Rorug06G0178000

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001434
Physical Location & Seq
Forward (+)
28123267 .. 28125778
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0178000.1

Sequence Viewer

Length: 1539 bp
ATGGCAGAAGTAGTGATCCTTCTCTTCCTTTCAGTGGTCACCCTGCTAAGCTTTCCGTCTACAAAAGCCTACTACCTCTACCATATCTGCCCCAACACCACCGTCTTCACCCCAAACTCTACCTTCCAGTCCAACCTCAACCACCTCCTCTCTACTCTCTCCTCCAACGCCACGCGCACCGGCTTCTACAACGCCACCTCCGGCCGTACCCCTAACGACACGGTCTACGGCCTCTTCCTCTGCCGCGGTGACGTCACCACCACCACTTGCAAGTCCTGCGTGACCACCGCAACCTCCGAGGTCGTGCAGCGCTGCCCGGTCGAGAAAGAGGTTGTGATATGGTACGATGACTGCATGCTACGCTACTCCAACAAGTCCTTCTTCTCTGTCGAAGCCGAGTCGCCGAAGGTGTCCCTGTTGAACACCCAAAACGTCAGCATCAGCATCGAACCGAACCGGTTCAGCCAGGTTTTGGCGAGCTTGACGGAGGTGGCCACGGCGGCTGCGAACAGCAGCTATAAGTTCGCGACGAGAGAGGTGAACATCACGGGGTTGATTAGCTTGTACAGTTTGGAGCAGTGCACGCAGGACTTGTCTAGTTCTGATTGCAATTGGTGTCTTGTACGAGCCATAGCGGAGTTGCCGACTTGCTGCAGCCGGAAGCAAGGAGGACGAGTTCTGTATCCGAGTTGTAATGTTAGGTATGAACTTTATCCCTTTTATAACTCGACGTCAGCACTGGCGCCGGCGCCAGGGGCTCGGCCTCTTTCTCCGCCAAGCTCAGTGACGAAAGGAAAAAGTAAACTCTCAGCCATAGTCATTCCTAGCATTCTTGCTCCTGTTGCTCTCTCTGTGCTAGTAGTGGTTGTGGCCAGATGTTTCATTTGCAAATTAAAAAGAGCCAAACGACAACAAAATGAAGCCGAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAACTGTCGAAGCTGCCACAAAAAAGTTTTCTACGGATAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGGACTAGAAATAGCTGTGAAGAGGCTGTCAAAAAGCTCTGGACAAGGTGTACGAGAGTTTAAGAACGAGGTTTTATTGGTAGCAAAGCTTCAATACAGGAATCTCGTAAAGCTTCTAGGGTTTTGCTTGGAAGGAGAAGAAACACTACTTGTCTACGAATATGTGCCCAACAAAAGTCTTGATTATTTTCTATTTGAAGCCAAAAAAAGAGAACAACTGGATTGGTCAAGACGCTGCACCATAATAGGAGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCTAGGCTTCGTGTTATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCTAATATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATTGGTTACATGGCTCCAGAATATGCTATGGAGGGATTTGTTAAACAGCGACAAGCGTGGCCCGTGGCTCACCATTGTACCGATACTGTCCCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000422 GO:0000423 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005856 GO:0005929 GO:0005930 GO:0006914 GO:0006950 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009790 GO:0009792 GO:0009888 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010506 GO:0010508 GO:0010562 GO:0010656 GO:0010660 GO:0010662 GO:0010664 GO:0010665 GO:0010667 GO:0010941 GO:0016043 GO:0016236 GO:0019216 GO:0019220 GO:0019222 GO:0019899 GO:0021915 GO:0022411 GO:0022607 GO:0030139 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031625 GO:0031982 GO:0032501 GO:0032502 GO:0032838 GO:0033554 GO:0033674 GO:0035295 GO:0042127 GO:0042325 GO:0042327 GO:0042981 GO:0042995 GO:0043009 GO:0043066 GO:0043067 GO:0043069 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043523 GO:0043524 GO:0043549 GO:0043550 GO:0043551 GO:0043552 GO:0044085 GO:0044093 GO:0044237 GO:0044248 GO:0044389 GO:0044422 GO:0044424 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045335 GO:0045834 GO:0045937 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051174 GO:0051338 GO:0051347 GO:0051716 GO:0060429 GO:0060548 GO:0061726 GO:0061912 GO:0061919 GO:0065007 GO:0065009 GO:0070925 GO:0071840 GO:0080090 GO:0090218 GO:0097014 GO:0097708 GO:0098780 GO:0099568 GO:0120025 GO:0120038 GO:1901214 GO:1901215 GO:1903008 GO:1903725 GO:1903727 GO:1905037
KEGG Pathways
Metabolic & Signaling
ko04137 ko04140 map04137 map04140
Pfam Domains
Protein Families
WD40

Protein Analysis

512

Amino Acids

56.73

Weight (kDa)

8.63

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 30 - 125 3e-29 Salt stress response/antifungal
Stress-antifung PF01657 153 - 237 8.2e-11 Salt stress response/antifungal
Pkinase PF00069 333 - 481 6.3e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 334 - 500 1.9e-33 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 723
AatII GACGTC 2 cut(s) 255, 734
AccB1I GGYRCC 2 cut(s) 742, 748
AccB7I CCANNNNNTGG 1 cut(s) 472
AccI GTMKAC 3 cut(s) 59, 225, 1212
AccII CGCG 3 cut(s) 175, 246, 527
AciI CCGC 7 cut(s) 244, 246, 288, 500, 635, 773, 1023
AclWI GGATC 1 cut(s) 10
AcoI YGGCCR 3 cut(s) 202, 492, 870
AcsI RAATTY 1 cut(s) 1416
AcyI GRCGYC 4 cut(s) 252, 731, 743, 749
AfaI GTAC 6 cut(s) 208, 344, 566, 624, 1110, 1519
AfeI AGCGCT 1 cut(s) 311
AfiI CCNNNNNNNGG 3 cut(s) 34, 472, 752
AflIII ACRYGT 1 cut(s) 1008
AgeI ACCGGT 1 cut(s) 456
AgsI TTSAA 6 cut(s) 421, 947, 1042, 1151, 1256, 1375
AjnI CCWGG 2 cut(s) 465, 751
AjuI GAANNNNNNNTTGG 4 cut(s) 362, 394, 1011, 1043
AloI GAACNNNNNNTCC 2 cut(s) 660, 692
Alw21I GWGCWC 1 cut(s) 584
Alw44I GTGCAC 1 cut(s) 580
AlwI GGATC 1 cut(s) 10
Ama87I CYCGRG 1 cut(s) 1317
Aor51HI AGCGCT 1 cut(s) 311
AoxI GGCC 6 cut(s) 202, 229, 492, 761, 870, 1499
ApaLI GTGCAC 1 cut(s) 580
ApeKI GCWGC 8 cut(s) 307, 312, 503, 513, 651, 654, 980, 1293
ApoI RAATTY 1 cut(s) 1416
AsiGI ACCGGT 1 cut(s) 456
Asp700I GAANNNNTTC 1 cut(s) 458
AspLEI GCGC 4 cut(s) 177, 312, 745, 751
AspS9I GGNCC 1 cut(s) 1500
AsuC2I CCSGG 1 cut(s) 317
AsuHPI GGTGA 7 cut(s) 31, 100, 247, 260, 550, 1028, 1502
AsuNHI GCTAGC 1 cut(s) 1379
AvaI CYCGRG 1 cut(s) 1317
BaeGI GKGCMC 2 cut(s) 584, 1227
BaeI ACNNNNGTAYC 2 cut(s) 1501, 1534
BalI TGGCCA 2 cut(s) 494, 872
BanI GGYRCC 2 cut(s) 742, 748
BanII GRGCYC 1 cut(s) 760
BarI GAAGNNNNNNTAC 5 cut(s) 35, 1131, 1163, 1188, 1220
BbsI GAAGAC 1 cut(s) 97
Bbv12I GWGCWC 1 cut(s) 584
BbvI GCAGC 8 cut(s) 299, 319, 490, 525, 638, 666, 967, 1280
BceAI ACGGC 3 cut(s) 189, 244, 513
BcgI CGANNNNNNTGC 2 cut(s) 427, 461
BciT130I CCWGG 2 cut(s) 467, 753
BciVI GTATCC 1 cut(s) 693
BcnI CCSGG 1 cut(s) 317
BfaI CTAG 7 cut(s) 597, 825, 857, 1064, 1175, 1347, 1380
BfmI CTRYAG 1 cut(s) 652
BfoI RGCGCY 3 cut(s) 313, 746, 752
BfuI GTATCC 1 cut(s) 693
BglI GCCNNNNNGGC 1 cut(s) 500
BlpI GCTNAGC 1 cut(s) 47
Bme1390I CCNGG 3 cut(s) 317, 467, 753
BmeT110I CYCGRG 1 cut(s) 1317
BmgT120I GGNCC 1 cut(s) 1500
BmiI GGNNCC 3 cut(s) 744, 750, 1455
BmrFI CCNGG 3 cut(s) 317, 467, 753
BmsI GCATC 3 cut(s) 447, 453, 1387
BmtI GCTAGC 1 cut(s) 1383
BpiI GAAGAC 1 cut(s) 97
BplI GAGNNNNNCTC 2 cut(s) 1311, 1343
BpmI CTGGAG 1 cut(s) 1440
Bpu1102I GCTNAGC 1 cut(s) 47
BpuMI CCSGG 1 cut(s) 317
BsaHI GRCGYC 4 cut(s) 252, 731, 743, 749
BsaJI CCNNGG 5 cut(s) 244, 297, 495, 752, 1503
BsaWI WCCGGW 1 cut(s) 456
BsaXI ACNNNNNCTCC 4 cut(s) 182, 212, 660, 690
Bsc4I CCNNNNNNNGG 3 cut(s) 34, 472, 752
Bse118I RCCGGY 3 cut(s) 179, 456, 745
Bse1I ACTGG 3 cut(s) 127, 744, 1281
BseBI CCWGG 2 cut(s) 467, 753
BseDI CCNNGG 5 cut(s) 244, 297, 495, 752, 1503
BseGI GGATG 1 cut(s) 1402
BseLI CCNNNNNNNGG 3 cut(s) 34, 472, 752
BseMII CTCAG 2 cut(s) 795, 822
BseNI ACTGG 3 cut(s) 127, 744, 1281
BseRI GAGGAG 2 cut(s) 137, 151
BseSI GKGCMC 2 cut(s) 584, 1227
BseX3I CGGCCG 1 cut(s) 202
BseXI GCAGC 8 cut(s) 299, 319, 490, 525, 638, 666, 967, 1280
BsgI GTGCAG 2 cut(s) 326, 1279
Bsh1236I CGCG 3 cut(s) 175, 246, 527
Bsh1285I CGRYCG 2 cut(s) 205, 321
BshFI GGCC 6 cut(s) 204, 231, 494, 763, 872, 1501
BshNI GGYRCC 2 cut(s) 742, 748
BshTI ACCGGT 1 cut(s) 456
BsiEI CGRYCG 2 cut(s) 205, 321
BsiHKAI GWGCWC 1 cut(s) 584
BsiHKCI CYCGRG 1 cut(s) 1317
BsiSI CCGG 6 cut(s) 180, 201, 317, 457, 658, 746
BslFI GGGAC 2 cut(s) 397, 1514
BslI CCNNNNNNNGG 3 cut(s) 34, 472, 752
BsmFI GGGAC 2 cut(s) 397, 1514
BsmI GAATGC 1 cut(s) 828
BsnI GGCC 6 cut(s) 204, 231, 494, 763, 872, 1501
BsoBI CYCGRG 1 cut(s) 1317
Bsp1286I GDGCHC 3 cut(s) 584, 760, 1227
Bsp1407I TGTACA 1 cut(s) 564
Bsp143I GATC 1 cut(s) 15
Bsp1720I GCTNAGC 1 cut(s) 47
Bsp68I TCGCGA 1 cut(s) 527
BspACI CCGC 7 cut(s) 244, 246, 288, 500, 635, 773, 1023
BspANI GGCC 6 cut(s) 204, 231, 494, 763, 872, 1501
BspCNI CTCAG 2 cut(s) 794, 821
BspFNI CGCG 3 cut(s) 175, 246, 527
BspHI TCATGA 1 cut(s) 1336
BspLI GGNNCC 3 cut(s) 744, 750, 1455
BspMAI CTGCAG 1 cut(s) 656
BspOI GCTAGC 1 cut(s) 1383
BspPI GGATC 1 cut(s) 10
BspT107I GGYRCC 2 cut(s) 742, 748
BsrFI RCCGGY 3 cut(s) 179, 456, 745
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 3 cut(s) 127, 744, 1281
BssAI RCCGGY 3 cut(s) 179, 456, 745
BssECI CCNNGG 5 cut(s) 244, 297, 495, 752, 1503
BssMI GATC 1 cut(s) 15
BssNI GRCGYC 4 cut(s) 252, 731, 743, 749
Bst2UI CCWGG 2 cut(s) 467, 753
Bst4CI ACNGT 6 cut(s) 103, 223, 569, 943, 973, 1528
Bst6I CTCTTC 3 cut(s) 29, 239, 1073
BstACI GRCGYC 4 cut(s) 252, 731, 743, 749
BstAPI GCANNNNNTGC 1 cut(s) 276
BstAUI TGTACA 1 cut(s) 564
BstC8I GCNNGC 5 cut(s) 356, 478, 584, 747, 1381
BstDEI CTNAG 3 cut(s) 47, 781, 808
BstDSI CCRYGG 3 cut(s) 244, 495, 1503
BstEII GGTNACC 1 cut(s) 37
BstF5I GGATG 1 cut(s) 1402
BstFNI CGCG 3 cut(s) 175, 246, 527
BstH2I RGCGCY 3 cut(s) 313, 746, 752
BstHHI GCGC 4 cut(s) 177, 312, 745, 751
BstKTI GATC 1 cut(s) 18
BstMBI GATC 1 cut(s) 15
BstMCI CGRYCG 2 cut(s) 205, 321
BstMWI GCNNNNNNNGC 6 cut(s) 276, 360, 500, 583, 755, 842
BstNI CCWGG 2 cut(s) 467, 753
BstNSI RCATGY 2 cut(s) 358, 1012
BstPI GGTNACC 1 cut(s) 37
BstSCI CCNGG 3 cut(s) 315, 465, 751
BstSFI CTRYAG 1 cut(s) 652
BstSLI GKGCMC 2 cut(s) 584, 1227
BstUI CGCG 3 cut(s) 175, 246, 527
BstV1I GCAGC 8 cut(s) 299, 319, 490, 525, 638, 666, 967, 1280
BstV2I GAAGAC 1 cut(s) 97
BstZI CGGCCG 1 cut(s) 202
BsuI GTATCC 1 cut(s) 693
BsuRI GGCC 6 cut(s) 204, 231, 494, 763, 872, 1501
BtgI CCRYGG 3 cut(s) 244, 495, 1503
BtsCI GGATG 1 cut(s) 1402
BtsI GCAGTG 1 cut(s) 584
BtsIMutI CAGTG 4 cut(s) 39, 584, 737, 789
BtuMI TCGCGA 1 cut(s) 527
Cac8I GCNNGC 5 cut(s) 356, 478, 584, 747, 1381
CciI TCATGA 1 cut(s) 1336
CfoI GCGC 4 cut(s) 177, 312, 745, 751
Cfr10I RCCGGY 3 cut(s) 179, 456, 745
Cfr13I GGNCC 1 cut(s) 1500
Cfr42I CCGCGG 1 cut(s) 247
CseI GACGC 1 cut(s) 1299
Csp6I GTAC 6 cut(s) 207, 343, 565, 623, 1109, 1518
CspAI ACCGGT 1 cut(s) 456
CviAII CATG 4 cut(s) 355, 1009, 1337, 1450
CviQI GTAC 6 cut(s) 207, 343, 565, 623, 1109, 1518
DdeI CTNAG 3 cut(s) 47, 781, 808
DinI GGCGCC 2 cut(s) 744, 750
DpnI GATC 1 cut(s) 17
DpnII GATC 1 cut(s) 15
EaeI YGGCCR 3 cut(s) 202, 492, 870
EagI CGGCCG 1 cut(s) 202
Eam1104I CTCTTC 3 cut(s) 29, 239, 1073
EarI CTCTTC 3 cut(s) 29, 239, 1073
EciI GGCGGA 2 cut(s) 762, 1038
EclXI CGGCCG 1 cut(s) 202
Eco24I GRGCYC 1 cut(s) 760
Eco47III AGCGCT 1 cut(s) 311
Eco52I CGGCCG 1 cut(s) 202
Eco88I CYCGRG 1 cut(s) 1317
Eco91I GGTNACC 1 cut(s) 37
EcoO65I GGTNACC 1 cut(s) 37
EcoRII CCWGG 2 cut(s) 465, 751
EcoT38I GRGCYC 1 cut(s) 760
EgeI GGCGCC 2 cut(s) 744, 750
EheI GGCGCC 2 cut(s) 744, 750
FaeI CATG 4 cut(s) 358, 1012, 1340, 1453
FalI AAGNNNNNCTT 2 cut(s) 365, 397
FaqI GGGAC 2 cut(s) 397, 1514
FatI CATG 4 cut(s) 354, 1008, 1336, 1449
FblI GTMKAC 3 cut(s) 59, 225, 1212
FokI GGATG 1 cut(s) 1409
FriOI GRGCYC 1 cut(s) 760
FspBI CTAG 7 cut(s) 597, 825, 857, 1064, 1175, 1347, 1380
GlaI GCGC 4 cut(s) 176, 311, 744, 750
GsuI CTGGAG 1 cut(s) 1440
HaeII RGCGCY 3 cut(s) 313, 746, 752
HaeIII GGCC 6 cut(s) 204, 231, 494, 763, 872, 1501
HapII CCGG 6 cut(s) 180, 201, 317, 457, 658, 746
HgaI GACGC 1 cut(s) 1299
HhaI GCGC 4 cut(s) 177, 312, 745, 751
Hin1I GRCGYC 4 cut(s) 252, 731, 743, 749
Hin1II CATG 4 cut(s) 358, 1012, 1340, 1453
Hin6I GCGC 4 cut(s) 175, 310, 743, 749
HinP1I GCGC 4 cut(s) 175, 310, 743, 749
HindIII AAGCTT 3 cut(s) 49, 1145, 1169
HinfI GANTC 7 cut(s) 398, 947, 1159, 1311, 1323, 1343, 1408
HpaII CCGG 6 cut(s) 180, 201, 317, 457, 658, 746
HphI GGTGA 7 cut(s) 31, 100, 247, 260, 550, 1028, 1502
Hpy166II GTNNAC 7 cut(s) 60, 226, 541, 582, 803, 1109, 1213
Hpy188I TCNGA 4 cut(s) 298, 604, 687, 1423
Hpy188III TCNNGA 8 cut(s) 322, 526, 1098, 1238, 1287, 1337, 1367, 1457
Hpy8I GTNNAC 7 cut(s) 60, 226, 541, 582, 803, 1109, 1213
Hpy99I CGWCG 2 cut(s) 532, 733
HpyAV CCTTC 6 cut(s) 29, 133, 388, 400, 1013, 1184
HpyCH4III ACNGT 6 cut(s) 103, 223, 569, 943, 973, 1528
HpyCH4IV ACGT 3 cut(s) 252, 432, 731
HpyCH4V TGCA 9 cut(s) 270, 307, 354, 582, 609, 654, 888, 955, 1296
HpyF10VI GCNNNNNNNGC 6 cut(s) 276, 360, 500, 583, 755, 842
HpyF3I CTNAG 3 cut(s) 47, 781, 808
HpySE526I ACGT 3 cut(s) 252, 432, 731
Hsp92I GRCGYC 4 cut(s) 252, 731, 743, 749
Hsp92II CATG 4 cut(s) 358, 1012, 1340, 1453
HspAI GCGC 4 cut(s) 175, 310, 743, 749
KasI GGCGCC 2 cut(s) 742, 748
KroI GCCGGC 1 cut(s) 745
KroNI GCCGGC 1 cut(s) 747
KspI CCGCGG 1 cut(s) 247
Kzo9I GATC 1 cut(s) 15
LmnI GCTCC 3 cut(s) 574, 841, 1459
Lsp1109I GCAGC 8 cut(s) 299, 319, 490, 525, 638, 666, 967, 1280
LweI GCATC 3 cut(s) 447, 453, 1387
MaeI CTAG 7 cut(s) 597, 825, 857, 1064, 1175, 1347, 1380
MaeII ACGT 3 cut(s) 252, 432, 731
MaeIII GTNAC 6 cut(s) 37, 248, 253, 280, 784, 1445
MalI GATC 1 cut(s) 17
MboI GATC 1 cut(s) 15
MboII GAAGA 8 cut(s) 16, 97, 226, 373, 1090, 1208, 1325, 1352
MfeI CAATTG 1 cut(s) 610
MhlI GDGCHC 3 cut(s) 584, 760, 1227
MlsI TGGCCA 2 cut(s) 494, 872
MluCI AATT 5 cut(s) 610, 890, 956, 1416, 1440
MluNI TGGCCA 2 cut(s) 494, 872
Mly113I GGCGCC 2 cut(s) 743, 749
MlyI GAGTC 1 cut(s) 407
MmeI TCCRAC 4 cut(s) 156, 189, 393, 1374
Mox20I TGGCCA 2 cut(s) 494, 872
MreI CGCCGGCG 1 cut(s) 745
MroNI GCCGGC 1 cut(s) 745
MroXI GAANNNNTTC 1 cut(s) 458
MscI TGGCCA 2 cut(s) 494, 872
MseI TTAA 4 cut(s) 893, 1119, 1482, 1537
Msp20I TGGCCA 2 cut(s) 494, 872
MspA1I CMGCKG 1 cut(s) 246
MspI CCGG 6 cut(s) 180, 201, 317, 457, 658, 746
MspR9I CCNGG 3 cut(s) 317, 467, 753
MunI CAATTG 1 cut(s) 610
Mva1269I GAATGC 1 cut(s) 828
MvaI CCWGG 2 cut(s) 467, 753
MvnI CGCG 3 cut(s) 175, 246, 527
MwoI GCNNNNNNNGC 6 cut(s) 276, 360, 500, 583, 755, 842
NaeI GCCGGC 1 cut(s) 747
NarI GGCGCC 2 cut(s) 743, 749
NciI CCSGG 1 cut(s) 317
NdeII GATC 1 cut(s) 15
NgoMIV GCCGGC 1 cut(s) 745
NheI GCTAGC 1 cut(s) 1379
NlaIII CATG 4 cut(s) 358, 1012, 1340, 1453
NlaIV GGNNCC 3 cut(s) 744, 750, 1455
NmeAIII GCCGAG 2 cut(s) 421, 739
NmuCI GTSAC 5 cut(s) 37, 248, 253, 280, 784
NruI TCGCGA 1 cut(s) 527
NspI RCATGY 2 cut(s) 358, 1012
PaeI GCATGC 1 cut(s) 358
PaeR7I CTCGAG 1 cut(s) 1317
PagI TCATGA 1 cut(s) 1336
PciI ACATGT 1 cut(s) 1008
PcsI WCGNNNNNNNCGW 1 cut(s) 503
PctI GAATGC 1 cut(s) 828
PdiI GCCGGC 1 cut(s) 747
PdmI GAANNNNTTC 1 cut(s) 458
PfeI GAWTC 6 cut(s) 947, 1159, 1311, 1323, 1343, 1408
PflFI GACNNNGTC 1 cut(s) 221
PflMI CCANNNNNTGG 1 cut(s) 472
PinAI ACCGGT 1 cut(s) 456
PleI GAGTC 1 cut(s) 406
PluTI GGCGCC 2 cut(s) 746, 752
PpsI GAGTC 1 cut(s) 406
PscI ACATGT 1 cut(s) 1008
PsiI TTATAA 1 cut(s) 723
Psp6I CCWGG 2 cut(s) 465, 751
PspEI GGTNACC 1 cut(s) 37
PspGI CCWGG 2 cut(s) 465, 751
PspN4I GGNNCC 3 cut(s) 744, 750, 1455
PspPI GGNCC 1 cut(s) 1500
PspXI VCTCGAGB 1 cut(s) 1317
PstI CTGCAG 1 cut(s) 656
PsyI GACNNNGTC 1 cut(s) 221
RruI TCGCGA 1 cut(s) 527
RsaI GTAC 6 cut(s) 208, 344, 566, 624, 1110, 1519
RsaNI GTAC 6 cut(s) 207, 343, 565, 623, 1109, 1518
SacII CCGCGG 1 cut(s) 247
SaqAI TTAA 4 cut(s) 893, 1119, 1482, 1537
Sau3AI GATC 1 cut(s) 15
Sau96I GGNCC 1 cut(s) 1500
SchI GAGTC 1 cut(s) 407
ScrFI CCNGG 3 cut(s) 317, 467, 753
SduI GDGCHC 3 cut(s) 584, 760, 1227
SfaNI GCATC 3 cut(s) 447, 453, 1387
SfcI CTRYAG 1 cut(s) 652
SfoI GGCGCC 2 cut(s) 744, 750
Sfr274I CTCGAG 1 cut(s) 1317
Sfr303I CCGCGG 1 cut(s) 247
SgrAI CRCCGGYG 1 cut(s) 745
SgrBI CCGCGG 1 cut(s) 247
SlaI CTCGAG 1 cut(s) 1317
SmlI CTYRAG 1 cut(s) 1317
SmoI CTYRAG 1 cut(s) 1317
SphI GCATGC 1 cut(s) 358
Sse9I AATT 5 cut(s) 610, 890, 956, 1416, 1440
SsiI CCGC 7 cut(s) 244, 246, 288, 500, 635, 773, 1023
SspDI GGCGCC 2 cut(s) 742, 748
SspMI CTAG 7 cut(s) 597, 825, 857, 1064, 1175, 1347, 1380
StyD4I CCNGG 3 cut(s) 315, 465, 751
TaaI ACNGT 6 cut(s) 103, 223, 569, 943, 973, 1528
TaiI ACGT 3 cut(s) 255, 435, 734
TaqI TCGA 6 cut(s) 321, 390, 447, 728, 975, 1318
TasI AATT 5 cut(s) 610, 890, 956, 1416, 1440
TatI WGTACW 1 cut(s) 564
TauI GCSGC 2 cut(s) 246, 503
TfiI GAWTC 6 cut(s) 947, 1159, 1311, 1323, 1343, 1408
Tru1I TTAA 4 cut(s) 893, 1119, 1482, 1537
Tru9I TTAA 4 cut(s) 893, 1119, 1482, 1537
TscAI CASTG 4 cut(s) 39, 584, 744, 789
TseFI GTSAC 5 cut(s) 37, 248, 253, 280, 784
TseI GCWGC 8 cut(s) 307, 312, 503, 513, 651, 654, 980, 1293
Tsp45I GTSAC 5 cut(s) 37, 248, 253, 280, 784
TspDTI ATGAA 6 cut(s) 720, 871, 933, 1325, 1353, 1421
TspGWI ACGGA 3 cut(s) 45, 500, 1016
TspRI CASTG 4 cut(s) 39, 584, 744, 789
Tth111I GACNNNGTC 1 cut(s) 221
Van91I CCANNNNNTGG 1 cut(s) 472
VneI GTGCAC 1 cut(s) 580
XapI RAATTY 1 cut(s) 1416
XceI RCATGY 2 cut(s) 358, 1012
XhoI CTCGAG 1 cut(s) 1317
XmiI GTMKAC 3 cut(s) 59, 225, 1212
XmnI GAANNNNTTC 1 cut(s) 458
XspI CTAG 7 cut(s) 597, 825, 857, 1064, 1175, 1347, 1380
ZraI GACGTC 2 cut(s) 253, 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.