WD40 repeats
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UQ_con | PF00179 | 29 - 93 | 2e-17 | Ubiquitin-conjugating enzyme |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 37 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 206 |
| AclWI | GGATC | 4 cut(s) | 110, 123, 180, 193 |
| AcuI | CTGAAG | 1 cut(s) | 115 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 206 |
| AflII | CTTAAG | 1 cut(s) | 98 |
| AflIII | ACRYGT | 1 cut(s) | 156 |
| AgsI | TTSAA | 2 cut(s) | 91, 256 |
| AluBI | AGCT | 2 cut(s) | 97, 289 |
| AluI | AGCT | 2 cut(s) | 97, 289 |
| AlwI | GGATC | 4 cut(s) | 110, 123, 180, 193 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 143 |
| AoxI | GGCC | 1 cut(s) | 72 |
| AsuHPI | GGTGA | 1 cut(s) | 217 |
| BamHI | GGATCC | 2 cut(s) | 115, 185 |
| BccI | CCATC | 1 cut(s) | 52 |
| BfrI | CTTAAG | 1 cut(s) | 98 |
| BfuAI | ACCTGC | 1 cut(s) | 37 |
| BmiI | GGNNCC | 2 cut(s) | 117, 187 |
| BmsI | GCATC | 1 cut(s) | 93 |
| BpmI | CTGGAG | 1 cut(s) | 228 |
| Bpu10I | CCTNAGC | 1 cut(s) | 150 |
| Bsa29I | ATCGAT | 1 cut(s) | 47 |
| BsaWI | WCCGGW | 1 cut(s) | 13 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 206 |
| BseCI | ATCGAT | 1 cut(s) | 47 |
| BseGI | GGATG | 1 cut(s) | 35 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BshFI | GGCC | 1 cut(s) | 74 |
| BshVI | ATCGAT | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 14 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 206 |
| BsnI | GGCC | 1 cut(s) | 74 |
| Bsp143I | GATC | 2 cut(s) | 115, 185 |
| BspANI | GGCC | 1 cut(s) | 74 |
| BspDI | ATCGAT | 1 cut(s) | 47 |
| BspLI | GGNNCC | 2 cut(s) | 117, 187 |
| BspMI | ACCTGC | 1 cut(s) | 37 |
| BspPI | GGATC | 4 cut(s) | 110, 123, 180, 193 |
| BspTI | CTTAAG | 1 cut(s) | 98 |
| BssMI | GATC | 2 cut(s) | 115, 185 |
| BstAFI | CTTAAG | 1 cut(s) | 98 |
| BstC8I | GCNNGC | 3 cut(s) | 23, 171, 287 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstF5I | GGATG | 1 cut(s) | 35 |
| BstKTI | GATC | 2 cut(s) | 118, 188 |
| BstMBI | GATC | 2 cut(s) | 115, 185 |
| BstNSI | RCATGY | 1 cut(s) | 160 |
| BstX2I | RGATCY | 2 cut(s) | 115, 185 |
| BstYI | RGATCY | 2 cut(s) | 115, 185 |
| Bsu15I | ATCGAT | 1 cut(s) | 47 |
| BsuRI | GGCC | 1 cut(s) | 74 |
| BsuTUI | ATCGAT | 1 cut(s) | 47 |
| BtsCI | GGATG | 1 cut(s) | 35 |
| BveI | ACCTGC | 1 cut(s) | 37 |
| Cac8I | GCNNGC | 3 cut(s) | 23, 171, 287 |
| CaiI | CAGNNNCTG | 1 cut(s) | 143 |
| ClaI | ATCGAT | 1 cut(s) | 47 |
| CseI | GACGC | 1 cut(s) | 21 |
| CviAII | CATG | 1 cut(s) | 157 |
| CviJI | RGCY | 6 cut(s) | 10, 74, 97, 149, 198, 289 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 74, 97, 149, 198, 289 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| DpnI | GATC | 2 cut(s) | 117, 187 |
| DpnII | GATC | 2 cut(s) | 115, 185 |
| Eco32I | GATATC | 1 cut(s) | 51 |
| Eco57I | CTGAAG | 1 cut(s) | 115 |
| EcoRV | GATATC | 1 cut(s) | 51 |
| FaeI | CATG | 1 cut(s) | 160 |
| FaiI | YATR | 5 cut(s) | 19, 158, 182, 202, 204 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 71, 103 |
| FatI | CATG | 1 cut(s) | 156 |
| FauNDI | CATATG | 1 cut(s) | 202 |
| FokI | GGATG | 1 cut(s) | 22 |
| GsuI | CTGGAG | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 74 |
| HapII | CCGG | 1 cut(s) | 14 |
| HgaI | GACGC | 1 cut(s) | 21 |
| Hin1II | CATG | 1 cut(s) | 160 |
| HindIII | AAGCTT | 1 cut(s) | 287 |
| HpaII | CCGG | 1 cut(s) | 14 |
| HphI | GGTGA | 1 cut(s) | 217 |
| Hpy188III | TCNNGA | 1 cut(s) | 88 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 3 cut(s) | 85, 106, 139 |
| HpyCH4V | TGCA | 2 cut(s) | 109, 285 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| Hsp92II | CATG | 1 cut(s) | 160 |
| Kzo9I | GATC | 2 cut(s) | 115, 185 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 4 cut(s) | 27, 42, 123, 192 |
| LweI | GCATC | 1 cut(s) | 93 |
| MaeIII | GTNAC | 2 cut(s) | 223, 268 |
| MalI | GATC | 2 cut(s) | 117, 187 |
| MboI | GATC | 2 cut(s) | 115, 185 |
| MflI | RGATCY | 2 cut(s) | 115, 185 |
| MmeI | TCCRAC | 1 cut(s) | 63 |
| MnlI | CCTC | 5 cut(s) | 21, 85, 129, 203, 249 |
| MseI | TTAA | 1 cut(s) | 99 |
| MspCI | CTTAAG | 1 cut(s) | 98 |
| MspI | CCGG | 1 cut(s) | 14 |
| NdeI | CATATG | 1 cut(s) | 202 |
| NdeII | GATC | 2 cut(s) | 115, 185 |
| NlaIII | CATG | 1 cut(s) | 160 |
| NlaIV | GGNNCC | 2 cut(s) | 117, 187 |
| NmuCI | GTSAC | 1 cut(s) | 223 |
| NspI | RCATGY | 1 cut(s) | 160 |
| PciI | ACATGT | 1 cut(s) | 156 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 29 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 206 |
| PscI | ACATGT | 1 cut(s) | 156 |
| PspN4I | GGNNCC | 2 cut(s) | 117, 187 |
| PstNI | CAGNNNCTG | 1 cut(s) | 143 |
| PsuI | RGATCY | 2 cut(s) | 115, 185 |
| SaqAI | TTAA | 1 cut(s) | 99 |
| Sau3AI | GATC | 2 cut(s) | 115, 185 |
| SetI | ASST | 6 cut(s) | 31, 99, 142, 214, 265, 291 |
| SfaNI | GCATC | 1 cut(s) | 93 |
| SmlI | CTYRAG | 1 cut(s) | 98 |
| SmoI | CTYRAG | 1 cut(s) | 98 |
| TaqI | TCGA | 1 cut(s) | 47 |
| Tru1I | TTAA | 1 cut(s) | 99 |
| Tru9I | TTAA | 1 cut(s) | 99 |
| TseFI | GTSAC | 1 cut(s) | 223 |
| Tsp45I | GTSAC | 1 cut(s) | 223 |
| TspDTI | ATGAA | 2 cut(s) | 152, 221 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 206 |
| Vha464I | CTTAAG | 1 cut(s) | 98 |
| XceI | RCATGY | 1 cut(s) | 160 |