Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0003264

Physical Location & Seq

Genomic Coordinates Reverse (-)

16758724 .. 16765637

Gene Structure 6914 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027915

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGACTTCCATGGAGGACATGAGCTCAAAAGCATTTGTGCTGCTAGTACCCAGCCCCGGCATGGGACACCTCATCCCCTTCTTGGAGCTCGCCAACTGCCTCGTCGAGCATCACAATTTCCACGCCACAGTCGTCGTCATTTCATCCAACACTTCTCCTGCACAATCCCAGGTCATCCAATCCGCCATGACCCCGAAACTTTTCGACATCATTGAGCTTCCACCACTAGACACCTCCGGCCAAGTCAACGCCGCTGGTTCAGTCTTCACACAGCTCCCGGCCATTATGCTTGATGCCCGGTCCTCTCTCCGGTCCTCCATCTCGGCCATGGAGTTCAAGCCGGTAGCCATGATCGTCGATCTTTTCGGCACCGCTGTTCTTCCCGTGGCCGATGAGTTCCACATGCTCAAGTATGTAAGAGTCTCGTGTGCTTGGCCCCTTGCCCTGCTTTTATACGCTCCCATTCTAGATAAGGAGGTGGAAGGAGAATACTTGGATCAAAAAGAACCGCTCAAGATCCCGGGTTGCAAGCCTGTTCGACCGGAAGATGTTGTTAAGCCCATGATGAACAGAAAAGAACCCGAATACGAGTCCTTCATACGTATTGGGATAGAGTTAGGCGAGATGAGTGATGGTATTTTGGTCAACACTTGGGAAGATCTGGAGTCAATGAGTCTTAGACCCATGAGAGAGGATCCAGAGTGGAAGCAGATACTTAAGGTTCCGGTCCATACTTTCGGTCCCATGATTAGGCCGGCAGGGCGCTCCACTCCGAGGAGCGAGGTGTTGGGTTGGCTGGACATGCAGCCCAATGCCTCTATGATTTACATTTCTTTTGGGAGCGGTGGGGTTCTGTCGGCTGATCAAATTACCGAGATGGCTTGGGGTATAGAGCTCAGCGCTCAAACATTTATATGGGTAGTGCATCCACCAAGCAAAGATGGTGACAAAGGCGATGACATTTCAGACTACTTGCCTGAAGGGTTCATGGCTCGGACTCGTGACAAGGGTCTAGTGGTCACCACTTGGGCTCCTCAGGTGGAAATCTTGGCTCATTCATCAGTCGGAGGGTTCTTGTCACACTGTGGTTGGAACTCGTCGCTGGAGAGTATACTGAATGCTGTGCCAATGATCGCATGGCCACTCTATGCCGAGCAGAAAATGATTGCTACGTTTTTCGTGGAGGAGCTGAAGGTGGCGATTCGACCTAAAGTTCTGCCGGCAAAGAAAATAGTAAGGAGGGAGGAGATTGAGATGATGGTGAGGAAGATTGTGGAGGAGAAAGAAGGAGATGAAATGAGGGCAAGAGCTAAAGAGCTAAAAAAGAGTGGGGAAGCAGCCTTGAGTGAAGGTGGGTCTTCATTCAAGACACTCTCTGCATTGGCAAAGCTCTGCCAGCACAACTCGCAACATCAGAAAGTTGCAGCAGCTTATAAATATTCAAAATTCTTCAACTTCTTAAGAAACCTTGAAACTTCAATAATAGGAAACATAAACACAAATTTGAAGGGATTCAGACAATTTGGCCCCTCCTCCAGCCATAGGGGACAATGCAAATTTAATTGCAGCATGGCCCCTCATCCTTCAGTTCCCGAGCAAAGAGAAGAGGATCATATGATGGAAAATCTTTTAGTTCAAATGGAACAGAACTTGGTTCCTCTGGTTAATGAGGATGGTATTCGTCATTTCGGAATTGACATTGAGGAGAACTGGGATAAGGTTAAGACCATATTTGTCCCAACGGGAGCTTCCCTTTCACCAGATGTATCTGCTCCACTTGTTGCGACCCTTCCCTTGGAGTGTGCAACTTCTGATCCTGATGACCGTAAGAGAGCCCTTGTAATTAGAGGAGGAATTGCTAACTTCACTGATGTAGCTACAACATTCAATGGTATTATTAGAGCCTTGAAGGAGAGGGTGATCAGCAAAATCTACTTTGCTAAACCCCAATTTTGTCTGTGTTTTGTTACCATCTTTTCTAAGTGCAAAACTGACAATGCCATATTTGATCAATCAGGAAACAAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 map00940

Pfam Domains

Protein Families

UDPGT

Protein Analysis

677

Amino Acids

75.12

Weight (kDa)

5.78

Isoelectric Point (pI)

43.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	272 - 391	6.9e-16	UDP-glucoronosyl and UDP-glucosyl transferase
Citrate_bind	PF16114	599 - 639	1.1e-09	ATP citrate lyase citrate-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003264)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g13970 FvH4_1g13990 FvH4_1g14000
rosa_chinensis	RchiOBHm_Chr2g0102291 RchiOBHm_Chr5g0049051
rosa_laevigata	RLG00000017143 RLG00000027915 RLG00000029969 RLG00000034587
rosa_multiflora	Rmu_co8035894.1_g000001 Rmu_sc0000530.1_g000029 Rmu_sc0005055.1_g000021 Rmu_sc0008757.1_g000011 Rmu_sc0030874.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032820 Rroxscaffold_2G00140590 Rroxscaffold_2G00140600 Rroxscaffold_4G00297540 Rroxscaffold_4G00322380
rosa_rugosa	Rorug01G0070700 Rorug01G0070800 Rorug01G0266200 Rorug01G0266200 Rorug02G0106200 Rorug05G0242800
rosa_samantha	Rh1AG279800 Rh1BG069800 Rh1CG263900 Rh1DG091500 Rh2BG160200 Rh2BG160300 Rh2CG159800 Rh5AG322500 Rh5BG332800 Rh5CG357900
rosa_wichuraiana	Rw1G024870 Rw5G030430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1434
AccB1I	GGYRCC	1 cut(s)	368
AccBSI	CCGCTC	2 cut(s)	511, 843
AccI	GTMKAC	1 cut(s)	1111
AciI	CCGC	5 cut(s)	183, 252, 372, 509, 843
AclWI	GGATC	6 cut(s)	504, 511, 689, 702, 1617, 1808
AcoI	YGGCCR	5 cut(s)	238, 279, 324, 387, 1139
AcsI	RAATTY	3 cut(s)	1445, 1501, 1556
AcuI	CTGAAG	3 cut(s)	999, 1211, 1569
AdeI	CACNNNGTG	1 cut(s)	1085
AfaI	GTAC	1 cut(s)	48
AfeI	AGCGCT	1 cut(s)	901
AfiI	CCNNNNNNNGG	9 cut(s)	56, 61, 62, 82, 309, 750, 774, 1542, 1795
AflII	CTTAAG	2 cut(s)	716, 1459
AjnI	CCWGG	1 cut(s)	168
AjuI	GAANNNNNNNTTGG	2 cut(s)	1732, 1764
Alw21I	GWGCWC	3 cut(s)	26, 90, 897
Alw26I	GTCTC	1 cut(s)	427
AlwI	GGATC	6 cut(s)	504, 511, 689, 702, 1617, 1808
Ama87I	CYCGRG	2 cut(s)	520, 1592
Aor51HI	AGCGCT	1 cut(s)	901
AoxI	GGCC	9 cut(s)	238, 279, 324, 387, 434, 752, 1139, 1525, 1572
ApeKI	GCWGC	6 cut(s)	40, 805, 1337, 1424, 1427, 1566
ApoI	RAATTY	3 cut(s)	1445, 1501, 1556
Asp700I	GAANNNNTTC	2 cut(s)	200, 1511
AspLEI	GCGC	2 cut(s)	765, 902
AspS9I	GGNCC	7 cut(s)	300, 312, 435, 727, 740, 1526, 1573
AsuC2I	CCSGG	5 cut(s)	57, 278, 298, 521, 522
AsuHPI	GGTGA	5 cut(s)	956, 1012, 1273, 1749, 1930
AvaI	CYCGRG	2 cut(s)	520, 1592
AvaII	GGWCC	4 cut(s)	300, 312, 727, 740
AxyI	CCTNAGG	1 cut(s)	1035
BalI	TGGCCA	1 cut(s)	1141
BamHI	GGATCC	1 cut(s)	694
BanI	GGYRCC	1 cut(s)	368
BanII	GRGCYC	5 cut(s)	26, 90, 897, 1033, 1837
BauI	CACGAG	2 cut(s)	424, 999
BbsI	GAAGAC	2 cut(s)	256, 1350
Bbv12I	GWGCWC	3 cut(s)	26, 90, 897
BbvI	GCAGC	6 cut(s)	27, 817, 1349, 1436, 1439, 1578
BccI	CCATC	8 cut(s)	326, 626, 871, 935, 1252, 1612, 1667, 1979
BciT130I	CCWGG	1 cut(s)	170
BclI	TGATCA	3 cut(s)	862, 1920, 2008
BcnI	CCSGG	5 cut(s)	57, 278, 298, 521, 522
BcoDI	GTCTC	1 cut(s)	427
BfaI	CTAG	4 cut(s)	44, 227, 467, 1013
BfoI	RGCGCY	2 cut(s)	766, 903
BfrI	CTTAAG	2 cut(s)	716, 1459
BglI	GCCNNNNNGGC	1 cut(s)	760
BglII	AGATCT	1 cut(s)	658
BisI	GCNGC	7 cut(s)	41, 252, 806, 1338, 1425, 1428, 1567
BlpI	GCTNAGC	1 cut(s)	896
BlsI	GCNGC	7 cut(s)	42, 253, 807, 1339, 1426, 1429, 1568
Bme1390I	CCNGG	6 cut(s)	57, 170, 278, 298, 521, 522
Bme18I	GGWCC	4 cut(s)	300, 312, 727, 740
BmeT110I	CYCGRG	2 cut(s)	520, 1592
BmgT120I	GGNCC	7 cut(s)	300, 312, 435, 727, 740, 1526, 1573
BmiI	GGNNCC	9 cut(s)	370, 437, 696, 723, 742, 1032, 1528, 1575, 1656
BmrFI	CCNGG	6 cut(s)	57, 170, 278, 298, 521, 522
BmrI	ACTGGG	1 cut(s)	1720
BmsI	GCATC	3 cut(s)	118, 283, 934
BmuI	ACTGGG	1 cut(s)	1720
BoxI	GACNNNNGTC	1 cut(s)	1008
BpiI	GAAGAC	2 cut(s)	256, 1350
BpmI	CTGGAG	3 cut(s)	683, 1124, 1519
Bpu1102I	GCTNAGC	1 cut(s)	896
BpuEI	CTTGAG	3 cut(s)	392, 497, 1363
BpuMI	CCSGG	5 cut(s)	57, 278, 298, 521, 522
BsaAI	YACGTR	1 cut(s)	602
BsaJI	CCNNGG	8 cut(s)	9, 55, 168, 327, 384, 520, 773, 1794
BsaWI	WCCGGW	3 cut(s)	309, 541, 724
BsaXI	ACNNNNNCTCC	2 cut(s)	1015, 1045
Bsc4I	CCNNNNNNNGG	9 cut(s)	56, 61, 62, 82, 309, 750, 774, 1542, 1795
Bse118I	RCCGGY	3 cut(s)	340, 754, 1219
Bse1I	ACTGG	1 cut(s)	1715
Bse21I	CCTNAGG	1 cut(s)	1035
BseBI	CCWGG	1 cut(s)	170
BseDI	CCNNGG	8 cut(s)	9, 55, 168, 327, 384, 520, 773, 1794
BseGI	GGATG	6 cut(s)	72, 143, 174, 925, 1579, 1678
BseLI	CCNNNNNNNGG	9 cut(s)	56, 61, 62, 82, 309, 750, 774, 1542, 1795
BseMII	CTCAG	2 cut(s)	910, 1049
BseNI	ACTGG	1 cut(s)	1715
BseRI	GAGGAG	8 cut(s)	790, 1023, 1199, 1259, 1292, 1522, 1718, 1863
BseXI	GCAGC	6 cut(s)	27, 817, 1349, 1436, 1439, 1578
BseYI	CCCAGC	1 cut(s)	50
BsgI	GTGCAG	1 cut(s)	144
Bsh1285I	CGRYCG	1 cut(s)	542
BshFI	GGCC	9 cut(s)	240, 281, 326, 389, 436, 754, 1141, 1527, 1574
BshNI	GGYRCC	1 cut(s)	368
BsiEI	CGRYCG	1 cut(s)	542
BsiHKAI	GWGCWC	3 cut(s)	26, 90, 897
BsiHKCI	CYCGRG	2 cut(s)	520, 1592
BslFI	GGGAC	4 cut(s)	78, 726, 1560, 1721
BslI	CCNNNNNNNGG	9 cut(s)	56, 61, 62, 82, 309, 750, 774, 1542, 1795
BsmAI	GTCTC	1 cut(s)	427
BsmFI	GGGAC	4 cut(s)	78, 726, 1560, 1721
BsmI	GAATGC	1 cut(s)	1123
BsnI	GGCC	9 cut(s)	240, 281, 326, 389, 436, 754, 1141, 1527, 1574
BsoBI	CYCGRG	2 cut(s)	520, 1592
Bsp1286I	GDGCHC	5 cut(s)	26, 90, 897, 1033, 1837
Bsp1720I	GCTNAGC	1 cut(s)	896
Bsp19I	CCATGG	2 cut(s)	9, 327
BspACI	CCGC	5 cut(s)	183, 252, 372, 509, 843
BspANI	GGCC	9 cut(s)	240, 281, 326, 389, 436, 754, 1141, 1527, 1574
BspCNI	CTCAG	2 cut(s)	909, 1048
BspLI	GGNNCC	9 cut(s)	370, 437, 696, 723, 742, 1032, 1528, 1575, 1656
BspPI	GGATC	6 cut(s)	504, 511, 689, 702, 1617, 1808
BspT107I	GGYRCC	1 cut(s)	368
BspTI	CTTAAG	2 cut(s)	716, 1459
BsrBI	CCGCTC	2 cut(s)	511, 843
BsrFI	RCCGGY	3 cut(s)	340, 754, 1219
BsrI	ACTGG	1 cut(s)	1715
BssAI	RCCGGY	3 cut(s)	340, 754, 1219
BssECI	CCNNGG	8 cut(s)	9, 55, 168, 327, 384, 520, 773, 1794
BssNAI	GTATAC	1 cut(s)	1112
BssSI	CACGAG	2 cut(s)	424, 999
BssT1I	CCWWGG	3 cut(s)	9, 327, 1794
Bst1107I	GTATAC	1 cut(s)	1112
Bst2BI	CACGAG	2 cut(s)	424, 999
Bst2UI	CCWGG	1 cut(s)	170
Bst4CI	ACNGT	3 cut(s)	130, 1085, 1826
Bst6I	CTCTTC	1 cut(s)	1599
BstAFI	CTTAAG	2 cut(s)	716, 1459
BstBAI	YACGTR	1 cut(s)	602
BstC8I	GCNNGC	5 cut(s)	90, 530, 756, 1221, 1397
BstDEI	CTNAG	4 cut(s)	677, 896, 1035, 1980
BstDSI	CCRYGG	3 cut(s)	9, 327, 384
BstEII	GGTNACC	1 cut(s)	1018
BstF5I	GGATG	6 cut(s)	72, 143, 174, 925, 1579, 1678
BstH2I	RGCGCY	2 cut(s)	766, 903
BstHHI	GCGC	2 cut(s)	765, 902
BstMAI	GTCTC	1 cut(s)	427
BstMCI	CGRYCG	1 cut(s)	542
BstMWI	GCNNNNNNNGC	4 cut(s)	760, 802, 1396, 1405
BstNI	CCWGG	1 cut(s)	170
BstNSI	RCATGY	2 cut(s)	406, 805
BstPAI	GACNNNNGTC	1 cut(s)	1008
BstPI	GGTNACC	1 cut(s)	1018
BstSCI	CCNGG	6 cut(s)	55, 168, 276, 296, 519, 520
BstSNI	TACGTA	1 cut(s)	602
BstV1I	GCAGC	6 cut(s)	27, 817, 1349, 1436, 1439, 1578
BstV2I	GAAGAC	2 cut(s)	256, 1350
BstX2I	RGATCY	3 cut(s)	516, 658, 694
BstYI	RGATCY	3 cut(s)	516, 658, 694
BstZ17I	GTATAC	1 cut(s)	1112
Bsu36I	CCTNAGG	1 cut(s)	1035
BsuRI	GGCC	9 cut(s)	240, 281, 326, 389, 436, 754, 1141, 1527, 1574
BtgI	CCRYGG	3 cut(s)	9, 327, 384
BtgZI	GCGATG	1 cut(s)	969
BtsCI	GGATG	6 cut(s)	72, 143, 174, 925, 1579, 1678
BtsIMutI	CAGTG	2 cut(s)	1081, 1866
Cac8I	GCNNGC	5 cut(s)	90, 530, 756, 1221, 1397
CfoI	GCGC	2 cut(s)	765, 902
Cfr10I	RCCGGY	3 cut(s)	340, 754, 1219
Cfr13I	GGNCC	7 cut(s)	300, 312, 435, 727, 740, 1526, 1573
Cfr9I	CCCGGG	1 cut(s)	520
Csp6I	GTAC	1 cut(s)	47
CviQI	GTAC	1 cut(s)	47
DdeI	CTNAG	4 cut(s)	677, 896, 1035, 1980
DraIII	CACNNNGTG	1 cut(s)	1085
EaeI	YGGCCR	5 cut(s)	238, 279, 324, 387, 1139
Eam1104I	CTCTTC	1 cut(s)	1599
EarI	CTCTTC	1 cut(s)	1599
EciI	GGCGGA	1 cut(s)	172
Ecl136II	GAGCTC	3 cut(s)	24, 88, 895
Eco105I	TACGTA	1 cut(s)	602
Eco130I	CCWWGG	3 cut(s)	9, 327, 1794
Eco24I	GRGCYC	5 cut(s)	26, 90, 897, 1033, 1837
Eco47I	GGWCC	4 cut(s)	300, 312, 727, 740
Eco47III	AGCGCT	1 cut(s)	901
Eco53kI	GAGCTC	3 cut(s)	24, 88, 895
Eco57I	CTGAAG	3 cut(s)	999, 1211, 1569
Eco81I	CCTNAGG	1 cut(s)	1035
Eco88I	CYCGRG	2 cut(s)	520, 1592
Eco91I	GGTNACC	1 cut(s)	1018
EcoICRI	GAGCTC	3 cut(s)	24, 88, 895
EcoO65I	GGTNACC	1 cut(s)	1018
EcoRII	CCWGG	1 cut(s)	168
EcoT14I	CCWWGG	3 cut(s)	9, 327, 1794
EcoT38I	GRGCYC	5 cut(s)	26, 90, 897, 1033, 1837
ErhI	CCWWGG	3 cut(s)	9, 327, 1794
FaqI	GGGAC	4 cut(s)	78, 726, 1560, 1721
FauNDI	CATATG	1 cut(s)	1614
FbaI	TGATCA	3 cut(s)	862, 1920, 2008
FblI	GTMKAC	1 cut(s)	1111
Fnu4HI	GCNGC	7 cut(s)	41, 252, 806, 1338, 1425, 1428, 1567
FokI	GGATG	6 cut(s)	59, 130, 161, 912, 1566, 1685
FriOI	GRGCYC	5 cut(s)	26, 90, 897, 1033, 1837
Fsp4HI	GCNGC	7 cut(s)	41, 252, 806, 1338, 1425, 1428, 1567
FspBI	CTAG	4 cut(s)	44, 227, 467, 1013
GlaI	GCGC	2 cut(s)	764, 901
GluI	GCNGC	7 cut(s)	41, 252, 806, 1338, 1425, 1428, 1567
GsaI	CCCAGC	1 cut(s)	54
GsuI	CTGGAG	3 cut(s)	683, 1124, 1519
HaeII	RGCGCY	2 cut(s)	766, 903
HaeIII	GGCC	9 cut(s)	240, 281, 326, 389, 436, 754, 1141, 1527, 1574
HhaI	GCGC	2 cut(s)	765, 902
Hin6I	GCGC	2 cut(s)	763, 900
HinP1I	GCGC	2 cut(s)	763, 900
HincII	GTYRAC	2 cut(s)	247, 646
HindII	GTYRAC	2 cut(s)	247, 646
HindIII	AAGCTT	1 cut(s)	2025
HinfI	GANTC	7 cut(s)	420, 590, 665, 673, 997, 1201, 1512
HphI	GGTGA	5 cut(s)	956, 1012, 1273, 1749, 1930
Hpy166II	GTNNAC	3 cut(s)	247, 646, 1112
Hpy188I	TCNGA	8 cut(s)	774, 967, 996, 1067, 1416, 1517, 1691, 1813
Hpy188III	TCNNGA	9 cut(s)	467, 514, 662, 698, 1001, 1366, 1592, 1817, 2016
Hpy8I	GTNNAC	3 cut(s)	247, 646, 1112
Hpy99I	CGWCG	4 cut(s)	107, 137, 359, 1102
HpyCH4III	ACNGT	3 cut(s)	130, 1085, 1826
HpyCH4IV	ACGT	2 cut(s)	601, 1172
HpyF10VI	GCNNNNNNNGC	4 cut(s)	760, 802, 1396, 1405
HpyF3I	CTNAG	4 cut(s)	677, 896, 1035, 1980
HpySE526I	ACGT	2 cut(s)	601, 1172
HspAI	GCGC	2 cut(s)	763, 900
KroI	GCCGGC	2 cut(s)	754, 1219
KroNI	GCCGGC	2 cut(s)	756, 1221
Ksp22I	TGATCA	3 cut(s)	862, 1920, 2008
Lsp1109I	GCAGC	6 cut(s)	27, 817, 1349, 1436, 1439, 1578
LweI	GCATC	3 cut(s)	118, 283, 934
MaeI	CTAG	4 cut(s)	44, 227, 467, 1013
MaeII	ACGT	2 cut(s)	601, 1172
MaeIII	GTNAC	5 cut(s)	944, 1001, 1018, 1077, 1966
MbiI	CCGCTC	2 cut(s)	511, 843
MboII	GAAGA	8 cut(s)	256, 371, 557, 668, 1279, 1350, 1441, 1616
MflI	RGATCY	3 cut(s)	516, 658, 694
MhlI	GDGCHC	5 cut(s)	26, 90, 897, 1033, 1837
MlsI	TGGCCA	1 cut(s)	1141
MluNI	TGGCCA	1 cut(s)	1141
MlyI	GAGTC	5 cut(s)	429, 599, 674, 682, 991
MmeI	TCCRAC	3 cut(s)	171, 1045, 1070
Mox20I	TGGCCA	1 cut(s)	1141
MroNI	GCCGGC	2 cut(s)	754, 1219
MroXI	GAANNNNTTC	2 cut(s)	200, 1511
MscI	TGGCCA	1 cut(s)	1141
MseI	TTAA	7 cut(s)	555, 717, 1460, 1560, 1665, 1722, 2029
MslI	CAYNNNNRTG	1 cut(s)	913
Msp20I	TGGCCA	1 cut(s)	1141
MspA1I	CMGCKG	2 cut(s)	254, 374
MspCI	CTTAAG	2 cut(s)	716, 1459
MspR9I	CCNGG	6 cut(s)	57, 170, 278, 298, 521, 522
Mva1269I	GAATGC	1 cut(s)	1123
MvaI	CCWGG	1 cut(s)	170
MwoI	GCNNNNNNNGC	4 cut(s)	760, 802, 1396, 1405
NaeI	GCCGGC	2 cut(s)	756, 1221
NciI	CCSGG	5 cut(s)	57, 278, 298, 521, 522
NcoI	CCATGG	2 cut(s)	9, 327
NdeI	CATATG	1 cut(s)	1614
NgoMIV	GCCGGC	2 cut(s)	754, 1219
NlaIV	GGNNCC	9 cut(s)	370, 437, 696, 723, 742, 1032, 1528, 1575, 1656
NmeAIII	GCCGAG	2 cut(s)	302, 1177
NmuCI	GTSAC	4 cut(s)	944, 1001, 1018, 1077
NspI	RCATGY	2 cut(s)	406, 805
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PctI	GAATGC	1 cut(s)	1123
PdiI	GCCGGC	2 cut(s)	756, 1221
PdmI	GAANNNNTTC	2 cut(s)	200, 1511
PfeI	GAWTC	2 cut(s)	1201, 1512
PkrI	GCNGC	7 cut(s)	42, 253, 807, 1339, 1426, 1429, 1568
PleI	GAGTC	5 cut(s)	428, 598, 673, 681, 991
PpsI	GAGTC	5 cut(s)	428, 598, 673, 681, 991
Ppu21I	YACGTR	1 cut(s)	602
PshAI	GACNNNNGTC	1 cut(s)	1008
PsiI	TTATAA	1 cut(s)	1434
Psp124BI	GAGCTC	3 cut(s)	26, 90, 897
Psp6I	CCWGG	1 cut(s)	168
PspEI	GGTNACC	1 cut(s)	1018
PspFI	CCCAGC	1 cut(s)	50
PspGI	CCWGG	1 cut(s)	168
PspN4I	GGNNCC	9 cut(s)	370, 437, 696, 723, 742, 1032, 1528, 1575, 1656
PspPI	GGNCC	7 cut(s)	300, 312, 435, 727, 740, 1526, 1573
PsuI	RGATCY	3 cut(s)	516, 658, 694
RsaI	GTAC	1 cut(s)	48
RsaNI	GTAC	1 cut(s)	47
RseI	CAYNNNNRTG	1 cut(s)	913
SacI	GAGCTC	3 cut(s)	26, 90, 897
SaqAI	TTAA	7 cut(s)	555, 717, 1460, 1560, 1665, 1722, 2029
SatI	GCNGC	7 cut(s)	41, 252, 806, 1338, 1425, 1428, 1567
Sau96I	GGNCC	7 cut(s)	300, 312, 435, 727, 740, 1526, 1573
SchI	GAGTC	5 cut(s)	429, 599, 674, 682, 991
ScrFI	CCNGG	6 cut(s)	57, 170, 278, 298, 521, 522
SduI	GDGCHC	5 cut(s)	26, 90, 897, 1033, 1837
SfaNI	GCATC	3 cut(s)	118, 283, 934
SinI	GGWCC	4 cut(s)	300, 312, 727, 740
SmaI	CCCGGG	1 cut(s)	522
SmiMI	CAYNNNNRTG	1 cut(s)	913
SmlI	CTYRAG	5 cut(s)	407, 512, 716, 1342, 1459
SmoI	CTYRAG	5 cut(s)	407, 512, 716, 1342, 1459
SnaBI	TACGTA	1 cut(s)	602
SsiI	CCGC	5 cut(s)	183, 252, 372, 509, 843
SspI	AATATT	1 cut(s)	1439
SspMI	CTAG	4 cut(s)	44, 227, 467, 1013
SstI	GAGCTC	3 cut(s)	26, 90, 897
StyD4I	CCNGG	6 cut(s)	55, 168, 276, 296, 519, 520
StyI	CCWWGG	3 cut(s)	9, 327, 1794
TaaI	ACNGT	3 cut(s)	130, 1085, 1826
TaiI	ACGT	2 cut(s)	604, 1175
TaqI	TCGA	5 cut(s)	105, 204, 357, 538, 1204
TaqII	GACCGA	1 cut(s)	728
TauI	GCSGC	1 cut(s)	254
TfiI	GAWTC	2 cut(s)	1201, 1512
Tru1I	TTAA	7 cut(s)	555, 717, 1460, 1560, 1665, 1722, 2029
Tru9I	TTAA	7 cut(s)	555, 717, 1460, 1560, 1665, 1722, 2029
TscAI	CASTG	2 cut(s)	1088, 1873
TseFI	GTSAC	4 cut(s)	944, 1001, 1018, 1077
TseI	GCWGC	6 cut(s)	40, 805, 1337, 1424, 1427, 1566
Tsp45I	GTSAC	4 cut(s)	944, 1001, 1018, 1077
TspDTI	ATGAA	7 cut(s)	132, 581, 586, 976, 1047, 1308, 1350
TspMI	CCCGGG	1 cut(s)	520
TspRI	CASTG	2 cut(s)	1088, 1873
Vha464I	CTTAAG	2 cut(s)	716, 1459
VpaK11BI	GGWCC	4 cut(s)	300, 312, 727, 740
XapI	RAATTY	3 cut(s)	1445, 1501, 1556
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	2 cut(s)	406, 805
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 325, 1134
XmaI	CCCGGG	1 cut(s)	520
XmiI	GTMKAC	1 cut(s)	1111
XmnI	GAANNNNTTC	2 cut(s)	200, 1511
XspI	CTAG	4 cut(s)	44, 227, 467, 1013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.