Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001434

Physical Location & Seq

Genomic Coordinates Forward (+)

42983053 .. 42987565

Gene Structure 4513 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0351500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGGCAGTGTGAAAGCAGTGGCTGTCATCAGCGGCGGAGATAAGTGCCCCCTGCTCAGAGGCGCTCTTCAATTCGTGCAGGGCCCCCAAGGGCCAACCCGTGTTAGAGGAAAAATTAGTGGCCTCTCTCCGGGCCTTCATGGCTTCCATATTCACGCTCTTGGTGATACCTCCAACGGCTGCAATTCCACTGGACCTCACTTCAATCCACTGAACAAGGCCCATGGAGCTCCTTCAGACAAGGACCGTCACGCCGGTGATTTGGGTAACGTCACTGCAGGCCCAGATGGAGTTGCTGAGGTTTCTGTTGACGACTGGCAGATTCCACTAAGCGGACCTCATTCCATTCTTGGGAGGGCGGTTGTAGTGCATGCTGATCCTGATGATCTTGGCAAAGGTGGACATGAACTCAGCAAATCTACTGGGAATGCAGGAGCAAGAGTTGGATGCGAGGAGAAAAAGAAAATCCATTGGAGAAGTTGGGAGAGACTATGTTTAACCAAGCATGAGGGAGGTATGGGCTTTAAAAACATTTATGCTTACAACATTGCAATGCTGGCTAAACAGGGGTGGAGGATTCTCTCCAATCCTCACTCTCTAATTGCTCAGTTGTACAAGGCTAGGTACTTTCCACAATGTTCATTCTGGGAGGCTGAACTGGGTGATTCTCCTTCGTTCTCCTGGAGGAGTATACTCCAAGGTAGGGCAGTGCTTAAGGCGGGTGTCCAATGGAAAATTGGGGATGGTGAACAGGTTGATATTTGGTGTGATCGATGGATTCCTGTACATGCTTCGTATCAAGCCACTAGACCCCAAAACACTTCTTTTAACAAAGTTGCTGATCTTATTGATGCTCCAAACCGGCAATGGAAAACGGGGGAAGTGCATAGTCTCTTTCCAAATGATATAGCCTCTCGTATTCTCTGTATTCCTTTGAGCAGAAATCATAGTCCGGATAGGTTAATTTGGAGTCCGGAAAAGAGAGGACATTACTCTGTCAAGTCGGCATATTGGATTGCAAGGGTCGAAGTCATGCAAAATACTCTCACGTCTACCTCCAATGGTGATCCATACAAAGAACTTTGGCGATGTTTATGGAAGGCCAAAGTACCTGGAAAGATCGAAGATGTGGCACATCTTTTCTGTATGTGTCAAACAGCTTCAACTATTCTTTCAGGTCCACCATTTCATTTACAAGATACCCTACTGCCATCGATCAACTTTAAGGATTGGATGCTGGAACGGGCATTAACTCTAAGCTCAGATCTTTTTGCACGTTTAATGATGATAATATGGGCCCTTTGGAAGAACAGGAACAATGTGCTCTGGGCAGGAACCAGGCAGACAGCTCAAGATATCATATTAAGCAAGAGCTCGAGGTACTGTGAAGCAGCCTCACAAACAACCAAGAACAAGATGGAAGCCTGCTGTGGGGCCTTCAAACTGAATGTGGATGCAGCCTTCTTACCTCAACAAACCACAGGTGGAATAGGGGGAGTGTTAAGGGATGCCTCAGGAAATTTTGTTGCAGCTTTTGCAAGACCAGTTCAACATGCTGCATCTCCTAAGCAATGTGAACTTTTAGCCATTAGAGCAGGAGTAGATTTTCTGGTTTCCCTCCAAGTGCAGCAGGCTGTCATCGAGAGTGATAGTACGGTGGCTATTGCTGAAGCTCTCAGCCCAGATCACAGCATGTTAGCTAATGGAGGTTTAATAGATGATATACAATGTGCCATGCAATGCATCCCCAACATTCGCATTTGCTATCAACCCCGATCTAGTAATTTGGTAGCACATAGATTGGCGGGAATAGGTTTTGAGGCAAACCACAACTCTGTATGGTTGGGACTAGTCCCTGAATGTATTCGTGATGTTCTCAGTCACGATCTCCAGTACCTCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04137 ko04140 map04137 map04140

Pfam Domains

Protein Families

WD40

Protein Analysis

634

Amino Acids

69.55

Weight (kDa)

8.63

Isoelectric Point (pI)

38.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sod_Cu	PF00080	20 - 150	4.6e-45	Copper/zinc superoxide dismutase (SODC)
RVT_3	PF13456	483 - 602	1.2e-17	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04140 AT1G04140 AT5G43930 AT5G43930 AT5G43930 AT5G43930
fragaria_vesca	FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_2g20210 FvH4_4g05210 FvH4_4g05210 FvH4_4g05210
malus_domestica	MD05G1185600.v1.1 MD10G1173800.v1.1 MD13G1226100.v1.1 MD16G1231400.v1.1
prunus_persica	Prupe.1G053600_v2.0.a1 Prupe.1G053600_v2.0.a1 Prupe.1G053600_v2.0.a1 Prupe.1G053600_v2.0.a1 Prupe.8G212400_v2.0.a1
pyrus_communis	pycom13g19940 pycom16g19360
rosa_chinensis	RchiOBHm_Chr4g0396141 RchiOBHm_Chr6g0285981
rosa_laevigata	RLG00000009566 RLG00000012592
rosa_multiflora	Rmu_co8311601.1_g000001
rosa_roxburghii	Rroxscaffold_5G00340990 Rroxscaffold_7G00182550
rosa_rugosa	Rorug03G0351500 Rorug03G0351600 Rorug03G0351700 Rorug03G0351800 Rorug03G0351900 Rorug06G0177900 Rorug06G0178000
rosa_samantha	Rh4BG065000 Rh4CG071800 Rh4DG061700 Rh6AG290000 Rh6BG292000 Rh6CG293000 Rh6DG285100
rosa_wichuraiana	Rw4G005370 Rw6G024990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	691, 1052
AccIII	TCCGGA	2 cut(s)	952, 973
AciI	CCGC	6 cut(s)	33, 36, 333, 359, 719, 1805
AclWI	GGATC	2 cut(s)	371, 1061
AcsI	RAATTY	1 cut(s)	1519
AcuI	CTGAAG	2 cut(s)	219, 1689
AfaI	GTAC	7 cut(s)	614, 626, 786, 1110, 1382, 1654, 1895
AfiI	CCNNNNNNNGG	5 cut(s)	130, 332, 351, 703, 1431
AflII	CTTAAG	1 cut(s)	713
AgsI	TTSAA	5 cut(s)	71, 205, 1164, 1441, 1550
AhlI	ACTAGT	1 cut(s)	1849
AjiI	CACGTC	1 cut(s)	1050
AjnI	CCWGG	3 cut(s)	680, 1111, 1337
AleI	CACNNNNGTG	1 cut(s)	255
AluBI	AGCT	8 cut(s)	230, 1160, 1260, 1349, 1374, 1532, 1673, 1700
AluI	AGCT	8 cut(s)	230, 1160, 1260, 1349, 1374, 1532, 1673, 1700
Alw21I	GWGCWC	3 cut(s)	232, 1326, 1376
Alw26I	GTCTC	2 cut(s)	481, 896
AlwI	GGATC	2 cut(s)	371, 1061
AlwNI	CAGNNNCTG	1 cut(s)	23
Ama87I	CYCGRG	1 cut(s)	1375
Aor13HI	TCCGGA	2 cut(s)	952, 973
AoxI	GGCC	9 cut(s)	82, 92, 121, 133, 219, 280, 1101, 1296, 1434
ApaI	GGGCCC	2 cut(s)	86, 1300
ApeKI	GCWGC	6 cut(s)	180, 1391, 1457, 1529, 1556, 1627
ApoI	RAATTY	1 cut(s)	1519
Asp700I	GAANNNNTTC	1 cut(s)	1863
AspLEI	GCGC	1 cut(s)	65
AsuC2I	CCSGG	1 cut(s)	132
AsuHPI	GGTGA	5 cut(s)	176, 269, 674, 758, 1076
AvaI	CYCGRG	1 cut(s)	1375
AvaII	GGWCC	4 cut(s)	194, 244, 335, 1178
AxyI	CCTNAGG	1 cut(s)	1513
BaeGI	GKGCMC	3 cut(s)	50, 86, 1300
BanII	GRGCYC	4 cut(s)	86, 232, 1300, 1376
Bbv12I	GWGCWC	3 cut(s)	232, 1326, 1376
BbvCI	CCTCAGC	1 cut(s)	297
BbvI	GCAGC	6 cut(s)	167, 1403, 1469, 1541, 1543, 1639
BccI	CCATC	5 cut(s)	281, 737, 768, 1219, 1411
BceAI	ACGGC	1 cut(s)	193
BciT130I	CCWGG	3 cut(s)	682, 1113, 1339
BcnI	CCSGG	1 cut(s)	132
BcoDI	GTCTC	2 cut(s)	481, 896
BcuI	ACTAGT	1 cut(s)	1849
BfaI	CTAG	4 cut(s)	621, 807, 1779, 1850
BfmI	CTRYAG	1 cut(s)	276
BfoI	RGCGCY	1 cut(s)	66
BfrI	CTTAAG	1 cut(s)	713
BglI	GCCNNNNNGGC	1 cut(s)	141
BglII	AGATCT	1 cut(s)	1264
BisI	GCNGC	7 cut(s)	34, 181, 1392, 1458, 1530, 1557, 1628
BlsI	GCNGC	7 cut(s)	35, 182, 1393, 1459, 1531, 1558, 1629
Bme1390I	CCNGG	4 cut(s)	132, 682, 1113, 1339
Bme18I	GGWCC	4 cut(s)	194, 244, 335, 1178
BmeT110I	CYCGRG	1 cut(s)	1375
BmgBI	CACGTC	1 cut(s)	1050
BmiI	GGNNCC	5 cut(s)	84, 85, 1298, 1336, 1435
BmrFI	CCNGG	4 cut(s)	132, 682, 1113, 1339
BmrI	ACTGGG	2 cut(s)	432, 668
BmsI	GCATC	7 cut(s)	437, 841, 1224, 1444, 1498, 1568, 1752
BmuI	ACTGGG	2 cut(s)	432, 668
BpmI	CTGGAG	2 cut(s)	703, 1874
Bpu10I	CCTNAGC	2 cut(s)	297, 1566
BpuEI	CTTGAG	1 cut(s)	1335
BpuMI	CCSGG	1 cut(s)	132
Bsa29I	ATCGAT	2 cut(s)	772, 1214
BsaJI	CCNNGG	3 cut(s)	88, 223, 697
BsaWI	WCCGGW	2 cut(s)	952, 973
BsaXI	ACNNNNNCTCC	2 cut(s)	426, 456
Bsc4I	CCNNNNNNNGG	5 cut(s)	130, 332, 351, 703, 1431
Bse118I	RCCGGY	2 cut(s)	254, 861
Bse1I	ACTGG	6 cut(s)	196, 320, 427, 663, 1544, 1891
Bse21I	CCTNAGG	1 cut(s)	1513
Bse3DI	GCAATG	5 cut(s)	546, 558, 872, 1577, 1745
BseAI	TCCGGA	2 cut(s)	952, 973
BseBI	CCWGG	3 cut(s)	682, 1113, 1339
BseCI	ATCGAT	2 cut(s)	772, 1214
BseDI	CCNNGG	3 cut(s)	88, 223, 697
BseGI	GGATG	6 cut(s)	452, 748, 1239, 1459, 1513, 1743
BseLI	CCNNNNNNNGG	5 cut(s)	130, 332, 351, 703, 1431
BseMI	GCAATG	5 cut(s)	546, 558, 872, 1577, 1745
BseMII	CTCAG	8 cut(s)	70, 288, 424, 620, 1275, 1527, 1690, 1891
BseNI	ACTGG	6 cut(s)	196, 320, 427, 663, 1544, 1891
BseRI	GAGGAG	2 cut(s)	467, 700
BseSI	GKGCMC	3 cut(s)	50, 86, 1300
BseXI	GCAGC	6 cut(s)	167, 1403, 1469, 1541, 1543, 1639
BsgI	GTGCAG	2 cut(s)	98, 1646
BshFI	GGCC	9 cut(s)	84, 94, 123, 135, 221, 282, 1103, 1298, 1436
BshVI	ATCGAT	2 cut(s)	772, 1214
BsiHKAI	GWGCWC	3 cut(s)	232, 1326, 1376
BsiHKCI	CYCGRG	1 cut(s)	1375
BsiSI	CCGG	5 cut(s)	131, 255, 862, 953, 974
BslFI	GGGAC	2 cut(s)	1838, 1860
BslI	CCNNNNNNNGG	5 cut(s)	130, 332, 351, 703, 1431
BsmAI	GTCTC	2 cut(s)	481, 896
BsmFI	GGGAC	2 cut(s)	1838, 1860
BsmI	GAATGC	1 cut(s)	433
BsnI	GGCC	9 cut(s)	84, 94, 123, 135, 221, 282, 1103, 1298, 1436
BsoBI	CYCGRG	1 cut(s)	1375
Bsp120I	GGGCCC	2 cut(s)	82, 1296
Bsp1286I	GDGCHC	6 cut(s)	50, 86, 232, 1300, 1326, 1376
Bsp13I	TCCGGA	2 cut(s)	952, 973
Bsp1407I	TGTACA	2 cut(s)	612, 784
Bsp19I	CCATGG	1 cut(s)	223
BspACI	CCGC	6 cut(s)	33, 36, 333, 359, 719, 1805
BspANI	GGCC	9 cut(s)	84, 94, 123, 135, 221, 282, 1103, 1298, 1436
BspCNI	CTCAG	8 cut(s)	69, 289, 423, 619, 1274, 1526, 1689, 1890
BspDI	ATCGAT	2 cut(s)	772, 1214
BspEI	TCCGGA	2 cut(s)	952, 973
BspLI	GGNNCC	5 cut(s)	84, 85, 1298, 1336, 1435
BspMAI	CTGCAG	1 cut(s)	280
BspPI	GGATC	2 cut(s)	371, 1061
BspQI	GCTCTTC	1 cut(s)	72
BspTI	CTTAAG	1 cut(s)	713
BsrDI	GCAATG	5 cut(s)	546, 558, 872, 1577, 1745
BsrFI	RCCGGY	2 cut(s)	254, 861
BsrGI	TGTACA	2 cut(s)	612, 784
BsrI	ACTGG	6 cut(s)	196, 320, 427, 663, 1544, 1891
BssAI	RCCGGY	2 cut(s)	254, 861
BssECI	CCNNGG	3 cut(s)	88, 223, 697
BssNAI	GTATAC	1 cut(s)	692
BssT1I	CCWWGG	3 cut(s)	88, 223, 697
Bst1107I	GTATAC	1 cut(s)	692
Bst2UI	CCWGG	3 cut(s)	682, 1113, 1339
Bst4CI	ACNGT	3 cut(s)	248, 1385, 1657
Bst6I	CTCTTC	1 cut(s)	72
BstAFI	CTTAAG	1 cut(s)	713
BstAPI	GCANNNNNTGC	1 cut(s)	1535
BstAUI	TGTACA	2 cut(s)	612, 784
BstC8I	GCNNGC	5 cut(s)	280, 372, 558, 1426, 1632
BstDSI	CCRYGG	1 cut(s)	223
BstF5I	GGATG	6 cut(s)	452, 748, 1239, 1459, 1513, 1743
BstH2I	RGCGCY	1 cut(s)	66
BstHHI	GCGC	1 cut(s)	65
BstMAI	GTCTC	2 cut(s)	481, 896
BstMWI	GCNNNNNNNGC	5 cut(s)	141, 227, 557, 1535, 1592
BstNI	CCWGG	3 cut(s)	682, 1113, 1339
BstNSI	RCATGY	4 cut(s)	374, 791, 1556, 1696
BstSCI	CCNGG	4 cut(s)	130, 680, 1111, 1337
BstSFI	CTRYAG	1 cut(s)	276
BstSLI	GKGCMC	3 cut(s)	50, 86, 1300
BstV1I	GCAGC	6 cut(s)	167, 1403, 1469, 1541, 1543, 1639
BstX2I	RGATCY	1 cut(s)	1264
BstYI	RGATCY	1 cut(s)	1264
BstZ17I	GTATAC	1 cut(s)	692
Bsu15I	ATCGAT	2 cut(s)	772, 1214
Bsu36I	CCTNAGG	1 cut(s)	1513
BsuRI	GGCC	9 cut(s)	84, 94, 123, 135, 221, 282, 1103, 1298, 1436
BsuTUI	ATCGAT	2 cut(s)	772, 1214
BtgI	CCRYGG	1 cut(s)	223
BtgZI	GCGATG	1 cut(s)	1102
BtrI	CACGTC	1 cut(s)	1050
BtsCI	GGATG	6 cut(s)	452, 748, 1239, 1459, 1513, 1743
BtsI	GCAGTG	4 cut(s)	13, 24, 273, 714
BtsIMutI	CAGTG	6 cut(s)	13, 24, 189, 209, 273, 714
Cac8I	GCNNGC	5 cut(s)	280, 372, 558, 1426, 1632
CaiI	CAGNNNCTG	1 cut(s)	23
CfoI	GCGC	1 cut(s)	65
Cfr10I	RCCGGY	2 cut(s)	254, 861
ClaI	ATCGAT	2 cut(s)	772, 1214
Csp6I	GTAC	7 cut(s)	613, 625, 785, 1109, 1381, 1653, 1894
CviQI	GTAC	7 cut(s)	613, 625, 785, 1109, 1381, 1653, 1894
DraI	TTTAAA	1 cut(s)	526
Eam1104I	CTCTTC	1 cut(s)	72
EarI	CTCTTC	1 cut(s)	72
EciI	GGCGGA	1 cut(s)	51
Ecl136II	GAGCTC	2 cut(s)	230, 1374
Eco130I	CCWWGG	3 cut(s)	88, 223, 697
Eco24I	GRGCYC	4 cut(s)	86, 232, 1300, 1376
Eco32I	GATATC	1 cut(s)	1357
Eco47I	GGWCC	4 cut(s)	194, 244, 335, 1178
Eco53kI	GAGCTC	2 cut(s)	230, 1374
Eco57I	CTGAAG	2 cut(s)	219, 1689
Eco81I	CCTNAGG	1 cut(s)	1513
Eco88I	CYCGRG	1 cut(s)	1375
EcoICRI	GAGCTC	2 cut(s)	230, 1374
EcoO109I	RGGNCCY	4 cut(s)	82, 83, 1297, 1434
EcoRII	CCWGG	3 cut(s)	680, 1111, 1337
EcoRV	GATATC	1 cut(s)	1357
EcoT14I	CCWWGG	3 cut(s)	88, 223, 697
EcoT22I	ATGCAT	1 cut(s)	1745
EcoT38I	GRGCYC	4 cut(s)	86, 232, 1300, 1376
ErhI	CCWWGG	3 cut(s)	88, 223, 697
FaqI	GGGAC	2 cut(s)	1838, 1860
FauI	CCCGC	2 cut(s)	712, 1798
FblI	GTMKAC	2 cut(s)	691, 1052
Fnu4HI	GCNGC	7 cut(s)	34, 181, 1392, 1458, 1530, 1557, 1628
FokI	GGATG	6 cut(s)	459, 755, 1246, 1466, 1520, 1730
FriOI	GRGCYC	4 cut(s)	86, 232, 1300, 1376
Fsp4HI	GCNGC	7 cut(s)	34, 181, 1392, 1458, 1530, 1557, 1628
FspBI	CTAG	4 cut(s)	621, 807, 1779, 1850
GlaI	GCGC	1 cut(s)	64
GluI	GCNGC	7 cut(s)	34, 181, 1392, 1458, 1530, 1557, 1628
GsuI	CTGGAG	2 cut(s)	703, 1874
HaeII	RGCGCY	1 cut(s)	66
HaeIII	GGCC	9 cut(s)	84, 94, 123, 135, 221, 282, 1103, 1298, 1436
HapII	CCGG	5 cut(s)	131, 255, 862, 953, 974
HhaI	GCGC	1 cut(s)	65
Hin6I	GCGC	1 cut(s)	63
HinP1I	GCGC	1 cut(s)	63
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HinfI	GANTC	5 cut(s)	322, 577, 665, 778, 970
HpaII	CCGG	5 cut(s)	131, 255, 862, 953, 974
HphI	GGTGA	5 cut(s)	176, 269, 674, 758, 1076
Hpy166II	GTNNAC	7 cut(s)	310, 401, 692, 749, 1053, 1181, 1577
Hpy188I	TCNGA	3 cut(s)	59, 238, 1264
Hpy188III	TCNNGA	8 cut(s)	380, 953, 974, 1352, 1515, 1642, 1868, 1883
Hpy8I	GTNNAC	7 cut(s)	310, 401, 692, 749, 1053, 1181, 1577
HpyAV	CCTTC	6 cut(s)	146, 243, 681, 1093, 1447, 1471
HpyCH4III	ACNGT	3 cut(s)	248, 1385, 1657
HpyCH4IV	ACGT	3 cut(s)	270, 1049, 1276
HpyF10VI	GCNNNNNNNGC	5 cut(s)	141, 227, 557, 1535, 1592
HpySE526I	ACGT	3 cut(s)	270, 1049, 1276
HspAI	GCGC	1 cut(s)	63
Kpn2I	TCCGGA	2 cut(s)	952, 973
LguI	GCTCTTC	1 cut(s)	72
LmnI	GCTCC	4 cut(s)	227, 235, 434, 859
Lsp1109I	GCAGC	6 cut(s)	167, 1403, 1469, 1541, 1543, 1639
LweI	GCATC	7 cut(s)	437, 841, 1224, 1444, 1498, 1568, 1752
MaeI	CTAG	4 cut(s)	621, 807, 1779, 1850
MaeII	ACGT	3 cut(s)	270, 1049, 1276
MaeIII	GTNAC	4 cut(s)	248, 266, 271, 1880
MboII	GAAGA	3 cut(s)	59, 1136, 1318
MflI	RGATCY	1 cut(s)	1264
MhlI	GDGCHC	6 cut(s)	50, 86, 232, 1300, 1326, 1376
MluCI	AATT	8 cut(s)	71, 114, 184, 600, 735, 963, 1519, 1783
MlyI	GAGTC	1 cut(s)	979
MmeI	TCCRAC	2 cut(s)	198, 424
Mph1103I	ATGCAT	1 cut(s)	1745
MroI	TCCGGA	2 cut(s)	952, 973
MroXI	GAANNNNTTC	1 cut(s)	1863
MslI	CAYNNNNRTG	2 cut(s)	255, 551
MspA1I	CMGCKG	1 cut(s)	33
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	5 cut(s)	131, 255, 862, 953, 974
MspR9I	CCNGG	4 cut(s)	132, 682, 1113, 1339
Mva1269I	GAATGC	1 cut(s)	433
MvaI	CCWGG	3 cut(s)	682, 1113, 1339
MwoI	GCNNNNNNNGC	5 cut(s)	141, 227, 557, 1535, 1592
NciI	CCSGG	1 cut(s)	132
NcoI	CCATGG	1 cut(s)	223
NlaIV	GGNNCC	5 cut(s)	84, 85, 1298, 1336, 1435
NmuCI	GTSAC	3 cut(s)	248, 271, 1880
NsiI	ATGCAT	1 cut(s)	1745
NspI	RCATGY	4 cut(s)	374, 791, 1556, 1696
OliI	CACNNNNGTG	1 cut(s)	255
PaeI	GCATGC	1 cut(s)	374
PaeR7I	CTCGAG	1 cut(s)	1375
PciSI	GCTCTTC	1 cut(s)	72
PctI	GAATGC	1 cut(s)	433
PdmI	GAANNNNTTC	1 cut(s)	1863
PfeI	GAWTC	4 cut(s)	322, 577, 665, 778
PfoI	TCCNGGA	1 cut(s)	680
PkrI	GCNGC	7 cut(s)	35, 182, 1393, 1459, 1531, 1558, 1629
PleI	GAGTC	1 cut(s)	978
PpsI	GAGTC	1 cut(s)	978
Psp124BI	GAGCTC	2 cut(s)	232, 1376
Psp6I	CCWGG	3 cut(s)	680, 1111, 1337
PspGI	CCWGG	3 cut(s)	680, 1111, 1337
PspN4I	GGNNCC	5 cut(s)	84, 85, 1298, 1336, 1435
PspOMI	GGGCCC	2 cut(s)	82, 1296
PspXI	VCTCGAGB	1 cut(s)	1375
PstI	CTGCAG	1 cut(s)	280
PstNI	CAGNNNCTG	1 cut(s)	23
PsuI	RGATCY	1 cut(s)	1264
RsaI	GTAC	7 cut(s)	614, 626, 786, 1110, 1382, 1654, 1895
RsaNI	GTAC	7 cut(s)	613, 625, 785, 1109, 1381, 1653, 1894
RseI	CAYNNNNRTG	2 cut(s)	255, 551
SacI	GAGCTC	2 cut(s)	232, 1376
SapI	GCTCTTC	1 cut(s)	72
SatI	GCNGC	7 cut(s)	34, 181, 1392, 1458, 1530, 1557, 1628
SchI	GAGTC	1 cut(s)	979
ScrFI	CCNGG	4 cut(s)	132, 682, 1113, 1339
SduI	GDGCHC	6 cut(s)	50, 86, 232, 1300, 1326, 1376
SfaNI	GCATC	7 cut(s)	437, 841, 1224, 1444, 1498, 1568, 1752
SfcI	CTRYAG	1 cut(s)	276
Sfr274I	CTCGAG	1 cut(s)	1375
SgrAI	CRCCGGYG	1 cut(s)	254
SinI	GGWCC	4 cut(s)	194, 244, 335, 1178
SlaI	CTCGAG	1 cut(s)	1375
SmiMI	CAYNNNNRTG	2 cut(s)	255, 551
SmlI	CTYRAG	3 cut(s)	713, 1350, 1375
SmoI	CTYRAG	3 cut(s)	713, 1350, 1375
SpeI	ACTAGT	1 cut(s)	1849
SphI	GCATGC	1 cut(s)	374
Sse9I	AATT	8 cut(s)	71, 114, 184, 600, 735, 963, 1519, 1783
SsiI	CCGC	6 cut(s)	33, 36, 333, 359, 719, 1805
SspMI	CTAG	4 cut(s)	621, 807, 1779, 1850
SstI	GAGCTC	2 cut(s)	232, 1376
StyD4I	CCNGG	4 cut(s)	130, 680, 1111, 1337
StyI	CCWWGG	3 cut(s)	88, 223, 697
TaaI	ACNGT	3 cut(s)	248, 1385, 1657
TaiI	ACGT	3 cut(s)	273, 1052, 1279
TaqI	TCGA	6 cut(s)	772, 1026, 1122, 1214, 1376, 1641
TasI	AATT	8 cut(s)	71, 114, 184, 600, 735, 963, 1519, 1783
TatI	WGTACW	2 cut(s)	612, 784
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	4 cut(s)	322, 577, 665, 778
TscAI	CASTG	6 cut(s)	13, 24, 196, 216, 280, 714
TseFI	GTSAC	3 cut(s)	248, 271, 1880
TseI	GCWGC	6 cut(s)	180, 1391, 1457, 1529, 1556, 1627
Tsp45I	GTSAC	3 cut(s)	248, 271, 1880
TspDTI	ATGAA	4 cut(s)	128, 420, 630, 1178
TspRI	CASTG	6 cut(s)	13, 24, 196, 216, 280, 714
Vha464I	CTTAAG	1 cut(s)	713
VpaK11BI	GGWCC	4 cut(s)	194, 244, 335, 1178
XapI	RAATTY	1 cut(s)	1519
XceI	RCATGY	4 cut(s)	374, 791, 1556, 1696
XcmI	CCANNNNNNNNNTGG	3 cut(s)	734, 864, 1414
XhoI	CTCGAG	1 cut(s)	1375
XmiI	GTMKAC	2 cut(s)	691, 1052
XmnI	GAANNNNTTC	1 cut(s)	1863
XspI	CTAG	4 cut(s)	621, 807, 1779, 1850
Zsp2I	ATGCAT	1 cut(s)	1745

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.