Rh1BG416400

isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0002123
Physical Location & Seq
Forward (+)
53849294 .. 53856331
7038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG416400.1

Sequence Viewer

Length: 2088 bp
ATGGAGGCTACGGCCGCCGCGCGCGGTGGTTCGATGCCGGCGATGACGCAAGCTCAGACGCGCAAGCAGTGGCGCGCCGTCTCGGAGCATCATTCGGCTCGGAACATCGGCGATGAGGAGCTGGAGCGATCAAAGTTAGGCCATTCTGATGAGAGAACAATATATGAGCAGGGAAGAGAGCCAGTTGATGTAGACTTTTGTTCGATCTCCATAGATGGGACTTTGGACCATGACCTCTTGCAGCAGCGGCTTCACGATATTGTCAGGCAAAGAGAGGAACTGCAGCATATGGAGACTGAGCTTAGAGCTCAAATGATTGCAAGATCTGAGATAATGGATATACAAAATAACTTTGATGCTCAACTGAAGGAGCATGCTAATGCTGCTTCCAAGCTTCAGGAGCAACTCCATGAAAAGGAGCAGGCCATACATGATTTGGAGAGGGAATTGGAAGAAAAAGATAGAGAGCTGCATGCTACCAAGTTAGATAATGAAGCGGCCTGGGCCAAAGAGGGCCTTCTTAGAGAACAGAACAAAGAATTAGCAACTTTCAGAAGAGAGCGTGACCATTCAGAAGCTGAAAGAGCCCAGCATATACAGCAATTACATGATCTTCAAGAACATATTCAAGAAAAAGAGAGGCAAATTATTGAGTTGCAGGAACAGCATAGGCTTGCTCAAGAAGCCATTCTATTTAAGGATGAACAACTGAGCGAAGCCCAAGCTTGGATCACCCGTGTTCAAGAAATGGATGCTTTGCAGTCAACTACACTTCAAAATCAGTTGCGGGAACATTCAGAACACTATAATCAGCTCTGGCTTGGTTGGCAAAGACAGTTTGCTGAAATGGAGAGACATCATATGCATACGGTACAACAGCTTCAGCTTGAGTTAGCTGATGCCAGACAAAGAAGTGGAACTTACACTGATGAATCACGTGCAGCAAATTCAACTTCAAAGGATGCATCTCAATTTGGTCGGAACAATGGAAACCAGATTGATATAAATACGTCAAATGGAAATACAGGGGCCCTCCCAAATGGGAATTCACATGACGTTTCATCGTTTTCTTCAACTGTCAATGCATCAAGTCAGGTTGACCATGTTCCTAGTGTTCCAATTGGTCCTTCGTCTCTACTTGGGATGCCTCCCTTTCTTCCACCTGGACAGGTGACTGGTATGCATCCATTTGTTCTGCATCAACCTGGGGTTCCCCATTCCATGCCACCACAGGTTCCCCAATCACATGTGGGGAATTTTCACTCAATACCTGCAATGTCATCTCTCCAACAGTGGCAAAACCAACAGGCTCCGTCCGAGAGTTTGCAGATAGCTACACAAACTGAACCTCCATCTTCCCAAAATGATCAAAACCTGATAAGATCAGATGCAAAGTATCACTATGAAACTTCTGTTAATGGGCAACCATTTCATCAAGACTATTTGGATGTTCAAATTCGCGAAGGGGCAGAGCCTGAGCCTGTGATATCATCTTCCCCCGAGGAAGCACAGGTTCTTGAGTCAATTAATAGCAGTTACTTGGTCTCACCCCAAACTGATCAGAGCTTGCAACAAATGTCTTCCCAATTTACTGATTCTTTAAGATTGGATTCCCTTGAGAAGAGCAGTGAAACCAAGGCACATGAGCAGAATGTTCAGACCTTGATCGATCATGGGTTGGACGGACAAGTTTTAACGGCTGAGAAACCAAATTCTGCTGCCAAGTCCTCAAAATCTGACACTCCAATTCATTCAGTCAATCTCAATGAAATTACAATAAACAATTCCCCTGGTACAGGTTTGCCTGAGTCCTTTGTCTCAACTGGACACACCAATGCACCATCAGTGGGTAGGACTTCGGAGACCGCTCTTCTAGATGAAAGGTCATTGTTGGCTTGCATGGTTCGGACAATACCAGCTGGTGGTAGAATTAGGATCAGTTCGACGCTGCCGAATAGGCTTGGGAAGATGCTTGCACCTTTACACTGGCATGATTACAAGAAAAAGTATGGAAAGCTAGATGATTTCGTTGCTGCTCATACTGAAGTGAGTTCTGCGATGATTTCAAATGCATCTATGTTTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

695

Amino Acids

78.03

Weight (kDa)

5.35

Isoelectric Point (pI)

58.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7725 PF24851 624 - 684 8.8e-34 Domain of unknown function (DUF7725)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1279
AccB7I CCANNNNNTGG 1 cut(s) 1922
AccBSI CCGCTC 1 cut(s) 1868
AccI GTMKAC 1 cut(s) 192
AccII CGCG 6 cut(s) 20, 22, 24, 61, 75, 1461
AciI CCGC 7 cut(s) 15, 18, 24, 247, 497, 787, 1866
AclWI GGATC 2 cut(s) 737, 1943
AcoI YGGCCR 1 cut(s) 12
AcsI RAATTY 5 cut(s) 946, 1045, 1255, 1455, 1711
AcuI CTGAAG 4 cut(s) 380, 386, 866, 2064
AcvI CACGTG 1 cut(s) 938
AfaI GTAC 2 cut(s) 873, 1795
AfiI CCNNNNNNNGG 6 cut(s) 216, 415, 726, 1796, 1847, 1922
AflIII ACRYGT 1 cut(s) 1246
AgsI TTSAA 9 cut(s) 617, 629, 743, 776, 951, 957, 1074, 1454, 2067
AjnI CCWGG 4 cut(s) 500, 1162, 1204, 1789
AjuI GAANNNNNNNTTGG 4 cut(s) 1030, 1062, 1111, 1143
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 7 cut(s) 85, 287, 847, 1137, 1549, 1822, 1856
AlwI GGATC 2 cut(s) 737, 1943
AlwNI CAGNNNCTG 2 cut(s) 578, 1475
Ama87I CYCGRG 1 cut(s) 1499
AoxI GGCC 7 cut(s) 12, 139, 423, 498, 504, 514, 1029
ApaI GGGCCC 1 cut(s) 1033
ApeKI GCWGC 9 cut(s) 241, 244, 283, 383, 469, 941, 1718, 1948, 2033
ApoI RAATTY 5 cut(s) 946, 1045, 1255, 1455, 1711
AscI GGCGCGCC 1 cut(s) 73
AseI ATTAAT 1 cut(s) 1527
Asp700I GAANNNNTTC 2 cut(s) 624, 687
AspLEI GCGC 5 cut(s) 22, 24, 63, 75, 77
AspS9I GGNCC 6 cut(s) 226, 504, 514, 1029, 1030, 1124
AsuHPI GGTGA 3 cut(s) 724, 1183, 1539
AvaI CYCGRG 1 cut(s) 1499
AvaII GGWCC 2 cut(s) 226, 1124
BaeGI GKGCMC 1 cut(s) 1033
BanII GRGCYC 3 cut(s) 310, 589, 1033
BarI GAAGNNNNNNTAC 2 cut(s) 864, 896
BbrPI CACGTG 1 cut(s) 938
BbsI GAAGAC 1 cut(s) 1572
Bbv12I GWGCWC 1 cut(s) 310
BbvI GCAGC 9 cut(s) 253, 256, 295, 370, 456, 953, 1705, 1935, 2020
BccI CCATC 3 cut(s) 209, 1360, 1849
BceAI ACGGC 3 cut(s) 27, 62, 1713
BciT130I CCWGG 4 cut(s) 502, 1164, 1206, 1791
BclI TGATCA 2 cut(s) 1366, 1558
BcoDI GTCTC 7 cut(s) 85, 287, 847, 1137, 1549, 1822, 1856
BfaI CTAG 3 cut(s) 1110, 1874, 2018
BfmI CTRYAG 1 cut(s) 281
BfuAI ACCTGC 1 cut(s) 1279
BglI GCCNNNNNGGC 1 cut(s) 1957
BglII AGATCT 1 cut(s) 323
Bme1390I CCNGG 4 cut(s) 502, 1164, 1206, 1791
Bme18I GGWCC 2 cut(s) 226, 1124
BmeT110I CYCGRG 1 cut(s) 1499
BmgT120I GGNCC 6 cut(s) 226, 504, 514, 1029, 1030, 1124
BmiI GGNNCC 5 cut(s) 1030, 1031, 1212, 1236, 1311
BmrFI CCNGG 4 cut(s) 502, 1164, 1206, 1791
BpiI GAAGAC 1 cut(s) 1572
BpmI CTGGAG 1 cut(s) 143
Bpu10I CCTNAGC 1 cut(s) 1476
BpuEI CTTGAG 4 cut(s) 663, 908, 1538, 1637
Bsa29I ATCGAT 1 cut(s) 1668
BsaAI YACGTR 1 cut(s) 938
BsaI GGTCTC 2 cut(s) 1549, 1856
BsaJI CCNNGG 5 cut(s) 501, 1205, 1500, 1635, 1789
BsaXI ACNNNNNCTCC 2 cut(s) 1333, 1363
Bsc4I CCNNNNNNNGG 6 cut(s) 216, 415, 726, 1796, 1847, 1922
Bse118I RCCGGY 1 cut(s) 37
Bse1I ACTGG 4 cut(s) 182, 1180, 1828, 1991
Bse3DI GCAATG 1 cut(s) 1281
BseBI CCWGG 4 cut(s) 502, 1164, 1206, 1791
BseCI ATCGAT 1 cut(s) 1668
BseDI CCNNGG 5 cut(s) 501, 1205, 1500, 1635, 1789
BseGI GGATG 6 cut(s) 706, 757, 967, 1149, 1183, 1453
BseLI CCNNNNNNNGG 6 cut(s) 216, 415, 726, 1796, 1847, 1922
BseMI GCAATG 1 cut(s) 1281
BseMII CTCAG 7 cut(s) 68, 288, 318, 701, 1467, 1692, 1797
BseNI ACTGG 4 cut(s) 182, 1180, 1828, 1991
BsePI GCGCGC 2 cut(s) 20, 73
BseRI GAGGAG 1 cut(s) 131
BseSI GKGCMC 1 cut(s) 1033
BseX3I CGGCCG 1 cut(s) 12
BseXI GCAGC 9 cut(s) 253, 256, 295, 370, 456, 953, 1705, 1935, 2020
BseYI CCCAGC 1 cut(s) 588
BsgI GTGCAG 1 cut(s) 960
Bsh1236I CGCG 6 cut(s) 20, 22, 24, 61, 75, 1461
Bsh1285I CGRYCG 1 cut(s) 15
BshFI GGCC 7 cut(s) 14, 141, 425, 500, 506, 516, 1031
BshVI ATCGAT 1 cut(s) 1668
BsiEI CGRYCG 1 cut(s) 15
BsiHKAI GWGCWC 1 cut(s) 310
BsiHKCI CYCGRG 1 cut(s) 1499
BsiSI CCGG 1 cut(s) 38
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 6 cut(s) 216, 415, 726, 1796, 1847, 1922
BsmAI GTCTC 7 cut(s) 85, 287, 847, 1137, 1549, 1822, 1856
BsmBI CGTCTC 2 cut(s) 85, 1137
BsmFI GGGAC 1 cut(s) 232
BsnI GGCC 7 cut(s) 14, 141, 425, 500, 506, 516, 1031
Bso31I GGTCTC 2 cut(s) 1549, 1856
BsoBI CYCGRG 1 cut(s) 1499
Bsp120I GGGCCC 1 cut(s) 1029
Bsp1286I GDGCHC 3 cut(s) 310, 589, 1033
Bsp68I TCGCGA 1 cut(s) 1461
BspACI CCGC 7 cut(s) 15, 18, 24, 247, 497, 787, 1866
BspANI GGCC 7 cut(s) 14, 141, 425, 500, 506, 516, 1031
BspCNI CTCAG 7 cut(s) 67, 289, 319, 702, 1468, 1693, 1798
BspDI ATCGAT 1 cut(s) 1668
BspFNI CGCG 6 cut(s) 20, 22, 24, 61, 75, 1461
BspLI GGNNCC 5 cut(s) 1030, 1031, 1212, 1236, 1311
BspMAI CTGCAG 1 cut(s) 285
BspMI ACCTGC 1 cut(s) 1279
BspPI GGATC 2 cut(s) 737, 1943
BspQI GCTCTTC 2 cut(s) 1616, 1875
BspTNI GGTCTC 2 cut(s) 1549, 1856
BsrBI CCGCTC 1 cut(s) 1868
BsrDI GCAATG 1 cut(s) 1281
BsrFI RCCGGY 1 cut(s) 37
BsrI ACTGG 4 cut(s) 182, 1180, 1828, 1991
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 5 cut(s) 501, 1205, 1500, 1635, 1789
BssHII GCGCGC 2 cut(s) 20, 73
BssT1I CCWWGG 1 cut(s) 1635
Bst2UI CCWGG 4 cut(s) 502, 1164, 1206, 1791
Bst4CI ACNGT 4 cut(s) 837, 871, 1078, 1293
Bst6I CTCTTC 4 cut(s) 169, 550, 1616, 1875
BstBAI YACGTR 1 cut(s) 938
BstDEI CTNAG 9 cut(s) 54, 297, 302, 327, 521, 710, 1476, 1701, 1806
BstENI CCTNNNNNAGG 1 cut(s) 1794
BstF5I GGATG 6 cut(s) 706, 757, 967, 1149, 1183, 1453
BstFNI CGCG 6 cut(s) 20, 22, 24, 61, 75, 1461
BstHHI GCGC 5 cut(s) 22, 24, 63, 75, 77
BstMAI GTCTC 7 cut(s) 85, 287, 847, 1137, 1549, 1822, 1856
BstMCI CGRYCG 1 cut(s) 15
BstNI CCWGG 4 cut(s) 502, 1164, 1206, 1791
BstNSI RCATGY 3 cut(s) 377, 476, 1250
BstSCI CCNGG 4 cut(s) 500, 1162, 1204, 1789
BstSFI CTRYAG 1 cut(s) 281
BstSLI GKGCMC 1 cut(s) 1033
BstUI CGCG 6 cut(s) 20, 22, 24, 61, 75, 1461
BstV1I GCAGC 9 cut(s) 253, 256, 295, 370, 456, 953, 1705, 1935, 2020
BstV2I GAAGAC 1 cut(s) 1572
BstX2I RGATCY 1 cut(s) 323
BstYI RGATCY 1 cut(s) 323
BstZI CGGCCG 1 cut(s) 12
Bsu15I ATCGAT 1 cut(s) 1668
BsuRI GGCC 7 cut(s) 14, 141, 425, 500, 506, 516, 1031
BsuTUI ATCGAT 1 cut(s) 1668
BtgZI GCGATG 3 cut(s) 56, 126, 2072
BtsCI GGATG 6 cut(s) 706, 757, 967, 1149, 1183, 1453
BtsI GCAGTG 2 cut(s) 74, 1633
BtsIMutI CAGTG 6 cut(s) 74, 924, 1298, 1633, 1851, 1984
BtuMI TCGCGA 1 cut(s) 1461
BveI ACCTGC 1 cut(s) 1279
CaiI CAGNNNCTG 2 cut(s) 578, 1475
CfoI GCGC 5 cut(s) 22, 24, 63, 75, 77
Cfr10I RCCGGY 1 cut(s) 37
Cfr13I GGNCC 6 cut(s) 226, 504, 514, 1029, 1030, 1124
ClaI ATCGAT 1 cut(s) 1668
CseI GACGC 3 cut(s) 55, 67, 1954
Csp6I GTAC 2 cut(s) 872, 1794
CviQI GTAC 2 cut(s) 872, 1794
DdeI CTNAG 9 cut(s) 54, 297, 302, 327, 521, 710, 1476, 1701, 1806
EaeI YGGCCR 1 cut(s) 12
EagI CGGCCG 1 cut(s) 12
Eam1104I CTCTTC 4 cut(s) 169, 550, 1616, 1875
EarI CTCTTC 4 cut(s) 169, 550, 1616, 1875
Ecl136II GAGCTC 1 cut(s) 308
EclXI CGGCCG 1 cut(s) 12
Eco130I CCWWGG 1 cut(s) 1635
Eco24I GRGCYC 3 cut(s) 310, 589, 1033
Eco31I GGTCTC 2 cut(s) 1549, 1856
Eco32I GATATC 1 cut(s) 1488
Eco47I GGWCC 2 cut(s) 226, 1124
Eco52I CGGCCG 1 cut(s) 12
Eco53kI GAGCTC 1 cut(s) 308
Eco57I CTGAAG 4 cut(s) 380, 386, 866, 2064
Eco72I CACGTG 1 cut(s) 938
Eco88I CYCGRG 1 cut(s) 1499
EcoICRI GAGCTC 1 cut(s) 308
EcoNI CCTNNNNNAGG 1 cut(s) 1794
EcoO109I RGGNCCY 3 cut(s) 514, 1029, 1030
EcoRI GAATTC 1 cut(s) 1045
EcoRII CCWGG 4 cut(s) 500, 1162, 1204, 1789
EcoRV GATATC 1 cut(s) 1488
EcoT14I CCWWGG 1 cut(s) 1635
EcoT22I ATGCAT 5 cut(s) 867, 967, 1087, 1185, 2074
EcoT38I GRGCYC 3 cut(s) 310, 589, 1033
ErhI CCWWGG 1 cut(s) 1635
Esp3I CGTCTC 2 cut(s) 85, 1137
FalI AAGNNNNNCTT 4 cut(s) 501, 533, 904, 936
FaqI GGGAC 1 cut(s) 232
FauI CCCGC 1 cut(s) 780
FauNDI CATATG 2 cut(s) 288, 861
FbaI TGATCA 2 cut(s) 1366, 1558
FblI GTMKAC 1 cut(s) 192
FokI GGATG 6 cut(s) 713, 764, 974, 1156, 1170, 1460
FriOI GRGCYC 3 cut(s) 310, 589, 1033
FspBI CTAG 3 cut(s) 1110, 1874, 2018
GlaI GCGC 5 cut(s) 21, 23, 62, 74, 76
GsaI CCCAGC 1 cut(s) 592
GsuI CTGGAG 1 cut(s) 143
HaeIII GGCC 7 cut(s) 14, 141, 425, 500, 506, 516, 1031
HapII CCGG 1 cut(s) 38
HgaI GACGC 3 cut(s) 55, 67, 1954
HhaI GCGC 5 cut(s) 22, 24, 63, 75, 77
Hin6I GCGC 5 cut(s) 20, 22, 61, 73, 75
HinP1I GCGC 5 cut(s) 20, 22, 61, 73, 75
HincII GTYRAC 2 cut(s) 765, 1099
HindII GTYRAC 2 cut(s) 765, 1099
HindIII AAGCTT 2 cut(s) 392, 723
HinfI GANTC 5 cut(s) 932, 1520, 1595, 1610, 1808
HpaII CCGG 1 cut(s) 38
HphI GGTGA 3 cut(s) 724, 1183, 1539
Hpy166II GTNNAC 3 cut(s) 193, 765, 1099
Hpy8I GTNNAC 3 cut(s) 193, 765, 1099
Hpy99I CGWCG 1 cut(s) 1948
HpyAV CCTTC 4 cut(s) 361, 527, 1137, 1457
HpyCH4III ACNGT 4 cut(s) 837, 871, 1078, 1293
HpyCH4IV ACGT 3 cut(s) 937, 1010, 1056
HpyF3I CTNAG 9 cut(s) 54, 297, 302, 327, 521, 710, 1476, 1701, 1806
HpySE526I ACGT 3 cut(s) 937, 1010, 1056
HspAI GCGC 5 cut(s) 20, 22, 61, 73, 75
KroI GCCGGC 1 cut(s) 37
KroNI GCCGGC 1 cut(s) 39
Ksp22I TGATCA 2 cut(s) 1366, 1558
LguI GCTCTTC 2 cut(s) 1616, 1875
LmnI GCTCC 7 cut(s) 85, 118, 124, 370, 400, 418, 1315
Lsp1109I GCAGC 9 cut(s) 253, 256, 295, 370, 456, 953, 1705, 1935, 2020
MaeI CTAG 3 cut(s) 1110, 1874, 2018
MaeII ACGT 3 cut(s) 937, 1010, 1056
MaeIII GTNAC 3 cut(s) 563, 1171, 1535
MauBI CGCGCGCG 1 cut(s) 20
MbiI CCGCTC 1 cut(s) 1868
MfeI CAATTG 1 cut(s) 1119
MflI RGATCY 1 cut(s) 323
MhlI GDGCHC 3 cut(s) 310, 589, 1033
MlyI GAGTC 2 cut(s) 1529, 1817
MmeI TCCRAC 3 cut(s) 959, 1312, 1659
Mph1103I ATGCAT 5 cut(s) 867, 967, 1087, 1185, 2074
MroNI GCCGGC 1 cut(s) 37
MroXI GAANNNNTTC 2 cut(s) 624, 687
MseI TTAA 5 cut(s) 696, 1416, 1527, 1601, 1694
MslI CAYNNNNRTG 4 cut(s) 147, 378, 1833, 1989
MspA1I CMGCKG 2 cut(s) 247, 1919
MspI CCGG 1 cut(s) 38
MspR9I CCNGG 4 cut(s) 502, 1164, 1206, 1791
MunI CAATTG 1 cut(s) 1119
MvaI CCWGG 4 cut(s) 502, 1164, 1206, 1791
MvnI CGCG 6 cut(s) 20, 22, 24, 61, 75, 1461
NaeI GCCGGC 1 cut(s) 39
NdeI CATATG 2 cut(s) 288, 861
NgoMIV GCCGGC 1 cut(s) 37
NlaIV GGNNCC 5 cut(s) 1030, 1031, 1212, 1236, 1311
NmuCI GTSAC 2 cut(s) 563, 1171
NruI TCGCGA 1 cut(s) 1461
NsiI ATGCAT 5 cut(s) 867, 967, 1087, 1185, 2074
NspI RCATGY 3 cut(s) 377, 476, 1250
PaeI GCATGC 2 cut(s) 377, 476
PalAI GGCGCGCC 1 cut(s) 73
PauI GCGCGC 2 cut(s) 20, 73
PciI ACATGT 1 cut(s) 1246
PciSI GCTCTTC 2 cut(s) 1616, 1875
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 1949
PdiI GCCGGC 1 cut(s) 39
PdmI GAANNNNTTC 2 cut(s) 624, 687
PfeI GAWTC 3 cut(s) 932, 1595, 1610
PflMI CCANNNNNTGG 1 cut(s) 1922
PleI GAGTC 2 cut(s) 1528, 1816
PmaCI CACGTG 1 cut(s) 938
PmlI CACGTG 1 cut(s) 938
PpsI GAGTC 2 cut(s) 1528, 1816
Ppu21I YACGTR 1 cut(s) 938
PscI ACATGT 1 cut(s) 1246
PshBI ATTAAT 1 cut(s) 1527
Psp124BI GAGCTC 1 cut(s) 310
Psp6I CCWGG 4 cut(s) 500, 1162, 1204, 1789
PspCI CACGTG 1 cut(s) 938
PspFI CCCAGC 1 cut(s) 588
PspGI CCWGG 4 cut(s) 500, 1162, 1204, 1789
PspN4I GGNNCC 5 cut(s) 1030, 1031, 1212, 1236, 1311
PspOMI GGGCCC 1 cut(s) 1029
PspPI GGNCC 6 cut(s) 226, 504, 514, 1029, 1030, 1124
PstI CTGCAG 1 cut(s) 285
PstNI CAGNNNCTG 2 cut(s) 578, 1475
PsuI RGATCY 1 cut(s) 323
PteI GCGCGC 2 cut(s) 20, 73
PvuII CAGCTG 1 cut(s) 1919
RruI TCGCGA 1 cut(s) 1461
RsaI GTAC 2 cut(s) 873, 1795
RsaNI GTAC 2 cut(s) 872, 1794
RseI CAYNNNNRTG 4 cut(s) 147, 378, 1833, 1989
SacI GAGCTC 1 cut(s) 310
SapI GCTCTTC 2 cut(s) 1616, 1875
SaqAI TTAA 5 cut(s) 696, 1416, 1527, 1601, 1694
Sau96I GGNCC 6 cut(s) 226, 504, 514, 1029, 1030, 1124
SchI GAGTC 2 cut(s) 1529, 1817
ScrFI CCNGG 4 cut(s) 502, 1164, 1206, 1791
SduI GDGCHC 3 cut(s) 310, 589, 1033
SfcI CTRYAG 1 cut(s) 281
SgsI GGCGCGCC 1 cut(s) 73
SinI GGWCC 2 cut(s) 226, 1124
SmiMI CAYNNNNRTG 4 cut(s) 147, 378, 1833, 1989
SmlI CTYRAG 4 cut(s) 678, 887, 1517, 1616
SmoI CTYRAG 4 cut(s) 678, 887, 1517, 1616
SphI GCATGC 2 cut(s) 377, 476
SsiI CCGC 7 cut(s) 15, 18, 24, 247, 497, 787, 1866
SspMI CTAG 3 cut(s) 1110, 1874, 2018
SstI GAGCTC 1 cut(s) 310
StyD4I CCNGG 4 cut(s) 500, 1162, 1204, 1789
StyI CCWWGG 1 cut(s) 1635
TaaI ACNGT 4 cut(s) 837, 871, 1078, 1293
TaiI ACGT 3 cut(s) 940, 1013, 1059
TaqI TCGA 4 cut(s) 32, 203, 1668, 1943
TauI GCSGC 4 cut(s) 17, 20, 250, 500
TfiI GAWTC 3 cut(s) 932, 1595, 1610
Tru1I TTAA 5 cut(s) 696, 1416, 1527, 1601, 1694
Tru9I TTAA 5 cut(s) 696, 1416, 1527, 1601, 1694
TscAI CASTG 6 cut(s) 74, 931, 1298, 1633, 1851, 1991
TseFI GTSAC 2 cut(s) 563, 1171
TseI GCWGC 9 cut(s) 241, 244, 283, 383, 469, 941, 1718, 1948, 2033
Tsp45I GTSAC 2 cut(s) 563, 1171
TspGWI ACGGA 2 cut(s) 1302, 1698
TspRI CASTG 6 cut(s) 74, 931, 1298, 1633, 1851, 1991
Van91I CCANNNNNTGG 1 cut(s) 1922
VpaK11BI GGWCC 2 cut(s) 226, 1124
VspI ATTAAT 1 cut(s) 1527
XagI CCTNNNNNAGG 1 cut(s) 1794
XapI RAATTY 5 cut(s) 946, 1045, 1255, 1455, 1711
XbaI TCTAGA 1 cut(s) 1873
XceI RCATGY 3 cut(s) 377, 476, 1250
XcmI CCANNNNNNNNNTGG 1 cut(s) 433
XmiI GTMKAC 1 cut(s) 192
XmnI GAANNNNTTC 2 cut(s) 624, 687
XspI CTAG 3 cut(s) 1110, 1874, 2018
Zsp2I ATGCAT 5 cut(s) 867, 967, 1087, 1185, 2074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.