424 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045335 GO:0045834 GO:0045937 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051174 GO:0051338 GO:0051347 GO:0051716 GO:0060429 GO:0060548 GO:0061726 GO:0061912 GO:0061919 GO:0065007 GO:0065009 GO:0070925 GO:0071840 GO:0080090 GO:0090218 GO:0097014 GO:0097708 GO:0098780 GO:0099568 GO:0120025 GO:0120038 GO:1901214 GO:1901215 GO:1903008 GO:1903725 GO:1903727 GO:1905037
KEGG Pathways
Metabolic & Signaling
ko04137 ko04140 map04137 map04140
Pfam Domains
Protein Families
WD40

Protein Analysis

726

Amino Acids

78.94

Weight (kDa)

8.85

Isoelectric Point (pI)

56.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_1st PF25173 111 - 241 1.1e-08 WDR3 first beta-propeller domain
WD40_CDC20-Fz PF24807 114 - 243 5.9e-06 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 177 - 275 8e-06 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 178 - 276 1.4e-08 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 178 - 281 6.4e-09 THOC3 beta-propeller domain
WD40_Prp19 PF24814 178 - 271 3.1e-06 Prp19 WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 191
AclI AACGTT 1 cut(s) 2061
AclWI GGATC 4 cut(s) 679, 1149, 1697, 2135
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 1 cut(s) 967
AcyI GRCGYC 1 cut(s) 1927
AdeI CACNNNGTG 1 cut(s) 377
AfaI GTAC 6 cut(s) 346, 720, 1522, 1836, 2034, 2138
AfiI CCNNNNNNNGG 6 cut(s) 97, 601, 736, 1109, 2084, 2090
AflIII ACRYGT 1 cut(s) 642
AgsI TTSAA 3 cut(s) 694, 792, 1086
AhdI GACNNNNNGTC 1 cut(s) 1766
AhlI ACTAGT 1 cut(s) 872
AjnI CCWGG 4 cut(s) 961, 1151, 1705, 2083
AloI GAACNNNNNNTCC 2 cut(s) 892, 924
Alw21I GWGCWC 2 cut(s) 313, 1636
Alw26I GTCTC 2 cut(s) 227, 912
AlwI GGATC 4 cut(s) 679, 1149, 1697, 2135
AlwNI CAGNNNCTG 2 cut(s) 1499, 1502
Ama87I CYCGRG 4 cut(s) 512, 993, 1303, 1375
AoxI GGCC 3 cut(s) 436, 572, 1665
ApoI RAATTY 1 cut(s) 967
AspS9I GGNCC 5 cut(s) 517, 938, 947, 1453, 2168
AvaI CYCGRG 4 cut(s) 512, 993, 1303, 1375
AvaII GGWCC 5 cut(s) 517, 938, 947, 1453, 2168
BalI TGGCCA 1 cut(s) 438
BanII GRGCYC 4 cut(s) 313, 742, 1348, 1636
BbsI GAAGAC 1 cut(s) 701
Bbv12I GWGCWC 2 cut(s) 313, 1636
BbvCI CCTCAGC 1 cut(s) 600
BccI CCATC 8 cut(s) 165, 180, 344, 1019, 1170, 1177, 1264, 1955
BceAI ACGGC 1 cut(s) 1595
BciT130I CCWGG 4 cut(s) 963, 1153, 1707, 2085
BciVI GTATCC 1 cut(s) 837
BclI TGATCA 2 cut(s) 57, 379
BcoDI GTCTC 2 cut(s) 227, 912
BcuI ACTAGT 1 cut(s) 872
BfaI CTAG 4 cut(s) 798, 873, 1074, 1332
BfmI CTRYAG 6 cut(s) 1017, 1281, 1440, 1491, 1506, 1712
BfuI GTATCC 1 cut(s) 837
BglII AGATCT 2 cut(s) 508, 554
BmcAI AGTACT 3 cut(s) 346, 1836, 2034
Bme1390I CCNGG 4 cut(s) 963, 1153, 1707, 2085
Bme18I GGWCC 5 cut(s) 517, 938, 947, 1453, 2168
BmeRI GACNNNNNGTC 1 cut(s) 1766
BmeT110I CYCGRG 4 cut(s) 512, 993, 1303, 1375
BmgT120I GGNCC 5 cut(s) 517, 938, 947, 1453, 2168
BmiI GGNNCC 3 cut(s) 211, 741, 1454
BmrFI CCNGG 4 cut(s) 963, 1153, 1707, 2085
BmsI GCATC 4 cut(s) 484, 1254, 1420, 1959
BoxI GACNNNNGTC 1 cut(s) 1587
BpiI GAAGAC 1 cut(s) 701
BpmI CTGGAG 4 cut(s) 1020, 1295, 1796, 2106
Bpu10I CCTNAGC 3 cut(s) 600, 1104, 1347
BpuEI CTTGAG 2 cut(s) 841, 1173
BsaHI GRCGYC 1 cut(s) 1927
BsaJI CCNNGG 5 cut(s) 161, 317, 452, 921, 1152
BsaWI WCCGGW 1 cut(s) 1390
BsaXI ACNNNNNCTCC 4 cut(s) 892, 922, 2082, 2112
Bsc4I CCNNNNNNNGG 6 cut(s) 97, 601, 736, 1109, 2084, 2090
Bse3DI GCAATG 2 cut(s) 272, 1864
BseBI CCWGG 4 cut(s) 963, 1153, 1707, 2085
BseDI CCNNGG 5 cut(s) 161, 317, 452, 921, 1152
BseGI GGATG 6 cut(s) 929, 1039, 1181, 1256, 2056, 2074
BseLI CCNNNNNNNGG 6 cut(s) 97, 601, 736, 1109, 2084, 2090
BseMI GCAATG 2 cut(s) 272, 1864
BseMII CTCAG 7 cut(s) 591, 1095, 1263, 1361, 1452, 1546, 2114
BseRI GAGGAG 8 cut(s) 36, 118, 303, 678, 900, 903, 1960, 2103
BseYI CCCAGC 1 cut(s) 974
BsgI GTGCAG 2 cut(s) 623, 1845
BshFI GGCC 3 cut(s) 438, 574, 1667
BsiHKAI GWGCWC 2 cut(s) 313, 1636
BsiHKCI CYCGRG 4 cut(s) 512, 993, 1303, 1375
BsiSI CCGG 1 cut(s) 1391
BslFI GGGAC 2 cut(s) 252, 2119
BslI CCNNNNNNNGG 6 cut(s) 97, 601, 736, 1109, 2084, 2090
BsmAI GTCTC 2 cut(s) 227, 912
BsmBI CGTCTC 2 cut(s) 227, 912
BsmFI GGGAC 2 cut(s) 252, 2119
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 3 cut(s) 438, 574, 1667
BsoBI CYCGRG 4 cut(s) 512, 993, 1303, 1375
Bsp1286I GDGCHC 4 cut(s) 313, 742, 1348, 1636
Bsp1407I TGTACA 1 cut(s) 718
BspANI GGCC 3 cut(s) 438, 574, 1667
BspCNI CTCAG 7 cut(s) 592, 1096, 1262, 1360, 1453, 1545, 2115
BspLI GGNNCC 3 cut(s) 211, 741, 1454
BspMAI CTGCAG 5 cut(s) 1021, 1285, 1495, 1510, 1716
BspPI GGATC 4 cut(s) 679, 1149, 1697, 2135
BsrDI GCAATG 2 cut(s) 272, 1864
BsrGI TGTACA 1 cut(s) 718
BssECI CCNNGG 5 cut(s) 161, 317, 452, 921, 1152
BssNAI GTATAC 1 cut(s) 192
BssNI GRCGYC 1 cut(s) 1927
BssT1I CCWWGG 4 cut(s) 161, 317, 452, 921
Bst1107I GTATAC 1 cut(s) 192
Bst2UI CCWGG 4 cut(s) 963, 1153, 1707, 2085
Bst4CI ACNGT 4 cut(s) 388, 685, 1525, 1990
Bst6I CTCTTC 2 cut(s) 921, 1330
BstACI GRCGYC 1 cut(s) 1927
BstAPI GCANNNNNTGC 2 cut(s) 1499, 1502
BstAUI TGTACA 1 cut(s) 718
BstC8I GCNNGC 3 cut(s) 1467, 1608, 1743
BstDEI CTNAG 8 cut(s) 150, 600, 1104, 1249, 1347, 1461, 1532, 2123
BstENI CCTNNNNNAGG 1 cut(s) 2088
BstF5I GGATG 6 cut(s) 929, 1039, 1181, 1256, 2056, 2074
BstMAI GTCTC 2 cut(s) 227, 912
BstNI CCWGG 4 cut(s) 963, 1153, 1707, 2085
BstNSI RCATGY 4 cut(s) 121, 646, 1325, 1610
BstPAI GACNNNNGTC 1 cut(s) 1587
BstSCI CCNGG 4 cut(s) 961, 1151, 1705, 2083
BstSFI CTRYAG 6 cut(s) 1017, 1281, 1440, 1491, 1506, 1712
BstV2I GAAGAC 1 cut(s) 701
BstX2I RGATCY 4 cut(s) 508, 554, 1702, 2127
BstYI RGATCY 4 cut(s) 508, 554, 1702, 2127
BstZ17I GTATAC 1 cut(s) 192
BsuI GTATCC 1 cut(s) 837
BsuRI GGCC 3 cut(s) 438, 574, 1667
BtsCI GGATG 6 cut(s) 929, 1039, 1181, 1256, 2056, 2074
BtsI GCAGTG 1 cut(s) 1627
BtsIMutI CAGTG 3 cut(s) 940, 1218, 1627
Cac8I GCNNGC 3 cut(s) 1467, 1608, 1743
CaiI CAGNNNCTG 2 cut(s) 1499, 1502
Cfr13I GGNCC 5 cut(s) 517, 938, 947, 1453, 2168
CseI GACGC 1 cut(s) 1916
Csp6I GTAC 6 cut(s) 345, 719, 1521, 1835, 2033, 2137
CviQI GTAC 6 cut(s) 345, 719, 1521, 1835, 2033, 2137
DdeI CTNAG 8 cut(s) 150, 600, 1104, 1249, 1347, 1461, 1532, 2123
DraIII CACNNNGTG 1 cut(s) 377
DriI GACNNNNNGTC 1 cut(s) 1766
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 2 cut(s) 921, 1330
Eam1105I GACNNNNNGTC 1 cut(s) 1766
EarI CTCTTC 2 cut(s) 921, 1330
EciI GGCGGA 1 cut(s) 819
Ecl136II GAGCTC 2 cut(s) 311, 1634
Eco130I CCWWGG 4 cut(s) 161, 317, 452, 921
Eco24I GRGCYC 4 cut(s) 313, 742, 1348, 1636
Eco47I GGWCC 5 cut(s) 517, 938, 947, 1453, 2168
Eco53kI GAGCTC 2 cut(s) 311, 1634
Eco88I CYCGRG 4 cut(s) 512, 993, 1303, 1375
EcoICRI GAGCTC 2 cut(s) 311, 1634
EcoNI CCTNNNNNAGG 1 cut(s) 2088
EcoRII CCWGG 4 cut(s) 961, 1151, 1705, 2083
EcoT14I CCWWGG 4 cut(s) 161, 317, 452, 921
EcoT22I ATGCAT 1 cut(s) 551
EcoT38I GRGCYC 4 cut(s) 313, 742, 1348, 1636
ErhI CCWWGG 4 cut(s) 161, 317, 452, 921
Esp3I CGTCTC 2 cut(s) 227, 912
FaqI GGGAC 2 cut(s) 252, 2119
FauI CCCGC 2 cut(s) 480, 1334
FauNDI CATATG 2 cut(s) 1564, 1918
FbaI TGATCA 2 cut(s) 57, 379
FblI GTMKAC 1 cut(s) 191
FokI GGATG 6 cut(s) 916, 1046, 1188, 1243, 2061, 2063
FriOI GRGCYC 4 cut(s) 313, 742, 1348, 1636
FspBI CTAG 4 cut(s) 798, 873, 1074, 1332
GsaI CCCAGC 1 cut(s) 978
GsuI CTGGAG 4 cut(s) 1020, 1295, 1796, 2106
HaeIII GGCC 3 cut(s) 438, 574, 1667
HapII CCGG 1 cut(s) 1391
HgaI GACGC 1 cut(s) 1916
Hin1I GRCGYC 1 cut(s) 1927
HincII GTYRAC 2 cut(s) 324, 1315
HindII GTYRAC 2 cut(s) 324, 1315
HpaI GTTAAC 1 cut(s) 1315
HpaII CCGG 1 cut(s) 1391
Hpy166II GTNNAC 7 cut(s) 192, 324, 608, 721, 849, 1315, 2059
Hpy188III TCNNGA 9 cut(s) 512, 798, 1274, 1303, 1332, 1349, 1375, 1377, 1813
Hpy8I GTNNAC 7 cut(s) 192, 324, 608, 721, 849, 1315, 2059
Hpy99I CGWCG 2 cut(s) 25, 82
HpyAV CCTTC 4 cut(s) 951, 1388, 1810, 2088
HpyCH4III ACNGT 4 cut(s) 388, 685, 1525, 1990
HpyCH4IV ACGT 1 cut(s) 2061
HpyF3I CTNAG 8 cut(s) 150, 600, 1104, 1249, 1347, 1461, 1532, 2123
HpySE526I ACGT 1 cut(s) 2061
Hsp92I GRCGYC 1 cut(s) 1927
Ksp22I TGATCA 2 cut(s) 57, 379
KspAI GTTAAC 1 cut(s) 1315
LmnI GCTCC 8 cut(s) 308, 316, 745, 1258, 1631, 1900, 1947, 2020
LweI GCATC 4 cut(s) 484, 1254, 1420, 1959
MaeI CTAG 4 cut(s) 798, 873, 1074, 1332
MaeII ACGT 1 cut(s) 2061
MaeIII GTNAC 7 cut(s) 24, 138, 1158, 1216, 1409, 1768, 1842
MfeI CAATTG 1 cut(s) 1476
MflI RGATCY 4 cut(s) 508, 554, 1702, 2127
MhlI GDGCHC 4 cut(s) 313, 742, 1348, 1636
MlsI TGGCCA 1 cut(s) 438
MluCI AATT 6 cut(s) 967, 1124, 1370, 1476, 1511, 1851
MluNI TGGCCA 1 cut(s) 438
MlyI GAGTC 3 cut(s) 230, 278, 442
MmeI TCCRAC 2 cut(s) 1036, 1605
Mox20I TGGCCA 1 cut(s) 438
Mph1103I ATGCAT 1 cut(s) 551
MscI TGGCCA 1 cut(s) 438
MseI TTAA 3 cut(s) 114, 422, 1314
MslI CAYNNNNRTG 2 cut(s) 732, 1425
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 2 cut(s) 1499, 2147
MspI CCGG 1 cut(s) 1391
MspR9I CCNGG 4 cut(s) 963, 1153, 1707, 2085
MunI CAATTG 1 cut(s) 1476
Mva1269I GAATGC 1 cut(s) 551
MvaI CCWGG 4 cut(s) 963, 1153, 1707, 2085
NdeI CATATG 2 cut(s) 1564, 1918
NlaIV GGNNCC 3 cut(s) 211, 741, 1454
NmuCI GTSAC 4 cut(s) 24, 138, 1768, 1842
NsiI ATGCAT 1 cut(s) 551
NspI RCATGY 4 cut(s) 121, 646, 1325, 1610
PaeI GCATGC 1 cut(s) 1610
PaeR7I CTCGAG 2 cut(s) 512, 1375
PciI ACATGT 1 cut(s) 642
PctI GAATGC 1 cut(s) 551
PfeI GAWTC 7 cut(s) 197, 465, 776, 785, 1068, 1117, 1733
PflFI GACNNNGTC 1 cut(s) 243
PfoI TCCNGGA 3 cut(s) 961, 1705, 2083
PleI GAGTC 3 cut(s) 229, 277, 442
PpsI GAGTC 3 cut(s) 229, 277, 442
PscI ACATGT 1 cut(s) 642
PshAI GACNNNNGTC 1 cut(s) 1587
Psp124BI GAGCTC 2 cut(s) 313, 1636
Psp1406I AACGTT 1 cut(s) 2061
Psp6I CCWGG 4 cut(s) 961, 1151, 1705, 2083
PspFI CCCAGC 1 cut(s) 974
PspGI CCWGG 4 cut(s) 961, 1151, 1705, 2083
PspN4I GGNNCC 3 cut(s) 211, 741, 1454
PspPI GGNCC 5 cut(s) 517, 938, 947, 1453, 2168
PstI CTGCAG 5 cut(s) 1021, 1285, 1495, 1510, 1716
PstNI CAGNNNCTG 2 cut(s) 1499, 1502
PsuI RGATCY 4 cut(s) 508, 554, 1702, 2127
PsyI GACNNNGTC 1 cut(s) 243
PvuII CAGCTG 2 cut(s) 1499, 2147
RsaI GTAC 6 cut(s) 346, 720, 1522, 1836, 2034, 2138
RsaNI GTAC 6 cut(s) 345, 719, 1521, 1835, 2033, 2137
RseI CAYNNNNRTG 2 cut(s) 732, 1425
SacI GAGCTC 2 cut(s) 313, 1636
SaqAI TTAA 3 cut(s) 114, 422, 1314
Sau96I GGNCC 5 cut(s) 517, 938, 947, 1453, 2168
ScaI AGTACT 3 cut(s) 346, 1836, 2034
SchI GAGTC 3 cut(s) 230, 278, 442
ScrFI CCNGG 4 cut(s) 963, 1153, 1707, 2085
SduI GDGCHC 4 cut(s) 313, 742, 1348, 1636
SfaNI GCATC 4 cut(s) 484, 1254, 1420, 1959
SfcI CTRYAG 6 cut(s) 1017, 1281, 1440, 1491, 1506, 1712
Sfr274I CTCGAG 2 cut(s) 512, 1375
SinI GGWCC 5 cut(s) 517, 938, 947, 1453, 2168
SlaI CTCGAG 2 cut(s) 512, 1375
SmiMI CAYNNNNRTG 2 cut(s) 732, 1425
SmlI CTYRAG 4 cut(s) 512, 820, 1188, 1375
SmoI CTYRAG 4 cut(s) 512, 820, 1188, 1375
SpeI ACTAGT 1 cut(s) 872
SphI GCATGC 1 cut(s) 1610
Sse9I AATT 6 cut(s) 967, 1124, 1370, 1476, 1511, 1851
SspI AATATT 1 cut(s) 296
SspMI CTAG 4 cut(s) 798, 873, 1074, 1332
SstI GAGCTC 2 cut(s) 313, 1636
StyD4I CCNGG 4 cut(s) 961, 1151, 1705, 2083
StyI CCWWGG 4 cut(s) 161, 317, 452, 921
TaaI ACNGT 4 cut(s) 388, 685, 1525, 1990
TaiI ACGT 1 cut(s) 2064
TaqI TCGA 4 cut(s) 513, 1144, 1376, 1759
TasI AATT 6 cut(s) 967, 1124, 1370, 1476, 1511, 1851
TatI WGTACW 6 cut(s) 344, 718, 1520, 1834, 2032, 2136
TauI GCSGC 4 cut(s) 96, 338, 1667, 1927
TfiI GAWTC 7 cut(s) 197, 465, 776, 785, 1068, 1117, 1733
Tru1I TTAA 3 cut(s) 114, 422, 1314
Tru9I TTAA 3 cut(s) 114, 422, 1314
TscAI CASTG 3 cut(s) 940, 1218, 1627
TseFI GTSAC 4 cut(s) 24, 138, 1768, 1842
Tsp45I GTSAC 4 cut(s) 24, 138, 1768, 1842
TspDTI ATGAA 6 cut(s) 192, 242, 768, 1056, 2063, 2067
TspGWI ACGGA 1 cut(s) 872
TspRI CASTG 3 cut(s) 940, 1218, 1627
Tth111I GACNNNGTC 1 cut(s) 243
VpaK11BI GGWCC 5 cut(s) 517, 938, 947, 1453, 2168
XagI CCTNNNNNAGG 1 cut(s) 2088
XapI RAATTY 1 cut(s) 967
XbaI TCTAGA 2 cut(s) 797, 1331
XceI RCATGY 4 cut(s) 121, 646, 1325, 1610
XcmI CCANNNNNNNNNTGG 1 cut(s) 168
XhoI CTCGAG 2 cut(s) 512, 1375
XmiI GTMKAC 1 cut(s) 191
XspI CTAG 4 cut(s) 798, 873, 1074, 1332
ZrmI AGTACT 3 cut(s) 346, 1836, 2034
Zsp2I ATGCAT 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.