isoform X1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF7725 | PF24851 | 549 - 619 | 5.9e-37 | Domain of unknown function (DUF7725) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1440 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 70 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1697 |
| AccII | CGCG | 1 cut(s) | 90 |
| AccIII | TCCGGA | 1 cut(s) | 1613 |
| AciI | CCGC | 5 cut(s) | 9, 12, 39, 476, 951 |
| AclWI | GGATC | 2 cut(s) | 313, 1453 |
| AcuI | CTGAAG | 4 cut(s) | 32, 573, 578, 854 |
| AdeI | CACNNNGTG | 1 cut(s) | 859 |
| AfaI | GTAC | 7 cut(s) | 674, 784, 1257, 1323, 1343, 1684, 1784 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 676, 1304, 1697 |
| AleI | CACNNNNGTG | 1 cut(s) | 1575 |
| Alw21I | GWGCWC | 4 cut(s) | 289, 855, 1867, 2015 |
| Alw26I | GTCTC | 4 cut(s) | 295, 1612, 1851, 1977 |
| Alw44I | GTGCAC | 2 cut(s) | 851, 1863 |
| AlwI | GGATC | 2 cut(s) | 313, 1453 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1916 |
| Aor13HI | TCCGGA | 1 cut(s) | 1613 |
| AoxI | GGCC | 1 cut(s) | 483 |
| ApaLI | GTGCAC | 2 cut(s) | 851, 1863 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 30 |
| AscI | GGCGCGCC | 1 cut(s) | 88 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1714 |
| AspLEI | GCGC | 5 cut(s) | 90, 92, 983, 1025, 1643 |
| AspS9I | GGNCC | 3 cut(s) | 483, 564, 1201 |
| AsuHPI | GGTGA | 2 cut(s) | 1551, 2038 |
| AsuNHI | GCTAGC | 2 cut(s) | 1747, 1808 |
| AvaII | GGWCC | 2 cut(s) | 564, 1201 |
| AxyI | CCTNAGG | 3 cut(s) | 1197, 1502, 1536 |
| BaeGI | GKGCMC | 3 cut(s) | 721, 855, 1867 |
| BanII | GRGCYC | 2 cut(s) | 289, 2015 |
| BauI | CACGAG | 2 cut(s) | 33, 714 |
| Bbv12I | GWGCWC | 4 cut(s) | 289, 855, 1867, 2015 |
| BccI | CCATC | 7 cut(s) | 188, 829, 1079, 1306, 1402, 1821, 1949 |
| BceAI | ACGGC | 2 cut(s) | 77, 81 |
| BciVI | GTATCC | 1 cut(s) | 506 |
| BclI | TGATCA | 1 cut(s) | 544 |
| BcoDI | GTCTC | 4 cut(s) | 295, 1612, 1851, 1977 |
| BfaI | CTAG | 7 cut(s) | 243, 369, 464, 1359, 1604, 1748, 1809 |
| BfmI | CTRYAG | 2 cut(s) | 1235, 1917 |
| BfuI | GTATCC | 1 cut(s) | 506 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1904 |
| BglII | AGATCT | 1 cut(s) | 401 |
| Bme18I | GGWCC | 2 cut(s) | 564, 1201 |
| BmgT120I | GGNCC | 3 cut(s) | 483, 564, 1201 |
| BmiI | GGNNCC | 8 cut(s) | 43, 69, 566, 907, 928, 956, 1121, 1203 |
| BmsI | GCATC | 8 cut(s) | 721, 955, 1174, 1263, 1303, 1486, 1683, 1892 |
| BmtI | GCTAGC | 2 cut(s) | 1751, 1812 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1616, 1648 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1248 |
| BpuEI | CTTGAG | 4 cut(s) | 642, 1287, 1838, 1959 |
| BsaWI | WCCGGW | 2 cut(s) | 920, 1613 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 676, 1304, 1697 |
| Bse1I | ACTGG | 1 cut(s) | 1766 |
| Bse21I | CCTNAGG | 3 cut(s) | 1197, 1502, 1536 |
| Bse3DI | GCAATG | 1 cut(s) | 1435 |
| BseAI | TCCGGA | 1 cut(s) | 1613 |
| BseGI | GGATG | 9 cut(s) | 199, 685, 1294, 1394, 1610, 1674, 1801, 1843, 1928 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 676, 1304, 1697 |
| BseMI | GCAATG | 1 cut(s) | 1435 |
| BseNI | ACTGG | 1 cut(s) | 1766 |
| BsePI | GCGCGC | 1 cut(s) | 88 |
| BseSI | GKGCMC | 3 cut(s) | 721, 855, 1867 |
| Bsh1236I | CGCG | 1 cut(s) | 90 |
| BshFI | GGCC | 1 cut(s) | 485 |
| BsiHKAI | GWGCWC | 4 cut(s) | 289, 855, 1867, 2015 |
| BsiSI | CCGG | 2 cut(s) | 921, 1614 |
| BslFI | GGGAC | 3 cut(s) | 550, 1187, 1577 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 676, 1304, 1697 |
| BsmAI | GTCTC | 4 cut(s) | 295, 1612, 1851, 1977 |
| BsmBI | CGTCTC | 1 cut(s) | 1851 |
| BsmFI | GGGAC | 3 cut(s) | 550, 1187, 1577 |
| BsmI | GAATGC | 2 cut(s) | 378, 1150 |
| BsnI | GGCC | 1 cut(s) | 485 |
| Bsp1286I | GDGCHC | 5 cut(s) | 289, 721, 855, 1867, 2015 |
| Bsp13I | TCCGGA | 1 cut(s) | 1613 |
| Bsp1407I | TGTACA | 1 cut(s) | 672 |
| Bsp143I | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| BspACI | CCGC | 5 cut(s) | 9, 12, 39, 476, 951 |
| BspANI | GGCC | 1 cut(s) | 485 |
| BspEI | TCCGGA | 1 cut(s) | 1613 |
| BspFNI | CGCG | 1 cut(s) | 90 |
| BspHI | TCATGA | 1 cut(s) | 388 |
| BspLI | GGNNCC | 8 cut(s) | 43, 69, 566, 907, 928, 956, 1121, 1203 |
| BspMAI | CTGCAG | 1 cut(s) | 1921 |
| BspOI | GCTAGC | 2 cut(s) | 1751, 1812 |
| BspPI | GGATC | 2 cut(s) | 313, 1453 |
| BsrDI | GCAATG | 1 cut(s) | 1435 |
| BsrGI | TGTACA | 1 cut(s) | 672 |
| BsrI | ACTGG | 1 cut(s) | 1766 |
| BssHII | GCGCGC | 1 cut(s) | 88 |
| BssMI | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| BssSI | CACGAG | 2 cut(s) | 33, 714 |
| Bst2BI | CACGAG | 2 cut(s) | 33, 714 |
| Bst4CI | ACNGT | 7 cut(s) | 138, 859, 1079, 1488, 1574, 1733, 1862 |
| Bst6I | CTCTTC | 3 cut(s) | 178, 426, 529 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 859, 989, 1916 |
| BstAUI | TGTACA | 1 cut(s) | 672 |
| BstC8I | GCNNGC | 5 cut(s) | 90, 765, 882, 1749, 1810 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 674 |
| BstF5I | GGATG | 9 cut(s) | 199, 685, 1294, 1394, 1610, 1674, 1801, 1843, 1928 |
| BstFNI | CGCG | 1 cut(s) | 90 |
| BstHHI | GCGC | 5 cut(s) | 90, 92, 983, 1025, 1643 |
| BstKTI | GATC | 5 cut(s) | 312, 321, 404, 547, 1448 |
| BstMAI | GTCTC | 4 cut(s) | 295, 1612, 1851, 1977 |
| BstMBI | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| BstNSI | RCATGY | 3 cut(s) | 455, 851, 1674 |
| BstSFI | CTRYAG | 2 cut(s) | 1235, 1917 |
| BstSLI | GKGCMC | 3 cut(s) | 721, 855, 1867 |
| BstUI | CGCG | 1 cut(s) | 90 |
| BstX2I | RGATCY | 3 cut(s) | 318, 401, 1445 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1013, 1948 |
| BstYI | RGATCY | 3 cut(s) | 318, 401, 1445 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1197, 1502, 1536 |
| BsuI | GTATCC | 1 cut(s) | 506 |
| BsuRI | GGCC | 1 cut(s) | 485 |
| BtsCI | GGATG | 9 cut(s) | 199, 685, 1294, 1394, 1610, 1674, 1801, 1843, 1928 |
| BtsI | GCAGTG | 1 cut(s) | 1422 |
| BtsIMutI | CAGTG | 6 cut(s) | 634, 864, 1233, 1422, 1579, 1759 |
| Cac8I | GCNNGC | 5 cut(s) | 90, 765, 882, 1749, 1810 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1916 |
| CciI | TCATGA | 1 cut(s) | 388 |
| CfoI | GCGC | 5 cut(s) | 90, 92, 983, 1025, 1643 |
| Cfr13I | GGNCC | 3 cut(s) | 483, 564, 1201 |
| Csp6I | GTAC | 7 cut(s) | 673, 783, 1256, 1322, 1342, 1683, 1783 |
| CviQI | GTAC | 7 cut(s) | 673, 783, 1256, 1322, 1342, 1683, 1783 |
| DpnI | GATC | 5 cut(s) | 311, 320, 403, 546, 1447 |
| DpnII | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| DraIII | CACNNNGTG | 1 cut(s) | 859 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 70 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 70 |
| Eam1104I | CTCTTC | 3 cut(s) | 178, 426, 529 |
| EarI | CTCTTC | 3 cut(s) | 178, 426, 529 |
| Ecl136II | GAGCTC | 2 cut(s) | 287, 2013 |
| Eco24I | GRGCYC | 2 cut(s) | 289, 2015 |
| Eco32I | GATATC | 1 cut(s) | 1092 |
| Eco47I | GGWCC | 2 cut(s) | 564, 1201 |
| Eco53kI | GAGCTC | 2 cut(s) | 287, 2013 |
| Eco57I | CTGAAG | 4 cut(s) | 32, 573, 578, 854 |
| Eco81I | CCTNAGG | 3 cut(s) | 1197, 1502, 1536 |
| EcoICRI | GAGCTC | 2 cut(s) | 287, 2013 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 674 |
| EcoO109I | RGGNCCY | 2 cut(s) | 564, 1201 |
| EcoRV | GATATC | 1 cut(s) | 1092 |
| EcoT22I | ATGCAT | 2 cut(s) | 1167, 1676 |
| EcoT38I | GRGCYC | 2 cut(s) | 289, 2015 |
| Esp3I | CGTCTC | 1 cut(s) | 1851 |
| FaqI | GGGAC | 3 cut(s) | 550, 1187, 1577 |
| FauI | CCCGC | 1 cut(s) | 944 |
| FbaI | TGATCA | 1 cut(s) | 544 |
| FokI | GGATG | 9 cut(s) | 206, 692, 1281, 1381, 1597, 1661, 1808, 1850, 1915 |
| FriOI | GRGCYC | 2 cut(s) | 289, 2015 |
| FspBI | CTAG | 7 cut(s) | 243, 369, 464, 1359, 1604, 1748, 1809 |
| GlaI | GCGC | 5 cut(s) | 89, 91, 982, 1024, 1642 |
| HaeIII | GGCC | 1 cut(s) | 485 |
| HapII | CCGG | 2 cut(s) | 921, 1614 |
| HhaI | GCGC | 5 cut(s) | 90, 92, 983, 1025, 1643 |
| Hin6I | GCGC | 5 cut(s) | 88, 90, 981, 1023, 1641 |
| HinP1I | GCGC | 5 cut(s) | 88, 90, 981, 1023, 1641 |
| HpaII | CCGG | 2 cut(s) | 921, 1614 |
| HphI | GGTGA | 2 cut(s) | 1551, 2038 |
| Hpy166II | GTNNAC | 3 cut(s) | 853, 1268, 1865 |
| Hpy8I | GTNNAC | 3 cut(s) | 853, 1268, 1865 |
| Hpy99I | CGWCG | 2 cut(s) | 61, 67 |
| HpyAV | CCTTC | 3 cut(s) | 56, 1133, 1215 |
| HpyCH4III | ACNGT | 7 cut(s) | 138, 859, 1079, 1488, 1574, 1733, 1862 |
| HpyCH4IV | ACGT | 1 cut(s) | 781 |
| HpySE526I | ACGT | 1 cut(s) | 781 |
| HspAI | GCGC | 5 cut(s) | 88, 90, 981, 1023, 1641 |
| Kpn2I | TCCGGA | 1 cut(s) | 1613 |
| Ksp22I | TGATCA | 1 cut(s) | 544 |
| Kzo9I | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| LmnI | GCTCC | 4 cut(s) | 73, 379, 598, 926 |
| LweI | GCATC | 8 cut(s) | 721, 955, 1174, 1263, 1303, 1486, 1683, 1892 |
| MaeI | CTAG | 7 cut(s) | 243, 369, 464, 1359, 1604, 1748, 1809 |
| MaeII | ACGT | 1 cut(s) | 781 |
| MalI | GATC | 5 cut(s) | 311, 320, 403, 546, 1447 |
| MboI | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| MboII | GAAGA | 5 cut(s) | 195, 443, 546, 1473, 1999 |
| MflI | RGATCY | 3 cut(s) | 318, 401, 1445 |
| MhlI | GDGCHC | 5 cut(s) | 289, 721, 855, 1867, 2015 |
| MluCI | AATT | 5 cut(s) | 257, 341, 632, 770, 959 |
| MlyI | GAGTC | 2 cut(s) | 628, 1951 |
| MmeI | TCCRAC | 2 cut(s) | 249, 686 |
| Mph1103I | ATGCAT | 2 cut(s) | 1167, 1676 |
| MroI | TCCGGA | 1 cut(s) | 1613 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1714 |
| MseI | TTAA | 4 cut(s) | 140, 234, 459, 1982 |
| MslI | CAYNNNNRTG | 5 cut(s) | 393, 1011, 1575, 1764, 1946 |
| MspA1I | CMGCKG | 3 cut(s) | 951, 1694, 1916 |
| MspI | CCGG | 2 cut(s) | 921, 1614 |
| Mva1269I | GAATGC | 2 cut(s) | 378, 1150 |
| MvnI | CGCG | 1 cut(s) | 90 |
| NdeII | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| NheI | GCTAGC | 2 cut(s) | 1747, 1808 |
| NlaIV | GGNNCC | 8 cut(s) | 43, 69, 566, 907, 928, 956, 1121, 1203 |
| NsiI | ATGCAT | 2 cut(s) | 1167, 1676 |
| NspI | RCATGY | 3 cut(s) | 455, 851, 1674 |
| OliI | CACNNNNGTG | 1 cut(s) | 1575 |
| PagI | TCATGA | 1 cut(s) | 388 |
| PalAI | GGCGCGCC | 1 cut(s) | 88 |
| PauI | GCGCGC | 1 cut(s) | 88 |
| PctI | GAATGC | 2 cut(s) | 378, 1150 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1714 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1697 |
| PleI | GAGTC | 2 cut(s) | 627, 1951 |
| PpsI | GAGTC | 2 cut(s) | 627, 1951 |
| PpuMI | RGGWCCY | 2 cut(s) | 564, 1201 |
| PsiI | TTATAA | 1 cut(s) | 1440 |
| Psp124BI | GAGCTC | 2 cut(s) | 289, 2015 |
| Psp5II | RGGWCCY | 2 cut(s) | 564, 1201 |
| PspN4I | GGNNCC | 8 cut(s) | 43, 69, 566, 907, 928, 956, 1121, 1203 |
| PspPI | GGNCC | 3 cut(s) | 483, 564, 1201 |
| PspPPI | RGGWCCY | 2 cut(s) | 564, 1201 |
| PstI | CTGCAG | 1 cut(s) | 1921 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1916 |
| PsuI | RGATCY | 3 cut(s) | 318, 401, 1445 |
| PteI | GCGCGC | 1 cut(s) | 88 |
| PvuII | CAGCTG | 2 cut(s) | 1694, 1916 |
| RsaI | GTAC | 7 cut(s) | 674, 784, 1257, 1323, 1343, 1684, 1784 |
| RsaNI | GTAC | 7 cut(s) | 673, 783, 1256, 1322, 1342, 1683, 1783 |
| RseI | CAYNNNNRTG | 5 cut(s) | 393, 1011, 1575, 1764, 1946 |
| SacI | GAGCTC | 2 cut(s) | 289, 2015 |
| SaqAI | TTAA | 4 cut(s) | 140, 234, 459, 1982 |
| Sau3AI | GATC | 5 cut(s) | 309, 318, 401, 544, 1445 |
| Sau96I | GGNCC | 3 cut(s) | 483, 564, 1201 |
| SchI | GAGTC | 2 cut(s) | 628, 1951 |
| SduI | GDGCHC | 5 cut(s) | 289, 721, 855, 1867, 2015 |
| SfaNI | GCATC | 8 cut(s) | 721, 955, 1174, 1263, 1303, 1486, 1683, 1892 |
| SfcI | CTRYAG | 2 cut(s) | 1235, 1917 |
| SgsI | GGCGCGCC | 1 cut(s) | 88 |
| SinI | GGWCC | 2 cut(s) | 564, 1201 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 393, 1011, 1575, 1764, 1946 |
| SmlI | CTYRAG | 4 cut(s) | 657, 1302, 1817, 1974 |
| SmoI | CTYRAG | 4 cut(s) | 657, 1302, 1817, 1974 |
| Sse9I | AATT | 5 cut(s) | 257, 341, 632, 770, 959 |
| SsiI | CCGC | 5 cut(s) | 9, 12, 39, 476, 951 |
| SspMI | CTAG | 7 cut(s) | 243, 369, 464, 1359, 1604, 1748, 1809 |
| SstI | GAGCTC | 2 cut(s) | 289, 2015 |
| TaaI | ACNGT | 7 cut(s) | 138, 859, 1079, 1488, 1574, 1733, 1862 |
| TaiI | ACGT | 1 cut(s) | 784 |
| TaqI | TCGA | 4 cut(s) | 17, 283, 1650, 1829 |
| TasI | AATT | 5 cut(s) | 257, 341, 632, 770, 959 |
| TatI | WGTACW | 1 cut(s) | 672 |
| TauI | GCSGC | 2 cut(s) | 14, 479 |
| Tru1I | TTAA | 4 cut(s) | 140, 234, 459, 1982 |
| Tru9I | TTAA | 4 cut(s) | 140, 234, 459, 1982 |
| TscAI | CASTG | 6 cut(s) | 634, 864, 1233, 1422, 1579, 1766 |
| TspDTI | ATGAA | 8 cut(s) | 348, 377, 486, 1143, 1301, 1422, 1581, 1668 |
| TspGWI | ACGGA | 6 cut(s) | 45, 60, 1359, 1392, 1481, 1670 |
| TspRI | CASTG | 6 cut(s) | 634, 864, 1233, 1422, 1579, 1766 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1697 |
| VneI | GTGCAC | 2 cut(s) | 851, 1863 |
| VpaK11BI | GGWCC | 2 cut(s) | 564, 1201 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 674 |
| XbaI | TCTAGA | 1 cut(s) | 242 |
| XceI | RCATGY | 3 cut(s) | 455, 851, 1674 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 121, 806 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1714 |
| XspI | CTAG | 7 cut(s) | 243, 369, 464, 1359, 1604, 1748, 1809 |
| Zsp2I | ATGCAT | 2 cut(s) | 1167, 1676 |