Rh1AG460200

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0002123
Physical Location & Seq
Forward (+)
67784126 .. 67789838
5713 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG460200.1

Sequence Viewer

Length: 2544 bp
ATGGAGGCTACGGCCGCCGCGCGCGGTGGTTCGATGCCGGCGATGACGCAAGCTCAGACACGCAAGCAGTGGCGCGCCGTCTCGGAGCATCATTCGGCTCGGAACATCGGCGATGAGGAGCTGGAGCGATCAAAGTTAGGCCATTCTGATGAGAGAACAATATATGAGGTGCAGCAGGGAAGAGAGCCAGTTGATGTAGACTTTTGTTCGATCTCCATAGATGGGACTTTGGACCATGACCTCTTGCAGCAGCGGCTTCATGATGTTGTCAGGCAAAGAGAGGAACTGCAGCATATGGAGACTGAGCTTAGAGCTCAAATGATTGCAAGATCTGAGATAATGGATATACAAAATAACTTTGATGCTCAACTGAAGGAGCATGCTAATGCTGCTTCCAAGCTTCAGGAGCAACTCCATGAAAAGGAGCAGGCCATACATGATTTGGAGAGGGAATTGGAAGAAAAAGATAGAGAGCTGCATGCTACCAAGTTAGATAATGAAGCGGCCTGGGCCAAAGAGGGCCTTCTTAGAGAACAGAACAAAGAATTAGCAACTTTCAGAAGAGAGCGTGACCATTCAGAAGCTGAAAGAGCCCAGCATATACAGCAATTACATGATCTTCAAGAACATATTCAAGAAAAAGAGAGGCAACTTATTGAGTTGCAGGAACAGCATAGGCTTGCTCAAGAAGCCATTCTATTTAAGGATGAACAACTGAGCGAAGCCCAAGCTTGGATCACCCGTGTTCAAGAAATGGATGCTTTGCAGTCAACTACACTTCAAAATCAGTTGCGGGAACATTCAGAACACTATAATCAGCTCTGGCTTGGTTGGCAAAGACAGTTTGCTGAAATGGAGAGACATCATATGCATACGGTACAACAGCTTCAGCTTGAGTTAGCTGATGCCAGACAAAGAAGTGGAACTTACACTGATGAATCACGTGCAGCAAATTCAACTTCAAAGGATGCATCTCAGTTTGGTCGGAACAATGGAAACCAGATTGATATAAATACGTCAAATGGAAATACAGGGGCCCTCCCAAATGGGAATTCACAGGACGTTTCATCGTTTTCTTCAACTGTCAATGCATCAAGTCAGGTTGACCATGTTCCTAGTGTTCCAATTGGTCCTTCGTCTCTACTTGGGATGCCTCCCTTTCTTCCACCTGGACAGGTGACTGGTATGCATCCATTTGTTCTGCATCAACCTGGGGTTCCCCATTCCATGCCACCACAGGTTCCTCAATCACATGTGGGGAATTTTCACTCAATACCTGCAATGTCATCTCTCCAACAGTGGCAGAACCAACAGGCTCCATCCGAGAGTTTGCAGATAGCTACACAAACTGAACCTCCATCTTCCCAAAATGATCAAAACCTGATTAGATCAGATGCAAAGTATCACTATGAAACTTCTGTTAATGGGCAACCATTTCATCAAGACTATTTGGATGTTCAAATTCGCGAAGGGGCAGAGCCTGAGCCTGTGATATCATCTTCCCCCGAGGAAGCACAGGTTCTTGAGTCAATTAATAGCAGTTACTTGGTCTCACCCCAAACTGATCAGAGCTTGCAACAAATCTCTTCCCAATTTACTGATTCTTTAAGATTGGATTCTCTTGAGAAGAGCAGTGAAACCAAGGCACATGAGCAGAATGTTCAGACCTTGATCGATCATGGGTTGGATGGACAAGTTTTAACGGCTGAGAAACCAAATTCTGCTACCAAGTCCTCAAAATCTGACACTCCAATCCATTCAGTCAATCTCAATGAAATTACAATAAACAATTCCCCTGGTACAGGTTTGCCTGAGTCCTTTGTCTCAACTGGACACACCAATGCACCATCAGTGGGTAGGACTTCGGAGACTGCTCTTCTAGATGAAAGGTCATTGTTGGCTTGCATGGTTCGGACAATACCAGCTGGTGGTAGAATTAGGATCAGTTCGACGCTGCCGAATAGGCTCGGGAAGATGCTTGCACCTTTACACTGGCATGATTACAAGAAAAAGTATGGAAAGCTAGATGATTTCGTTGCTGCTCATACTGAACTATTTGTGATTGAGGGGGACTATATTCAGCTGCGTGAAGGAGCTCAAGAGATGATAGCAGCTACAGCCGCCGTTGCCAGAGTTGCTGCTGCTGCAGCAGCATCATCCCCCTACTCTTCATGTTTGCCTTCTGTGGCTGTTACTCCAGTGGCACAGACTCACCGCTTAAAGAAGATATTATCTCTTGATTCCAAAAATGTGGTTACTTCTACTCCAAATGCAAATAATGCTCACTTGCAGTCTGTGAAGCAGAATCAGCAATTAAATGGTGTATCTTTTGGTGTTTCGGGAGGTATGTCGAACGTAAAAATTTTGAGCAAATCCAAGGACATGAATGGGCCTGAACCTACTCCCAGCCAGTCATCTGTACTTCATAATGGTGGAAATGGAGCTCCTCTGGACAGGTCAATGGCCAATGGCCGGCCGAGCTCAAATTTTGTTGGGAAACAGCATGGCAGGATGACTAATTCTGCATTTACCTCCAGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

847

Amino Acids

93.92

Weight (kDa)

5.7

Isoelectric Point (pI)

57.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7725 PF24851 626 - 696 8.7e-39 Domain of unknown function (DUF7725)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1285
AccB7I CCANNNNNTGG 1 cut(s) 1928
AccI GTMKAC 1 cut(s) 198
AccII CGCG 5 cut(s) 20, 22, 24, 75, 1467
AciI CCGC 8 cut(s) 15, 18, 24, 253, 503, 793, 2121, 2215
AclWI GGATC 2 cut(s) 743, 1949
AcoI YGGCCR 4 cut(s) 12, 2463, 2470, 2474
AcsI RAATTY 7 cut(s) 952, 1051, 1261, 1461, 1717, 2361, 2485
AcuI CTGAAG 3 cut(s) 386, 392, 872
AcvI CACGTG 1 cut(s) 944
AfaI GTAC 3 cut(s) 879, 1801, 2421
AfiI CCNNNNNNNGG 7 cut(s) 222, 421, 732, 1802, 1853, 1928, 2472
AflIII ACRYGT 1 cut(s) 1252
AgsI TTSAA 8 cut(s) 623, 635, 749, 782, 957, 963, 1080, 1460
AjnI CCWGG 4 cut(s) 506, 1168, 1210, 1795
AjuI GAANNNNNNNTTGG 4 cut(s) 1036, 1068, 1117, 1149
Alw21I GWGCWC 4 cut(s) 316, 2098, 2446, 2483
Alw26I GTCTC 7 cut(s) 85, 293, 853, 1143, 1555, 1828, 1862
AlwI GGATC 2 cut(s) 743, 1949
AlwNI CAGNNNCTG 2 cut(s) 584, 1481
Ama87I CYCGRG 2 cut(s) 1505, 1967
ApaI GGGCCC 1 cut(s) 1039
ApoI RAATTY 7 cut(s) 952, 1051, 1261, 1461, 1717, 2361, 2485
AscI GGCGCGCC 1 cut(s) 73
AseI ATTAAT 1 cut(s) 1533
Asp700I GAANNNNTTC 2 cut(s) 630, 693
AspLEI GCGC 4 cut(s) 22, 24, 75, 77
AspS9I GGNCC 7 cut(s) 232, 510, 520, 1035, 1036, 1130, 2390
AsuHPI GGTGA 4 cut(s) 730, 1189, 1545, 2204
AvaI CYCGRG 2 cut(s) 1505, 1967
AvaII GGWCC 2 cut(s) 232, 1130
BaeGI GKGCMC 1 cut(s) 1039
BalI TGGCCA 1 cut(s) 2465
BanII GRGCYC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
BarI GAAGNNNNNNTAC 2 cut(s) 870, 902
BbrPI CACGTG 1 cut(s) 944
Bbv12I GWGCWC 4 cut(s) 316, 2098, 2446, 2483
BccI CCATC 5 cut(s) 215, 1327, 1366, 1682, 1855
BceAI ACGGC 4 cut(s) 27, 62, 1719, 2108
BciT130I CCWGG 4 cut(s) 508, 1170, 1212, 1797
BclI TGATCA 2 cut(s) 1372, 1564
BcoDI GTCTC 7 cut(s) 85, 293, 853, 1143, 1555, 1828, 1862
BfaI CTAG 3 cut(s) 1116, 1880, 2024
BfmI CTRYAG 3 cut(s) 287, 2115, 2145
BfuAI ACCTGC 1 cut(s) 1285
BglI GCCNNNNNGGC 1 cut(s) 1963
BglII AGATCT 1 cut(s) 329
Bme1390I CCNGG 4 cut(s) 508, 1170, 1212, 1797
Bme18I GGWCC 2 cut(s) 232, 1130
BmeT110I CYCGRG 2 cut(s) 1505, 1967
BmgT120I GGNCC 7 cut(s) 232, 510, 520, 1035, 1036, 1130, 2390
BmiI GGNNCC 5 cut(s) 1036, 1037, 1218, 1242, 1317
BmrFI CCNGG 4 cut(s) 508, 1170, 1212, 1797
BpmI CTGGAG 3 cut(s) 143, 2181, 2518
Bpu10I CCTNAGC 1 cut(s) 1482
BpuEI CTTGAG 5 cut(s) 669, 914, 1544, 1643, 2082
Bsa29I ATCGAT 1 cut(s) 1674
BsaAI YACGTR 1 cut(s) 944
BsaI GGTCTC 1 cut(s) 1555
BsaJI CCNNGG 6 cut(s) 507, 1211, 1506, 1641, 1795, 2376
BsaXI ACNNNNNCTCC 4 cut(s) 1339, 1369, 2248, 2278
Bsc4I CCNNNNNNNGG 7 cut(s) 222, 421, 732, 1802, 1853, 1928, 2472
Bse118I RCCGGY 2 cut(s) 37, 2472
Bse1I ACTGG 6 cut(s) 188, 1186, 1834, 1997, 2198, 2410
Bse3DI GCAATG 1 cut(s) 1287
BseBI CCWGG 4 cut(s) 508, 1170, 1212, 1797
BseCI ATCGAT 1 cut(s) 1674
BseDI CCNNGG 6 cut(s) 507, 1211, 1506, 1641, 1795, 2376
BseLI CCNNNNNNNGG 7 cut(s) 222, 421, 732, 1802, 1853, 1928, 2472
BseMI GCAATG 1 cut(s) 1287
BseMII CTCAG 8 cut(s) 68, 294, 324, 707, 989, 1473, 1698, 1803
BseNI ACTGG 6 cut(s) 188, 1186, 1834, 1997, 2198, 2410
BsePI GCGCGC 2 cut(s) 20, 73
BseRI GAGGAG 2 cut(s) 131, 2436
BseSI GKGCMC 1 cut(s) 1039
BseX3I CGGCCG 2 cut(s) 12, 2474
BseYI CCCAGC 2 cut(s) 594, 2405
BsgI GTGCAG 2 cut(s) 191, 966
Bsh1236I CGCG 5 cut(s) 20, 22, 24, 75, 1467
Bsh1285I CGRYCG 2 cut(s) 15, 2477
BshVI ATCGAT 1 cut(s) 1674
BsiEI CGRYCG 2 cut(s) 15, 2477
BsiHKAI GWGCWC 4 cut(s) 316, 2098, 2446, 2483
BsiHKCI CYCGRG 2 cut(s) 1505, 1967
BsiSI CCGG 2 cut(s) 38, 2473
BslFI GGGAC 2 cut(s) 238, 2084
BslI CCNNNNNNNGG 7 cut(s) 222, 421, 732, 1802, 1853, 1928, 2472
BsmAI GTCTC 7 cut(s) 85, 293, 853, 1143, 1555, 1828, 1862
BsmBI CGTCTC 2 cut(s) 85, 1143
BsmFI GGGAC 2 cut(s) 238, 2084
Bso31I GGTCTC 1 cut(s) 1555
BsoBI CYCGRG 2 cut(s) 1505, 1967
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
Bsp68I TCGCGA 1 cut(s) 1467
BspACI CCGC 8 cut(s) 15, 18, 24, 253, 503, 793, 2121, 2215
BspCNI CTCAG 8 cut(s) 67, 295, 325, 708, 988, 1474, 1699, 1804
BspDI ATCGAT 1 cut(s) 1674
BspFNI CGCG 5 cut(s) 20, 22, 24, 75, 1467
BspHI TCATGA 1 cut(s) 259
BspLI GGNNCC 5 cut(s) 1036, 1037, 1218, 1242, 1317
BspMAI CTGCAG 2 cut(s) 291, 2149
BspMI ACCTGC 1 cut(s) 1285
BspPI GGATC 2 cut(s) 743, 1949
BspQI GCTCTTC 2 cut(s) 1622, 1881
BspTNI GGTCTC 1 cut(s) 1555
BsrDI GCAATG 1 cut(s) 1287
BsrFI RCCGGY 2 cut(s) 37, 2472
BsrI ACTGG 6 cut(s) 188, 1186, 1834, 1997, 2198, 2410
BssAI RCCGGY 2 cut(s) 37, 2472
BssECI CCNNGG 6 cut(s) 507, 1211, 1506, 1641, 1795, 2376
BssHII GCGCGC 2 cut(s) 20, 73
BssT1I CCWWGG 2 cut(s) 1641, 2376
Bst2UI CCWGG 4 cut(s) 508, 1170, 1212, 1797
Bst4CI ACNGT 4 cut(s) 843, 877, 1084, 1299
Bst6I CTCTTC 6 cut(s) 175, 556, 1591, 1622, 1881, 2173
BstAPI GCANNNNNTGC 1 cut(s) 2279
BstBAI YACGTR 1 cut(s) 944
BstENI CCTNNNNNAGG 1 cut(s) 1800
BstFNI CGCG 5 cut(s) 20, 22, 24, 75, 1467
BstHHI GCGC 4 cut(s) 22, 24, 75, 77
BstMAI GTCTC 7 cut(s) 85, 293, 853, 1143, 1555, 1828, 1862
BstMCI CGRYCG 2 cut(s) 15, 2477
BstNI CCWGG 4 cut(s) 508, 1170, 1212, 1797
BstNSI RCATGY 3 cut(s) 383, 482, 1256
BstSCI CCNGG 4 cut(s) 506, 1168, 1210, 1795
BstSFI CTRYAG 3 cut(s) 287, 2115, 2145
BstSLI GKGCMC 1 cut(s) 1039
BstUI CGCG 5 cut(s) 20, 22, 24, 75, 1467
BstX2I RGATCY 1 cut(s) 329
BstXI CCANNNNNNTGG 1 cut(s) 2251
BstYI RGATCY 1 cut(s) 329
BstZI CGGCCG 2 cut(s) 12, 2474
Bsu15I ATCGAT 1 cut(s) 1674
BsuTUI ATCGAT 1 cut(s) 1674
BtgZI GCGATG 2 cut(s) 56, 126
BtsI GCAGTG 2 cut(s) 74, 1639
BtsIMutI CAGTG 7 cut(s) 74, 930, 1304, 1639, 1857, 1990, 2205
BtuMI TCGCGA 1 cut(s) 1467
BveI ACCTGC 1 cut(s) 1285
CaiI CAGNNNCTG 2 cut(s) 584, 1481
CciI TCATGA 1 cut(s) 259
CfoI GCGC 4 cut(s) 22, 24, 75, 77
Cfr10I RCCGGY 2 cut(s) 37, 2472
Cfr13I GGNCC 7 cut(s) 232, 510, 520, 1035, 1036, 1130, 2390
ClaI ATCGAT 1 cut(s) 1674
CseI GACGC 2 cut(s) 55, 1960
Csp6I GTAC 3 cut(s) 878, 1800, 2420
CviQI GTAC 3 cut(s) 878, 1800, 2420
EaeI YGGCCR 4 cut(s) 12, 2463, 2470, 2474
EagI CGGCCG 2 cut(s) 12, 2474
Eam1104I CTCTTC 6 cut(s) 175, 556, 1591, 1622, 1881, 2173
EarI CTCTTC 6 cut(s) 175, 556, 1591, 1622, 1881, 2173
Ecl136II GAGCTC 4 cut(s) 314, 2096, 2444, 2481
EclXI CGGCCG 2 cut(s) 12, 2474
Eco130I CCWWGG 2 cut(s) 1641, 2376
Eco24I GRGCYC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
Eco31I GGTCTC 1 cut(s) 1555
Eco32I GATATC 1 cut(s) 1494
Eco47I GGWCC 2 cut(s) 232, 1130
Eco52I CGGCCG 2 cut(s) 12, 2474
Eco53kI GAGCTC 4 cut(s) 314, 2096, 2444, 2481
Eco57I CTGAAG 3 cut(s) 386, 392, 872
Eco72I CACGTG 1 cut(s) 944
Eco88I CYCGRG 2 cut(s) 1505, 1967
EcoICRI GAGCTC 4 cut(s) 314, 2096, 2444, 2481
EcoNI CCTNNNNNAGG 1 cut(s) 1800
EcoO109I RGGNCCY 3 cut(s) 520, 1035, 1036
EcoRI GAATTC 1 cut(s) 1051
EcoRII CCWGG 4 cut(s) 506, 1168, 1210, 1795
EcoRV GATATC 1 cut(s) 1494
EcoT14I CCWWGG 2 cut(s) 1641, 2376
EcoT22I ATGCAT 4 cut(s) 873, 973, 1093, 1191
EcoT38I GRGCYC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
ErhI CCWWGG 2 cut(s) 1641, 2376
Esp3I CGTCTC 2 cut(s) 85, 1143
FalI AAGNNNNNCTT 4 cut(s) 507, 539, 910, 942
FaqI GGGAC 2 cut(s) 238, 2084
FauI CCCGC 1 cut(s) 786
FauNDI CATATG 2 cut(s) 294, 867
FbaI TGATCA 2 cut(s) 1372, 1564
FblI GTMKAC 1 cut(s) 198
FriOI GRGCYC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
FseI GGCCGGCC 1 cut(s) 2476
FspBI CTAG 3 cut(s) 1116, 1880, 2024
GlaI GCGC 4 cut(s) 21, 23, 74, 76
GsaI CCCAGC 2 cut(s) 598, 2409
GsuI CTGGAG 3 cut(s) 143, 2181, 2518
HapII CCGG 2 cut(s) 38, 2473
HgaI GACGC 2 cut(s) 55, 1960
HhaI GCGC 4 cut(s) 22, 24, 75, 77
Hin6I GCGC 4 cut(s) 20, 22, 73, 75
HinP1I GCGC 4 cut(s) 20, 22, 73, 75
HincII GTYRAC 2 cut(s) 771, 1105
HindII GTYRAC 2 cut(s) 771, 1105
HindIII AAGCTT 2 cut(s) 398, 729
HinfI GANTC 8 cut(s) 938, 1526, 1601, 1616, 1814, 2209, 2240, 2305
HpaII CCGG 2 cut(s) 38, 2473
HphI GGTGA 4 cut(s) 730, 1189, 1545, 2204
Hpy166II GTNNAC 3 cut(s) 199, 771, 1105
Hpy8I GTNNAC 3 cut(s) 199, 771, 1105
Hpy99I CGWCG 1 cut(s) 1954
HpyAV CCTTC 6 cut(s) 367, 533, 1143, 1463, 2084, 2190
HpyCH4III ACNGT 4 cut(s) 843, 877, 1084, 1299
HpyCH4IV ACGT 4 cut(s) 943, 1016, 1062, 2355
HpySE526I ACGT 4 cut(s) 943, 1016, 1062, 2355
HspAI GCGC 4 cut(s) 20, 22, 73, 75
KroI GCCGGC 2 cut(s) 37, 2472
KroNI GCCGGC 2 cut(s) 39, 2474
Ksp22I TGATCA 2 cut(s) 1372, 1564
LguI GCTCTTC 2 cut(s) 1622, 1881
MaeI CTAG 3 cut(s) 1116, 1880, 2024
MaeII ACGT 4 cut(s) 943, 1016, 1062, 2355
MaeIII GTNAC 5 cut(s) 569, 1177, 1541, 2191, 2254
MauBI CGCGCGCG 1 cut(s) 20
MfeI CAATTG 1 cut(s) 1125
MflI RGATCY 1 cut(s) 329
MhlI GDGCHC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
MlsI TGGCCA 1 cut(s) 2465
MluNI TGGCCA 1 cut(s) 2465
MlyI GAGTC 3 cut(s) 1535, 1823, 2203
MmeI TCCRAC 3 cut(s) 965, 1318, 1665
Mox20I TGGCCA 1 cut(s) 2465
Mph1103I ATGCAT 4 cut(s) 873, 973, 1093, 1191
MroNI GCCGGC 2 cut(s) 37, 2472
MroXI GAANNNNTTC 2 cut(s) 630, 693
MscI TGGCCA 1 cut(s) 2465
MseI TTAA 7 cut(s) 702, 1422, 1533, 1607, 1700, 2219, 2315
MslI CAYNNNNRTG 5 cut(s) 147, 384, 1839, 1995, 2430
Msp20I TGGCCA 1 cut(s) 2465
MspA1I CMGCKG 3 cut(s) 253, 1925, 2083
MspI CCGG 2 cut(s) 38, 2473
MspR9I CCNGG 4 cut(s) 508, 1170, 1212, 1797
MunI CAATTG 1 cut(s) 1125
MvaI CCWGG 4 cut(s) 508, 1170, 1212, 1797
MvnI CGCG 5 cut(s) 20, 22, 24, 75, 1467
NaeI GCCGGC 2 cut(s) 39, 2474
NdeI CATATG 2 cut(s) 294, 867
NgoMIV GCCGGC 2 cut(s) 37, 2472
NlaIV GGNNCC 5 cut(s) 1036, 1037, 1218, 1242, 1317
NmeAIII GCCGAG 1 cut(s) 2502
NmuCI GTSAC 2 cut(s) 569, 1177
NruI TCGCGA 1 cut(s) 1467
NsiI ATGCAT 4 cut(s) 873, 973, 1093, 1191
NspI RCATGY 3 cut(s) 383, 482, 1256
PaeI GCATGC 2 cut(s) 383, 482
PagI TCATGA 1 cut(s) 259
PalAI GGCGCGCC 1 cut(s) 73
PauI GCGCGC 2 cut(s) 20, 73
PciI ACATGT 1 cut(s) 1252
PciSI GCTCTTC 2 cut(s) 1622, 1881
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 1955
PdiI GCCGGC 2 cut(s) 39, 2474
PdmI GAANNNNTTC 2 cut(s) 630, 693
PfeI GAWTC 5 cut(s) 938, 1601, 1616, 2240, 2305
PflMI CCANNNNNTGG 1 cut(s) 1928
PleI GAGTC 3 cut(s) 1534, 1822, 2203
PmaCI CACGTG 1 cut(s) 944
PmlI CACGTG 1 cut(s) 944
PpsI GAGTC 3 cut(s) 1534, 1822, 2203
Ppu21I YACGTR 1 cut(s) 944
PscI ACATGT 1 cut(s) 1252
PshBI ATTAAT 1 cut(s) 1533
Psp124BI GAGCTC 4 cut(s) 316, 2098, 2446, 2483
Psp6I CCWGG 4 cut(s) 506, 1168, 1210, 1795
PspCI CACGTG 1 cut(s) 944
PspFI CCCAGC 2 cut(s) 594, 2405
PspGI CCWGG 4 cut(s) 506, 1168, 1210, 1795
PspN4I GGNNCC 5 cut(s) 1036, 1037, 1218, 1242, 1317
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 7 cut(s) 232, 510, 520, 1035, 1036, 1130, 2390
PstI CTGCAG 2 cut(s) 291, 2149
PstNI CAGNNNCTG 2 cut(s) 584, 1481
PsuI RGATCY 1 cut(s) 329
PteI GCGCGC 2 cut(s) 20, 73
PvuII CAGCTG 2 cut(s) 1925, 2083
RigI GGCCGGCC 1 cut(s) 2476
RruI TCGCGA 1 cut(s) 1467
RsaI GTAC 3 cut(s) 879, 1801, 2421
RsaNI GTAC 3 cut(s) 878, 1800, 2420
RseI CAYNNNNRTG 5 cut(s) 147, 384, 1839, 1995, 2430
SacI GAGCTC 4 cut(s) 316, 2098, 2446, 2483
SapI GCTCTTC 2 cut(s) 1622, 1881
SaqAI TTAA 7 cut(s) 702, 1422, 1533, 1607, 1700, 2219, 2315
Sau96I GGNCC 7 cut(s) 232, 510, 520, 1035, 1036, 1130, 2390
SchI GAGTC 3 cut(s) 1535, 1823, 2203
ScrFI CCNGG 4 cut(s) 508, 1170, 1212, 1797
SduI GDGCHC 6 cut(s) 316, 595, 1039, 2098, 2446, 2483
SfcI CTRYAG 3 cut(s) 287, 2115, 2145
SgsI GGCGCGCC 1 cut(s) 73
SinI GGWCC 2 cut(s) 232, 1130
SmiMI CAYNNNNRTG 5 cut(s) 147, 384, 1839, 1995, 2430
SmlI CTYRAG 5 cut(s) 684, 893, 1523, 1622, 2097
SmoI CTYRAG 5 cut(s) 684, 893, 1523, 1622, 2097
SphI GCATGC 2 cut(s) 383, 482
SsiI CCGC 8 cut(s) 15, 18, 24, 253, 503, 793, 2121, 2215
SspMI CTAG 3 cut(s) 1116, 1880, 2024
SstI GAGCTC 4 cut(s) 316, 2098, 2446, 2483
StyD4I CCNGG 4 cut(s) 506, 1168, 1210, 1795
StyI CCWWGG 2 cut(s) 1641, 2376
TaaI ACNGT 4 cut(s) 843, 877, 1084, 1299
TaiI ACGT 4 cut(s) 946, 1019, 1065, 2358
TaqI TCGA 5 cut(s) 32, 209, 1674, 1949, 2351
TatI WGTACW 1 cut(s) 2419
TauI GCSGC 5 cut(s) 17, 20, 256, 506, 2123
TfiI GAWTC 5 cut(s) 938, 1601, 1616, 2240, 2305
Tru1I TTAA 7 cut(s) 702, 1422, 1533, 1607, 1700, 2219, 2315
Tru9I TTAA 7 cut(s) 702, 1422, 1533, 1607, 1700, 2219, 2315
TscAI CASTG 7 cut(s) 74, 937, 1304, 1639, 1857, 1997, 2205
TseFI GTSAC 2 cut(s) 569, 1177
Tsp45I GTSAC 2 cut(s) 569, 1177
TspRI CASTG 7 cut(s) 74, 937, 1304, 1639, 1857, 1997, 2205
Van91I CCANNNNNTGG 1 cut(s) 1928
VpaK11BI GGWCC 2 cut(s) 232, 1130
VspI ATTAAT 1 cut(s) 1533
XagI CCTNNNNNAGG 1 cut(s) 1800
XapI RAATTY 7 cut(s) 952, 1051, 1261, 1461, 1717, 2361, 2485
XbaI TCTAGA 1 cut(s) 1879
XceI RCATGY 3 cut(s) 383, 482, 1256
XcmI CCANNNNNNNNNTGG 1 cut(s) 439
XmiI GTMKAC 1 cut(s) 198
XmnI GAANNNNTTC 2 cut(s) 630, 693
XspI CTAG 3 cut(s) 1116, 1880, 2024
Zsp2I ATGCAT 4 cut(s) 873, 973, 1093, 1191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.