MD05G1185600.v1.1

WD domain, G-beta repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0001434
Physical Location & Seq
Forward (+)
31438166 .. 31445161
6996 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1185600.v1.1.491

Sequence Viewer

Length: 2439 bp
ATGAAGTCCGATCTTACGATGGCTGGACCTTCGCGAACGTTGGATCAGACCCCGATTTCTCCATGGCTGTCCGCCGAGCATCATCACTGCAGTGGCAGAAATGTGGTTGCCTTGATAGCACGGAGGGAGATTTCTCCTAGAGCAAAACATGTGCCCACAAGGCGGTGGGGAGAAACTTCTAATAGGAAATCTAGTTCCACCTATGGGCCTAAGGGTGAAGCAATCAGAGATGCGAAACGTGGCCTCCGCTCATGGGTTGAAGCAGAGTCACTGCGGCATTTGTCAGCCAAGTATTGTGATTTAGTGCCTCCTCCAAGGTCAACCATTGCAGCAGCATTCAGCCCCGATGGAAGAAAACTTGCTTCTACGCATGGTGACCACACTGTAAAGATAATTGATTGCCAAACTGGCAGATGCGTAAAGGTTTTGAGCGGCCATAGAAGGACACCTTGGGTGGTTAGGTTTCATCCTTTGAATCCAGAAATAATTGCTAGTGGAAGTTTGGATCATGAAGTTCGCTTATGGGATTTAAACACATCAGATTGTATTGGCTCTCGTGATTTCTATCGACCTATTGCATCTATTGCTTTTCATGCCAATGGGGAACTCCTAGCTGTTGCATCAGGACACAAGTTGTATATATGGAAATACAATGGGGAACCTTCTTCTCCAGACATGGTATTAAAAACATGGCGTTCCCTTCGAGCAGTGCATTTTCACCCCCAAGCTGCTCCGTTTCTCTTAACTGCTGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGTCTCAAGCAACATCTCCCGGCTACTTGCAATATCCATCTCCTGCTGTTTTTGTGGCAAACGTTGATTTTAGTGAACGTCTTAGTTTGGCTACTCAACTACCACTTATGTCCTTGCCTTTTGTCTTCGTGCCGCCATATGTAGATGATCCAAGAATAGTAATGCAGCCTGAAAACGGACCTGCTGGATCAAATAGCATGCAAGTCACTTCTGCTTCAATGCAGTTTCAAGCAGATGTAAATGCAGCAGAGCAGGATGCTACCACAGTTTCTCGAATGGAGACATTTCCATCAGCTCCAATTGTTTCCAATCACAATGCTGAAGGCAATGCAGATAATTATTTCCTTAATGGAACGAGAAGTGATGCTTGTGACCGCACAGGAGATGCAATGGAGACTGATGAGATGCCAGCTGTAGGAGGAAGCCAGCATGGAAGCTGGATGAATTTAGATCCTGTGAATAATAGAGTACCTGAAAATACTTCAAGTCATCCTGGTTTTACTGAATTTGGGCAACCTTATAGAACGTTTCCTTATAGAGATCCTGCATTCTGGGAATTGCCTTTTCTCCAAGGGTGGTTAACAGGTCAAAGCCAAGCTAATTTTCCCTTAATGCTTCCTCTTAATCATGGTGGGCTTAACAATTTAGCTCAGCCTATGGGTTCTTCTAGTTTGGTGTCACATCTGTCTGCTCATAACGTGACGGATGTGGCAGCTTCTTTAGCATTGCCAGGAAGCACCAGTGTATCTGGGCTTTCTGGAAGATCTGGCTTGCAGCATTATTATCCGCACTTCCACTTCTCTGGACCAGAATCAGGGGATAGTGCTTCCTTAAGTACCCAACCCGATGAGAATGATGCACAGCCCATTATTAGTCGAATCCAGTCTGATATTGATACATTAATGGCTGCAGCAGCAGCTGCAGAATTACCATGCACTGTAAAACTAAGAGTATGGTCACATGATATAAAAAATCCTTCTGCTCCGCTGAATGCTGAAAGATGTCGTTTAATTGTTCCTCATGCTGTTCTTTGCAGTGAAATGGGGGCTCATTTCTCCCCCTGTGGGAGATTTTTAGCTGCCTGTGTTGCATGCATGCTTCCTCATACGGAAGCTGACCCTGGACTACAAAGTCTAGTTCATCAGGATTCTGGAATTGCAACATCCCCAACTCGGCACCCAATCTCAGCTCACCAAGTTATGTATGAGCTTCGCATATATTCACTTGAGGAGGCCACATTTGGTTCGATACTTGTCTCTCGGGCAATTAGAGCAGCACATTGTTTGACTTCAATCCAATTCTCCCCCACGTCTGAGCACATATTACTGGCCTATGGTCGCCGCCATGGTTCTCTTCTTAAAAGTATTGTCGTTGATGGGGATACAACTGTACCTATTTACACTGTTCTTGAGGTTTACAGAGTTTCAGATATGGAACTTGTGAGAGTACTTCCCAGTGCAGAGGATGAGGTTAATGTTGCTTGCTTTCATCCCTTTGCTGGTGGAGGTCTGGTTTATGGGACCAAGGAAGGGAAGCTTAGGGTACTCCAGTTTGATGGTGCTCGAGATGAAAAGTTCATTGGACCAAATTACTTTACAGAGGAAAATACGGCTGTTGCAATGTTGAGGGAAATGGTTCAGAGAATTGCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0000422 GO:0000423 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005856 GO:0005929 GO:0005930 GO:0006914 GO:0006950 GO:0006996 GO:0007005 GO:0007033 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0008285 GO:0009056 GO:0009790 GO:0009792 GO:0009888 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010506 GO:0010508 GO:0010562 GO:0010656 GO:0010660 GO:0010662 GO:0010664 GO:0010665 GO:0010667 GO:0010941 GO:0016043 GO:0016236 GO:0019216 GO:0019220 GO:0019222 GO:0019899 GO:0021915 GO:0022411 GO:0022607 GO:0030139 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031625 GO:0031982 GO:0032501 GO:0032502 GO:0032838 GO:0033554 GO:0033674 GO:0035295 GO:0042127 GO:0042325 GO:0042327 GO:0042981 GO:0042995 GO:0043009 GO:0043066 GO:0043067 GO:0043069 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043523 GO:0043524 GO:0043549 GO:0043550 GO:0043551 GO:0043552 GO:0044085 GO:0044093 GO:0044237 GO:0044248 GO:0044389 GO:0044422 GO:0044424 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0045335 GO:0045834 GO:0045937 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051020 GO:0051174 GO:0051338 GO:0051347 GO:0051716 GO:0060429 GO:0060548 GO:0061726 GO:0061912 GO:0061919 GO:0065007 GO:0065009 GO:0070925 GO:0071840 GO:0080090 GO:0090218 GO:0097014 GO:0097708 GO:0098780 GO:0099568 GO:0120025 GO:0120038 GO:1901214 GO:1901215 GO:1903008 GO:1903725 GO:1903727 GO:1905037
KEGG Pathways
Metabolic & Signaling
ko04137 ko04140 map04137 map04140
Pfam Domains
Protein Families
WD40

Protein Analysis

813

Amino Acids

88.71

Weight (kDa)

6.14

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Prp19 PF24814 109 - 243 2.8e-11 Prp19 WD40 domain
WD40_Gbeta PF25391 109 - 205 5.4e-06 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 110 - 252 5.2e-20 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 110 - 216 3.1e-13 WDR3 first beta-propeller domain
WDR55 PF24796 110 - 210 2.6e-09 WDR55
Beta-prop_WDR5 PF25175 112 - 253 2.2e-19 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 112 - 212 5.1e-11 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 112 - 218 1.8e-11 CDC20/Fizzy WD40 domain
Beta-prop_WDR75_1st PF23869 113 - 185 8.2e-06 WD repeat-containing protein 75 first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 116 - 216 5e-09 WDR36/Utp21 second beta-propeller domain
Beta-prop_EML_2 PF23414 151 - 209 2.9e-06 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1914
Acc36I ACCTGC 1 cut(s) 973
AccB1I GGYRCC 1 cut(s) 1959
AccBSI CCGCTC 2 cut(s) 249, 432
AccII CGCG 1 cut(s) 34
AclI AACGTT 3 cut(s) 38, 846, 1310
AclWI GGATC 6 cut(s) 51, 513, 926, 979, 1229, 1319
AcoI YGGCCR 1 cut(s) 433
AcsI RAATTY 2 cut(s) 1228, 1289
AcuI CTGAAG 2 cut(s) 756, 1125
AfaI GTAC 5 cut(s) 1254, 1621, 2175, 2232, 2328
AflII CTTAAG 1 cut(s) 1615
AflIII ACRYGT 1 cut(s) 148
AgsI TTSAA 6 cut(s) 260, 475, 1002, 1013, 1269, 2076
AjiI CACGTC 1 cut(s) 2094
AjnI CCWGG 3 cut(s) 1276, 1513, 1903
AjuI GAANNNNNNNTTGG 6 cut(s) 433, 465, 1371, 1403, 2346, 2378
AleI CACNNNNGTG 1 cut(s) 90
AloI GAACNNNNNNTCC 2 cut(s) 178, 210
Alw21I GWGCWC 2 cut(s) 2103, 2347
Alw26I GTCTC 4 cut(s) 792, 1058, 1172, 2044
AlwI GGATC 6 cut(s) 51, 513, 926, 979, 1229, 1319
AlwNI CAGNNNCTG 1 cut(s) 1703
Ama87I CYCGRG 2 cut(s) 2043, 2346
AoxI GGCC 5 cut(s) 206, 241, 433, 2016, 2112
ApoI RAATTY 2 cut(s) 1228, 1289
AseI ATTAAT 1 cut(s) 1685
Asp700I GAANNNNTTC 1 cut(s) 2418
AspS9I GGNCC 6 cut(s) 26, 206, 962, 1589, 2304, 2366
AsuC2I CCSGG 1 cut(s) 804
AsuHPI GGTGA 4 cut(s) 227, 386, 710, 1967
AvaI CYCGRG 2 cut(s) 2043, 2346
AvaII GGWCC 5 cut(s) 26, 962, 1589, 2304, 2366
AxyI CCTNAGG 1 cut(s) 210
BaeGI GKGCMC 1 cut(s) 156
BaeI ACNNNNGTAYC 8 cut(s) 1512, 1545, 2157, 2157, 2190, 2190, 2318, 2351
BanI GGYRCC 1 cut(s) 1959
BanII GRGCYC 1 cut(s) 1834
BauI CACGAG 1 cut(s) 555
BbsI GAAGAC 1 cut(s) 901
Bbv12I GWGCWC 2 cut(s) 2103, 2347
BbvCI CCTCAGC 1 cut(s) 750
BccI CCATC 6 cut(s) 13, 341, 829, 1081, 2153, 2333
BceAI ACGGC 1 cut(s) 2409
BciT130I CCWGG 3 cut(s) 1278, 1515, 1905
BciVI GTATCC 1 cut(s) 2158
BcnI CCSGG 1 cut(s) 804
BcoDI GTCTC 4 cut(s) 792, 1058, 1172, 2044
BfaI CTAG 6 cut(s) 138, 192, 492, 611, 1452, 1919
BfmI CTRYAG 4 cut(s) 88, 1197, 1692, 1704
BfrI CTTAAG 1 cut(s) 1615
BfuAI ACCTGC 1 cut(s) 973
BfuI GTATCC 1 cut(s) 2158
BglI GCCNNNNNGGC 2 cut(s) 160, 408
BglII AGATCT 1 cut(s) 1547
BlpI GCTNAGC 1 cut(s) 1434
BmcAI AGTACT 1 cut(s) 2232
Bme1390I CCNGG 4 cut(s) 804, 1278, 1515, 1905
Bme18I GGWCC 5 cut(s) 26, 962, 1589, 2304, 2366
BmeT110I CYCGRG 2 cut(s) 2043, 2346
BmgBI CACGTC 1 cut(s) 2094
BmgT120I GGNCC 6 cut(s) 26, 206, 962, 1589, 2304, 2366
BmiI GGNNCC 3 cut(s) 660, 1961, 2305
BmrFI CCNGG 4 cut(s) 804, 1278, 1515, 1905
BmrI ACTGGG 1 cut(s) 2232
BmuI ACTGGG 1 cut(s) 2232
BpiI GAAGAC 1 cut(s) 901
BpmI CTGGAG 2 cut(s) 654, 2315
Bpu10I CCTNAGC 2 cut(s) 750, 2321
Bpu1102I GCTNAGC 1 cut(s) 1434
BpuEI CTTGAG 3 cut(s) 774, 2030, 2213
BpuMI CCSGG 1 cut(s) 804
BsaBI GATNNNNATC 1 cut(s) 564
BsaJI CCNNGG 7 cut(s) 62, 314, 449, 1354, 1903, 2128, 2307
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 2280, 2310
Bse1I ACTGG 6 cut(s) 412, 1524, 1666, 2115, 2238, 2332
Bse21I CCTNAGG 1 cut(s) 210
Bse3DI GCAATG 5 cut(s) 324, 1117, 1179, 1508, 2409
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 3 cut(s) 1278, 1515, 1905
BseDI CCNNGG 7 cut(s) 62, 314, 449, 1354, 1903, 2128, 2307
BseGI GGATG 8 cut(s) 466, 1045, 1230, 1273, 1495, 1946, 2254, 2272
BseJI GATNNNNATC 1 cut(s) 564
BseMI GCAATG 5 cut(s) 324, 1117, 1179, 1508, 2409
BseMII CTCAG 4 cut(s) 741, 1448, 1983, 2088
BseNI ACTGG 6 cut(s) 412, 1524, 1666, 2115, 2238, 2332
BseRI GAGGAG 2 cut(s) 300, 2027
BseSI GKGCMC 1 cut(s) 156
BsgI GTGCAG 1 cut(s) 2262
Bsh1236I CGCG 1 cut(s) 34
BshFI GGCC 5 cut(s) 208, 243, 435, 2018, 2114
BshNI GGYRCC 1 cut(s) 1959
BsiHKAI GWGCWC 2 cut(s) 2103, 2347
BsiHKCI CYCGRG 2 cut(s) 2043, 2346
BsiSI CCGG 1 cut(s) 804
BslFI GGGAC 1 cut(s) 2317
BsmAI GTCTC 4 cut(s) 792, 1058, 1172, 2044
BsmFI GGGAC 1 cut(s) 2317
BsmI GAATGC 3 cut(s) 335, 1331, 1780
BsnI GGCC 5 cut(s) 208, 243, 435, 2018, 2114
BsoBI CYCGRG 2 cut(s) 2043, 2346
Bsp1286I GDGCHC 4 cut(s) 156, 1834, 2103, 2347
Bsp143I GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
Bsp1720I GCTNAGC 1 cut(s) 1434
Bsp19I CCATGG 2 cut(s) 62, 2128
Bsp68I TCGCGA 1 cut(s) 34
BspANI GGCC 5 cut(s) 208, 243, 435, 2018, 2114
BspCNI CTCAG 4 cut(s) 742, 1447, 1982, 2089
BspFNI CGCG 1 cut(s) 34
BspHI TCATGA 1 cut(s) 508
BspLI GGNNCC 3 cut(s) 660, 1961, 2305
BspMAI CTGCAG 3 cut(s) 92, 1696, 1708
BspMI ACCTGC 1 cut(s) 973
BspPI GGATC 6 cut(s) 51, 513, 926, 979, 1229, 1319
BspT107I GGYRCC 1 cut(s) 1959
BspTI CTTAAG 1 cut(s) 1615
BsrBI CCGCTC 2 cut(s) 249, 432
BsrDI GCAATG 5 cut(s) 324, 1117, 1179, 1508, 2409
BsrI ACTGG 6 cut(s) 412, 1524, 1666, 2115, 2238, 2332
BssECI CCNNGG 7 cut(s) 62, 314, 449, 1354, 1903, 2128, 2307
BssMI GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
BssSI CACGAG 1 cut(s) 555
BssT1I CCWWGG 6 cut(s) 62, 314, 449, 1354, 2128, 2307
Bst2BI CACGAG 1 cut(s) 555
Bst2UI CCWGG 3 cut(s) 1278, 1515, 1905
Bst4CI ACNGT 5 cut(s) 385, 1051, 1723, 2173, 2188
Bst6I CTCTTC 2 cut(s) 775, 2142
BstAFI CTTAAG 1 cut(s) 1615
BstAPI GCANNNNNTGC 2 cut(s) 584, 1703
BstC8I GCNNGC 8 cut(s) 983, 1194, 1211, 1556, 1876, 1880, 2266, 2434
BstDEI CTNAG 8 cut(s) 210, 750, 866, 1434, 1730, 1969, 2097, 2321
BstDSI CCRYGG 2 cut(s) 62, 2128
BstEII GGTNACC 1 cut(s) 374
BstF5I GGATG 8 cut(s) 466, 1045, 1230, 1273, 1495, 1946, 2254, 2272
BstFNI CGCG 1 cut(s) 34
BstKTI GATC 9 cut(s) 13, 46, 508, 763, 934, 974, 1237, 1327, 1550
BstMAI GTCTC 4 cut(s) 792, 1058, 1172, 2044
BstMBI GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
BstNI CCWGG 3 cut(s) 1278, 1515, 1905
BstNSI RCATGY 4 cut(s) 152, 985, 1878, 1882
BstPI GGTNACC 1 cut(s) 374
BstSCI CCNGG 4 cut(s) 802, 1276, 1513, 1903
BstSFI CTRYAG 4 cut(s) 88, 1197, 1692, 1704
BstSLI GKGCMC 1 cut(s) 156
BstUI CGCG 1 cut(s) 34
BstV2I GAAGAC 1 cut(s) 901
BstX2I RGATCY 3 cut(s) 1234, 1324, 1547
BstXI CCANNNNNNTGG 2 cut(s) 1586, 2339
BstYI RGATCY 3 cut(s) 1234, 1324, 1547
Bsu36I CCTNAGG 1 cut(s) 210
BsuI GTATCC 1 cut(s) 2158
BsuRI GGCC 5 cut(s) 208, 243, 435, 2018, 2114
BtgI CCRYGG 2 cut(s) 62, 2128
BtrI CACGTC 1 cut(s) 2094
BtsCI GGATG 8 cut(s) 466, 1045, 1230, 1273, 1495, 1946, 2254, 2272
BtsI GCAGTG 5 cut(s) 85, 97, 269, 714, 1825
BtuMI TCGCGA 1 cut(s) 34
BveI ACCTGC 1 cut(s) 973
Cac8I GCNNGC 8 cut(s) 983, 1194, 1211, 1556, 1876, 1880, 2266, 2434
CaiI CAGNNNCTG 1 cut(s) 1703
CciI TCATGA 1 cut(s) 508
Cfr13I GGNCC 6 cut(s) 26, 206, 962, 1589, 2304, 2366
Csp6I GTAC 5 cut(s) 1253, 1620, 2174, 2231, 2327
CviQI GTAC 5 cut(s) 1253, 1620, 2174, 2231, 2327
DdeI CTNAG 8 cut(s) 210, 750, 866, 1434, 1730, 1969, 2097, 2321
DpnI GATC 9 cut(s) 12, 45, 507, 762, 933, 973, 1236, 1326, 1549
DpnII GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
DraI TTTAAA 1 cut(s) 531
DrdI GACNNNNNNGTC 1 cut(s) 1914
DseDI GACNNNNNNGTC 1 cut(s) 1914
EaeI YGGCCR 1 cut(s) 433
Eam1104I CTCTTC 2 cut(s) 775, 2142
EarI CTCTTC 2 cut(s) 775, 2142
EciI GGCGGA 1 cut(s) 61
Eco130I CCWWGG 6 cut(s) 62, 314, 449, 1354, 2128, 2307
Eco24I GRGCYC 1 cut(s) 1834
Eco47I GGWCC 5 cut(s) 26, 962, 1589, 2304, 2366
Eco57I CTGAAG 2 cut(s) 756, 1125
Eco81I CCTNAGG 1 cut(s) 210
Eco88I CYCGRG 2 cut(s) 2043, 2346
Eco91I GGTNACC 1 cut(s) 374
EcoO65I GGTNACC 1 cut(s) 374
EcoRII CCWGG 3 cut(s) 1276, 1513, 1903
EcoT14I CCWWGG 6 cut(s) 62, 314, 449, 1354, 2128, 2307
EcoT22I ATGCAT 1 cut(s) 1880
EcoT38I GRGCYC 1 cut(s) 1834
ErhI CCWWGG 6 cut(s) 62, 314, 449, 1354, 2128, 2307
FalI AAGNNNNNCTT 6 cut(s) 433, 465, 1135, 1167, 2304, 2336
FaqI GGGAC 1 cut(s) 2317
FauNDI CATATG 1 cut(s) 922
FokI GGATG 8 cut(s) 453, 1052, 1237, 1260, 1502, 1933, 2259, 2261
FriOI GRGCYC 1 cut(s) 1834
FspBI CTAG 6 cut(s) 138, 192, 492, 611, 1452, 1919
GsuI CTGGAG 2 cut(s) 654, 2315
HaeIII GGCC 5 cut(s) 208, 243, 435, 2018, 2114
HapII CCGG 1 cut(s) 804
HincII GTYRAC 2 cut(s) 321, 1365
HindII GTYRAC 2 cut(s) 321, 1365
HindIII AAGCTT 1 cut(s) 2318
HinfI GANTC 7 cut(s) 266, 475, 767, 776, 1595, 1662, 1931
HpaI GTTAAC 1 cut(s) 1365
HpaII CCGG 1 cut(s) 804
HphI GGTGA 4 cut(s) 227, 386, 710, 1967
Hpy166II GTNNAC 4 cut(s) 321, 860, 1365, 2200
Hpy188I TCNGA 9 cut(s) 10, 48, 227, 541, 775, 1672, 2098, 2212, 2424
Hpy8I GTNNAC 4 cut(s) 321, 860, 1365, 2200
HpyAV CCTTC 7 cut(s) 39, 435, 672, 710, 1100, 1770, 2306
HpyCH4III ACNGT 5 cut(s) 385, 1051, 1723, 2173, 2188
HpyCH4IV ACGT 7 cut(s) 38, 238, 846, 862, 1310, 1482, 2093
HpyF3I CTNAG 8 cut(s) 210, 750, 866, 1434, 1730, 1969, 2097, 2321
HpySE526I ACGT 7 cut(s) 38, 238, 846, 862, 1310, 1482, 2093
KspAI GTTAAC 1 cut(s) 1365
Kzo9I GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
LmnI GCTCC 3 cut(s) 736, 1084, 1771
MaeI CTAG 6 cut(s) 138, 192, 492, 611, 1452, 1919
MaeII ACGT 7 cut(s) 38, 238, 846, 862, 1310, 1482, 2093
MaeIII GTNAC 7 cut(s) 267, 374, 988, 1154, 1461, 1483, 1740
MalI GATC 9 cut(s) 12, 45, 507, 762, 933, 973, 1236, 1326, 1549
MbiI CCGCTC 2 cut(s) 249, 432
MboI GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
MboII GAAGA 7 cut(s) 363, 657, 762, 901, 1440, 1557, 2129
MfeI CAATTG 1 cut(s) 1083
MflI RGATCY 3 cut(s) 1234, 1324, 1547
MhlI GDGCHC 4 cut(s) 156, 1834, 2103, 2347
MlyI GAGTC 2 cut(s) 275, 761
MmeI TCCRAC 1 cut(s) 21
Mph1103I ATGCAT 1 cut(s) 1880
MroXI GAANNNNTTC 1 cut(s) 2418
MslI CAYNNNNRTG 2 cut(s) 90, 597
MspA1I CMGCKG 3 cut(s) 1196, 1703, 1771
MspCI CTTAAG 1 cut(s) 1615
MspI CCGG 1 cut(s) 804
MspR9I CCNGG 4 cut(s) 804, 1278, 1515, 1905
MunI CAATTG 1 cut(s) 1083
Mva1269I GAATGC 3 cut(s) 335, 1331, 1780
MvaI CCWGG 3 cut(s) 1278, 1515, 1905
MvnI CGCG 1 cut(s) 34
NciI CCSGG 1 cut(s) 804
NcoI CCATGG 2 cut(s) 62, 2128
NdeI CATATG 1 cut(s) 922
NdeII GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
NlaIV GGNNCC 3 cut(s) 660, 1961, 2305
NmeAIII GCCGAG 2 cut(s) 100, 1936
NmuCI GTSAC 7 cut(s) 267, 374, 988, 1154, 1461, 1483, 1740
NruI TCGCGA 1 cut(s) 34
NsiI ATGCAT 1 cut(s) 1880
NspI RCATGY 4 cut(s) 152, 985, 1878, 1882
OliI CACNNNNGTG 1 cut(s) 90
PaeI GCATGC 3 cut(s) 985, 1878, 1882
PaeR7I CTCGAG 1 cut(s) 2346
PagI TCATGA 1 cut(s) 508
PciI ACATGT 1 cut(s) 148
PctI GAATGC 3 cut(s) 335, 1331, 1780
PdmI GAANNNNTTC 1 cut(s) 2418
PfeI GAWTC 5 cut(s) 475, 776, 1595, 1662, 1931
PleI GAGTC 2 cut(s) 274, 761
PpsI GAGTC 2 cut(s) 274, 761
PscI ACATGT 1 cut(s) 148
PshBI ATTAAT 1 cut(s) 1685
Psp1406I AACGTT 3 cut(s) 38, 846, 1310
Psp6I CCWGG 3 cut(s) 1276, 1513, 1903
PspEI GGTNACC 1 cut(s) 374
PspGI CCWGG 3 cut(s) 1276, 1513, 1903
PspN4I GGNNCC 3 cut(s) 660, 1961, 2305
PspPI GGNCC 6 cut(s) 26, 206, 962, 1589, 2304, 2366
PstI CTGCAG 3 cut(s) 92, 1696, 1708
PstNI CAGNNNCTG 1 cut(s) 1703
PsuI RGATCY 3 cut(s) 1234, 1324, 1547
PvuII CAGCTG 2 cut(s) 1196, 1703
RruI TCGCGA 1 cut(s) 34
RsaI GTAC 5 cut(s) 1254, 1621, 2175, 2232, 2328
RsaNI GTAC 5 cut(s) 1253, 1620, 2174, 2231, 2327
RseI CAYNNNNRTG 2 cut(s) 90, 597
Sau3AI GATC 9 cut(s) 10, 43, 505, 760, 931, 971, 1234, 1324, 1547
Sau96I GGNCC 6 cut(s) 26, 206, 962, 1589, 2304, 2366
ScaI AGTACT 1 cut(s) 2232
SchI GAGTC 2 cut(s) 275, 761
ScrFI CCNGG 4 cut(s) 804, 1278, 1515, 1905
SduI GDGCHC 4 cut(s) 156, 1834, 2103, 2347
SfcI CTRYAG 4 cut(s) 88, 1197, 1692, 1704
Sfr274I CTCGAG 1 cut(s) 2346
SinI GGWCC 5 cut(s) 26, 962, 1589, 2304, 2366
SlaI CTCGAG 1 cut(s) 2346
SmiMI CAYNNNNRTG 2 cut(s) 90, 597
SmlI CTYRAG 5 cut(s) 789, 1615, 2009, 2192, 2346
SmoI CTYRAG 5 cut(s) 789, 1615, 2009, 2192, 2346
SphI GCATGC 3 cut(s) 985, 1878, 1882
SspMI CTAG 6 cut(s) 138, 192, 492, 611, 1452, 1919
StyD4I CCNGG 4 cut(s) 802, 1276, 1513, 1903
StyI CCWWGG 6 cut(s) 62, 314, 449, 1354, 2128, 2307
TaaI ACNGT 5 cut(s) 385, 1051, 1723, 2173, 2188
TaiI ACGT 7 cut(s) 41, 241, 849, 865, 1313, 1485, 2096
TaqI TCGA 6 cut(s) 568, 703, 1057, 1660, 2030, 2347
TatI WGTACW 1 cut(s) 2230
TauI GCSGC 4 cut(s) 277, 435, 919, 2127
TfiI GAWTC 5 cut(s) 475, 776, 1595, 1662, 1931
TseFI GTSAC 7 cut(s) 267, 374, 988, 1154, 1461, 1483, 1740
Tsp45I GTSAC 7 cut(s) 267, 374, 988, 1154, 1461, 1483, 1740
TspDTI ATGAA 9 cut(s) 17, 455, 525, 581, 1241, 1913, 2261, 2350, 2367
TspGWI ACGGA 5 cut(s) 136, 723, 975, 1502, 1907
Vha464I CTTAAG 1 cut(s) 1615
VpaK11BI GGWCC 5 cut(s) 26, 962, 1589, 2304, 2366
VspI ATTAAT 1 cut(s) 1685
XapI RAATTY 2 cut(s) 1228, 1289
XceI RCATGY 4 cut(s) 152, 985, 1878, 1882
XhoI CTCGAG 1 cut(s) 2346
XmnI GAANNNNTTC 1 cut(s) 2418
XspI CTAG 6 cut(s) 138, 192, 492, 611, 1452, 1919
ZrmI AGTACT 1 cut(s) 2232
Zsp2I ATGCAT 1 cut(s) 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.