Rroxscaffold_4G00277990

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0002123
Physical Location & Seq
Reverse (-)
1163592 .. 1169320
5729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00277990.1

Sequence Viewer

Length: 2634 bp
ATGGAGGCTACGGCCGCCGCGCGCGGTGGTTCGATGCCGGCGATGACGCAAGCTCAGACTCGCAAGCAGTGGCGCGCCGTCTCGGAGCATCATTCGGCTCGGAACATCGGCGATGAGGAGCTGGAGCGATCAAAGTTAGGCCATTCTGATGAGAGAACAATATATGAGGTAAGGATTTCGGGACCAGTGATAAGTTATGTTTTCAAAGATTCGCCTGAAAGCGGAAATGATTTGTCGTTTTTCAAGGTGCAGCAGGGAAGAGAGCCAGTTGATGTAGACTTTTGTTCGATCTCCATAGATGGGACTTTGGACCGTGACCTCTTGCAGCAGCGGCTTCATGATGTTGTCAGGCAAAGAGAGGAACTGCAGCATATGGAGACTGAGCTTAGAGCTCAAATGATTGCAAGATCTGAGATAATGGATATACAAAATAACTTTGATGCTCAACTGAAGGAGCATGCTAATGCTGCTTCCAAGCTTCAGGAGCAACTCCATGCAAAGGAGCAGGCCATACATGATTTGGAGAGGGAATTGGAAGAAAAAGATAGAGAGCTGCATGCTACCAAGTTAGATAATGAAGCGGCCTGGGCCAAAGAGGGCCTTCTTAGAGAACAGAACAAAGAATTAGCAACTTTCAGAAGAGAGCGTGACCATTCAGAAGCTGAAAGAGCCCAGCATATACAGCAATTACATGATCTTCAAGAACATATTCAAGAAAAAGAGAGCCAACTGATAGAGTTGCAGGAACAGCATAGGCTTGCTCAAGAAGCCATTCTATTTAAGGATGAACAACTGAGCGAAGCCCAAGCTTGGATCACCCGTGTTCAAGAAATGGATGCTTTGCAGTCAACTACACTTCAAAATCAGTTGCGGGAACATTCAGAACACTATAATCAGCTCTGGCTTGGTTGGCAAAGACAGTTTGCTGAAATGGAGAGACATCATATGCATACGGTACAACAGCTTCAGCTTGAGTTAGCTGATGCCAGACAAAGAAGTGGAACTTACACCGATGAATCACGTGCAGCAAATTCAACTTCAAAGGATGCATCTCAGTTTGGTCGGAACAATGGAAACCAGATTGATATAAATACGTCAAATGGAAATACAGGGGCCCTCCCAAATGGGAATTCACAGGACGTTTCATCGTTTTCTTCAACTGTCAATGCATCAAGTCAGGTTGACCATGTTCCTAGTGTTCCAATTGGTCCTTCGTCTCTACTTGGGATGCCTCCCTTTCTTCCACCTGGACAGGTGACTGGTATGCATCCATTTGTTCTGCATCAACCTGGGGTTCCCCATTCCATGCCACCACAGGTTCCTCAATCACATGTGGGGAATTTTCACTCAATACCTGCAATGTCATCTCTCCAACAGTGGCAGAACCAACAGGCTCCATCCGAGAGTTTGCAGATAGCTACACAAACTGAACCTCCATCTTCCCAAAATGATCAAAACCTGATAAGATCAGATGCAAAGTATCACTATGAAACTTCTGTTAACGGGCAACCATTTCATCAAGACTATTTGGATGTTCAAATTCGCGAAGGGGCTGAGCCTGAGCCTGTGATATCATCTTCCCCCGAGGAAGCACAGGTTCTTGAGTCAATTAATAGCAGTTACTTGGTCTCACCCCAAACTGATCAGAGCTTGCAACAAATGTCTTCCCAATTTACTGATTCTTTAAGATTGGATTCTCTTGAGAAGAGCAGTGAAACCAAGGCACATGAGCAGAATGTTCAGACCTTGATCGATCATGGGTTGGACGGACAAGTTTTAACGGCTGAGAAACCAAATTCTGCTACCAAGTCCTCAAAATCTGACACTCCAATCCATTCAGTCAATCTCAATGAAATTACAATAAACAATTCCCCTGGTACAGGTTTGCCTGAGTCCTTTGTCTCAACTGGACACACCAATGCACCATCAGCGGGTAGGACTTCGGAGACCGCTCTTCTAGATGAAAGGTCATTGTTGGCTTGCATGGTTCGGACAATACCAGCTGGTGGTAGAATTAGGATCAGTTCGACGCTGCCGAATAGGCTCGGGAAGATGCTTGCACCTTTACACTGGCATGATTACAAGAAAAAGTATGGAAAGCTAGATGATTTCGTTGCTGCTCATACTGAACTATTTGTGATTGAGGGGGACTATATTCAGCTGCGTGAAGGAGCTCAAGAGATGATAGCAGCTACAGCCGCCGTTGCCAGAGTTGCTGCTGCTGCAGCAGCATCATCCCCCTACTCTTCATGTTTGCCTTCTGTGGCTGTTACTCCAGTGGCACAGACTCACCGCTTAAAGAAGGTATCATCTCTTGATTCCAAAAATGTGGTTACTTCTACTCCAAATGCAAATAATGCTCACTTGCAGTCTGTGAAGCAGAATCAGCAATTAAATGGTGTATCTTTTGGTGTTTCGGGAGGTATGTCGAACGTAAAAATTTTGAGCAAATCCAAGGACATGAATGGGCCTGAACCTACTCCCAGCCAGTCATCTGTACTTCTTAATGGTGGAAATGGTGCTCCTCTGGACAGATCAATGGCCAATGGAAGGCCGAGCTCAAATTTTGTTGGGAAACAGCATGGCAGGACTTCAGGAGCAGTCACACCATCTTTTGCCCCGAAAGTGTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

877

Amino Acids

96.87

Weight (kDa)

5.65

Isoelectric Point (pI)

56.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7725 PF24851 652 - 722 9.1e-39 Domain of unknown function (DUF7725)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1363
AccB7I CCANNNNNTGG 1 cut(s) 2006
AccBSI CCGCTC 1 cut(s) 1952
AccI GTMKAC 1 cut(s) 276
AccII CGCG 5 cut(s) 20, 22, 24, 75, 1545
AclWI GGATC 2 cut(s) 821, 2027
AcoI YGGCCR 2 cut(s) 12, 2541
AcsI RAATTY 7 cut(s) 1030, 1129, 1339, 1539, 1795, 2439, 2563
AcuI CTGAAG 4 cut(s) 464, 470, 950, 2577
AcvI CACGTG 1 cut(s) 1022
AfaI GTAC 4 cut(s) 957, 1879, 2499, 2630
AfiI CCNNNNNNNGG 8 cut(s) 221, 300, 499, 810, 1880, 1931, 2006, 2550
AflIII ACRYGT 1 cut(s) 1330
AjnI CCWGG 4 cut(s) 584, 1246, 1288, 1873
AjuI GAANNNNNNNTTGG 4 cut(s) 1114, 1146, 1195, 1227
Alw21I GWGCWC 4 cut(s) 394, 2176, 2524, 2561
Alw26I GTCTC 7 cut(s) 85, 371, 931, 1221, 1633, 1906, 1940
AlwI GGATC 2 cut(s) 821, 2027
AlwNI CAGNNNCTG 1 cut(s) 662
Ama87I CYCGRG 2 cut(s) 1583, 2045
ApaI GGGCCC 1 cut(s) 1117
ApoI RAATTY 7 cut(s) 1030, 1129, 1339, 1539, 1795, 2439, 2563
AscI GGCGCGCC 1 cut(s) 73
AseI ATTAAT 1 cut(s) 1611
Asp700I GAANNNNTTC 2 cut(s) 708, 771
AspLEI GCGC 4 cut(s) 22, 24, 75, 77
AspS9I GGNCC 8 cut(s) 182, 310, 588, 598, 1113, 1114, 1208, 2468
AsuHPI GGTGA 4 cut(s) 808, 1267, 1623, 2282
AvaI CYCGRG 2 cut(s) 1583, 2045
AvaII GGWCC 3 cut(s) 182, 310, 1208
BaeGI GKGCMC 1 cut(s) 1117
BalI TGGCCA 1 cut(s) 2543
BanII GRGCYC 5 cut(s) 394, 673, 1117, 2176, 2561
BarI GAAGNNNNNNTAC 2 cut(s) 948, 980
BbrPI CACGTG 1 cut(s) 1022
BbsI GAAGAC 1 cut(s) 1656
Bbv12I GWGCWC 4 cut(s) 394, 2176, 2524, 2561
BccI CCATC 5 cut(s) 293, 1405, 1444, 1933, 2617
BceAI ACGGC 4 cut(s) 27, 62, 1797, 2186
BciT130I CCWGG 4 cut(s) 586, 1248, 1290, 1875
BclI TGATCA 2 cut(s) 1450, 1642
BcoDI GTCTC 7 cut(s) 85, 371, 931, 1221, 1633, 1906, 1940
BfaI CTAG 4 cut(s) 1194, 1958, 2102, 2632
BfmI CTRYAG 3 cut(s) 365, 2193, 2223
BfuAI ACCTGC 1 cut(s) 1363
BglI GCCNNNNNGGC 1 cut(s) 2041
BglII AGATCT 1 cut(s) 407
BlpI GCTNAGC 1 cut(s) 1554
Bme1390I CCNGG 4 cut(s) 586, 1248, 1290, 1875
Bme18I GGWCC 3 cut(s) 182, 310, 1208
BmeT110I CYCGRG 2 cut(s) 1583, 2045
BmgT120I GGNCC 8 cut(s) 182, 310, 588, 598, 1113, 1114, 1208, 2468
BmiI GGNNCC 6 cut(s) 183, 1114, 1115, 1296, 1320, 1395
BmrFI CCNGG 4 cut(s) 586, 1248, 1290, 1875
BpiI GAAGAC 1 cut(s) 1656
BpmI CTGGAG 2 cut(s) 143, 2259
Bpu10I CCTNAGC 1 cut(s) 1560
Bpu1102I GCTNAGC 1 cut(s) 1554
BpuEI CTTGAG 5 cut(s) 747, 992, 1622, 1721, 2160
Bsa29I ATCGAT 1 cut(s) 1752
BsaAI YACGTR 1 cut(s) 1022
BsaI GGTCTC 2 cut(s) 1633, 1940
BsaJI CCNNGG 6 cut(s) 585, 1289, 1584, 1719, 1873, 2454
BsaXI ACNNNNNCTCC 4 cut(s) 1417, 1447, 2326, 2356
Bsc4I CCNNNNNNNGG 8 cut(s) 221, 300, 499, 810, 1880, 1931, 2006, 2550
Bse118I RCCGGY 1 cut(s) 37
Bse1I ACTGG 7 cut(s) 185, 266, 1264, 1912, 2075, 2276, 2488
Bse3DI GCAATG 1 cut(s) 1365
BseBI CCWGG 4 cut(s) 586, 1248, 1290, 1875
BseCI ATCGAT 1 cut(s) 1752
BseDI CCNNGG 6 cut(s) 585, 1289, 1584, 1719, 1873, 2454
BseGI GGATG 8 cut(s) 790, 841, 1051, 1233, 1267, 1397, 1537, 2234
BseLI CCNNNNNNNGG 8 cut(s) 221, 300, 499, 810, 1880, 1931, 2006, 2550
BseMI GCAATG 1 cut(s) 1365
BseMII CTCAG 9 cut(s) 68, 372, 402, 785, 1067, 1545, 1551, 1776, 1881
BseNI ACTGG 7 cut(s) 185, 266, 1264, 1912, 2075, 2276, 2488
BsePI GCGCGC 2 cut(s) 20, 73
BseRI GAGGAG 2 cut(s) 131, 2514
BseSI GKGCMC 1 cut(s) 1117
BseX3I CGGCCG 1 cut(s) 12
BseYI CCCAGC 2 cut(s) 672, 2483
BsgI GTGCAG 2 cut(s) 269, 1044
Bsh1236I CGCG 5 cut(s) 20, 22, 24, 75, 1545
Bsh1285I CGRYCG 1 cut(s) 15
BshVI ATCGAT 1 cut(s) 1752
BsiEI CGRYCG 1 cut(s) 15
BsiHKAI GWGCWC 4 cut(s) 394, 2176, 2524, 2561
BsiHKCI CYCGRG 2 cut(s) 1583, 2045
BsiSI CCGG 1 cut(s) 38
BslFI GGGAC 3 cut(s) 195, 316, 2162
BslI CCNNNNNNNGG 8 cut(s) 221, 300, 499, 810, 1880, 1931, 2006, 2550
BsmAI GTCTC 7 cut(s) 85, 371, 931, 1221, 1633, 1906, 1940
BsmBI CGTCTC 2 cut(s) 85, 1221
BsmFI GGGAC 3 cut(s) 195, 316, 2162
Bso31I GGTCTC 2 cut(s) 1633, 1940
BsoBI CYCGRG 2 cut(s) 1583, 2045
Bsp120I GGGCCC 1 cut(s) 1113
Bsp1286I GDGCHC 6 cut(s) 394, 673, 1117, 2176, 2524, 2561
Bsp1720I GCTNAGC 1 cut(s) 1554
Bsp68I TCGCGA 1 cut(s) 1545
BspCNI CTCAG 9 cut(s) 67, 373, 403, 786, 1066, 1546, 1552, 1777, 1882
BspDI ATCGAT 1 cut(s) 1752
BspFNI CGCG 5 cut(s) 20, 22, 24, 75, 1545
BspHI TCATGA 1 cut(s) 337
BspLI GGNNCC 6 cut(s) 183, 1114, 1115, 1296, 1320, 1395
BspMAI CTGCAG 2 cut(s) 369, 2227
BspMI ACCTGC 1 cut(s) 1363
BspPI GGATC 2 cut(s) 821, 2027
BspQI GCTCTTC 2 cut(s) 1700, 1959
BspTNI GGTCTC 2 cut(s) 1633, 1940
BsrBI CCGCTC 1 cut(s) 1952
BsrDI GCAATG 1 cut(s) 1365
BsrFI RCCGGY 1 cut(s) 37
BsrI ACTGG 7 cut(s) 185, 266, 1264, 1912, 2075, 2276, 2488
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 6 cut(s) 585, 1289, 1584, 1719, 1873, 2454
BssHII GCGCGC 2 cut(s) 20, 73
BssT1I CCWWGG 2 cut(s) 1719, 2454
Bst2UI CCWGG 4 cut(s) 586, 1248, 1290, 1875
Bst4CI ACNGT 5 cut(s) 314, 921, 955, 1162, 1377
Bst6I CTCTTC 5 cut(s) 253, 634, 1700, 1959, 2251
BstAPI GCANNNNNTGC 1 cut(s) 2357
BstBAI YACGTR 1 cut(s) 1022
BstENI CCTNNNNNAGG 1 cut(s) 1878
BstF5I GGATG 8 cut(s) 790, 841, 1051, 1233, 1267, 1397, 1537, 2234
BstFNI CGCG 5 cut(s) 20, 22, 24, 75, 1545
BstHHI GCGC 4 cut(s) 22, 24, 75, 77
BstMAI GTCTC 7 cut(s) 85, 371, 931, 1221, 1633, 1906, 1940
BstMCI CGRYCG 1 cut(s) 15
BstNI CCWGG 4 cut(s) 586, 1248, 1290, 1875
BstNSI RCATGY 3 cut(s) 461, 560, 1334
BstSCI CCNGG 4 cut(s) 584, 1246, 1288, 1873
BstSFI CTRYAG 3 cut(s) 365, 2193, 2223
BstSLI GKGCMC 1 cut(s) 1117
BstUI CGCG 5 cut(s) 20, 22, 24, 75, 1545
BstV2I GAAGAC 1 cut(s) 1656
BstX2I RGATCY 1 cut(s) 407
BstXI CCANNNNNNTGG 1 cut(s) 2329
BstYI RGATCY 1 cut(s) 407
BstZI CGGCCG 1 cut(s) 12
Bsu15I ATCGAT 1 cut(s) 1752
BsuTUI ATCGAT 1 cut(s) 1752
BtgZI GCGATG 2 cut(s) 56, 126
BtsCI GGATG 8 cut(s) 790, 841, 1051, 1233, 1267, 1397, 1537, 2234
BtsI GCAGTG 2 cut(s) 74, 1717
BtsIMutI CAGTG 6 cut(s) 74, 192, 1382, 1717, 2068, 2283
BtuMI TCGCGA 1 cut(s) 1545
BveI ACCTGC 1 cut(s) 1363
CaiI CAGNNNCTG 1 cut(s) 662
CciI TCATGA 1 cut(s) 337
CfoI GCGC 4 cut(s) 22, 24, 75, 77
Cfr10I RCCGGY 1 cut(s) 37
Cfr13I GGNCC 8 cut(s) 182, 310, 588, 598, 1113, 1114, 1208, 2468
ClaI ATCGAT 1 cut(s) 1752
CseI GACGC 2 cut(s) 55, 2038
Csp6I GTAC 4 cut(s) 956, 1878, 2498, 2629
CviQI GTAC 4 cut(s) 956, 1878, 2498, 2629
EaeI YGGCCR 2 cut(s) 12, 2541
EagI CGGCCG 1 cut(s) 12
Eam1104I CTCTTC 5 cut(s) 253, 634, 1700, 1959, 2251
EarI CTCTTC 5 cut(s) 253, 634, 1700, 1959, 2251
Ecl136II GAGCTC 3 cut(s) 392, 2174, 2559
EclXI CGGCCG 1 cut(s) 12
Eco130I CCWWGG 2 cut(s) 1719, 2454
Eco24I GRGCYC 5 cut(s) 394, 673, 1117, 2176, 2561
Eco31I GGTCTC 2 cut(s) 1633, 1940
Eco32I GATATC 1 cut(s) 1572
Eco47I GGWCC 3 cut(s) 182, 310, 1208
Eco52I CGGCCG 1 cut(s) 12
Eco53kI GAGCTC 3 cut(s) 392, 2174, 2559
Eco57I CTGAAG 4 cut(s) 464, 470, 950, 2577
Eco72I CACGTG 1 cut(s) 1022
Eco88I CYCGRG 2 cut(s) 1583, 2045
EcoICRI GAGCTC 3 cut(s) 392, 2174, 2559
EcoNI CCTNNNNNAGG 1 cut(s) 1878
EcoO109I RGGNCCY 3 cut(s) 598, 1113, 1114
EcoRI GAATTC 1 cut(s) 1129
EcoRII CCWGG 4 cut(s) 584, 1246, 1288, 1873
EcoRV GATATC 1 cut(s) 1572
EcoT14I CCWWGG 2 cut(s) 1719, 2454
EcoT22I ATGCAT 4 cut(s) 951, 1051, 1171, 1269
EcoT38I GRGCYC 5 cut(s) 394, 673, 1117, 2176, 2561
ErhI CCWWGG 2 cut(s) 1719, 2454
Esp3I CGTCTC 2 cut(s) 85, 1221
FalI AAGNNNNNCTT 4 cut(s) 585, 617, 988, 1020
FaqI GGGAC 3 cut(s) 195, 316, 2162
FauI CCCGC 2 cut(s) 864, 1924
FauNDI CATATG 2 cut(s) 372, 945
FbaI TGATCA 2 cut(s) 1450, 1642
FblI GTMKAC 1 cut(s) 276
FokI GGATG 8 cut(s) 797, 848, 1058, 1240, 1254, 1384, 1544, 2221
FriOI GRGCYC 5 cut(s) 394, 673, 1117, 2176, 2561
FspBI CTAG 4 cut(s) 1194, 1958, 2102, 2632
GlaI GCGC 4 cut(s) 21, 23, 74, 76
GsaI CCCAGC 2 cut(s) 676, 2487
GsuI CTGGAG 2 cut(s) 143, 2259
HapII CCGG 1 cut(s) 38
HgaI GACGC 2 cut(s) 55, 2038
HhaI GCGC 4 cut(s) 22, 24, 75, 77
Hin6I GCGC 4 cut(s) 20, 22, 73, 75
HinP1I GCGC 4 cut(s) 20, 22, 73, 75
HincII GTYRAC 3 cut(s) 849, 1183, 1501
HindII GTYRAC 3 cut(s) 849, 1183, 1501
HindIII AAGCTT 2 cut(s) 476, 807
HpaI GTTAAC 1 cut(s) 1501
HpaII CCGG 1 cut(s) 38
HphI GGTGA 4 cut(s) 808, 1267, 1623, 2282
Hpy166II GTNNAC 5 cut(s) 277, 849, 1183, 1501, 2629
Hpy8I GTNNAC 5 cut(s) 277, 849, 1183, 1501, 2629
Hpy99I CGWCG 1 cut(s) 2032
HpyAV CCTTC 8 cut(s) 445, 611, 1221, 1541, 2162, 2268, 2296, 2544
HpyCH4III ACNGT 5 cut(s) 314, 921, 955, 1162, 1377
HpyCH4IV ACGT 4 cut(s) 1021, 1094, 1140, 2433
HpySE526I ACGT 4 cut(s) 1021, 1094, 1140, 2433
HspAI GCGC 4 cut(s) 20, 22, 73, 75
KroI GCCGGC 1 cut(s) 37
KroNI GCCGGC 1 cut(s) 39
Ksp22I TGATCA 2 cut(s) 1450, 1642
KspAI GTTAAC 1 cut(s) 1501
LguI GCTCTTC 2 cut(s) 1700, 1959
MaeI CTAG 4 cut(s) 1194, 1958, 2102, 2632
MaeII ACGT 4 cut(s) 1021, 1094, 1140, 2433
MaeIII GTNAC 7 cut(s) 314, 647, 1255, 1619, 2269, 2332, 2602
MauBI CGCGCGCG 1 cut(s) 20
MbiI CCGCTC 1 cut(s) 1952
MfeI CAATTG 1 cut(s) 1203
MflI RGATCY 1 cut(s) 407
MhlI GDGCHC 6 cut(s) 394, 673, 1117, 2176, 2524, 2561
MlsI TGGCCA 1 cut(s) 2543
MluNI TGGCCA 1 cut(s) 2543
MlyI GAGTC 4 cut(s) 52, 1613, 1901, 2281
MmeI TCCRAC 3 cut(s) 1043, 1396, 1743
Mox20I TGGCCA 1 cut(s) 2543
Mph1103I ATGCAT 4 cut(s) 951, 1051, 1171, 1269
MroNI GCCGGC 1 cut(s) 37
MroXI GAANNNNTTC 2 cut(s) 708, 771
MscI TGGCCA 1 cut(s) 2543
MseI TTAA 8 cut(s) 780, 1500, 1611, 1685, 1778, 2297, 2393, 2505
MslI CAYNNNNRTG 4 cut(s) 147, 462, 1917, 2073
Msp20I TGGCCA 1 cut(s) 2543
MspA1I CMGCKG 4 cut(s) 331, 1931, 2003, 2161
MspI CCGG 1 cut(s) 38
MspR9I CCNGG 4 cut(s) 586, 1248, 1290, 1875
MunI CAATTG 1 cut(s) 1203
MvaI CCWGG 4 cut(s) 586, 1248, 1290, 1875
MvnI CGCG 5 cut(s) 20, 22, 24, 75, 1545
NaeI GCCGGC 1 cut(s) 39
NdeI CATATG 2 cut(s) 372, 945
NgoMIV GCCGGC 1 cut(s) 37
NlaIV GGNNCC 6 cut(s) 183, 1114, 1115, 1296, 1320, 1395
NmeAIII GCCGAG 1 cut(s) 2580
NmuCI GTSAC 4 cut(s) 314, 647, 1255, 2602
NruI TCGCGA 1 cut(s) 1545
NsiI ATGCAT 4 cut(s) 951, 1051, 1171, 1269
NspI RCATGY 3 cut(s) 461, 560, 1334
PaeI GCATGC 2 cut(s) 461, 560
PagI TCATGA 1 cut(s) 337
PalAI GGCGCGCC 1 cut(s) 73
PauI GCGCGC 2 cut(s) 20, 73
PciI ACATGT 1 cut(s) 1330
PciSI GCTCTTC 2 cut(s) 1700, 1959
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 2033
PdiI GCCGGC 1 cut(s) 39
PdmI GAANNNNTTC 2 cut(s) 708, 771
PfeI GAWTC 6 cut(s) 209, 1016, 1679, 1694, 2318, 2383
PflMI CCANNNNNTGG 1 cut(s) 2006
PleI GAGTC 4 cut(s) 52, 1612, 1900, 2281
PmaCI CACGTG 1 cut(s) 1022
PmlI CACGTG 1 cut(s) 1022
PpsI GAGTC 4 cut(s) 52, 1612, 1900, 2281
Ppu21I YACGTR 1 cut(s) 1022
PscI ACATGT 1 cut(s) 1330
PshBI ATTAAT 1 cut(s) 1611
Psp124BI GAGCTC 3 cut(s) 394, 2176, 2561
Psp6I CCWGG 4 cut(s) 584, 1246, 1288, 1873
PspCI CACGTG 1 cut(s) 1022
PspFI CCCAGC 2 cut(s) 672, 2483
PspGI CCWGG 4 cut(s) 584, 1246, 1288, 1873
PspN4I GGNNCC 6 cut(s) 183, 1114, 1115, 1296, 1320, 1395
PspOMI GGGCCC 1 cut(s) 1113
PspPI GGNCC 8 cut(s) 182, 310, 588, 598, 1113, 1114, 1208, 2468
PstI CTGCAG 2 cut(s) 369, 2227
PstNI CAGNNNCTG 1 cut(s) 662
PsuI RGATCY 1 cut(s) 407
PteI GCGCGC 2 cut(s) 20, 73
PvuII CAGCTG 2 cut(s) 2003, 2161
RruI TCGCGA 1 cut(s) 1545
RsaI GTAC 4 cut(s) 957, 1879, 2499, 2630
RsaNI GTAC 4 cut(s) 956, 1878, 2498, 2629
RseI CAYNNNNRTG 4 cut(s) 147, 462, 1917, 2073
SacI GAGCTC 3 cut(s) 394, 2176, 2561
SapI GCTCTTC 2 cut(s) 1700, 1959
SaqAI TTAA 8 cut(s) 780, 1500, 1611, 1685, 1778, 2297, 2393, 2505
Sau96I GGNCC 8 cut(s) 182, 310, 588, 598, 1113, 1114, 1208, 2468
SchI GAGTC 4 cut(s) 52, 1613, 1901, 2281
ScrFI CCNGG 4 cut(s) 586, 1248, 1290, 1875
SduI GDGCHC 6 cut(s) 394, 673, 1117, 2176, 2524, 2561
SfcI CTRYAG 3 cut(s) 365, 2193, 2223
SgsI GGCGCGCC 1 cut(s) 73
SinI GGWCC 3 cut(s) 182, 310, 1208
SmiMI CAYNNNNRTG 4 cut(s) 147, 462, 1917, 2073
SmlI CTYRAG 5 cut(s) 762, 971, 1601, 1700, 2175
SmoI CTYRAG 5 cut(s) 762, 971, 1601, 1700, 2175
SphI GCATGC 2 cut(s) 461, 560
SspMI CTAG 4 cut(s) 1194, 1958, 2102, 2632
SstI GAGCTC 3 cut(s) 394, 2176, 2561
StyD4I CCNGG 4 cut(s) 584, 1246, 1288, 1873
StyI CCWWGG 2 cut(s) 1719, 2454
TaaI ACNGT 5 cut(s) 314, 921, 955, 1162, 1377
TaiI ACGT 4 cut(s) 1024, 1097, 1143, 2436
TaqI TCGA 5 cut(s) 32, 287, 1752, 2027, 2429
TatI WGTACW 2 cut(s) 2497, 2628
TauI GCSGC 5 cut(s) 17, 20, 334, 584, 2201
TfiI GAWTC 6 cut(s) 209, 1016, 1679, 1694, 2318, 2383
Tru1I TTAA 8 cut(s) 780, 1500, 1611, 1685, 1778, 2297, 2393, 2505
Tru9I TTAA 8 cut(s) 780, 1500, 1611, 1685, 1778, 2297, 2393, 2505
TscAI CASTG 6 cut(s) 74, 192, 1382, 1717, 2075, 2283
TseFI GTSAC 4 cut(s) 314, 647, 1255, 2602
Tsp45I GTSAC 4 cut(s) 314, 647, 1255, 2602
TspGWI ACGGA 1 cut(s) 1782
TspRI CASTG 6 cut(s) 74, 192, 1382, 1717, 2075, 2283
Van91I CCANNNNNTGG 1 cut(s) 2006
VpaK11BI GGWCC 3 cut(s) 182, 310, 1208
VspI ATTAAT 1 cut(s) 1611
XagI CCTNNNNNAGG 1 cut(s) 1878
XapI RAATTY 7 cut(s) 1030, 1129, 1339, 1539, 1795, 2439, 2563
XbaI TCTAGA 1 cut(s) 1957
XceI RCATGY 3 cut(s) 461, 560, 1334
XcmI CCANNNNNNNNNTGG 1 cut(s) 517
XmiI GTMKAC 1 cut(s) 276
XmnI GAANNNNTTC 2 cut(s) 708, 771
XspI CTAG 4 cut(s) 1194, 1958, 2102, 2632
Zsp2I ATGCAT 4 cut(s) 951, 1051, 1171, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.