Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0002123

Physical Location & Seq

Genomic Coordinates Reverse (-)

68103625 .. 68127303

Gene Structure 23679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G041150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGATGCAAGCTCAGACGCGCAAGCAGTGGCGCGCCGTCTCGGAGCATCATTCGGCTCGGAACATCGGCGATGAGGAGCTGGAGCGATCAAAGTTAGGCCATTCTGATGAGAGAACAGTATATGAGCAGGGAAGAGAGCCAGTTGATGTTGACTTTTGTTCGATCTCCATAGATGGGACTTTGGACCATGACCTCTTGCAGCAGCGGCTTCACGATATTGTCAGGCAAAGAGAGGAACTGCAGCATATGGAGACTGAGCTTAGAGCTCAAATGATTGCAAGATCTGAGATAATGGATATACAAAATAACTTTGATGCCCAACTGAAGGAGCATGCTAATGCTGCTTCCAAGCTTCAGGAGCAACTCCATGAAAAGGAGCAGGCCATACATGATTTGGAGAGGGAATTGGAAGAAAAAGATAGAGAGCTGCATGCTACCAAGTTAGATAATGAAGCGGTATGCTGGGCCAAAGAGGGCCTTCTTAGAGAACAGAACAAAGAATTAGCAACTTTCAGAAGAGAGCGTGACCATTCAGAAGCTGAAAGAGCCCAGCATATACAGCAATTACATGATCTTCAAGAACATATTCAAAAAAAGAGAGGCAACTTATTGAGTTGCAGGAACAGGTTTCCATCATATTTTCGGCATAGGCTTGCTCAAGAAGCCATTCTATTTAAGGATGAACAACTGAGCGAAGCACAAGCTTGGATCGCCCGTGTTCAAGAAATGGATGCTTTGCAGTCAACTACACTTCAAAATCAGTTGCGGGAACATTCAGAACACTATAATCAGCTCTGGCTTGTTTGTCAAAGACAGTTTGCTGAAATGGAGAGACATCATATGCATACGGTACAACAGCTTCAGCTTGAGTTAGCTGATGCTAGACAAAGAAGTGGAACGTACACTGATGAATCACGTGCAGCAAATTCAACTTCAAAGGATGCATCTCAGTTTGGTCGGAACAATGGGAACCAGATTGATATAAATACGTCAAATGGAAATCCAGGTGCCCTCCCAAATGGGAATTCACAGGTCGTTTCATCGTTTTCTTCAACTGTTGACCATGTTCCTAGTGTTCCAATTGGTCCTTCGTCTCTACTTGGGATGCCTCCCTTTCTTCCACCTGGACAGGTGACTGGTATGCATCCATTTGTTCTGCATCAACCTGGGGTTCCCCATTCCATGCCACCACAGGTTCCTCAATCACATGTGGGGAATTTTCACTCAATACCTGCAATGTCATCTCTCCAACAGTGGCAGAACCAACAGGTTCTTGAGTCAATTAATAGCAGTTACTTGGTCTCACCCCAAACTGATCAGAGCTTGCAACAAATGTCTTCCCAATTTACTGATTCTTTAAGATTGGATTCTCTTGAGAAGAGCAGTGAAACCAAGAATGTTCAGACCTTGATCGATCATGGGTTGGACGGACAAGTTTTAACGGCTGAGAAACCAAATTCTGCTACCAAGTCCTCAAAATCTGACACTCCAATCCATTCAGTCAATCTCAATGAAATTACAATAAACAATTCCCCTGGTACAGGTTTGCCTGAGTCCTTTGTCTCAACTGGACACACCAATGCACCATCAGTGGGTAGGACTTCGGAGACCGCTCTTCTAGATGAAAGGTCATTGTTGGCTTGTATGGTTCGGACAATACCAGCTGGTGGTAGAATTAGGATCAGTTCGACGCTGCCAAATAGGCTCAGGAAGATGCTTGCACCTTTACACTGGCATGATTACAAGAAAAAGTATGGAAAGCTAGATGATTTCGTTGCTGCTCATACTGAACTATTTGTGATTGAGGGGGACTATATTCAGCTGCGTGAAGGAGCTCAAGAGATGATAGCAGCTACAGCCGCTGTTGCCAGAGTTGCTGCTGCTGCAGCAGCATCATCCCCCTACTCTTCATGTTTGCCTTCTGTGGCTGTTACTCCAGTGGCACAGACTCACCGCTTAAAGAAGATATCATCTCTTGATTCCAAAAATGTGGTTACTTCTACTCCAAATGCAAATAATGCTCACTTGCAGTCTGTGAAGCAGAATCAGCAATTAAATGGTGTCTCTTTTGGTGTTTCGGGAGGTATGTCGAACGTAAAAATTTTGAGCAAATCCAAGGACATGAATGGGCCTGAACCTACTCCCAGCCAGTCATCTGTACTTCTTAATGGTGGAAATGGAGCTCCTCTGGACAGATCAATGGCCAATGGCCGGCATTTTGTTGGGAAACAGCATGGCAGGATGACTAATTCTGCATTTACCTCCAGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

757

Amino Acids

84.39

Weight (kDa)

6.42

Isoelectric Point (pI)

53.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7725	PF24851	539 - 609	2.3e-38	Domain of unknown function (DUF7725)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002123)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53620 AT5G53620 AT5G53620
fragaria_vesca	FvH4_7g32660 FvH4_7g32660 FvH4_7g32660 FvH4_7g32660
malus_domestica	MD01G1227300.v1.1 MD07G1297600.v1.1
prunus_persica	Prupe.2G317300_v2.0.a1 Prupe.2G317300_v2.0.a1 Prupe.2G317300_v2.0.a1 Prupe.2G317300_v2.0.a1 Prupe.2G317300_v2.0.a1
pyrus_communis	pycom01g23540 pycom07g27000
rosa_chinensis	RchiOBHm_Chr1g0382521 RchiOBHm_Chr1g0382561 RchiOBHm_Chr1g0382611 RchiOBHm_Chr1g0382631 RchiOBHm_Chr1g0382641
rosa_laevigata	RLG00000026170
rosa_multiflora	Rmu_co8064912.1_g000001 Rmu_sc0000110.1_g000056 Rmu_sc0006862.1_g000005 Rmu_sc0006862.1_g000008 Rmu_sc0006862.1_g000011 Rmu_sc0017237.1_g000002 Rmu_sc0017237.1_g000006
rosa_roxburghii	Rroxscaffold_1G00051710 Rroxscaffold_4G00277980 Rroxscaffold_4G00277990
rosa_rugosa	Rorug01G0435100 Rorug01G0435200 Rorug01G0435300 Rorug01G0435300
rosa_samantha	Rh1AG460200 Rh1BG416400 Rh1BG416500 Rh1BG416800 Rh1CG430200 Rh1DG448800 Rh1DG449000
rosa_wichuraiana	Rw1G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1240
AccB1I	GGYRCC	1 cut(s)	1007
AccB7I	CCANNNNNTGG	1 cut(s)	1667
AccBSI	CCGCTC	1 cut(s)	1613
AccII	CGCG	2 cut(s)	19, 33
AciI	CCGC	6 cut(s)	205, 455, 766, 1611, 1860, 1954
AclWI	GGATC	2 cut(s)	716, 1688
AcoI	YGGCCR	2 cut(s)	2202, 2209
AcsI	RAATTY	5 cut(s)	925, 1024, 1216, 1456, 2100
AcuI	CTGAAG	3 cut(s)	338, 344, 845
AcvI	CACGTG	1 cut(s)	917
AfaI	GTAC	4 cut(s)	852, 902, 1540, 2160
AfiI	CCNNNNNNNGG	7 cut(s)	174, 325, 373, 1541, 1592, 1667, 2211
AflIII	ACRYGT	1 cut(s)	1207
AgsI	TTSAA	7 cut(s)	578, 590, 722, 755, 930, 936, 1053
AjnI	CCWGG	4 cut(s)	1003, 1123, 1165, 1534
AjuI	GAANNNNNNNTTGG	4 cut(s)	1009, 1041, 1072, 1104
Alw21I	GWGCWC	3 cut(s)	268, 1837, 2185
Alw26I	GTCTC	8 cut(s)	43, 245, 826, 1098, 1306, 1567, 1601, 2068
AlwI	GGATC	2 cut(s)	716, 1688
AlwNI	CAGNNNCTG	2 cut(s)	539, 1862
AoxI	GGCC	7 cut(s)	97, 381, 465, 475, 2129, 2202, 2209
ApoI	RAATTY	5 cut(s)	925, 1024, 1216, 1456, 2100
AscI	GGCGCGCC	1 cut(s)	31
AseI	ATTAAT	1 cut(s)	1284
Asp700I	GAANNNNTTC	2 cut(s)	585, 666
AspLEI	GCGC	3 cut(s)	21, 33, 35
AspS9I	GGNCC	5 cut(s)	184, 465, 475, 1085, 2129
AsuHPI	GGTGA	3 cut(s)	1144, 1296, 1943
AvaII	GGWCC	2 cut(s)	184, 1085
BaeGI	GKGCMC	1 cut(s)	1012
BalI	TGGCCA	1 cut(s)	2204
BanI	GGYRCC	1 cut(s)	1007
BanII	GRGCYC	4 cut(s)	268, 550, 1837, 2185
BarI	GAAGNNNNNNTAC	2 cut(s)	843, 875
BbrPI	CACGTG	1 cut(s)	917
BbsI	GAAGAC	1 cut(s)	1329
Bbv12I	GWGCWC	3 cut(s)	268, 1837, 2185
BccI	CCATC	3 cut(s)	167, 640, 1594
BceAI	ACGGC	2 cut(s)	20, 1458
BciT130I	CCWGG	4 cut(s)	1005, 1125, 1167, 1536
BclI	TGATCA	1 cut(s)	1315
BcoDI	GTCTC	8 cut(s)	43, 245, 826, 1098, 1306, 1567, 1601, 2068
BfaI	CTAG	4 cut(s)	882, 1071, 1619, 1763
BfmI	CTRYAG	3 cut(s)	239, 1854, 1884
BfuAI	ACCTGC	1 cut(s)	1240
BglI	GCCNNNNNGGC	1 cut(s)	1702
BglII	AGATCT	1 cut(s)	281
Bme1390I	CCNGG	4 cut(s)	1005, 1125, 1167, 1536
Bme18I	GGWCC	2 cut(s)	184, 1085
BmgT120I	GGNCC	5 cut(s)	184, 465, 475, 1085, 2129
BmiI	GGNNCC	4 cut(s)	971, 1009, 1173, 1197
BmrFI	CCNGG	4 cut(s)	1005, 1125, 1167, 1536
BpiI	GAAGAC	1 cut(s)	1329
BpmI	CTGGAG	3 cut(s)	101, 1920, 2248
Bpu10I	CCTNAGC	1 cut(s)	1706
BpuEI	CTTGAG	5 cut(s)	642, 887, 1295, 1394, 1821
Bsa29I	ATCGAT	1 cut(s)	1413
BsaAI	YACGTR	1 cut(s)	917
BsaI	GGTCTC	2 cut(s)	1306, 1601
BsaJI	CCNNGG	3 cut(s)	1166, 1534, 2115
BsaXI	ACNNNNNCTCC	2 cut(s)	1987, 2017
Bsc4I	CCNNNNNNNGG	7 cut(s)	174, 325, 373, 1541, 1592, 1667, 2211
Bse118I	RCCGGY	1 cut(s)	2211
Bse1I	ACTGG	6 cut(s)	140, 1141, 1573, 1736, 1937, 2149
Bse3DI	GCAATG	1 cut(s)	1242
BseBI	CCWGG	4 cut(s)	1005, 1125, 1167, 1536
BseCI	ATCGAT	1 cut(s)	1413
BseDI	CCNNGG	3 cut(s)	1166, 1534, 2115
BseGI	GGATG	7 cut(s)	685, 736, 946, 1110, 1144, 1895, 2247
BseLI	CCNNNNNNNGG	7 cut(s)	174, 325, 373, 1541, 1592, 1667, 2211
BseMI	GCAATG	1 cut(s)	1242
BseMII	CTCAG	8 cut(s)	26, 246, 276, 680, 962, 1437, 1542, 1720
BseNI	ACTGG	6 cut(s)	140, 1141, 1573, 1736, 1937, 2149
BsePI	GCGCGC	1 cut(s)	31
BseRI	GAGGAG	2 cut(s)	89, 2175
BseSI	GKGCMC	1 cut(s)	1012
BseYI	CCCAGC	3 cut(s)	462, 549, 2144
BsgI	GTGCAG	1 cut(s)	939
Bsh1236I	CGCG	2 cut(s)	19, 33
BshFI	GGCC	7 cut(s)	99, 383, 467, 477, 2131, 2204, 2211
BshNI	GGYRCC	1 cut(s)	1007
BshVI	ATCGAT	1 cut(s)	1413
BsiHKAI	GWGCWC	3 cut(s)	268, 1837, 2185
BsiSI	CCGG	1 cut(s)	2212
BslFI	GGGAC	2 cut(s)	190, 1823
BslI	CCNNNNNNNGG	7 cut(s)	174, 325, 373, 1541, 1592, 1667, 2211
BsmAI	GTCTC	8 cut(s)	43, 245, 826, 1098, 1306, 1567, 1601, 2068
BsmBI	CGTCTC	2 cut(s)	43, 1098
BsmFI	GGGAC	2 cut(s)	190, 1823
BsnI	GGCC	7 cut(s)	99, 383, 467, 477, 2131, 2204, 2211
Bso31I	GGTCTC	2 cut(s)	1306, 1601
Bsp1286I	GDGCHC	5 cut(s)	268, 550, 1012, 1837, 2185
BspACI	CCGC	6 cut(s)	205, 455, 766, 1611, 1860, 1954
BspANI	GGCC	7 cut(s)	99, 383, 467, 477, 2131, 2204, 2211
BspCNI	CTCAG	8 cut(s)	25, 247, 277, 681, 961, 1438, 1543, 1719
BspDI	ATCGAT	1 cut(s)	1413
BspFNI	CGCG	2 cut(s)	19, 33
BspLI	GGNNCC	4 cut(s)	971, 1009, 1173, 1197
BspMAI	CTGCAG	2 cut(s)	243, 1888
BspMI	ACCTGC	1 cut(s)	1240
BspPI	GGATC	2 cut(s)	716, 1688
BspQI	GCTCTTC	2 cut(s)	1373, 1620
BspT107I	GGYRCC	1 cut(s)	1007
BspTNI	GGTCTC	2 cut(s)	1306, 1601
BsrBI	CCGCTC	1 cut(s)	1613
BsrDI	GCAATG	1 cut(s)	1242
BsrFI	RCCGGY	1 cut(s)	2211
BsrI	ACTGG	6 cut(s)	140, 1141, 1573, 1736, 1937, 2149
BssAI	RCCGGY	1 cut(s)	2211
BssECI	CCNNGG	3 cut(s)	1166, 1534, 2115
BssHII	GCGCGC	1 cut(s)	31
BssT1I	CCWWGG	1 cut(s)	2115
Bst2UI	CCWGG	4 cut(s)	1005, 1125, 1167, 1536
Bst4CI	ACNGT	5 cut(s)	118, 816, 850, 1057, 1254
Bst6I	CTCTTC	5 cut(s)	127, 511, 1373, 1620, 1912
BstAPI	GCANNNNNTGC	1 cut(s)	2018
BstBAI	YACGTR	1 cut(s)	917
BstENI	CCTNNNNNAGG	1 cut(s)	1539
BstF5I	GGATG	7 cut(s)	685, 736, 946, 1110, 1144, 1895, 2247
BstFNI	CGCG	2 cut(s)	19, 33
BstHHI	GCGC	3 cut(s)	21, 33, 35
BstMAI	GTCTC	8 cut(s)	43, 245, 826, 1098, 1306, 1567, 1601, 2068
BstNI	CCWGG	4 cut(s)	1005, 1125, 1167, 1536
BstNSI	RCATGY	3 cut(s)	335, 434, 1211
BstSCI	CCNGG	4 cut(s)	1003, 1123, 1165, 1534
BstSFI	CTRYAG	3 cut(s)	239, 1854, 1884
BstSLI	GKGCMC	1 cut(s)	1012
BstUI	CGCG	2 cut(s)	19, 33
BstV2I	GAAGAC	1 cut(s)	1329
BstX2I	RGATCY	1 cut(s)	281
BstXI	CCANNNNNNTGG	1 cut(s)	1990
BstYI	RGATCY	1 cut(s)	281
Bsu15I	ATCGAT	1 cut(s)	1413
BsuRI	GGCC	7 cut(s)	99, 383, 467, 477, 2131, 2204, 2211
BsuTUI	ATCGAT	1 cut(s)	1413
BtgZI	GCGATG	1 cut(s)	84
BtsCI	GGATG	7 cut(s)	685, 736, 946, 1110, 1144, 1895, 2247
BtsI	GCAGTG	2 cut(s)	32, 1390
BtsIMutI	CAGTG	7 cut(s)	32, 903, 1259, 1390, 1596, 1729, 1944
BveI	ACCTGC	1 cut(s)	1240
CaiI	CAGNNNCTG	2 cut(s)	539, 1862
CfoI	GCGC	3 cut(s)	21, 33, 35
Cfr10I	RCCGGY	1 cut(s)	2211
Cfr13I	GGNCC	5 cut(s)	184, 465, 475, 1085, 2129
ClaI	ATCGAT	1 cut(s)	1413
CseI	GACGC	2 cut(s)	25, 1699
Csp6I	GTAC	4 cut(s)	851, 901, 1539, 2159
CviQI	GTAC	4 cut(s)	851, 901, 1539, 2159
EaeI	YGGCCR	2 cut(s)	2202, 2209
Eam1104I	CTCTTC	5 cut(s)	127, 511, 1373, 1620, 1912
EarI	CTCTTC	5 cut(s)	127, 511, 1373, 1620, 1912
Ecl136II	GAGCTC	3 cut(s)	266, 1835, 2183
Eco130I	CCWWGG	1 cut(s)	2115
Eco24I	GRGCYC	4 cut(s)	268, 550, 1837, 2185
Eco31I	GGTCTC	2 cut(s)	1306, 1601
Eco32I	GATATC	1 cut(s)	1968
Eco47I	GGWCC	2 cut(s)	184, 1085
Eco53kI	GAGCTC	3 cut(s)	266, 1835, 2183
Eco57I	CTGAAG	3 cut(s)	338, 344, 845
Eco72I	CACGTG	1 cut(s)	917
EcoICRI	GAGCTC	3 cut(s)	266, 1835, 2183
EcoNI	CCTNNNNNAGG	1 cut(s)	1539
EcoO109I	RGGNCCY	1 cut(s)	475
EcoRI	GAATTC	1 cut(s)	1024
EcoRII	CCWGG	4 cut(s)	1003, 1123, 1165, 1534
EcoRV	GATATC	1 cut(s)	1968
EcoT14I	CCWWGG	1 cut(s)	2115
EcoT22I	ATGCAT	3 cut(s)	846, 946, 1146
EcoT38I	GRGCYC	4 cut(s)	268, 550, 1837, 2185
ErhI	CCWWGG	1 cut(s)	2115
Esp3I	CGTCTC	2 cut(s)	43, 1098
FalI	AAGNNNNNCTT	2 cut(s)	462, 494
FaqI	GGGAC	2 cut(s)	190, 1823
FauI	CCCGC	1 cut(s)	759
FauNDI	CATATG	2 cut(s)	246, 840
FbaI	TGATCA	1 cut(s)	1315
FokI	GGATG	7 cut(s)	692, 743, 953, 1117, 1131, 1882, 2254
FriOI	GRGCYC	4 cut(s)	268, 550, 1837, 2185
FspBI	CTAG	4 cut(s)	882, 1071, 1619, 1763
GlaI	GCGC	3 cut(s)	20, 32, 34
GsaI	CCCAGC	3 cut(s)	466, 553, 2148
GsuI	CTGGAG	3 cut(s)	101, 1920, 2248
HaeIII	GGCC	7 cut(s)	99, 383, 467, 477, 2131, 2204, 2211
HapII	CCGG	1 cut(s)	2212
HgaI	GACGC	2 cut(s)	25, 1699
HhaI	GCGC	3 cut(s)	21, 33, 35
Hin6I	GCGC	3 cut(s)	19, 31, 33
HinP1I	GCGC	3 cut(s)	19, 31, 33
HincII	GTYRAC	3 cut(s)	151, 744, 1060
HindII	GTYRAC	3 cut(s)	151, 744, 1060
HindIII	AAGCTT	2 cut(s)	350, 702
HinfI	GANTC	8 cut(s)	911, 1277, 1352, 1367, 1553, 1948, 1979, 2044
HpaII	CCGG	1 cut(s)	2212
HphI	GGTGA	3 cut(s)	1144, 1296, 1943
Hpy166II	GTNNAC	4 cut(s)	151, 744, 903, 1060
Hpy8I	GTNNAC	4 cut(s)	151, 744, 903, 1060
Hpy99I	CGWCG	1 cut(s)	1693
HpyAV	CCTTC	5 cut(s)	319, 488, 1098, 1823, 1929
HpyCH4III	ACNGT	5 cut(s)	118, 816, 850, 1057, 1254
HpyCH4IV	ACGT	4 cut(s)	899, 916, 989, 2094
HpySE526I	ACGT	4 cut(s)	899, 916, 989, 2094
HspAI	GCGC	3 cut(s)	19, 31, 33
KroI	GCCGGC	1 cut(s)	2211
KroNI	GCCGGC	1 cut(s)	2213
Ksp22I	TGATCA	1 cut(s)	1315
LguI	GCTCTTC	2 cut(s)	1373, 1620
LmnI	GCTCC	9 cut(s)	43, 76, 82, 328, 358, 376, 1832, 2180, 2188
MaeI	CTAG	4 cut(s)	882, 1071, 1619, 1763
MaeII	ACGT	4 cut(s)	899, 916, 989, 2094
MaeIII	GTNAC	5 cut(s)	524, 1132, 1292, 1930, 1993
MbiI	CCGCTC	1 cut(s)	1613
MfeI	CAATTG	1 cut(s)	1080
MflI	RGATCY	1 cut(s)	281
MhlI	GDGCHC	5 cut(s)	268, 550, 1012, 1837, 2185
MlsI	TGGCCA	1 cut(s)	2204
MluNI	TGGCCA	1 cut(s)	2204
MlyI	GAGTC	3 cut(s)	1286, 1562, 1942
MmeI	TCCRAC	3 cut(s)	938, 1273, 1404
Mox20I	TGGCCA	1 cut(s)	2204
Mph1103I	ATGCAT	3 cut(s)	846, 946, 1146
MroNI	GCCGGC	1 cut(s)	2211
MroXI	GAANNNNTTC	2 cut(s)	585, 666
MscI	TGGCCA	1 cut(s)	2204
MseI	TTAA	7 cut(s)	675, 1284, 1358, 1439, 1958, 2054, 2166
MslI	CAYNNNNRTG	4 cut(s)	105, 336, 1578, 1734
Msp20I	TGGCCA	1 cut(s)	2204
MspA1I	CMGCKG	4 cut(s)	205, 1664, 1822, 1862
MspI	CCGG	1 cut(s)	2212
MspR9I	CCNGG	4 cut(s)	1005, 1125, 1167, 1536
MunI	CAATTG	1 cut(s)	1080
MvaI	CCWGG	4 cut(s)	1005, 1125, 1167, 1536
MvnI	CGCG	2 cut(s)	19, 33
NaeI	GCCGGC	1 cut(s)	2213
NdeI	CATATG	2 cut(s)	246, 840
NgoMIV	GCCGGC	1 cut(s)	2211
NlaIV	GGNNCC	4 cut(s)	971, 1009, 1173, 1197
NmuCI	GTSAC	2 cut(s)	524, 1132
NsiI	ATGCAT	3 cut(s)	846, 946, 1146
NspI	RCATGY	3 cut(s)	335, 434, 1211
PaeI	GCATGC	2 cut(s)	335, 434
PalAI	GGCGCGCC	1 cut(s)	31
PauI	GCGCGC	1 cut(s)	31
PciI	ACATGT	1 cut(s)	1207
PciSI	GCTCTTC	2 cut(s)	1373, 1620
PdiI	GCCGGC	1 cut(s)	2213
PdmI	GAANNNNTTC	2 cut(s)	585, 666
PfeI	GAWTC	5 cut(s)	911, 1352, 1367, 1979, 2044
PflMI	CCANNNNNTGG	1 cut(s)	1667
PleI	GAGTC	3 cut(s)	1285, 1561, 1942
PmaCI	CACGTG	1 cut(s)	917
PmlI	CACGTG	1 cut(s)	917
PpsI	GAGTC	3 cut(s)	1285, 1561, 1942
Ppu21I	YACGTR	1 cut(s)	917
PscI	ACATGT	1 cut(s)	1207
PshBI	ATTAAT	1 cut(s)	1284
Psp124BI	GAGCTC	3 cut(s)	268, 1837, 2185
Psp6I	CCWGG	4 cut(s)	1003, 1123, 1165, 1534
PspCI	CACGTG	1 cut(s)	917
PspFI	CCCAGC	3 cut(s)	462, 549, 2144
PspGI	CCWGG	4 cut(s)	1003, 1123, 1165, 1534
PspN4I	GGNNCC	4 cut(s)	971, 1009, 1173, 1197
PspPI	GGNCC	5 cut(s)	184, 465, 475, 1085, 2129
PstI	CTGCAG	2 cut(s)	243, 1888
PstNI	CAGNNNCTG	2 cut(s)	539, 1862
PsuI	RGATCY	1 cut(s)	281
PteI	GCGCGC	1 cut(s)	31
PvuII	CAGCTG	2 cut(s)	1664, 1822
RsaI	GTAC	4 cut(s)	852, 902, 1540, 2160
RsaNI	GTAC	4 cut(s)	851, 901, 1539, 2159
RseI	CAYNNNNRTG	4 cut(s)	105, 336, 1578, 1734
SacI	GAGCTC	3 cut(s)	268, 1837, 2185
SapI	GCTCTTC	2 cut(s)	1373, 1620
SaqAI	TTAA	7 cut(s)	675, 1284, 1358, 1439, 1958, 2054, 2166
Sau96I	GGNCC	5 cut(s)	184, 465, 475, 1085, 2129
SchI	GAGTC	3 cut(s)	1286, 1562, 1942
ScrFI	CCNGG	4 cut(s)	1005, 1125, 1167, 1536
SduI	GDGCHC	5 cut(s)	268, 550, 1012, 1837, 2185
SfcI	CTRYAG	3 cut(s)	239, 1854, 1884
SgsI	GGCGCGCC	1 cut(s)	31
SinI	GGWCC	2 cut(s)	184, 1085
SmiMI	CAYNNNNRTG	4 cut(s)	105, 336, 1578, 1734
SmlI	CTYRAG	5 cut(s)	657, 866, 1274, 1373, 1836
SmoI	CTYRAG	5 cut(s)	657, 866, 1274, 1373, 1836
SphI	GCATGC	2 cut(s)	335, 434
SsiI	CCGC	6 cut(s)	205, 455, 766, 1611, 1860, 1954
SspMI	CTAG	4 cut(s)	882, 1071, 1619, 1763
SstI	GAGCTC	3 cut(s)	268, 1837, 2185
StyD4I	CCNGG	4 cut(s)	1003, 1123, 1165, 1534
StyI	CCWWGG	1 cut(s)	2115
TaaI	ACNGT	5 cut(s)	118, 816, 850, 1057, 1254
TaiI	ACGT	4 cut(s)	902, 919, 992, 2097
TaqI	TCGA	4 cut(s)	161, 1413, 1688, 2090
TatI	WGTACW	1 cut(s)	2158
TauI	GCSGC	2 cut(s)	208, 1862
TfiI	GAWTC	5 cut(s)	911, 1352, 1367, 1979, 2044
Tru1I	TTAA	7 cut(s)	675, 1284, 1358, 1439, 1958, 2054, 2166
Tru9I	TTAA	7 cut(s)	675, 1284, 1358, 1439, 1958, 2054, 2166
TscAI	CASTG	7 cut(s)	32, 910, 1259, 1390, 1596, 1736, 1944
TseFI	GTSAC	2 cut(s)	524, 1132
Tsp45I	GTSAC	2 cut(s)	524, 1132
TspDTI	ATGAA	9 cut(s)	384, 465, 696, 924, 1029, 1527, 1638, 1899, 2138
TspGWI	ACGGA	1 cut(s)	1443
TspRI	CASTG	7 cut(s)	32, 910, 1259, 1390, 1596, 1736, 1944
Van91I	CCANNNNNTGG	1 cut(s)	1667
VpaK11BI	GGWCC	2 cut(s)	184, 1085
VspI	ATTAAT	1 cut(s)	1284
XagI	CCTNNNNNAGG	1 cut(s)	1539
XapI	RAATTY	5 cut(s)	925, 1024, 1216, 1456, 2100
XbaI	TCTAGA	1 cut(s)	1618
XceI	RCATGY	3 cut(s)	335, 434, 1211
XcmI	CCANNNNNNNNNTGG	1 cut(s)	391
XmnI	GAANNNNTTC	2 cut(s)	585, 666
XspI	CTAG	4 cut(s)	882, 1071, 1619, 1763
Zsp2I	ATGCAT	3 cut(s)	846, 946, 1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.