MD01G1227300.v1.1

isoform X1

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
31712314 .. 31719010
6697 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1227300.v1.1.491

Sequence Viewer

Length: 2643 bp
ATGGAGGCTGCGGCCGCTGCGCGCGGTAGTTCGATGCCGATGCCACCTCCGCCATCCCGTAAAGAGTGGCGCGTCGTCTCGGACCATCATTCGGCTCGAAACATCGGGGATGAGGAGTTGGAACGATCAAAGCTAGGCCAATCAGATGAGAGAACTATATATGAGCAAGGGAGAGGGCCAGTTGATGTGGACTTCTGTTCGATCACAGTAGATGGGACTTTAGATCATGGCCTTCTGCAGCAGCGGATTGAAGACGTTTCTAGACAAAGAGAGGCACTACAGCATATGGAGATTGATCTTAAAGCTCAAATCATTGCAAGATCCGAGATAATGGAAATACAACATAACTTTGATGCTAAAATAAAGGAACATGCCAATGCTGCTTCCAAGCTTCAGGAGCAACTCCATGAAAGGGAGCAGACCATACATGATTTGGAAAGGAAAATGGACGAGAAGGATAGAGAGCTGCATGCTATCAAACTAGATAATGAAGCAGCCTGGGCTAAAGAAGACCTTCTTAGAGAACAGAACAAAGAATTAGCAAATATCAGAAGGGAACGTGACCATTCGGAAGCTGAAAGAACCCAGCACATACAACAACTACATGACCTGCAAGAGCATATTCAAGAAAAAGAGAGGCAGCTTAATGATCTGCGGGAACAGCATAGGCTTGCTCAAGAAGCCATCCTTTTTAAGGATGAACAGTTGAGGGAGGCCCAAGCTTGGATCACCCGTGTTCAGGAAATGGATGCCTTGCAGTCAACTACAATCCAAGCTGAATTGCGGGAACGTACAGAACAATATAATCAACTCTGGCTTGGTTGCCAAAGACAGTTTGCTGAGATGGAGAGACTTCATATGCATACAGTACAACAGCTACAACTTGAGCTGGCTGATGCAAGAGAAAGGAGTGGAGCTTACACTGATGAGTCACGCATGACACAATCAAATTCAAAGGATGCATCTCAATTTGGTCAGAACAACGGAAACCAGCTAGATATGAATACATCAAATGGAAATACAGGGCCCCTCCAAAATGGGAATTCGGATGATGTTTCATCATTTGCTTCAACTGGAAACGCATCAACTCAGATCGACCATGTTGCTGGGGTTTCAATTTCACCATCATCACTACTTGGGATGCCTTCCTATCTTCCCCCTGGACAAGTGACTGCTCTACATCCATTTCTTATGCATCAACAAGGGGTGCCCCATTCTGTCCCACCACATGTTCCTCAATCTCATGTTGGTCATTTTCACTCGATACCTGCAATATCATCTCTCCAACAGTGGCAAAACCAACAGGCTCCATCTGAGGGTTTGCAGATATCTACACAGAATGAGCTTCCATCATCACAAAATGATCCAAACTTAATAAGACCAGATGCAAATTATAACTATGAAACATCTGGTAATGGGCAATTTCTTCAACAAGACTATTTGGATGCTCAAATTAACCAAGGGGCACAGCCTGATTCTGTCTTGTCATCATCTACTGGGGAAGCACAGGTTCTTGAGTCAATTGATAGAGGTTATTTGGTCTCATCCCAACCTGATCAGAGCTTGCAACAAATTTCCTCCCAGTTCCGCAATGCTTTAAGATTGGAGTCTCTTGAACAGAACAGTGAAACCAAGGTACCGGAGCAAAATGTTCAGACCTCGACTGACCATGGGTTGGATGGACAAGTTTTAACTGCAGAACAACCAATTTCTACTACCAATTCGTTAAAATCTGATAATTCAATTCCTTCAGTCAATATCAAGGAAACTGCAATTGATAATGCCACTAGTGCAGTTCTGCCTGAAGCATTTGTCTCAACTGGGCATGCAAATGCGGCAGGGGGACAGACTTCGGAAATTGCACTTCTTGATGAAAGGTCATTGTTGGCTTGCATGGTTCGCACAATTCCGGCAGGTGGTAGAATTCGTATCAGTTCAACGCTACCAAATAGGCTCGGAAAGATGCTTGCACCCTTACACTGGCATGATTACAAGAAAAAGTTCGGAAAGCTTGATGACTTTGTGGCTAGTCACCATGAATTATTTGTGATTGAGGGCGACTACATTCAGCTTCGTGAAGGAGCGCAAGAGATGATAGCAGCTACAGCTGCTGTTGCAAAAGTTGCTGCTGCAGCAGCTGCATCATCTCCCTACTCTTCATCTTTGCCTTCTGTGGCTATTACTCCAGTGGCACAGACTCACCGCTCAAGGAAGATGTCAACTTCAAATGTAAATGATAATCACTTGCAGTCTGTTAAGCAGAATCAGCAATTAAATGGGTTAAGCTTTGGCATTCCTGGAGGTTTCTCAAATGTAAAGATTTTGAGTAAATCTAAGGATTCTTGGGAACCGAATGGCCCTGACACTAGGCCAAGCCAGTCATCTGTACTTATGAATGGTGGAAATGGAGCACTTATGGATAGATCAAGCATGAGCAGTACCCAAAGCTCAGGCTTGCCTAATGGCCGGCTGAGCTCAAATGCTGTTGGGAAACATGGCAGGATGACCAATGCTGCTGCATTTACTTCCAGAAGATACAGGGAATCGCGCCACCTTATGACCGGAATTTGTGGACCAGAGCGTGGACGGAAGATTATTTTGGGACGGCAACAGGATATGCGGGAGATTACATATTCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

881

Amino Acids

97.54

Weight (kDa)

5.69

Isoelectric Point (pI)

52.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7725 PF24851 622 - 692 1.9e-38 Domain of unknown function (DUF7725)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1395
AarI CACCTGC 1 cut(s) 1904
Acc36I ACCTGC 3 cut(s) 618, 1276, 1904
Acc65I GGTACC 1 cut(s) 1636
AccB1I GGYRCC 2 cut(s) 1207, 1636
AccB7I CCANNNNNTGG 2 cut(s) 1675, 2582
AccBSI CCGCTC 1 cut(s) 2205
AccII CGCG 4 cut(s) 22, 24, 72, 2548
AclWI GGATC 3 cut(s) 315, 734, 1358
AcoI YGGCCR 2 cut(s) 12, 2464
AcsI RAATTY 5 cut(s) 949, 1042, 1572, 1923, 2565
AcuI CTGAAG 3 cut(s) 377, 1734, 1824
AfaI GTAC 5 cut(s) 793, 870, 1638, 2388, 2440
AflIII ACRYGT 1 cut(s) 1228
AhlI ACTAGT 1 cut(s) 1787
AjnI CCWGG 3 cut(s) 497, 1159, 2296
AjuI GAANNNNNNNTTGG 2 cut(s) 2582, 2614
Alw21I GWGCWC 2 cut(s) 2413, 2477
Alw26I GTCTC 5 cut(s) 82, 844, 1546, 1614, 1819
AlwI GGATC 3 cut(s) 315, 734, 1358
AlwNI CAGNNNCTG 2 cut(s) 2111, 2138
AoxI GGCC 9 cut(s) 12, 136, 176, 229, 714, 1025, 2356, 2369, 2464
ApaI GGGCCC 1 cut(s) 1029
ApoI RAATTY 5 cut(s) 949, 1042, 1572, 1923, 2565
Asp700I GAANNNNTTC 2 cut(s) 513, 2000
Asp718I GGTACC 1 cut(s) 1636
AspLEI GCGC 5 cut(s) 22, 24, 72, 2086, 2550
AspS9I GGNCC 7 cut(s) 82, 176, 715, 1025, 1026, 2357, 2573
AsuHPI GGTGA 4 cut(s) 721, 1113, 2024, 2192
AvaII GGWCC 2 cut(s) 82, 2573
BaeGI GKGCMC 3 cut(s) 1029, 1212, 1468
BaeI ACNNNNGTAYC 2 cut(s) 1620, 1653
BanI GGYRCC 2 cut(s) 1207, 1636
BanII GRGCYC 2 cut(s) 1029, 2477
BbsI GAAGAC 2 cut(s) 258, 516
Bbv12I GWGCWC 2 cut(s) 2413, 2477
BccI CCATC 9 cut(s) 61, 93, 206, 692, 838, 1132, 1318, 1357, 1673
BceAI ACGGC 1 cut(s) 2621
BcgI CGANNNNNNTGC 4 cut(s) 22, 56, 1085, 1119
BciT130I CCWGG 3 cut(s) 499, 1161, 2298
BclI TGATCA 1 cut(s) 1555
BcoDI GTCTC 5 cut(s) 82, 844, 1546, 1614, 1819
BcuI ACTAGT 1 cut(s) 1787
BfaI CTAG 7 cut(s) 134, 261, 482, 995, 1788, 2028, 2367
BfmI CTRYAG 5 cut(s) 236, 278, 1695, 2103, 2130
BfuAI ACCTGC 3 cut(s) 618, 1276, 1904
BlpI GCTNAGC 1 cut(s) 2471
Bme1390I CCNGG 3 cut(s) 499, 1161, 2298
Bme18I GGWCC 2 cut(s) 82, 2573
BmgT120I GGNCC 7 cut(s) 82, 176, 715, 1025, 1026, 2357, 2573
BmiI GGNNCC 6 cut(s) 1027, 1028, 1209, 1308, 1638, 2349
BmrFI CCNGG 3 cut(s) 499, 1161, 2298
BmrI ACTGGG 3 cut(s) 1506, 1576, 1830
BmuI ACTGGG 3 cut(s) 1506, 1576, 1830
BpiI GAAGAC 2 cut(s) 258, 516
BpmI CTGGAG 2 cut(s) 2169, 2319
Bpu10I CCTNAGC 1 cut(s) 2449
Bpu1102I GCTNAGC 1 cut(s) 2471
BpuEI CTTGAG 4 cut(s) 660, 905, 1535, 2191
BsaI GGTCTC 1 cut(s) 1546
BsaJI CCNNGG 5 cut(s) 498, 1159, 1459, 1632, 1669
BsaWI WCCGGW 2 cut(s) 1639, 2561
Bse118I RCCGGY 1 cut(s) 2466
Bse1I ACTGG 8 cut(s) 179, 1078, 1501, 1582, 1825, 1985, 2186, 2377
Bse3DI GCAATG 2 cut(s) 312, 1597
BseBI CCWGG 3 cut(s) 499, 1161, 2298
BseDI CCNNGG 5 cut(s) 498, 1159, 1459, 1632, 1669
BseMI GCAATG 2 cut(s) 312, 1597
BseMII CTCAG 5 cut(s) 831, 1103, 1305, 2462, 2463
BseNI ACTGG 8 cut(s) 179, 1078, 1501, 1582, 1825, 1985, 2186, 2377
BsePI GCGCGC 1 cut(s) 20
BseRI GAGGAG 1 cut(s) 128
BseSI GKGCMC 3 cut(s) 1029, 1212, 1468
BseX3I CGGCCG 1 cut(s) 12
BseYI CCCAGC 2 cut(s) 585, 1106
BsgI GTGCAG 1 cut(s) 1812
Bsh1236I CGCG 4 cut(s) 22, 24, 72, 2548
Bsh1285I CGRYCG 1 cut(s) 15
BshFI GGCC 9 cut(s) 14, 138, 178, 231, 716, 1027, 2358, 2371, 2466
BshNI GGYRCC 2 cut(s) 1207, 1636
BsiEI CGRYCG 1 cut(s) 15
BsiHKAI GWGCWC 2 cut(s) 2413, 2477
BsiSI CCGG 4 cut(s) 1640, 1910, 2467, 2562
BslFI GGGAC 4 cut(s) 229, 1205, 1857, 2616
BsmAI GTCTC 5 cut(s) 82, 844, 1546, 1614, 1819
BsmBI CGTCTC 1 cut(s) 82
BsmFI GGGAC 4 cut(s) 229, 1205, 1857, 2616
BsmI GAATGC 1 cut(s) 2292
BsnI GGCC 9 cut(s) 14, 138, 178, 231, 716, 1027, 2358, 2371, 2466
Bso31I GGTCTC 1 cut(s) 1546
Bsp120I GGGCCC 1 cut(s) 1025
Bsp1286I GDGCHC 5 cut(s) 1029, 1212, 1468, 2413, 2477
Bsp1720I GCTNAGC 1 cut(s) 2471
Bsp19I CCATGG 1 cut(s) 1669
BspANI GGCC 9 cut(s) 14, 138, 178, 231, 716, 1027, 2358, 2371, 2466
BspCNI CTCAG 5 cut(s) 832, 1102, 1306, 2462, 2463
BspFNI CGCG 4 cut(s) 22, 24, 72, 2548
BspLI GGNNCC 6 cut(s) 1027, 1028, 1209, 1308, 1638, 2349
BspMAI CTGCAG 3 cut(s) 240, 1699, 2134
BspMI ACCTGC 3 cut(s) 618, 1276, 1904
BspPI GGATC 3 cut(s) 315, 734, 1358
BspT107I GGYRCC 2 cut(s) 1207, 1636
BspTNI GGTCTC 1 cut(s) 1546
BsrBI CCGCTC 1 cut(s) 2205
BsrDI GCAATG 2 cut(s) 312, 1597
BsrFI RCCGGY 1 cut(s) 2466
BsrI ACTGG 8 cut(s) 179, 1078, 1501, 1582, 1825, 1985, 2186, 2377
BssAI RCCGGY 1 cut(s) 2466
BssECI CCNNGG 5 cut(s) 498, 1159, 1459, 1632, 1669
BssHII GCGCGC 1 cut(s) 20
BssT1I CCWWGG 3 cut(s) 1459, 1632, 1669
Bst2UI CCWGG 3 cut(s) 499, 1161, 2298
Bst4CI ACNGT 6 cut(s) 208, 705, 834, 868, 1290, 1625
Bst6I CTCTTC 1 cut(s) 2161
BstAPI GCANNNNNTGC 2 cut(s) 2123, 2138
BstDEI CTNAG 7 cut(s) 518, 840, 1089, 1314, 2334, 2449, 2471
BstDSI CCRYGG 1 cut(s) 1669
BstENI CCTNNNNNAGG 1 cut(s) 692
BstFNI CGCG 4 cut(s) 22, 24, 72, 2548
BstHHI GCGC 5 cut(s) 22, 24, 72, 2086, 2550
BstMAI GTCTC 5 cut(s) 82, 844, 1546, 1614, 1819
BstMCI CGRYCG 1 cut(s) 15
BstNI CCWGG 3 cut(s) 499, 1161, 2298
BstNSI RCATGY 4 cut(s) 374, 473, 1232, 1829
BstSCI CCNGG 3 cut(s) 497, 1159, 2296
BstSFI CTRYAG 5 cut(s) 236, 278, 1695, 2103, 2130
BstSLI GKGCMC 3 cut(s) 1029, 1212, 1468
BstUI CGCG 4 cut(s) 22, 24, 72, 2548
BstV2I GAAGAC 2 cut(s) 258, 516
BstX2I RGATCY 1 cut(s) 320
BstXI CCANNNNNNTGG 1 cut(s) 1106
BstYI RGATCY 1 cut(s) 320
BstZI CGGCCG 1 cut(s) 12
BsuRI GGCC 9 cut(s) 14, 138, 178, 231, 716, 1027, 2358, 2371, 2466
BtgI CCRYGG 1 cut(s) 1669
BtsIMutI CAGTG 5 cut(s) 921, 1295, 1630, 1978, 2193
BveI ACCTGC 3 cut(s) 618, 1276, 1904
CaiI CAGNNNCTG 2 cut(s) 2111, 2138
CciNI GCGGCCGC 1 cut(s) 12
CfoI GCGC 5 cut(s) 22, 24, 72, 2086, 2550
Cfr10I RCCGGY 1 cut(s) 2466
Cfr13I GGNCC 7 cut(s) 82, 176, 715, 1025, 1026, 2357, 2573
CseI GACGC 1 cut(s) 61
Csp6I GTAC 5 cut(s) 792, 869, 1637, 2387, 2439
CviQI GTAC 5 cut(s) 792, 869, 1637, 2387, 2439
DdeI CTNAG 7 cut(s) 518, 840, 1089, 1314, 2334, 2449, 2471
EaeI YGGCCR 2 cut(s) 12, 2464
EagI CGGCCG 1 cut(s) 12
Eam1104I CTCTTC 1 cut(s) 2161
EarI CTCTTC 1 cut(s) 2161
EciI GGCGGA 1 cut(s) 39
Ecl136II GAGCTC 1 cut(s) 2475
EclXI CGGCCG 1 cut(s) 12
Eco130I CCWWGG 3 cut(s) 1459, 1632, 1669
Eco24I GRGCYC 2 cut(s) 1029, 2477
Eco31I GGTCTC 1 cut(s) 1546
Eco32I GATATC 1 cut(s) 1329
Eco47I GGWCC 2 cut(s) 82, 2573
Eco52I CGGCCG 1 cut(s) 12
Eco53kI GAGCTC 1 cut(s) 2475
Eco57I CTGAAG 3 cut(s) 377, 1734, 1824
EcoICRI GAGCTC 1 cut(s) 2475
EcoNI CCTNNNNNAGG 1 cut(s) 692
EcoO109I RGGNCCY 2 cut(s) 1025, 1026
EcoRI GAATTC 2 cut(s) 1042, 1923
EcoRII CCWGG 3 cut(s) 497, 1159, 2296
EcoRV GATATC 1 cut(s) 1329
EcoT14I CCWWGG 3 cut(s) 1459, 1632, 1669
EcoT22I ATGCAT 3 cut(s) 864, 964, 1197
EcoT38I GRGCYC 2 cut(s) 1029, 2477
ErhI CCWWGG 3 cut(s) 1459, 1632, 1669
Esp3I CGTCTC 1 cut(s) 82
FalI AAGNNNNNCTT 6 cut(s) 498, 530, 501, 533, 672, 704
FaqI GGGAC 4 cut(s) 229, 1205, 1857, 2616
FauI CCCGC 3 cut(s) 648, 777, 2613
FauNDI CATATG 2 cut(s) 285, 858
FbaI TGATCA 1 cut(s) 1555
FriOI GRGCYC 2 cut(s) 1029, 2477
FspBI CTAG 7 cut(s) 134, 261, 482, 995, 1788, 2028, 2367
GlaI GCGC 5 cut(s) 21, 23, 71, 2085, 2549
GsaI CCCAGC 2 cut(s) 589, 1110
GsuI CTGGAG 2 cut(s) 2169, 2319
HaeIII GGCC 9 cut(s) 14, 138, 178, 231, 716, 1027, 2358, 2371, 2466
HapII CCGG 4 cut(s) 1640, 1910, 2467, 2562
HgaI GACGC 1 cut(s) 61
HhaI GCGC 5 cut(s) 22, 24, 72, 2086, 2550
Hin6I GCGC 5 cut(s) 20, 22, 70, 2084, 2548
HinP1I GCGC 5 cut(s) 20, 22, 70, 2084, 2548
HincII GTYRAC 2 cut(s) 762, 2220
HindII GTYRAC 2 cut(s) 762, 2220
HindIII AAGCTT 4 cut(s) 389, 720, 2009, 2284
HinfI GANTC 8 cut(s) 929, 1475, 1517, 1607, 2197, 2263, 2339, 2543
HpaII CCGG 4 cut(s) 1640, 1910, 2467, 2562
HphI GGTGA 4 cut(s) 721, 1113, 2024, 2192
Hpy166II GTNNAC 5 cut(s) 190, 762, 2220, 2573, 2585
Hpy8I GTNNAC 5 cut(s) 190, 762, 2220, 2573, 2585
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 8 cut(s) 242, 448, 524, 546, 1155, 1758, 2072, 2178
HpyCH4III ACNGT 6 cut(s) 208, 705, 834, 868, 1290, 1625
HpyCH4IV ACGT 3 cut(s) 255, 559, 790
HpyF3I CTNAG 7 cut(s) 518, 840, 1089, 1314, 2334, 2449, 2471
HpySE526I ACGT 3 cut(s) 255, 559, 790
HspAI GCGC 5 cut(s) 20, 22, 70, 2084, 2548
KpnI GGTACC 1 cut(s) 1640
KroI GCCGGC 1 cut(s) 2466
KroNI GCCGGC 1 cut(s) 2468
Ksp22I TGATCA 1 cut(s) 1555
LmnI GCTCC 7 cut(s) 397, 415, 914, 1312, 1642, 2081, 2408
MaeI CTAG 7 cut(s) 134, 261, 482, 995, 1788, 2028, 2367
MaeII ACGT 3 cut(s) 255, 559, 790
MaeIII GTNAC 4 cut(s) 560, 930, 1168, 2030
MbiI CCGCTC 1 cut(s) 2205
MboII GAAGA 8 cut(s) 263, 521, 1145, 1418, 2148, 2224, 2544, 2602
MfeI CAATTG 2 cut(s) 1521, 1773
MflI RGATCY 1 cut(s) 320
MhlI GDGCHC 5 cut(s) 1029, 1212, 1468, 2413, 2477
MlyI GAGTC 4 cut(s) 938, 1526, 1616, 2191
MmeI TCCRAC 3 cut(s) 99, 1309, 1656
Mph1103I ATGCAT 3 cut(s) 864, 964, 1197
MroNI GCCGGC 1 cut(s) 2466
MroXI GAANNNNTTC 2 cut(s) 513, 2000
MslI CAYNNNNRTG 3 cut(s) 375, 1830, 1983
MspA1I CMGCKG 4 cut(s) 17, 244, 2108, 2138
MspI CCGG 4 cut(s) 1640, 1910, 2467, 2562
MspR9I CCNGG 3 cut(s) 499, 1161, 2298
MunI CAATTG 2 cut(s) 1521, 1773
Mva1269I GAATGC 1 cut(s) 2292
MvaI CCWGG 3 cut(s) 499, 1161, 2298
MvnI CGCG 4 cut(s) 22, 24, 72, 2548
NaeI GCCGGC 1 cut(s) 2468
NcoI CCATGG 1 cut(s) 1669
NdeI CATATG 2 cut(s) 285, 858
NgoMIV GCCGGC 1 cut(s) 2466
NlaIV GGNNCC 6 cut(s) 1027, 1028, 1209, 1308, 1638, 2349
NmuCI GTSAC 4 cut(s) 560, 930, 1168, 2030
NotI GCGGCCGC 1 cut(s) 12
NsiI ATGCAT 3 cut(s) 864, 964, 1197
NspI RCATGY 4 cut(s) 374, 473, 1232, 1829
PaeI GCATGC 2 cut(s) 473, 1829
PaqCI CACCTGC 1 cut(s) 1904
PauI GCGCGC 1 cut(s) 20
PciI ACATGT 1 cut(s) 1228
PctI GAATGC 1 cut(s) 2292
PdiI GCCGGC 1 cut(s) 2468
PdmI GAANNNNTTC 2 cut(s) 513, 2000
PfeI GAWTC 4 cut(s) 1475, 2263, 2339, 2543
PflMI CCANNNNNTGG 2 cut(s) 1675, 2582
PfoI TCCNGGA 1 cut(s) 2296
PleI GAGTC 4 cut(s) 937, 1525, 1615, 2191
PpsI GAGTC 4 cut(s) 937, 1525, 1615, 2191
PscI ACATGT 1 cut(s) 1228
PsiI TTATAA 1 cut(s) 1395
Psp124BI GAGCTC 1 cut(s) 2477
Psp6I CCWGG 3 cut(s) 497, 1159, 2296
PspFI CCCAGC 2 cut(s) 585, 1106
PspGI CCWGG 3 cut(s) 497, 1159, 2296
PspN4I GGNNCC 6 cut(s) 1027, 1028, 1209, 1308, 1638, 2349
PspOMI GGGCCC 1 cut(s) 1025
PspPI GGNCC 7 cut(s) 82, 176, 715, 1025, 1026, 2357, 2573
PstI CTGCAG 3 cut(s) 240, 1699, 2134
PstNI CAGNNNCTG 2 cut(s) 2111, 2138
PsuI RGATCY 1 cut(s) 320
PteI GCGCGC 1 cut(s) 20
PvuII CAGCTG 2 cut(s) 2108, 2138
RsaI GTAC 5 cut(s) 793, 870, 1638, 2388, 2440
RsaNI GTAC 5 cut(s) 792, 869, 1637, 2387, 2439
RseI CAYNNNNRTG 3 cut(s) 375, 1830, 1983
SacI GAGCTC 1 cut(s) 2477
Sau96I GGNCC 7 cut(s) 82, 176, 715, 1025, 1026, 2357, 2573
SchI GAGTC 4 cut(s) 938, 1526, 1616, 2191
ScrFI CCNGG 3 cut(s) 499, 1161, 2298
SduI GDGCHC 5 cut(s) 1029, 1212, 1468, 2413, 2477
SfcI CTRYAG 5 cut(s) 236, 278, 1695, 2103, 2130
SinI GGWCC 2 cut(s) 82, 2573
SmiMI CAYNNNNRTG 3 cut(s) 375, 1830, 1983
SmlI CTYRAG 4 cut(s) 675, 884, 1514, 2206
SmoI CTYRAG 4 cut(s) 675, 884, 1514, 2206
SpeI ACTAGT 1 cut(s) 1787
SphI GCATGC 2 cut(s) 473, 1829
SspMI CTAG 7 cut(s) 134, 261, 482, 995, 1788, 2028, 2367
SstI GAGCTC 1 cut(s) 2477
StyD4I CCNGG 3 cut(s) 497, 1159, 2296
StyI CCWWGG 3 cut(s) 1459, 1632, 1669
TaaI ACNGT 6 cut(s) 208, 705, 834, 868, 1290, 1625
TaiI ACGT 3 cut(s) 258, 562, 793
TaqI TCGA 6 cut(s) 32, 97, 200, 1095, 1262, 1661
TatI WGTACW 2 cut(s) 868, 2386
TauI GCSGC 3 cut(s) 14, 17, 1838
TfiI GAWTC 4 cut(s) 1475, 2263, 2339, 2543
TscAI CASTG 5 cut(s) 928, 1295, 1630, 1985, 2193
TseFI GTSAC 4 cut(s) 560, 930, 1168, 2030
Tsp45I GTSAC 4 cut(s) 560, 930, 1168, 2030
TspGWI ACGGA 2 cut(s) 999, 2602
TspRI CASTG 5 cut(s) 928, 1295, 1630, 1985, 2193
Van91I CCANNNNNTGG 2 cut(s) 1675, 2582
VpaK11BI GGWCC 2 cut(s) 82, 2573
XagI CCTNNNNNAGG 1 cut(s) 692
XapI RAATTY 5 cut(s) 949, 1042, 1572, 1923, 2565
XbaI TCTAGA 1 cut(s) 260
XceI RCATGY 4 cut(s) 374, 473, 1232, 1829
XcmI CCANNNNNNNNNTGG 2 cut(s) 430, 1676
XmnI GAANNNNTTC 2 cut(s) 513, 2000
XspI CTAG 7 cut(s) 134, 261, 482, 995, 1788, 2028, 2367
Zsp2I ATGCAT 3 cut(s) 864, 964, 1197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.