FvH4_1g14000

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
7722477 .. 7723919
1443 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14000.t1

Sequence Viewer

Length: 1443 bp
ATGGCGGAGATTAGCTCAAAACCACATGCCTTGCTGGTCCCAAGCCCCATGATGGGGCATCTCATCCCCTTGATGGAGCTCGCAAGCTCCCTAGTCACCCACCACAACTTCCACGTCACAGTCGTCGTCGTTTCACCCAACTCATCTCCTGAACTATCCAAGGTCATCCAATCCGCCAAGACCAAGAAGCTCTACGACATCGTTGAGCTCCCAGCACCCTCCTCCGGCCACGTCTCCAACATGGCCGGTGCGGTCTTCACGAACCTCGCCGCCCTCATGCTCGATGCCATATCATCTCTCCGGTCTGCAATCTCGGTCTTAGAAGTCAAACCCGCCGCAATGATCGTCGATATTTTCGGCACTCCAGCCCTCACTGTGGCAGAAGAATTCCATATGCTCAAGTATGTGATGGTAGCTTCCTGTGCTAGGCCATTGACTGTGCTTCTATATGCTCCAGTTTTAGACACACAGATACAAGGAGAGTATCTGGATTGTGAAGAGCTTCTGGAGATTCCGGGTTGCAAAGCGGTTCGACCTGAAGATGTGGCGAAGCCGATGATGAACAGGAAGGATAGGGAATACGGGGCTTACTTAAGAAAAGCGAATGATATTGCTTCAATGAGTGATGGGATCATGATCAACACATGGGAGGATCTGGAAGCTAAGTCTCTTAAGGCTATGAGAGAGCATCCAGAGTGGAACAAGATACTTAAGGTTCCGGTTTACACTATCGGACCTCTGTTTAGATCGGCAGGGCAGTCCAGTGGTGGTCCAACAACTCCGAGGAGTGAGTTGTTGGATTGGCTGGATAAGCAACCTAAGGAGTCTGTGCTTTACGTAGCGTTTGGGAGTATGGGGGTTCTTTCGGCTGAACAGATCATAGAGATGGCTTGGGGTTTGGAGCTTAGTAAGCAGAGGTTTATATGGGTGGTGCACCCACCAAGCAAGAGATCAGGTGATAAAGGGAATGACATATCGGAGTATTTACCTGAGGGGTTCATGGCTCGGACTCATGAAAGGGGTGTGGTGGTCACCGCTTGGGCTCCTCAGTCGGAAATCTTGGCTCATTCGTCGGTTGGAGGGACTCTATCGCACTGCGGGTGGAACTCATCGGTGGAGAGTATACTGAATGGTGTGCCGATGATCGCATGGCCGCTATATGCAGAGCAGACGATGATTGCAACACAGCTGGTGGAGGAGCTCAAGGTGGCGATTAAACCTAAAGAGTTGCCGACGAAAGCAGTAGCGGGGAGGGAGGAGATTGAGATGTTGGTGAAGAAGATTATGGAGCAGAAGGAAGGAGATGAAATGAGAGCAAGAGTCAAGGAATTGAAAGCAAGTGGGGAGAAAGCTCTGAGTAAGGAAGGGTCTTCTTTCAATATGCTCTCTGAATTGTCAAGGCTATGCAAGATCAATACCGAACAGCAAGGCCAGAAAGTTTGA

Protein Analysis

481

Amino Acids

52.76

Weight (kDa)

6.01

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 267 - 399 3.2e-17 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1123
AclWI GGATC 2 cut(s) 638, 660
AcoI YGGCCR 3 cut(s) 226, 243, 1151
AcsI RAATTY 1 cut(s) 386
AcuI CTGAAG 1 cut(s) 558
AfiI CCNNNNNNNGG 7 cut(s) 52, 53, 54, 73, 224, 376, 426
AflII CTTAAG 3 cut(s) 592, 671, 710
AgsI TTSAA 3 cut(s) 618, 1333, 1378
AjiI CACGTC 2 cut(s) 115, 232
Alw21I GWGCWC 4 cut(s) 81, 210, 936, 1203
Alw26I GTCTC 2 cut(s) 238, 672
Alw44I GTGCAC 1 cut(s) 932
AlwI GGATC 2 cut(s) 638, 660
AoxI GGCC 5 cut(s) 226, 243, 428, 1151, 1429
ApaLI GTGCAC 1 cut(s) 932
ApoI RAATTY 1 cut(s) 386
Asp700I GAANNNNTTC 1 cut(s) 501
AspS9I GGNCC 3 cut(s) 37, 734, 770
AsuC2I CCSGG 1 cut(s) 516
AsuHPI GGTGA 5 cut(s) 88, 126, 968, 1024, 1285
AvaII GGWCC 3 cut(s) 37, 734, 770
AxyI CCTNAGG 2 cut(s) 819, 990
BaeGI GKGCMC 1 cut(s) 936
BanII GRGCYC 4 cut(s) 81, 210, 1045, 1203
BbsI GAAGAC 2 cut(s) 247, 1362
Bbv12I GWGCWC 4 cut(s) 81, 210, 936, 1203
BccI CCATC 5 cut(s) 46, 67, 403, 620, 880
BclI TGATCA 1 cut(s) 636
BcnI CCSGG 1 cut(s) 516
BcoDI GTCTC 2 cut(s) 238, 672
BfaI CTAG 2 cut(s) 92, 426
BfrI CTTAAG 3 cut(s) 592, 671, 710
BisI GCNGC 3 cut(s) 270, 336, 1154
BlsI GCNGC 3 cut(s) 271, 337, 1155
Bme1390I CCNGG 1 cut(s) 516
Bme18I GGWCC 3 cut(s) 37, 734, 770
BmgBI CACGTC 2 cut(s) 115, 232
BmgT120I GGNCC 3 cut(s) 37, 734, 770
BmiI GGNNCC 3 cut(s) 39, 717, 1044
BmrFI CCNGG 1 cut(s) 516
BmsI GCATC 3 cut(s) 67, 274, 697
BpiI GAAGAC 2 cut(s) 247, 1362
BplI GAGNNNNNCTC 1 cut(s) 31
BpmI CTGGAG 3 cut(s) 348, 438, 527
BpuEI CTTGAG 2 cut(s) 383, 1187
BpuMI CCSGG 1 cut(s) 516
BsaAI YACGTR 1 cut(s) 838
BsaBI GATNNNNATC 1 cut(s) 635
BsaJI CCNNGG 2 cut(s) 159, 782
BsaWI WCCGGW 2 cut(s) 300, 718
Bsc4I CCNNNNNNNGG 7 cut(s) 52, 53, 54, 73, 224, 376, 426
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 2 cut(s) 455, 762
Bse21I CCTNAGG 2 cut(s) 819, 990
Bse3DI GCAATG 1 cut(s) 345
Bse8I GATNNNNATC 1 cut(s) 635
BseDI CCNNGG 2 cut(s) 159, 782
BseGI GGATG 3 cut(s) 63, 165, 688
BseJI GATNNNNATC 1 cut(s) 635
BseLI CCNNNNNNNGG 7 cut(s) 52, 53, 54, 73, 224, 376, 426
BseMI GCAATG 1 cut(s) 345
BseMII CTCAG 3 cut(s) 981, 1061, 1346
BseNI ACTGG 2 cut(s) 455, 762
BseRI GAGGAG 5 cut(s) 211, 799, 1035, 1211, 1271
BseSI GKGCMC 1 cut(s) 936
BseYI CCCAGC 1 cut(s) 211
BshFI GGCC 5 cut(s) 228, 245, 430, 1153, 1431
BsiHKAI GWGCWC 4 cut(s) 81, 210, 936, 1203
BsiSI CCGG 5 cut(s) 225, 246, 301, 515, 719
BslFI GGGAC 2 cut(s) 23, 1096
BslI CCNNNNNNNGG 7 cut(s) 52, 53, 54, 73, 224, 376, 426
BsmAI GTCTC 2 cut(s) 238, 672
BsmBI CGTCTC 1 cut(s) 238
BsmFI GGGAC 2 cut(s) 23, 1096
BsnI GGCC 5 cut(s) 228, 245, 430, 1153, 1431
Bsp1286I GDGCHC 5 cut(s) 81, 210, 936, 1045, 1203
Bsp143I GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
BspANI GGCC 5 cut(s) 228, 245, 430, 1153, 1431
BspCNI CTCAG 3 cut(s) 982, 1060, 1347
BspHI TCATGA 2 cut(s) 633, 1012
BspLI GGNNCC 3 cut(s) 39, 717, 1044
BspPI GGATC 2 cut(s) 638, 660
BspQI GCTCTTC 1 cut(s) 492
BspTI CTTAAG 3 cut(s) 592, 671, 710
BsrDI GCAATG 1 cut(s) 345
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 2 cut(s) 455, 762
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 2 cut(s) 159, 782
BssMI GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
BssNAI GTATAC 1 cut(s) 1124
BssT1I CCWWGG 1 cut(s) 159
Bst1107I GTATAC 1 cut(s) 1124
Bst4CI ACNGT 3 cut(s) 121, 376, 439
Bst6I CTCTTC 1 cut(s) 492
BstAFI CTTAAG 3 cut(s) 592, 671, 710
BstBAI YACGTR 1 cut(s) 838
BstC8I GCNNGC 2 cut(s) 81, 85
BstDEI CTNAG 7 cut(s) 319, 663, 819, 905, 990, 1047, 1355
BstEII GGTNACC 1 cut(s) 1030
BstENI CCTNNNNNAGG 1 cut(s) 424
BstF5I GGATG 3 cut(s) 63, 165, 688
BstKTI GATC 9 cut(s) 345, 633, 639, 655, 749, 879, 953, 1146, 1413
BstMAI GTCTC 2 cut(s) 238, 672
BstMBI GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
BstMWI GCNNNNNNNGC 3 cut(s) 422, 811, 910
BstNSI RCATGY 1 cut(s) 29
BstPI GGTNACC 1 cut(s) 1030
BstSCI CCNGG 1 cut(s) 514
BstSLI GKGCMC 1 cut(s) 936
BstSNI TACGTA 1 cut(s) 838
BstV2I GAAGAC 2 cut(s) 247, 1362
BstX2I RGATCY 1 cut(s) 652
BstYI RGATCY 1 cut(s) 652
BstZ17I GTATAC 1 cut(s) 1124
Bsu36I CCTNAGG 2 cut(s) 819, 990
BsuRI GGCC 5 cut(s) 228, 245, 430, 1153, 1431
BtrI CACGTC 2 cut(s) 115, 232
BtsCI GGATG 3 cut(s) 63, 165, 688
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 3 cut(s) 372, 769, 1093
Cac8I GCNNGC 2 cut(s) 81, 85
CciI TCATGA 2 cut(s) 633, 1012
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 3 cut(s) 37, 734, 770
CspCI CAANNNNNGTGG 2 cut(s) 12, 47
CviAII CATG 9 cut(s) 26, 49, 241, 277, 634, 645, 1000, 1013, 1149
DdeI CTNAG 7 cut(s) 319, 663, 819, 905, 990, 1047, 1355
DpnI GATC 9 cut(s) 344, 632, 638, 654, 748, 878, 952, 1145, 1412
DpnII GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
EaeI YGGCCR 3 cut(s) 226, 243, 1151
Eam1104I CTCTTC 1 cut(s) 492
EarI CTCTTC 1 cut(s) 492
EciI GGCGGA 2 cut(s) 20, 163
Ecl136II GAGCTC 3 cut(s) 79, 208, 1201
Eco105I TACGTA 1 cut(s) 838
Eco130I CCWWGG 1 cut(s) 159
Eco24I GRGCYC 4 cut(s) 81, 210, 1045, 1203
Eco47I GGWCC 3 cut(s) 37, 734, 770
Eco53kI GAGCTC 3 cut(s) 79, 208, 1201
Eco57I CTGAAG 1 cut(s) 558
Eco81I CCTNAGG 2 cut(s) 819, 990
Eco91I GGTNACC 1 cut(s) 1030
EcoICRI GAGCTC 3 cut(s) 79, 208, 1201
EcoNI CCTNNNNNAGG 1 cut(s) 424
EcoO65I GGTNACC 1 cut(s) 1030
EcoRI GAATTC 1 cut(s) 386
EcoT14I CCWWGG 1 cut(s) 159
EcoT38I GRGCYC 4 cut(s) 81, 210, 1045, 1203
ErhI CCWWGG 1 cut(s) 159
Esp3I CGTCTC 1 cut(s) 238
FaeI CATG 9 cut(s) 29, 52, 244, 280, 637, 648, 1003, 1016, 1152
FaqI GGGAC 2 cut(s) 23, 1096
FatI CATG 9 cut(s) 25, 48, 240, 276, 633, 644, 999, 1012, 1148
FauI CCCGC 3 cut(s) 340, 1091, 1240
FauNDI CATATG 1 cut(s) 393
FbaI TGATCA 1 cut(s) 636
FblI GTMKAC 1 cut(s) 1123
Fnu4HI GCNGC 3 cut(s) 270, 336, 1154
FokI GGATG 3 cut(s) 50, 152, 675
FriOI GRGCYC 4 cut(s) 81, 210, 1045, 1203
Fsp4HI GCNGC 3 cut(s) 270, 336, 1154
FspBI CTAG 2 cut(s) 92, 426
GluI GCNGC 3 cut(s) 270, 336, 1154
GsaI CCCAGC 1 cut(s) 215
GsuI CTGGAG 3 cut(s) 348, 438, 527
HaeIII GGCC 5 cut(s) 228, 245, 430, 1153, 1431
HapII CCGG 5 cut(s) 225, 246, 301, 515, 719
Hin1II CATG 9 cut(s) 29, 52, 244, 280, 637, 648, 1003, 1016, 1152
HinfI GANTC 5 cut(s) 511, 824, 1009, 1084, 1320
HpaII CCGG 5 cut(s) 225, 246, 301, 515, 719
HphI GGTGA 5 cut(s) 88, 126, 968, 1024, 1285
Hpy166II GTNNAC 3 cut(s) 724, 934, 1124
Hpy188I TCNGA 7 cut(s) 734, 783, 979, 1008, 1054, 1356, 1390
Hpy188III TCNNGA 8 cut(s) 149, 259, 488, 506, 634, 656, 692, 1013
Hpy8I GTNNAC 3 cut(s) 724, 934, 1124
Hpy99I CGWCG 5 cut(s) 128, 131, 350, 1075, 1237
HpyAV CCTTC 4 cut(s) 562, 1288, 1292, 1358
HpyCH4III ACNGT 3 cut(s) 121, 376, 439
HpyCH4IV ACGT 3 cut(s) 114, 231, 837
HpyCH4V TGCA 6 cut(s) 308, 522, 934, 1163, 1181, 1407
HpyF10VI GCNNNNNNNGC 3 cut(s) 422, 811, 910
HpyF3I CTNAG 7 cut(s) 319, 663, 819, 905, 990, 1047, 1355
HpySE526I ACGT 3 cut(s) 114, 231, 837
Hsp92II CATG 9 cut(s) 29, 52, 244, 280, 637, 648, 1003, 1016, 1152
Ksp22I TGATCA 1 cut(s) 636
Kzo9I GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 8 cut(s) 76, 92, 213, 457, 901, 1048, 1198, 1288
LweI GCATC 3 cut(s) 67, 274, 697
MaeI CTAG 2 cut(s) 92, 426
MaeII ACGT 3 cut(s) 114, 231, 837
MaeIII GTNAC 3 cut(s) 94, 115, 1030
MalI GATC 9 cut(s) 344, 632, 638, 654, 748, 878, 952, 1145, 1412
MboI GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
MboII GAAGA 7 cut(s) 247, 395, 509, 551, 1288, 1291, 1362
MflI RGATCY 1 cut(s) 652
MhlI GDGCHC 5 cut(s) 81, 210, 936, 1045, 1203
MluCI AATT 3 cut(s) 386, 1328, 1391
MlyI GAGTC 4 cut(s) 833, 1003, 1078, 1329
MmeI TCCRAC 5 cut(s) 261, 777, 797, 1032, 1057
MroXI GAANNNNTTC 1 cut(s) 501
MseI TTAA 4 cut(s) 593, 672, 711, 1215
MslI CAYNNNNRTG 1 cut(s) 884
MspA1I CMGCKG 1 cut(s) 1189
MspCI CTTAAG 3 cut(s) 592, 671, 710
MspI CCGG 5 cut(s) 225, 246, 301, 515, 719
MspR9I CCNGG 1 cut(s) 516
MwoI GCNNNNNNNGC 3 cut(s) 422, 811, 910
NciI CCSGG 1 cut(s) 516
NdeI CATATG 1 cut(s) 393
NdeII GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
NlaIII CATG 9 cut(s) 29, 52, 244, 280, 637, 648, 1003, 1016, 1152
NlaIV GGNNCC 3 cut(s) 39, 717, 1044
NmuCI GTSAC 3 cut(s) 94, 115, 1030
NspI RCATGY 1 cut(s) 29
PagI TCATGA 2 cut(s) 633, 1012
PciSI GCTCTTC 1 cut(s) 492
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PdmI GAANNNNTTC 1 cut(s) 501
PfeI GAWTC 1 cut(s) 511
PkrI GCNGC 3 cut(s) 271, 337, 1155
PleI GAGTC 4 cut(s) 832, 1003, 1078, 1328
PpsI GAGTC 4 cut(s) 832, 1003, 1078, 1328
Ppu21I YACGTR 1 cut(s) 838
Psp124BI GAGCTC 3 cut(s) 81, 210, 1203
PspEI GGTNACC 1 cut(s) 1030
PspFI CCCAGC 1 cut(s) 211
PspN4I GGNNCC 3 cut(s) 39, 717, 1044
PspPI GGNCC 3 cut(s) 37, 734, 770
PsuI RGATCY 1 cut(s) 652
PvuII CAGCTG 1 cut(s) 1189
RseI CAYNNNNRTG 1 cut(s) 884
SacI GAGCTC 3 cut(s) 81, 210, 1203
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 4 cut(s) 593, 672, 711, 1215
SatI GCNGC 3 cut(s) 270, 336, 1154
Sau3AI GATC 9 cut(s) 342, 630, 636, 652, 746, 876, 950, 1143, 1410
Sau96I GGNCC 3 cut(s) 37, 734, 770
SchI GAGTC 4 cut(s) 833, 1003, 1078, 1329
ScrFI CCNGG 1 cut(s) 516
SduI GDGCHC 5 cut(s) 81, 210, 936, 1045, 1203
SfaNI GCATC 3 cut(s) 67, 274, 697
SinI GGWCC 3 cut(s) 37, 734, 770
SmiMI CAYNNNNRTG 1 cut(s) 884
SmlI CTYRAG 5 cut(s) 398, 592, 671, 710, 1202
SmoI CTYRAG 5 cut(s) 398, 592, 671, 710, 1202
SnaBI TACGTA 1 cut(s) 838
Sse9I AATT 3 cut(s) 386, 1328, 1391
SspMI CTAG 2 cut(s) 92, 426
SstI GAGCTC 3 cut(s) 81, 210, 1203
StyD4I CCNGG 1 cut(s) 514
StyI CCWWGG 1 cut(s) 159
TaaI ACNGT 3 cut(s) 121, 376, 439
TaiI ACGT 3 cut(s) 117, 234, 840
TaqI TCGA 3 cut(s) 282, 348, 532
TaqII GACCGA 1 cut(s) 304
TasI AATT 3 cut(s) 386, 1328, 1391
TauI GCSGC 3 cut(s) 272, 338, 1156
TfiI GAWTC 1 cut(s) 511
Tru1I TTAA 4 cut(s) 593, 672, 711, 1215
Tru9I TTAA 4 cut(s) 593, 672, 711, 1215
TscAI CASTG 3 cut(s) 379, 769, 1100
TseFI GTSAC 3 cut(s) 94, 115, 1030
Tsp45I GTSAC 3 cut(s) 94, 115, 1030
TspDTI ATGAA 4 cut(s) 575, 988, 1029, 1320
TspRI CASTG 3 cut(s) 379, 769, 1100
Vha464I CTTAAG 3 cut(s) 592, 671, 710
VneI GTGCAC 1 cut(s) 932
VpaK11BI GGWCC 3 cut(s) 37, 734, 770
XagI CCTNNNNNAGG 1 cut(s) 424
XapI RAATTY 1 cut(s) 386
XceI RCATGY 1 cut(s) 29
XmiI GTMKAC 1 cut(s) 1123
XmnI GAANNNNTTC 1 cut(s) 501
XspI CTAG 2 cut(s) 92, 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.