Prupe.1G053600_v2.0.a1

WD40 repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001434
Physical Location & Seq
Reverse (-)
3723717 .. 3731594
7878 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G053600.2

Sequence Viewer

Length: 2307 bp
ATGAGGGCAGGTTCTTTGTGGGCCGACGAGCCCAATGCTCCGTCTACCTCTGTGCCGCGCATTCCTCAGCCCCATCCATGCAAGCACAGTGTTAGCAATGTCCTTAGACTGTTAGCACGGAGAGAGGTTTCTCCTCAAACAAAAAACTCGTCAAAGAAACTATGGGGGGAAGCTTCTAAGTCTCATTCTGATTCTATTGGCTCAAGGTGCGAAGCAGCTAGAGATGCTAGACATGGCCTTGTCTCATGGGTGGAGGCAGAGTCACTACAGCATTTGTCTGCCAGATATTGTCCGCTTGTGCCACCTCCACGGTCAACTATTGCAGCAGCCTTCAGCCCCGATGGAAAGACACTGGCTTCTACTCACGGAGACCATACTGTAAAGATTATTGATTGCCGAACTGGGATCTGCTTAAAGGTGTTGAGTGGTCACCGTAGGACACCTTGGGTGGTTAGGTTTCATCCTTTGCAGCCAGACATTTTGGCTAGCGGAAGTTTGGATCATGAAGTTCGCTTGTGGGATGCAAACACGGCAGAGTGTATAGGATCACGTGATTTTTTGCGTCCCATTGCTTCGATAGCTTTTCATGCCCAAGGTGAGCTTCTTGCTGTTGCGTCAGGTCACAAGTTATACATATGGCACTACAATAAGAGAGGGGAGACATCCTCACCAACCATAGTACTGAAAACACGACGTTCACTTCGGGCTGTGCATTTTCACCCGCATGCAGCTCCGTTTCTTTTAACTGCCGAGGTCAATGACCTTGACTCATCAGATTCCTCGATGACACTTGCAACTTCTCCGGGTTACCTGCGCTATCCTCCACCTACTGTATATTTGGCAGATGCTCACTCTAGTGATCGTTCTGGTTTGGCAGATGGACTACCTCTTATGTCTCTACCATTTCTGATATGGCCTTCATTTGCTAGAGATAATGGGAGAATATCTATGCAGCGTAGTGATCTGGACAATGGTTCAAGTAATGCACAACAAAGAGTTGATCCTTCAGCTTCAGTGCGGCTTCTAACATATTCAACTCCTTCAGGGCAGTATGAACTTCTGTTGTCCCCAATTGAACCTAATAGCTCTTCTCCAGTGCCAGAAGACACAGGAACTAATCCTTTCTTGAGTGAAATGGAAACTGAAGTTTCTCAACCTGCAATGGACAGTTTGGAGCCTATGGAAATTCAACCAGAAGGGAGAAGTAATCATATTTTCCCATTTGGTGACTCAACATATTGGGAACTTCCTTTCTTACAAGGGTGGTTAATTGGTCAGACCCAAGCTAGCCAACGGAATATGCGGCTGGTAGGTGATGCTGCACATGATAATCCATCTCCACACGGTGAGATGGATAATACAGCTCCCTTAACTTCCTCAGTAATACCGACCAGTGTGAATCAATCCAGGGGTACTGGAAGATCTAGTTCCCGGCATCGTACTTCACGTACTCATATGGTGCCAACAATTGGGTCTAATGAAGGTGCTGGATTCAATAATATCACACACAGTGAAAGTGAGCCTCAACCTGTTGTGAACAGAATCCAATCTGAACTTGCAAACTCATTTGCTGCAGCAGCAGCTGCAGAGTTACCTTGCACTGTGAAGCTCAGAATTTGGCCACATGATGTGAAAAATCCTTGTGCTCCCCTTGATGCAGAAAGATGTCGCTTAATCATTCCACATGCTGTACTTTGTAGTGAAATGGGTGCCCATTTTTCCCCTTGTGGAAAGTTTTTAGCCGCTTGTGTTGCATGTATGTTGCCCCATATGGAAGCTGATCCTGGATTACAGAGCCAGGTCAACAATGATGTCACAGGGGCAGCAACTTCTCCAACTCGACATCCAATTTCAGCTCACCATGTCGTATATGAGCTCCGGATATATTCCCTTGAGGAGGCAACATTTGGCATGGTTCTTGCATCCCGGGCAATAAGAGCTGCCCATTGCTTGACATCTATTCAGTTCTCTCCTACATCAGAGCATATATTACTTGCCTATGGCCGTCGTCACAGTTCACTTCTTAAGAGTGTTGTCATTGATGGAGAGACAACAGTGCCTATTTACACCATTCTGGAGGTCTATAGAGTTTCTGATATGGAACTTGTGAGAGTCCTTCCTAGTGCAGAGGATGAAGTCAATGTCGCTTGCTTTCATCCTTCAGTTGGAGGTGGCCTTGTCTATGGAACTAAGGAAGGGAAGTTACGGATCCTCCAATATGATAGTTCTCATGGAATGAGTCATACAACATCCGCTTTTCTTGATGAAAACATGCTTGAGGTCCCAACATATGCTTTGGAATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04137 ko04140 map04137 map04140
Pfam Domains
Protein Families
WD40

Protein Analysis

769

Amino Acids

83.85

Weight (kDa)

6.31

Isoelectric Point (pI)

53.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 819, 1165
AccB1I GGYRCC 2 cut(s) 1459, 1709
AccB7I CCANNNNNTGG 1 cut(s) 1469
AccI GTMKAC 1 cut(s) 44
AccII CGCG 1 cut(s) 58
AccIII TCCGGA 1 cut(s) 1878
AciI CCGC 8 cut(s) 56, 293, 489, 722, 1018, 1303, 1743, 2253
AclWI GGATC 7 cut(s) 413, 507, 553, 995, 1775, 2203, 2216
AcoI YGGCCR 2 cut(s) 1619, 2002
AcsI RAATTY 2 cut(s) 1185, 1614
AcuI CTGAAG 6 cut(s) 316, 990, 996, 1026, 1164, 2145
AcvI CACGTG 1 cut(s) 551
AdeI CACNNNGTG 2 cut(s) 1346, 1511
AfaI GTAC 5 cut(s) 681, 1414, 1441, 1450, 1692
AfiI CCNNNNNNNGG 3 cut(s) 1469, 1897, 2165
AflII CTTAAG 1 cut(s) 2024
AgsI TTSAA 5 cut(s) 978, 1035, 1076, 1190, 1495
AjnI CCWGG 3 cut(s) 1406, 1783, 1797
AjuI GAANNNNNNNTTGG 2 cut(s) 585, 617
AleI CACNNNNGTG 1 cut(s) 855
Alw21I GWGCWC 2 cut(s) 1648, 1878
Alw26I GTCTC 6 cut(s) 186, 247, 363, 653, 900, 2042
AlwI GGATC 7 cut(s) 413, 507, 553, 995, 1775, 2203, 2216
AlwNI CAGNNNCTG 1 cut(s) 1583
Ama87I CYCGRG 1 cut(s) 1926
Aor13HI TCCGGA 1 cut(s) 1878
AoxI GGCC 6 cut(s) 21, 235, 914, 1619, 2002, 2173
ApoI RAATTY 2 cut(s) 1185, 1614
ArsI GACNNNNNNTTYG 4 cut(s) 134, 166, 684, 716
AspLEI GCGC 2 cut(s) 60, 816
AspS9I GGNCC 2 cut(s) 21, 2281
AsuC2I CCSGG 4 cut(s) 804, 1432, 1927, 1928
AsuHPI GGTGA 8 cut(s) 422, 608, 660, 710, 1238, 1325, 1358, 1850
AsuNHI GCTAGC 2 cut(s) 485, 1286
AvaI CYCGRG 1 cut(s) 1926
AvaII GGWCC 1 cut(s) 2281
BaeGI GKGCMC 1 cut(s) 1714
BalI TGGCCA 1 cut(s) 1621
BamHI GGATCC 1 cut(s) 2208
BanI GGYRCC 2 cut(s) 1459, 1709
BanII GRGCYC 2 cut(s) 33, 1878
BarI GAAGNNNNNNTAC 2 cut(s) 2187, 2219
BbrPI CACGTG 1 cut(s) 551
BbsI GAAGAC 1 cut(s) 1110
Bbv12I GWGCWC 2 cut(s) 1648, 1878
BbvCI CCTCAGC 1 cut(s) 66
BccI CCATC 6 cut(s) 81, 335, 872, 1342, 1345, 2036
BceAI ACGGC 2 cut(s) 546, 1989
BcgI CGANNNNNNTGC 2 cut(s) 17, 51
BciT130I CCWGG 3 cut(s) 1408, 1785, 1799
BcnI CCSGG 4 cut(s) 804, 1432, 1927, 1928
BcoDI GTCTC 6 cut(s) 186, 247, 363, 653, 900, 2042
BfaI CTAG 9 cut(s) 219, 228, 486, 855, 927, 1287, 1425, 2121, 2305
BfmI CTRYAG 4 cut(s) 266, 1572, 1584, 2083
BfrI CTTAAG 1 cut(s) 2024
BfuAI ACCTGC 2 cut(s) 819, 1165
BglII AGATCT 1 cut(s) 1421
BmcAI AGTACT 1 cut(s) 681
Bme1390I CCNGG 7 cut(s) 804, 1408, 1432, 1785, 1799, 1927, 1928
Bme18I GGWCC 1 cut(s) 2281
BmeT110I CYCGRG 1 cut(s) 1926
BmgT120I GGNCC 2 cut(s) 21, 2281
BmiI GGNNCC 5 cut(s) 1176, 1461, 1711, 2210, 2283
BmrFI CCNGG 7 cut(s) 804, 1408, 1432, 1785, 1799, 1927, 1928
BmrI ACTGGG 1 cut(s) 411
BmsI GCATC 7 cut(s) 214, 511, 835, 1306, 1444, 1645, 1931
BmtI GCTAGC 2 cut(s) 489, 1290
BmuI ACTGGG 1 cut(s) 411
BpiI GAAGAC 1 cut(s) 1110
BplI GAGNNNNNCTC 2 cut(s) 650, 682
BpmI CTGGAG 2 cut(s) 1077, 2096
Bpu10I CCTNAGC 1 cut(s) 66
BpuEI CTTGAG 4 cut(s) 187, 1147, 1913, 2297
BpuMI CCSGG 4 cut(s) 804, 1432, 1927, 1928
BsaAI YACGTR 2 cut(s) 551, 1448
BsaI GGTCTC 1 cut(s) 363
BsaJI CCNNGG 6 cut(s) 308, 443, 592, 750, 1407, 1926
BsaWI WCCGGW 1 cut(s) 1878
BsaXI ACNNNNNCTCC 4 cut(s) 245, 275, 2196, 2226
Bsc4I CCNNNNNNNGG 3 cut(s) 1469, 1897, 2165
Bse1I ACTGG 5 cut(s) 357, 406, 1094, 1392, 1420
Bse3DI GCAATG 4 cut(s) 103, 567, 1167, 1945
BseAI TCCGGA 1 cut(s) 1878
BseBI CCWGG 3 cut(s) 1408, 1785, 1799
BseDI CCNNGG 6 cut(s) 308, 443, 592, 750, 1407, 1926
BseGI GGATG 9 cut(s) 73, 460, 526, 662, 1843, 1922, 2137, 2155, 2249
BseLI CCNNNNNNNGG 3 cut(s) 1469, 1897, 2165
BseMI GCAATG 4 cut(s) 103, 567, 1167, 1945
BseMII CTCAG 3 cut(s) 80, 1392, 1624
BseNI ACTGG 5 cut(s) 357, 406, 1094, 1392, 1420
BseRI GAGGAG 2 cut(s) 123, 1910
BseSI GKGCMC 1 cut(s) 1714
BsgI GTGCAG 2 cut(s) 1305, 2145
Bsh1236I CGCG 1 cut(s) 58
BshFI GGCC 6 cut(s) 23, 237, 916, 1621, 2004, 2175
BshNI GGYRCC 2 cut(s) 1459, 1709
BsiHKAI GWGCWC 2 cut(s) 1648, 1878
BsiHKCI CYCGRG 1 cut(s) 1926
BsiSI CCGG 4 cut(s) 803, 1432, 1879, 1927
BslFI GGGAC 3 cut(s) 549, 1051, 2267
BslI CCNNNNNNNGG 3 cut(s) 1469, 1897, 2165
BsmAI GTCTC 6 cut(s) 186, 247, 363, 653, 900, 2042
BsmFI GGGAC 3 cut(s) 549, 1051, 2267
BsmI GAATGC 2 cut(s) 60, 2306
BsnI GGCC 6 cut(s) 23, 237, 916, 1621, 2004, 2175
Bso31I GGTCTC 1 cut(s) 363
BsoBI CYCGRG 1 cut(s) 1926
Bsp1286I GDGCHC 4 cut(s) 33, 1648, 1714, 1878
Bsp13I TCCGGA 1 cut(s) 1878
Bsp143I GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
BspACI CCGC 8 cut(s) 56, 293, 489, 722, 1018, 1303, 1743, 2253
BspANI GGCC 6 cut(s) 23, 237, 916, 1621, 2004, 2175
BspCNI CTCAG 3 cut(s) 79, 1391, 1623
BspEI TCCGGA 1 cut(s) 1878
BspFNI CGCG 1 cut(s) 58
BspHI TCATGA 1 cut(s) 502
BspLI GGNNCC 5 cut(s) 1176, 1461, 1711, 2210, 2283
BspMAI CTGCAG 2 cut(s) 1576, 1588
BspMI ACCTGC 2 cut(s) 819, 1165
BspOI GCTAGC 2 cut(s) 489, 1290
BspPI GGATC 7 cut(s) 413, 507, 553, 995, 1775, 2203, 2216
BspQI GCTCTTC 1 cut(s) 1093
BspT107I GGYRCC 2 cut(s) 1459, 1709
BspTI CTTAAG 1 cut(s) 2024
BspTNI GGTCTC 1 cut(s) 363
BsrDI GCAATG 4 cut(s) 103, 567, 1167, 1945
BsrI ACTGG 5 cut(s) 357, 406, 1094, 1392, 1420
BssECI CCNNGG 6 cut(s) 308, 443, 592, 750, 1407, 1926
BssMI GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
BssT1I CCWWGG 2 cut(s) 443, 592
Bst2UI CCWGG 3 cut(s) 1408, 1785, 1799
Bst6I CTCTTC 1 cut(s) 1093
BstAFI CTTAAG 1 cut(s) 2024
BstAPI GCANNNNNTGC 1 cut(s) 1583
BstBAI YACGTR 2 cut(s) 551, 1448
BstC8I GCNNGC 5 cut(s) 83, 487, 726, 1288, 2149
BstDEI CTNAG 6 cut(s) 66, 104, 177, 1378, 1610, 2190
BstDSI CCRYGG 1 cut(s) 308
BstEII GGTNACC 2 cut(s) 428, 806
BstENI CCTNNNNNAGG 1 cut(s) 1895
BstF5I GGATG 9 cut(s) 73, 460, 526, 662, 1843, 1922, 2137, 2155, 2249
BstFNI CGCG 1 cut(s) 58
BstHHI GCGC 2 cut(s) 60, 816
BstKTI GATC 9 cut(s) 408, 502, 548, 862, 964, 1003, 1424, 1783, 2211
BstMAI GTCTC 6 cut(s) 186, 247, 363, 653, 900, 2042
BstMBI GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
BstNI CCWGG 3 cut(s) 1408, 1785, 1799
BstNSI RCATGY 4 cut(s) 728, 1688, 1758, 2275
BstPI GGTNACC 2 cut(s) 428, 806
BstSCI CCNGG 7 cut(s) 802, 1406, 1430, 1783, 1797, 1925, 1926
BstSFI CTRYAG 4 cut(s) 266, 1572, 1584, 2083
BstSLI GKGCMC 1 cut(s) 1714
BstUI CGCG 1 cut(s) 58
BstV2I GAAGAC 1 cut(s) 1110
BstX2I RGATCY 3 cut(s) 405, 1421, 2208
BstYI RGATCY 3 cut(s) 405, 1421, 2208
BsuRI GGCC 6 cut(s) 23, 237, 916, 1621, 2004, 2175
BtgI CCRYGG 1 cut(s) 308
BtsCI GGATG 9 cut(s) 73, 460, 526, 662, 1843, 1922, 2137, 2155, 2249
BtsIMutI CAGTG 8 cut(s) 94, 350, 1020, 1101, 1399, 1516, 1599, 2061
BveI ACCTGC 2 cut(s) 819, 1165
Cac8I GCNNGC 5 cut(s) 83, 487, 726, 1288, 2149
CaiI CAGNNNCTG 1 cut(s) 1583
CciI TCATGA 1 cut(s) 502
CfoI GCGC 2 cut(s) 60, 816
Cfr13I GGNCC 2 cut(s) 21, 2281
Cfr9I CCCGGG 1 cut(s) 1926
CseI GACGC 2 cut(s) 551, 603
Csp6I GTAC 5 cut(s) 680, 1413, 1440, 1449, 1691
CviQI GTAC 5 cut(s) 680, 1413, 1440, 1449, 1691
DdeI CTNAG 6 cut(s) 66, 104, 177, 1378, 1610, 2190
DpnI GATC 9 cut(s) 407, 501, 547, 861, 963, 1002, 1423, 1782, 2210
DpnII GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
DraIII CACNNNGTG 2 cut(s) 1346, 1511
EaeI YGGCCR 2 cut(s) 1619, 2002
Eam1104I CTCTTC 1 cut(s) 1093
EarI CTCTTC 1 cut(s) 1093
Ecl136II GAGCTC 1 cut(s) 1876
Eco130I CCWWGG 2 cut(s) 443, 592
Eco24I GRGCYC 2 cut(s) 33, 1878
Eco31I GGTCTC 1 cut(s) 363
Eco47I GGWCC 1 cut(s) 2281
Eco53kI GAGCTC 1 cut(s) 1876
Eco57I CTGAAG 6 cut(s) 316, 990, 996, 1026, 1164, 2145
Eco72I CACGTG 1 cut(s) 551
Eco88I CYCGRG 1 cut(s) 1926
Eco91I GGTNACC 2 cut(s) 428, 806
EcoICRI GAGCTC 1 cut(s) 1876
EcoNI CCTNNNNNAGG 1 cut(s) 1895
EcoO109I RGGNCCY 1 cut(s) 2281
EcoO65I GGTNACC 2 cut(s) 428, 806
EcoRII CCWGG 3 cut(s) 1406, 1783, 1797
EcoT14I CCWWGG 2 cut(s) 443, 592
EcoT38I GRGCYC 2 cut(s) 33, 1878
ErhI CCWWGG 2 cut(s) 443, 592
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 3 cut(s) 549, 1051, 2267
FauI CCCGC 1 cut(s) 729
FauNDI CATATG 4 cut(s) 635, 1455, 1770, 2290
FblI GTMKAC 1 cut(s) 44
FokI GGATG 9 cut(s) 60, 447, 533, 649, 1830, 1909, 2142, 2144, 2236
FriOI GRGCYC 2 cut(s) 33, 1878
FspBI CTAG 9 cut(s) 219, 228, 486, 855, 927, 1287, 1425, 2121, 2305
GlaI GCGC 2 cut(s) 59, 815
GsuI CTGGAG 2 cut(s) 1077, 2096
HaeIII GGCC 6 cut(s) 23, 237, 916, 1621, 2004, 2175
HapII CCGG 4 cut(s) 803, 1432, 1879, 1927
HgaI GACGC 2 cut(s) 551, 603
HhaI GCGC 2 cut(s) 60, 816
Hin6I GCGC 2 cut(s) 58, 814
HinP1I GCGC 2 cut(s) 58, 814
HincII GTYRAC 2 cut(s) 315, 1804
HindII GTYRAC 2 cut(s) 315, 1804
HindIII AAGCTT 1 cut(s) 171
HpaII CCGG 4 cut(s) 803, 1432, 1879, 1927
HphI GGTGA 8 cut(s) 422, 608, 660, 710, 1238, 1325, 1358, 1850
Hpy166II GTNNAC 6 cut(s) 45, 315, 698, 1537, 1804, 2018
Hpy188I TCNGA 8 cut(s) 190, 775, 909, 1278, 1552, 1613, 1981, 2095
Hpy188III TCNNGA 6 cut(s) 503, 965, 1126, 1879, 2075, 2261
Hpy8I GTNNAC 6 cut(s) 45, 315, 698, 1537, 1804, 2018
Hpy99I CGWCG 3 cut(s) 29, 696, 2010
HpyAV CCTTC 9 cut(s) 340, 927, 1014, 1050, 1190, 1475, 2126, 2169, 2189
HpyCH4IV ACGT 3 cut(s) 550, 694, 1447
HpyF3I CTNAG 6 cut(s) 66, 104, 177, 1378, 1610, 2190
HpySE526I ACGT 3 cut(s) 550, 694, 1447
HspAI GCGC 2 cut(s) 58, 814
Kpn2I TCCGGA 1 cut(s) 1878
Kzo9I GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
LguI GCTCTTC 1 cut(s) 1093
LmnI GCTCC 6 cut(s) 43, 736, 1174, 1369, 1651, 1881
LweI GCATC 7 cut(s) 214, 511, 835, 1306, 1444, 1645, 1931
MaeI CTAG 9 cut(s) 219, 228, 486, 855, 927, 1287, 1425, 2121, 2305
MaeII ACGT 3 cut(s) 550, 694, 1447
MaeIII GTNAC 9 cut(s) 261, 428, 620, 806, 1226, 1590, 1813, 2009, 2202
MalI GATC 9 cut(s) 407, 501, 547, 861, 963, 1002, 1423, 1782, 2210
MboI GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
MboII GAAGA 3 cut(s) 1080, 1115, 1431
MfeI CAATTG 2 cut(s) 1071, 1467
MflI RGATCY 3 cut(s) 405, 1421, 2208
MhlI GDGCHC 4 cut(s) 33, 1648, 1714, 1878
MlsI TGGCCA 1 cut(s) 1621
MluCI AATT 6 cut(s) 1071, 1185, 1269, 1467, 1614, 1848
MluNI TGGCCA 1 cut(s) 1621
MlyI GAGTC 5 cut(s) 269, 761, 1223, 2121, 2248
MmeI TCCRAC 2 cut(s) 1859, 2146
Mox20I TGGCCA 1 cut(s) 1621
MroI TCCGGA 1 cut(s) 1878
MscI TGGCCA 1 cut(s) 1621
MseI TTAA 6 cut(s) 413, 743, 1268, 1370, 1673, 2025
MslI CAYNNNNRTG 2 cut(s) 723, 855
Msp20I TGGCCA 1 cut(s) 1621
MspA1I CMGCKG 1 cut(s) 1583
MspCI CTTAAG 1 cut(s) 2024
MspI CCGG 4 cut(s) 803, 1432, 1879, 1927
MspR9I CCNGG 7 cut(s) 804, 1408, 1432, 1785, 1799, 1927, 1928
MunI CAATTG 2 cut(s) 1071, 1467
Mva1269I GAATGC 2 cut(s) 60, 2306
MvaI CCWGG 3 cut(s) 1408, 1785, 1799
MvnI CGCG 1 cut(s) 58
NciI CCSGG 4 cut(s) 804, 1432, 1927, 1928
NdeI CATATG 4 cut(s) 635, 1455, 1770, 2290
NdeII GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
NheI GCTAGC 2 cut(s) 485, 1286
NlaIV GGNNCC 5 cut(s) 1176, 1461, 1711, 2210, 2283
NmeAIII GCCGAG 1 cut(s) 775
NmuCI GTSAC 6 cut(s) 261, 428, 620, 1226, 1813, 2009
NspI RCATGY 4 cut(s) 728, 1688, 1758, 2275
OliI CACNNNNGTG 1 cut(s) 855
PaeI GCATGC 1 cut(s) 728
PagI TCATGA 1 cut(s) 502
PciSI GCTCTTC 1 cut(s) 1093
PcsI WCGNNNNNNNCGW 1 cut(s) 1444
PctI GAATGC 2 cut(s) 60, 2306
PfeI GAWTC 5 cut(s) 191, 776, 1399, 1491, 1542
PflMI CCANNNNNTGG 1 cut(s) 1469
PfoI TCCNGGA 1 cut(s) 1783
PleI GAGTC 5 cut(s) 268, 761, 1223, 2120, 2247
PmaCI CACGTG 1 cut(s) 551
PmlI CACGTG 1 cut(s) 551
PpsI GAGTC 5 cut(s) 268, 761, 1223, 2120, 2247
Ppu21I YACGTR 2 cut(s) 551, 1448
PpuMI RGGWCCY 1 cut(s) 2281
Psp124BI GAGCTC 1 cut(s) 1878
Psp5II RGGWCCY 1 cut(s) 2281
Psp6I CCWGG 3 cut(s) 1406, 1783, 1797
PspCI CACGTG 1 cut(s) 551
PspEI GGTNACC 2 cut(s) 428, 806
PspGI CCWGG 3 cut(s) 1406, 1783, 1797
PspN4I GGNNCC 5 cut(s) 1176, 1461, 1711, 2210, 2283
PspPI GGNCC 2 cut(s) 21, 2281
PspPPI RGGWCCY 1 cut(s) 2281
PstI CTGCAG 2 cut(s) 1576, 1588
PstNI CAGNNNCTG 1 cut(s) 1583
PsuI RGATCY 3 cut(s) 405, 1421, 2208
PvuII CAGCTG 1 cut(s) 1583
RsaI GTAC 5 cut(s) 681, 1414, 1441, 1450, 1692
RsaNI GTAC 5 cut(s) 680, 1413, 1440, 1449, 1691
RseI CAYNNNNRTG 2 cut(s) 723, 855
SacI GAGCTC 1 cut(s) 1878
SapI GCTCTTC 1 cut(s) 1093
SaqAI TTAA 6 cut(s) 413, 743, 1268, 1370, 1673, 2025
Sau3AI GATC 9 cut(s) 405, 499, 545, 859, 961, 1000, 1421, 1780, 2208
Sau96I GGNCC 2 cut(s) 21, 2281
ScaI AGTACT 1 cut(s) 681
SchI GAGTC 5 cut(s) 269, 761, 1223, 2121, 2248
ScrFI CCNGG 7 cut(s) 804, 1408, 1432, 1785, 1799, 1927, 1928
SduI GDGCHC 4 cut(s) 33, 1648, 1714, 1878
SfaNI GCATC 7 cut(s) 214, 511, 835, 1306, 1444, 1645, 1931
SfcI CTRYAG 4 cut(s) 266, 1572, 1584, 2083
SinI GGWCC 1 cut(s) 2281
SmaI CCCGGG 1 cut(s) 1928
SmiMI CAYNNNNRTG 2 cut(s) 723, 855
SmlI CTYRAG 5 cut(s) 202, 1126, 1892, 2024, 2276
SmoI CTYRAG 5 cut(s) 202, 1126, 1892, 2024, 2276
SphI GCATGC 1 cut(s) 728
Sse9I AATT 6 cut(s) 1071, 1185, 1269, 1467, 1614, 1848
SsiI CCGC 8 cut(s) 56, 293, 489, 722, 1018, 1303, 1743, 2253
SspMI CTAG 9 cut(s) 219, 228, 486, 855, 927, 1287, 1425, 2121, 2305
SstI GAGCTC 1 cut(s) 1878
StyD4I CCNGG 7 cut(s) 802, 1406, 1430, 1783, 1797, 1925, 1926
StyI CCWWGG 2 cut(s) 443, 592
TaiI ACGT 3 cut(s) 553, 697, 1450
TaqI TCGA 3 cut(s) 575, 782, 1840
TasI AATT 6 cut(s) 1071, 1185, 1269, 1467, 1614, 1848
TatI WGTACW 2 cut(s) 679, 1690
TauI GCSGC 4 cut(s) 58, 1021, 1306, 1745
TfiI GAWTC 5 cut(s) 191, 776, 1399, 1491, 1542
Tru1I TTAA 6 cut(s) 413, 743, 1268, 1370, 1673, 2025
Tru9I TTAA 6 cut(s) 413, 743, 1268, 1370, 1673, 2025
TscAI CASTG 8 cut(s) 94, 357, 1020, 1101, 1399, 1516, 1606, 2061
TseFI GTSAC 6 cut(s) 261, 428, 620, 1226, 1813, 2009
Tsp45I GTSAC 6 cut(s) 261, 428, 620, 1226, 1813, 2009
TspDTI ATGAA 9 cut(s) 449, 519, 575, 909, 1068, 1494, 2144, 2148, 2280
TspGWI ACGGA 6 cut(s) 30, 133, 381, 723, 1309, 2221
TspMI CCCGGG 1 cut(s) 1926
TspRI CASTG 8 cut(s) 94, 357, 1020, 1101, 1399, 1516, 1606, 2061
Van91I CCANNNNNTGG 1 cut(s) 1469
Vha464I CTTAAG 1 cut(s) 2024
VpaK11BI GGWCC 1 cut(s) 2281
XagI CCTNNNNNAGG 1 cut(s) 1895
XapI RAATTY 2 cut(s) 1185, 1614
XceI RCATGY 4 cut(s) 728, 1688, 1758, 2275
XcmI CCANNNNNNNNNTGG 1 cut(s) 909
XmaI CCCGGG 1 cut(s) 1926
XmiI GTMKAC 1 cut(s) 44
XspI CTAG 9 cut(s) 219, 228, 486, 855, 927, 1287, 1425, 2121, 2305
ZrmI AGTACT 1 cut(s) 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.