Prupe.8G212400_v2.0.a1

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0001434
Physical Location & Seq
Forward (+)
19596437 .. 19603022
6586 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G212400.1

Sequence Viewer

Length: 2379 bp
ATGAAGTCCGATCTTATAATGACGGGACCTTCACGACCGTTCGATCAGACCCCGATTTCTCCCTCGCCGTCCGATTGTTATCACTGCAGTGGCAGAAATGTGGTTGGCTTGATAGCATGGAGGGAGATTTCTCCTAGAGCAAGACATGTACCGAGAAGGCGGTGGGGAGAATCTTCTAAAAGGAAAACTGGTTCCTCCTCTGGGCCTAAGTGCGAAGCAACACGAGATGCAAAACGTGGCCTTCTTTCATGGGTTGAAGCAGAGTCACTTAAGCATTTGTCAGCCAAGTACTGTCATTTAGTGCCTCCTCCAAGGTCAACTATTGCAGCAGCGTTCAGCCCCGATGGAAGAAAACTTGCTTCGACACATGGTGACCACACTGTAAAGATAATTGATTGCCAAACTGGCAGCTGCTTAAAGGTTTTGAGTGGCCATAGACGGACACCTTGGGTGGTTAGGTTCCACCCCTTGCATCCTGAAATAATTGCTAGTGGAAGTTTGGATCATGAAGTTCGCTTATGGGATTTAAACACATCAGAGTGTATAGGATCTCGCGATTTCTATCGACCTATTGCATCTATTGCTTTTCATGCCAAAGGGGATCTCCTAGCTGTTGCATCAGGACACAAGTTGTATATATGGAACTACAACGGGGAGCGTTCCTCTCCAGACATTGTATTGAAAACATGGCGTTCACTTAGAGCAGTGCATTTTCACCCCCAAGCTGCTCCATTTCTCTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACACTAGCAACATCTCCCGGCTACTTGCAATATCCATCTCCTGCTGTTTTTGTGGCAAATGTTCATTCTAGTGAGCGTCTTAGTTTGGCTGCTGAACTACCACTTCTGTCCTTGCCTTTCGTCTTCGTGCCGCCATTTGTAGATGATCCAAGAATAGAAATGCAGTGTGAAAATGGGCCTGCTGGTTCAAATAGCATGCAAGTCACTTCTGCTTCAATGCAGTTTCCAGCAGATGCAAATGCAGCAGAGCTGGATGGTAGCACAGCTTCTCCTATGGAGACATTTTCATCAGTACGAACTGCCTCCCATTCGAACGCTGAAGAAAATGCAGATAATTCTCACCTTAATGGAACAGTAAGTGGTGTTTGTGACCGCACAGGAGATTCAATGGAGACTGATGAGATGCAGGGTGTAGGGGGGAGCCAACGTGGAAGCTTTACTAATTTAGATTCTGCTAATGATAGAGTACCGGAAGATATTTCAAATCATCTTGATTTTGGGCAACCTCATAGTAGTTTTCCTTATAGAGATCCAGCATTTTGGGAGCTACCTTTTCTCCAAGGGTGGTTAACTGGGCAAAGCCAAGCTAGTTTTCCCTCGATGCTACCTCTTAATCATGATGGGCATGACACTTCTAGTTTAATGTCGCATCTGTCTGCTCATAATGTGGAGGCTGTGGCAGCTTCTTTAGCAATGCCAGGAAGCACCAGCCTATCTGGAGTTTCTGGAAGATCTGGTTTACAGCACTATTATCCGCATTTCCGCTACTCTGTGCCAGATTCTGGGGATGATGCTGCTTCTTTAAATACCCTACATGATGGGAATGATGCTCAGCCCATTATTAGTAGAATCCAGTCTGAAATTACTACATCACTGGCTGCTGCAGCAGCTGCGGAGTTACCATGCACTGTGAAGCTAAGCGTATGGTCGCATGATATAAAAACTCCTTGTGCTCTGCTCAATGCTGAAAGATGCCGCTTAACCATTCCCCATGCTGTTCTTTGCAGTGAAATGGGTGCTCATTTCTCACCTTGTGGGAGATTTTTAGCTGCCTGTGTTGCATGCATGCTGCCTCATACGGAAGCTGATTTTGGACTACAAAGTCTGGTCCATCAGGATTCTGGAATTGCAACATCCCCAACTAGGCACCCAATCTCAGCACACCAAGTCATGTATGAGCTTCGCATATATTCACTTGAGGAGGCAACATTCGGGTCGGTACTTGTGTCTCGGGCTATCAGAGCTGCACATTGTTTGACTTCAATCCAGTTCTCACCCACGTCTGAGCACATATTACTTGCCTATGGTCGACGCCATGGCTCTCTTCTTAAAAGTATTGTCATTGATGGGGAGACAACCTTACCTATTTACACTGTTCTTGAGGTCTACAGAGTTTCAGATATGGAACTTGTGAGAGTACTTCCTAGTGCAGAGGATGAGGTTAATGTTGCTTGCTTTCATCCCTTTGCTGGTGGAGGTCTGGTTTATGGAACCAAGGAAGGGAAGCTTAGGGTACTCCAGTTTGATGGTGCTCATGGTGGGAACTCTGTTGGACCAAATTACTTTACAGAGGAAAATATGGCTGTTGCGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000422 GO:0000423 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005856 GO:0005929 GO:0005930 GO:0006914 GO:0006950 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009790 GO:0009792 GO:0009888 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010506 GO:0010508 GO:0010562 GO:0010656 GO:0010660 GO:0010662 GO:0010664 GO:0010665 GO:0010667 GO:0010941 GO:0016043 GO:0016236 GO:0019216 GO:0019220 GO:0019222 GO:0019899 GO:0021915 GO:0022411 GO:0022607 GO:0030139 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031625 GO:0031982 GO:0032501 GO:0032502 GO:0032838 GO:0033554 GO:0033674 GO:0035295 GO:0042127 GO:0042325 GO:0042327 GO:0042981 GO:0042995 GO:0043009 GO:0043066 GO:0043067 GO:0043069 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043523 GO:0043524 GO:0043549 GO:0043550 GO:0043551 GO:0043552 GO:0044085 GO:0044093 GO:0044237 GO:0044248 GO:0044389 GO:0044422 GO:0044424 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045335 GO:0045834 GO:0045937 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051174 GO:0051338 GO:0051347 GO:0051716 GO:0060429 GO:0060548 GO:0061726 GO:0061912 GO:0061919 GO:0065007 GO:0065009 GO:0070925 GO:0071840 GO:0080090 GO:0090218 GO:0097014 GO:0097708 GO:0098780 GO:0099568 GO:0120025 GO:0120038 GO:1901214 GO:1901215 GO:1903008 GO:1903725 GO:1903727 GO:1905037
KEGG Pathways
Metabolic & Signaling
ko04137 ko04140 map04137 map04140
Pfam Domains
Protein Families
WD40

Protein Analysis

793

Amino Acids

85.85

Weight (kDa)

6.0

Isoelectric Point (pI)

48.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 17
AasI GACNNNNNNGTC 1 cut(s) 1884
AccB1I GGYRCC 1 cut(s) 1929
AccB7I CCANNNNNTGG 1 cut(s) 1565
AccI GTMKAC 2 cut(s) 2092, 2169
AccII CGCG 1 cut(s) 555
AciI CCGC 7 cut(s) 160, 914, 1156, 1538, 1546, 1676, 1759
AclWI GGATC 5 cut(s) 510, 556, 609, 923, 1307
AcoI YGGCCR 1 cut(s) 430
AcuI CTGAAG 2 cut(s) 753, 1122
AcyI GRCGYC 1 cut(s) 2095
AdeI CACNNNGTG 2 cut(s) 371, 1817
AfaI GTAC 7 cut(s) 150, 290, 1077, 1251, 2004, 2202, 2298
AfiI CCNNNNNNNGG 5 cut(s) 201, 1565, 1926, 2252, 2283
AflII CTTAAG 1 cut(s) 269
AflIII ACRYGT 1 cut(s) 145
AgsI TTSAA 7 cut(s) 257, 682, 972, 999, 1170, 1266, 2046
AjiI CACGTC 1 cut(s) 2064
AjnI CCWGG 1 cut(s) 1480
AjuI GAANNNNNNNTTGG 4 cut(s) 1359, 1391, 1857, 1889
AleI CACNNNNGTG 1 cut(s) 87
AloI GAACNNNNNNTCC 2 cut(s) 175, 207
Alw21I GWGCWC 4 cut(s) 1738, 1804, 2073, 2317
Alw26I GTCTC 4 cut(s) 1055, 1169, 2016, 2129
AlwI GGATC 5 cut(s) 510, 556, 609, 923, 1307
AlwNI CAGNNNCTG 2 cut(s) 1565, 1673
Ama87I CYCGRG 1 cut(s) 2013
AoxI GGCC 4 cut(s) 203, 238, 430, 959
AspS9I GGNCC 5 cut(s) 26, 203, 959, 1891, 2336
AsuC2I CCSGG 1 cut(s) 801
AsuHPI GGTGA 5 cut(s) 383, 707, 1115, 1803, 2049
AsuII TTCGAA 1 cut(s) 1094
AvaI CYCGRG 1 cut(s) 2013
AvaII GGWCC 3 cut(s) 26, 1891, 2336
BaeI ACNNNNGTAYC 4 cut(s) 1994, 2027, 2288, 2321
BalI TGGCCA 1 cut(s) 432
BanI GGYRCC 1 cut(s) 1929
BarI GAAGNNNNNNTAC 2 cut(s) 1033, 1065
BauI CACGAG 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 898
Bbv12I GWGCWC 4 cut(s) 1738, 1804, 2073, 2317
BbvCI CCTCAGC 1 cut(s) 747
BccI CCATC 8 cut(s) 338, 826, 1031, 1397, 1595, 1902, 2123, 2303
BceAI ACGGC 1 cut(s) 52
BciT130I CCWGG 1 cut(s) 1482
BcnI CCSGG 1 cut(s) 801
BcoDI GTCTC 4 cut(s) 1055, 1169, 2016, 2129
BfaI CTAG 9 cut(s) 135, 489, 608, 788, 852, 1371, 1419, 1926, 2208
BfmI CTRYAG 3 cut(s) 85, 1665, 2170
BfrI CTTAAG 1 cut(s) 269
BglI GCCNNNNNGGC 1 cut(s) 405
BglII AGATCT 1 cut(s) 1514
BlpI GCTNAGC 2 cut(s) 1614, 1700
BmcAI AGTACT 2 cut(s) 290, 2202
Bme1390I CCNGG 2 cut(s) 801, 1482
Bme18I GGWCC 3 cut(s) 26, 1891, 2336
BmeT110I CYCGRG 1 cut(s) 2013
BmgBI CACGTC 1 cut(s) 2064
BmgT120I GGNCC 5 cut(s) 26, 203, 959, 1891, 2336
BmiI GGNNCC 6 cut(s) 27, 193, 461, 1205, 1931, 2275
BmrFI CCNGG 2 cut(s) 801, 1482
BmrI ACTGGG 1 cut(s) 1365
BmuI ACTGGG 1 cut(s) 1365
BpiI GAAGAC 1 cut(s) 898
BplI GAGNNNNNCTC 2 cut(s) 647, 679
BpmI CTGGAG 3 cut(s) 651, 1521, 2285
Bpu10I CCTNAGC 2 cut(s) 747, 2291
Bpu1102I GCTNAGC 2 cut(s) 1614, 1700
Bpu14I TTCGAA 1 cut(s) 1094
BpuEI CTTGAG 2 cut(s) 2000, 2183
BpuMI CCSGG 1 cut(s) 801
BsaBI GATNNNNATC 2 cut(s) 78, 561
BsaHI GRCGYC 1 cut(s) 2095
BsaJI CCNNGG 5 cut(s) 311, 446, 1342, 2098, 2277
BsaWI WCCGGW 1 cut(s) 1252
BsaXI ACNNNNNCTCC 8 cut(s) 1036, 1066, 1195, 1225, 1323, 1353, 2250, 2280
Bsc4I CCNNNNNNNGG 5 cut(s) 201, 1565, 1926, 2252, 2283
Bse1I ACTGG 7 cut(s) 193, 409, 1360, 1636, 1662, 2050, 2302
Bse3DI GCAATG 1 cut(s) 1482
Bse8I GATNNNNATC 2 cut(s) 78, 561
BseBI CCWGG 1 cut(s) 1482
BseDI CCNNGG 5 cut(s) 311, 446, 1342, 2098, 2277
BseGI GGATG 6 cut(s) 472, 1042, 1576, 1916, 2224, 2242
BseJI GATNNNNATC 2 cut(s) 78, 561
BseLI CCNNNNNNNGG 5 cut(s) 201, 1565, 1926, 2252, 2283
BseMI GCAATG 1 cut(s) 1482
BseMII CTCAG 4 cut(s) 738, 1628, 1953, 2058
BseNI ACTGG 7 cut(s) 193, 409, 1360, 1636, 1662, 2050, 2302
BseRI GAGGAG 3 cut(s) 187, 297, 1997
BsgI GTGCAG 2 cut(s) 2013, 2232
Bsh1236I CGCG 1 cut(s) 555
Bsh1285I CGRYCG 1 cut(s) 38
BshFI GGCC 4 cut(s) 205, 240, 432, 961
BshNI GGYRCC 1 cut(s) 1929
BsiEI CGRYCG 1 cut(s) 38
BsiHKAI GWGCWC 4 cut(s) 1738, 1804, 2073, 2317
BsiHKCI CYCGRG 1 cut(s) 2013
BsiSI CCGG 2 cut(s) 801, 1253
BslFI GGGAC 1 cut(s) 39
BslI CCNNNNNNNGG 5 cut(s) 201, 1565, 1926, 2252, 2283
BsmAI GTCTC 4 cut(s) 1055, 1169, 2016, 2129
BsmFI GGGAC 1 cut(s) 39
BsnI GGCC 4 cut(s) 205, 240, 432, 961
BsoBI CYCGRG 1 cut(s) 2013
Bsp119I TTCGAA 1 cut(s) 1094
Bsp1286I GDGCHC 4 cut(s) 1738, 1804, 2073, 2317
Bsp143I GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
Bsp1720I GCTNAGC 2 cut(s) 1614, 1700
Bsp19I CCATGG 1 cut(s) 2098
Bsp68I TCGCGA 1 cut(s) 555
BspACI CCGC 7 cut(s) 160, 914, 1156, 1538, 1546, 1676, 1759
BspANI GGCC 4 cut(s) 205, 240, 432, 961
BspCNI CTCAG 4 cut(s) 739, 1627, 1952, 2059
BspFNI CGCG 1 cut(s) 555
BspHI TCATGA 2 cut(s) 505, 1399
BspLI GGNNCC 6 cut(s) 27, 193, 461, 1205, 1931, 2275
BspMAI CTGCAG 2 cut(s) 89, 1669
BspPI GGATC 5 cut(s) 510, 556, 609, 923, 1307
BspT104I TTCGAA 1 cut(s) 1094
BspT107I GGYRCC 1 cut(s) 1929
BspTI CTTAAG 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 1482
BsrI ACTGG 7 cut(s) 193, 409, 1360, 1636, 1662, 2050, 2302
BssECI CCNNGG 5 cut(s) 311, 446, 1342, 2098, 2277
BssMI GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
BssNI GRCGYC 1 cut(s) 2095
BssSI CACGAG 1 cut(s) 222
BssT1I CCWWGG 5 cut(s) 311, 446, 1342, 2098, 2277
Bst2BI CACGAG 1 cut(s) 222
Bst2UI CCWGG 1 cut(s) 1482
Bst4CI ACNGT 6 cut(s) 39, 293, 382, 1138, 1693, 2158
Bst6I CTCTTC 2 cut(s) 772, 2112
BstACI GRCGYC 1 cut(s) 2095
BstAFI CTTAAG 1 cut(s) 269
BstAPI GCANNNNNTGC 2 cut(s) 581, 1673
BstBI TTCGAA 1 cut(s) 1094
BstC8I GCNNGC 5 cut(s) 963, 980, 1846, 1850, 2236
BstDEI CTNAG 9 cut(s) 207, 698, 747, 863, 1614, 1700, 1939, 2067, 2291
BstDSI CCRYGG 1 cut(s) 2098
BstEII GGTNACC 1 cut(s) 371
BstF5I GGATG 6 cut(s) 472, 1042, 1576, 1916, 2224, 2242
BstFNI CGCG 1 cut(s) 555
BstKTI GATC 9 cut(s) 13, 46, 505, 551, 604, 760, 931, 1315, 1517
BstMAI GTCTC 4 cut(s) 1055, 1169, 2016, 2129
BstMBI GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
BstMCI CGRYCG 1 cut(s) 38
BstNI CCWGG 1 cut(s) 1482
BstNSI RCATGY 4 cut(s) 149, 982, 1848, 1852
BstPI GGTNACC 1 cut(s) 371
BstSCI CCNGG 2 cut(s) 799, 1480
BstSFI CTRYAG 3 cut(s) 85, 1665, 2170
BstUI CGCG 1 cut(s) 555
BstV2I GAAGAC 1 cut(s) 898
BstX2I RGATCY 4 cut(s) 548, 601, 1312, 1514
BstXI CCANNNNNNTGG 2 cut(s) 1323, 2309
BstYI RGATCY 4 cut(s) 548, 601, 1312, 1514
BsuRI GGCC 4 cut(s) 205, 240, 432, 961
BtgI CCRYGG 1 cut(s) 2098
BtrI CACGTC 1 cut(s) 2064
BtsCI GGATG 6 cut(s) 472, 1042, 1576, 1916, 2224, 2242
BtsI GCAGTG 5 cut(s) 82, 94, 711, 953, 1795
BtsIMutI CAGTG 9 cut(s) 82, 94, 378, 711, 953, 1655, 1689, 1795, 2154
BtuMI TCGCGA 1 cut(s) 555
Cac8I GCNNGC 5 cut(s) 963, 980, 1846, 1850, 2236
CaiI CAGNNNCTG 2 cut(s) 1565, 1673
CciI TCATGA 2 cut(s) 505, 1399
Cfr13I GGNCC 5 cut(s) 26, 203, 959, 1891, 2336
CseI GACGC 2 cut(s) 848, 2103
Csp6I GTAC 7 cut(s) 149, 289, 1076, 1250, 2003, 2201, 2297
CviQI GTAC 7 cut(s) 149, 289, 1076, 1250, 2003, 2201, 2297
DdeI CTNAG 9 cut(s) 207, 698, 747, 863, 1614, 1700, 1939, 2067, 2291
DpnI GATC 9 cut(s) 12, 45, 504, 550, 603, 759, 930, 1314, 1516
DpnII GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
DraI TTTAAA 2 cut(s) 528, 1587
DraIII CACNNNGTG 2 cut(s) 371, 1817
DrdI GACNNNNNNGTC 1 cut(s) 1884
DseDI GACNNNNNNGTC 1 cut(s) 1884
EaeI YGGCCR 1 cut(s) 430
Eam1104I CTCTTC 2 cut(s) 772, 2112
EarI CTCTTC 2 cut(s) 772, 2112
Eco130I CCWWGG 5 cut(s) 311, 446, 1342, 2098, 2277
Eco47I GGWCC 3 cut(s) 26, 1891, 2336
Eco57I CTGAAG 2 cut(s) 753, 1122
Eco88I CYCGRG 1 cut(s) 2013
Eco91I GGTNACC 1 cut(s) 371
EcoO109I RGGNCCY 1 cut(s) 26
EcoO65I GGTNACC 1 cut(s) 371
EcoRII CCWGG 1 cut(s) 1480
EcoT14I CCWWGG 5 cut(s) 311, 446, 1342, 2098, 2277
EcoT22I ATGCAT 1 cut(s) 1850
ErhI CCWWGG 5 cut(s) 311, 446, 1342, 2098, 2277
FalI AAGNNNNNCTT 2 cut(s) 2274, 2306
FaqI GGGAC 1 cut(s) 39
FblI GTMKAC 2 cut(s) 2092, 2169
FokI GGATG 6 cut(s) 459, 1049, 1583, 1903, 2229, 2231
FspBI CTAG 9 cut(s) 135, 489, 608, 788, 852, 1371, 1419, 1926, 2208
GsuI CTGGAG 3 cut(s) 651, 1521, 2285
HaeIII GGCC 4 cut(s) 205, 240, 432, 961
HapII CCGG 2 cut(s) 801, 1253
HgaI GACGC 2 cut(s) 848, 2103
Hin1I GRCGYC 1 cut(s) 2095
HincII GTYRAC 3 cut(s) 318, 1353, 2093
HindII GTYRAC 3 cut(s) 318, 1353, 2093
HindIII AAGCTT 2 cut(s) 1216, 2288
HinfI GANTC 9 cut(s) 170, 263, 764, 773, 1166, 1232, 1562, 1632, 1901
HpaI GTTAAC 1 cut(s) 1353
HpaII CCGG 2 cut(s) 801, 1253
HphI GGTGA 5 cut(s) 383, 707, 1115, 1803, 2049
Hpy166II GTNNAC 6 cut(s) 318, 695, 1353, 1523, 2093, 2170
Hpy188I TCNGA 9 cut(s) 10, 48, 73, 538, 772, 1642, 2024, 2068, 2182
Hpy8I GTNNAC 6 cut(s) 318, 695, 1353, 1523, 2093, 2170
Hpy99I CGWCG 1 cut(s) 2097
HpyAV CCTTC 4 cut(s) 39, 150, 251, 2276
HpyCH4III ACNGT 6 cut(s) 39, 293, 382, 1138, 1693, 2158
HpyCH4IV ACGT 3 cut(s) 235, 1210, 2063
HpyF3I CTNAG 9 cut(s) 207, 698, 747, 863, 1614, 1700, 1939, 2067, 2291
HpySE526I ACGT 3 cut(s) 235, 1210, 2063
Hsp92I GRCGYC 1 cut(s) 2095
KspAI GTTAAC 1 cut(s) 1353
Kzo9I GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
LmnI GCTCC 4 cut(s) 655, 733, 1203, 1327
MaeI CTAG 9 cut(s) 135, 489, 608, 788, 852, 1371, 1419, 1926, 2208
MaeII ACGT 3 cut(s) 235, 1210, 2063
MaeIII GTNAC 5 cut(s) 264, 371, 985, 1151, 1680
MalI GATC 9 cut(s) 12, 45, 504, 550, 603, 759, 930, 1314, 1516
MboI GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
MboII GAAGA 8 cut(s) 165, 360, 759, 898, 1115, 1268, 1524, 2099
MflI RGATCY 4 cut(s) 548, 601, 1312, 1514
MhlI GDGCHC 4 cut(s) 1738, 1804, 2073, 2317
MlsI TGGCCA 1 cut(s) 432
MluCI AATT 7 cut(s) 390, 483, 1117, 1225, 1644, 1908, 2341
MluNI TGGCCA 1 cut(s) 432
MlyI GAGTC 2 cut(s) 272, 758
MmeI TCCRAC 1 cut(s) 2314
Mox20I TGGCCA 1 cut(s) 432
Mph1103I ATGCAT 1 cut(s) 1850
MscI TGGCCA 1 cut(s) 432
MslI CAYNNNNRTG 4 cut(s) 87, 538, 852, 1128
Msp20I TGGCCA 1 cut(s) 432
MspA1I CMGCKG 2 cut(s) 411, 1673
MspCI CTTAAG 1 cut(s) 269
MspI CCGG 2 cut(s) 801, 1253
MspR9I CCNGG 2 cut(s) 801, 1482
MvaI CCWGG 1 cut(s) 1482
MvnI CGCG 1 cut(s) 555
NciI CCSGG 1 cut(s) 801
NcoI CCATGG 1 cut(s) 2098
NdeII GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
NlaIV GGNNCC 6 cut(s) 27, 193, 461, 1205, 1931, 2275
NmuCI GTSAC 4 cut(s) 264, 371, 985, 1151
NruI TCGCGA 1 cut(s) 555
NsiI ATGCAT 1 cut(s) 1850
NspI RCATGY 4 cut(s) 149, 982, 1848, 1852
NspV TTCGAA 1 cut(s) 1094
OliI CACNNNNGTG 1 cut(s) 87
PaeI GCATGC 3 cut(s) 982, 1848, 1852
PagI TCATGA 2 cut(s) 505, 1399
PciI ACATGT 1 cut(s) 145
PfeI GAWTC 7 cut(s) 170, 773, 1166, 1232, 1562, 1632, 1901
PflMI CCANNNNNTGG 1 cut(s) 1565
PleI GAGTC 2 cut(s) 271, 758
PpsI GAGTC 2 cut(s) 271, 758
PpuMI RGGWCCY 1 cut(s) 26
PscI ACATGT 1 cut(s) 145
PsiI TTATAA 1 cut(s) 17
Psp5II RGGWCCY 1 cut(s) 26
Psp6I CCWGG 1 cut(s) 1480
PspEI GGTNACC 1 cut(s) 371
PspGI CCWGG 1 cut(s) 1480
PspN4I GGNNCC 6 cut(s) 27, 193, 461, 1205, 1931, 2275
PspPI GGNCC 5 cut(s) 26, 203, 959, 1891, 2336
PspPPI RGGWCCY 1 cut(s) 26
PstI CTGCAG 2 cut(s) 89, 1669
PstNI CAGNNNCTG 2 cut(s) 1565, 1673
PsuI RGATCY 4 cut(s) 548, 601, 1312, 1514
PvuII CAGCTG 2 cut(s) 411, 1673
RruI TCGCGA 1 cut(s) 555
RsaI GTAC 7 cut(s) 150, 290, 1077, 1251, 2004, 2202, 2298
RsaNI GTAC 7 cut(s) 149, 289, 1076, 1250, 2003, 2201, 2297
RseI CAYNNNNRTG 4 cut(s) 87, 538, 852, 1128
SalI GTCGAC 1 cut(s) 2091
Sau3AI GATC 9 cut(s) 10, 43, 502, 548, 601, 757, 928, 1312, 1514
Sau96I GGNCC 5 cut(s) 26, 203, 959, 1891, 2336
ScaI AGTACT 2 cut(s) 290, 2202
SchI GAGTC 2 cut(s) 272, 758
ScrFI CCNGG 2 cut(s) 801, 1482
SduI GDGCHC 4 cut(s) 1738, 1804, 2073, 2317
SfcI CTRYAG 3 cut(s) 85, 1665, 2170
SfuI TTCGAA 1 cut(s) 1094
SinI GGWCC 3 cut(s) 26, 1891, 2336
SmiMI CAYNNNNRTG 4 cut(s) 87, 538, 852, 1128
SmlI CTYRAG 3 cut(s) 269, 1979, 2162
SmoI CTYRAG 3 cut(s) 269, 1979, 2162
SphI GCATGC 3 cut(s) 982, 1848, 1852
Sse9I AATT 7 cut(s) 390, 483, 1117, 1225, 1644, 1908, 2341
SsiI CCGC 7 cut(s) 160, 914, 1156, 1538, 1546, 1676, 1759
SspMI CTAG 9 cut(s) 135, 489, 608, 788, 852, 1371, 1419, 1926, 2208
StyD4I CCNGG 2 cut(s) 799, 1480
StyI CCWWGG 5 cut(s) 311, 446, 1342, 2098, 2277
TaaI ACNGT 6 cut(s) 39, 293, 382, 1138, 1693, 2158
TaiI ACGT 3 cut(s) 238, 1213, 2066
TaqI TCGA 6 cut(s) 42, 362, 565, 1094, 1382, 2092
TasI AATT 7 cut(s) 390, 483, 1117, 1225, 1644, 1908, 2341
TatI WGTACW 2 cut(s) 288, 2200
TauI GCSGC 2 cut(s) 916, 1761
TfiI GAWTC 7 cut(s) 170, 773, 1166, 1232, 1562, 1632, 1901
TscAI CASTG 9 cut(s) 89, 94, 385, 711, 953, 1662, 1696, 1795, 2161
TseFI GTSAC 4 cut(s) 264, 371, 985, 1151
Tsp45I GTSAC 4 cut(s) 264, 371, 985, 1151
TspDTI ATGAA 7 cut(s) 17, 237, 522, 578, 836, 1059, 2231
TspGWI ACGGA 2 cut(s) 454, 1877
TspRI CASTG 9 cut(s) 89, 94, 385, 711, 953, 1662, 1696, 1795, 2161
Van91I CCANNNNNTGG 1 cut(s) 1565
Vha464I CTTAAG 1 cut(s) 269
VpaK11BI GGWCC 3 cut(s) 26, 1891, 2336
XceI RCATGY 4 cut(s) 149, 982, 1848, 1852
XcmI CCANNNNNNNNNTGG 1 cut(s) 1901
XmiI GTMKAC 2 cut(s) 2092, 2169
XspI CTAG 9 cut(s) 135, 489, 608, 788, 852, 1371, 1419, 1926, 2208
ZrmI AGTACT 2 cut(s) 290, 2202
Zsp2I ATGCAT 1 cut(s) 1850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.