Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003264

Physical Location & Seq

Genomic Coordinates Forward (+)

11566549 .. 11568555

Gene Structure 2007 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0070700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGGAGCAGCAAAGCATACAGATTTAGCATGCATTTCAGAAGGTAAAGGATCATCATGTGTAGAACAACATGCCATCATTGAAGCAGCACCGATTGTGTCATCCTACAATGAAAAAATCCGTCCTCTCCTTGACGCCATTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCCAGCGTCCTTGAATCCCTGGCCGGCATAAGCCTGCCACATGGACAAGGTATCTACACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAAAATTCCTGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAACATTGCTGATGATATTGTCAATGCCACCAATGCTATTGCTGGTGGAGGTAAGGGGATTTCTAACACCCCATTGACTTTGTTAGTGAAGAAGAATGGTGTTCCGGATTTGACTATGATTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCAGCCTGAGGATATCTATGATCAAATCAAAGATATGATCATGCAGTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAGAGCTGGTGATAGAACTCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTTGAGAAGGTTACAGCAGATGATGTTAGTATTGGTCTTGGTTATGTGTGTGTGAGGAACCGGATTGAAGATGAAACTTATGAGGAGGCAAGGGCTATATCTCAACAACTTTTTCAAACTCATCCTTTGCTGTCCAAGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAACCTTGCCAGACATTGTCAAGAAGATAAATGACAAGCTGAATTCTTGCCTTTTGGAGTTGAACAAAATGCCAAAGAGTCTGTCACCTGTTGCTGAAGCCATGACCGCGTTTATGCAGATCATCGGATCATCAAAAGAATCGCTTAGGAAAATTCTGGTGAGAGGAGAATTTGAGGAATTCCCTGATGACGAGCACATGCATTGCACTGCTCGGCTTTATGAGATGCTCAATCAGTACTCAGATCAACTTCACAAGTGTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGCTTTTGGAGGAAGCAAAAGGTATTTGTCTTCCAAGTGTTGCTCCCCGCAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATCTCGAGCATACCTATTGGGTTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGTATGCACCAGAAGAGCTGGCCATAATCTTATAACGAGGATGAAAGAAAGGTCAGTTGAGTGGATGATGGAGATAATGGAAATGGAGAAGCTCACTGATTATACATGTAATCCAGAATATGTATCTGAATGGAGTAAGCTGATGGGTCAACAAGACGCATTTATACATTTGGTGTTAACTGAAAATCACTCTACAATCCATGTAGAGGGTATTGGGGAAGTTGAACTTGGAGTCCTTCGGCAGTATCCTCCTCCTCATGTTCTCTCTCAGGCTTTCGACTTGAAAATGAGGATGACTGCGTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACCAAGACATGGAGATTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGAGATTGAAAAAATGCTGGAGGAATCTCCAGCAGTTTCCATCAAGCGCGAGAAGCTGATTAATAGCATCAAAAAGCTTAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTAGATGGTGTTGCTACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 map00940

Pfam Domains

Protein Families

UDPGT

Protein Analysis

668

Amino Acids

74.54

Weight (kDa)

5.43

Isoelectric Point (pI)

45.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	65 - 239	8.6e-39	Dynamin family
Dynamin_M	PF01031	247 - 529	1.5e-60	Dynamin central region
GED	PF02212	572 - 661	1e-08	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003264)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g13970 FvH4_1g13990 FvH4_1g14000
rosa_chinensis	RchiOBHm_Chr2g0102291 RchiOBHm_Chr5g0049051
rosa_laevigata	RLG00000017143 RLG00000027915 RLG00000029969 RLG00000034587
rosa_multiflora	Rmu_co8035894.1_g000001 Rmu_sc0000530.1_g000029 Rmu_sc0005055.1_g000021 Rmu_sc0008757.1_g000011 Rmu_sc0030874.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032820 Rroxscaffold_2G00140590 Rroxscaffold_2G00140600 Rroxscaffold_4G00297540 Rroxscaffold_4G00322380
rosa_rugosa	Rorug01G0070700 Rorug01G0070800 Rorug01G0266200 Rorug01G0266200 Rorug02G0106200 Rorug05G0242800
rosa_samantha	Rh1AG279800 Rh1BG069800 Rh1CG263900 Rh1DG091500 Rh2BG160200 Rh2BG160300 Rh2CG159800 Rh5AG322500 Rh5BG332800 Rh5CG357900
rosa_wichuraiana	Rw1G024870 Rw5G030430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	299, 1478
Acc65I	GGTACC	1 cut(s)	289
AccB1I	GGYRCC	2 cut(s)	289, 724
AccB7I	CCANNNNNTGG	2 cut(s)	1831, 1871
AccII	CGCG	2 cut(s)	1058, 1926
AccIII	TCCGGA	1 cut(s)	484
AciI	CCGC	2 cut(s)	1056, 1300
AclWI	GGATC	2 cut(s)	58, 1084
AcoI	YGGCCR	2 cut(s)	246, 1465
AcsI	RAATTY	6 cut(s)	335, 897, 991, 1101, 1118, 1127
AcuI	CTGAAG	3 cut(s)	615, 1065, 1427
AcyI	GRCGYC	2 cut(s)	135, 725
AdeI	CACNNNGTG	1 cut(s)	671
AfaI	GTAC	3 cut(s)	291, 350, 1187
AfiI	CCNNNNNNNGG	4 cut(s)	533, 1651, 1831, 1871
AflIII	ACRYGT	1 cut(s)	1550
AjnI	CCWGG	3 cut(s)	243, 284, 508
AjuI	GAANNNNNNNTTGG	2 cut(s)	1656, 1688
AleI	CACNNNNGTG	1 cut(s)	1206
AloI	GAACNNNNNNTCC	6 cut(s)	321, 353, 888, 920, 1662, 1694
Alw21I	GWGCWC	2 cut(s)	369, 1146
AlwI	GGATC	2 cut(s)	58, 1084
Ama87I	CYCGRG	1 cut(s)	1345
Aor13HI	TCCGGA	1 cut(s)	484
AoxI	GGCC	2 cut(s)	246, 1465
ApeKI	GCWGC	2 cut(s)	8, 86
ApoI	RAATTY	6 cut(s)	335, 897, 991, 1101, 1118, 1127
ArsI	GACNNNNNNTTYG	2 cut(s)	1016, 1048
AseI	ATTAAT	1 cut(s)	1938
Asp700I	GAANNNNTTC	1 cut(s)	177
Asp718I	GGTACC	1 cut(s)	289
AspLEI	GCGC	2 cut(s)	727, 1926
AspS9I	GGNCC	1 cut(s)	1862
AsuHPI	GGTGA	5 cut(s)	218, 698, 1026, 1120, 1889
AsuII	TTCGAA	1 cut(s)	1811
AvaI	CYCGRG	1 cut(s)	1345
AvaII	GGWCC	1 cut(s)	1862
AxyI	CCTNAGG	1 cut(s)	543
BaeI	ACNNNNGTAYC	2 cut(s)	273, 306
BalI	TGGCCA	1 cut(s)	1467
BanI	GGYRCC	2 cut(s)	289, 724
BbsI	GAAGAC	1 cut(s)	1274
Bbv12I	GWGCWC	2 cut(s)	369, 1146
BbvI	GCAGC	2 cut(s)	20, 98
BccI	CCATC	7 cut(s)	83, 662, 1507, 1582, 1852, 1925, 1985
BciT130I	CCWGG	3 cut(s)	245, 286, 510
BciVI	GTATCC	1 cut(s)	1701
BclI	TGATCA	2 cut(s)	556, 573
BfaI	CTAG	4 cut(s)	321, 519, 939, 948
BfoI	RGCGCY	1 cut(s)	728
BfuI	GTATCC	1 cut(s)	1701
BglII	AGATCT	1 cut(s)	1983
BisI	GCNGC	2 cut(s)	9, 87
BlsI	GCNGC	2 cut(s)	10, 88
BmcAI	AGTACT	1 cut(s)	1187
Bme1390I	CCNGG	3 cut(s)	245, 286, 510
Bme18I	GGWCC	1 cut(s)	1862
BmeT110I	CYCGRG	1 cut(s)	1345
BmgT120I	GGNCC	1 cut(s)	1862
BmiI	GGNNCC	5 cut(s)	155, 291, 726, 797, 1863
BmrFI	CCNGG	3 cut(s)	245, 286, 510
BmsI	GCATC	3 cut(s)	612, 1164, 1953
BpiI	GAAGAC	1 cut(s)	1274
BpmI	CTGGAG	2 cut(s)	1890, 1916
Bpu10I	CCTNAGC	3 cut(s)	149, 1094, 1955
Bpu14I	TTCGAA	1 cut(s)	1811
BsaHI	GRCGYC	2 cut(s)	135, 725
BsaJI	CCNNGG	3 cut(s)	243, 285, 508
BsaWI	WCCGGW	2 cut(s)	484, 798
Bsc4I	CCNNNNNNNGG	4 cut(s)	533, 1651, 1831, 1871
Bse118I	RCCGGY	1 cut(s)	248
Bse1I	ACTGG	1 cut(s)	902
Bse21I	CCTNAGG	1 cut(s)	543
Bse3DI	GCAATG	3 cut(s)	384, 1150, 1309
BseAI	TCCGGA	1 cut(s)	484
BseBI	CCWGG	3 cut(s)	245, 286, 510
BseDI	CCNNGG	3 cut(s)	243, 285, 508
BseGI	GGATG	6 cut(s)	101, 666, 859, 1491, 1515, 1743
BseLI	CCNNNNNNNGG	4 cut(s)	533, 1651, 1831, 1871
BseMI	GCAATG	3 cut(s)	384, 1150, 1309
BseMII	CTCAG	5 cut(s)	163, 534, 1203, 1727, 1754
BseNI	ACTGG	1 cut(s)	902
BseRI	GAGGAG	5 cut(s)	836, 1128, 1259, 1686, 1689
BseXI	GCAGC	2 cut(s)	20, 98
BsgI	GTGCAG	1 cut(s)	944
Bsh1236I	CGCG	2 cut(s)	1058, 1926
BshFI	GGCC	2 cut(s)	248, 1467
BshNI	GGYRCC	2 cut(s)	289, 724
BsiHKAI	GWGCWC	2 cut(s)	369, 1146
BsiHKCI	CYCGRG	1 cut(s)	1345
BsiSI	CCGG	3 cut(s)	249, 485, 799
BslFI	GGGAC	1 cut(s)	1875
BslI	CCNNNNNNNGG	4 cut(s)	533, 1651, 1831, 1871
BsmFI	GGGAC	1 cut(s)	1875
BsmI	GAATGC	1 cut(s)	177
BsnI	GGCC	2 cut(s)	248, 1467
BsoBI	CYCGRG	1 cut(s)	1345
Bsp119I	TTCGAA	1 cut(s)	1811
Bsp1286I	GDGCHC	2 cut(s)	369, 1146
Bsp13I	TCCGGA	1 cut(s)	484
Bsp143I	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
BspACI	CCGC	2 cut(s)	1056, 1300
BspANI	GGCC	2 cut(s)	248, 1467
BspCNI	CTCAG	5 cut(s)	162, 535, 1202, 1726, 1755
BspEI	TCCGGA	1 cut(s)	484
BspFNI	CGCG	2 cut(s)	1058, 1926
BspLI	GGNNCC	5 cut(s)	155, 291, 726, 797, 1863
BspPI	GGATC	2 cut(s)	58, 1084
BspQI	GCTCTTC	1 cut(s)	1453
BspT104I	TTCGAA	1 cut(s)	1811
BspT107I	GGYRCC	2 cut(s)	289, 724
BsrDI	GCAATG	3 cut(s)	384, 1150, 1309
BsrFI	RCCGGY	1 cut(s)	248
BsrI	ACTGG	1 cut(s)	902
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	3 cut(s)	243, 285, 508
BssMI	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
BssNI	GRCGYC	2 cut(s)	135, 725
Bst2UI	CCWGG	3 cut(s)	245, 286, 510
Bst4CI	ACNGT	1 cut(s)	631
Bst6I	CTCTTC	2 cut(s)	591, 1453
BstACI	GRCGYC	2 cut(s)	135, 725
BstBI	TTCGAA	1 cut(s)	1811
BstC8I	GCNNGC	4 cut(s)	31, 250, 260, 1465
BstEII	GGTNACC	1 cut(s)	206
BstF5I	GGATG	6 cut(s)	101, 666, 859, 1491, 1515, 1743
BstFNI	CGCG	2 cut(s)	1058, 1926
BstH2I	RGCGCY	1 cut(s)	728
BstHHI	GCGC	2 cut(s)	727, 1926
BstKTI	GATC	9 cut(s)	53, 505, 559, 576, 1071, 1079, 1195, 1251, 1986
BstMBI	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
BstMWI	GCNNNNNNNGC	4 cut(s)	228, 413, 1055, 1930
BstNI	CCWGG	3 cut(s)	245, 286, 510
BstNSI	RCATGY	4 cut(s)	33, 74, 1150, 1554
BstPI	GGTNACC	1 cut(s)	206
BstSCI	CCNGG	3 cut(s)	243, 284, 508
BstUI	CGCG	2 cut(s)	1058, 1926
BstV1I	GCAGC	2 cut(s)	20, 98
BstV2I	GAAGAC	1 cut(s)	1274
BstX2I	RGATCY	1 cut(s)	1983
BstXI	CCANNNNNNTGG	1 cut(s)	218
BstYI	RGATCY	1 cut(s)	1983
Bsu36I	CCTNAGG	1 cut(s)	543
BsuI	GTATCC	1 cut(s)	1701
BsuRI	GGCC	2 cut(s)	248, 1467
BtsCI	GGATG	6 cut(s)	101, 666, 859, 1491, 1515, 1743
BtsI	GCAGTG	1 cut(s)	1155
BtsIMutI	CAGTG	3 cut(s)	369, 1155, 1539
Cac8I	GCNNGC	4 cut(s)	31, 250, 260, 1465
CfoI	GCGC	2 cut(s)	727, 1926
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	1 cut(s)	1862
CseI	GACGC	3 cut(s)	143, 220, 1610
Csp6I	GTAC	3 cut(s)	290, 349, 1186
CspCI	CAANNNNNGTGG	2 cut(s)	178, 213
CviQI	GTAC	3 cut(s)	290, 349, 1186
DinI	GGCGCC	1 cut(s)	726
DpnI	GATC	9 cut(s)	52, 504, 558, 575, 1070, 1078, 1194, 1250, 1985
DpnII	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
DraIII	CACNNNGTG	1 cut(s)	671
EaeI	YGGCCR	2 cut(s)	246, 1465
Eam1104I	CTCTTC	2 cut(s)	591, 1453
EarI	CTCTTC	2 cut(s)	591, 1453
Eco32I	GATATC	1 cut(s)	550
Eco47I	GGWCC	1 cut(s)	1862
Eco57I	CTGAAG	3 cut(s)	615, 1065, 1427
Eco81I	CCTNAGG	1 cut(s)	543
Eco88I	CYCGRG	1 cut(s)	1345
Eco91I	GGTNACC	1 cut(s)	206
EcoO65I	GGTNACC	1 cut(s)	206
EcoRI	GAATTC	3 cut(s)	897, 991, 1127
EcoRII	CCWGG	3 cut(s)	243, 284, 508
EcoRV	GATATC	1 cut(s)	550
EcoT22I	ATGCAT	3 cut(s)	35, 1152, 1419
EgeI	GGCGCC	1 cut(s)	726
EheI	GGCGCC	1 cut(s)	726
FalI	AAGNNNNNCTT	4 cut(s)	1077, 1109, 1656, 1688
FaqI	GGGAC	1 cut(s)	1875
FauI	CCCGC	1 cut(s)	1307
FbaI	TGATCA	2 cut(s)	556, 573
Fnu4HI	GCNGC	2 cut(s)	9, 87
FokI	GGATG	6 cut(s)	88, 673, 846, 1498, 1522, 1750
Fsp4HI	GCNGC	2 cut(s)	9, 87
FspBI	CTAG	4 cut(s)	321, 519, 939, 948
GlaI	GCGC	2 cut(s)	726, 1925
GluI	GCNGC	2 cut(s)	9, 87
GsuI	CTGGAG	2 cut(s)	1890, 1916
HaeII	RGCGCY	1 cut(s)	728
HaeIII	GGCC	2 cut(s)	248, 1467
HapII	CCGG	3 cut(s)	249, 485, 799
HgaI	GACGC	3 cut(s)	143, 220, 1610
HhaI	GCGC	2 cut(s)	727, 1926
Hin1I	GRCGYC	2 cut(s)	135, 725
Hin6I	GCGC	2 cut(s)	725, 1924
HinP1I	GCGC	2 cut(s)	725, 1924
HincII	GTYRAC	3 cut(s)	382, 1595, 1623
HindII	GTYRAC	3 cut(s)	382, 1595, 1623
HindIII	AAGCTT	3 cut(s)	933, 1253, 1952
HpaI	GTTAAC	1 cut(s)	1623
HpaII	CCGG	3 cut(s)	249, 485, 799
HphI	GGTGA	5 cut(s)	218, 698, 1026, 1120, 1889
Hpy166II	GTNNAC	4 cut(s)	382, 1595, 1623, 1822
Hpy188I	TCNGA	5 cut(s)	40, 1076, 1192, 1573, 1764
Hpy188III	TCNNGA	7 cut(s)	151, 326, 485, 658, 970, 1345, 1559
Hpy8I	GTNNAC	4 cut(s)	382, 1595, 1623, 1822
HpyAV	CCTTC	8 cut(s)	35, 167, 725, 739, 1330, 1366, 1691, 1761
HpyCH4III	ACNGT	1 cut(s)	631
HpyF10VI	GCNNNNNNNGC	4 cut(s)	228, 413, 1055, 1930
Hsp92I	GRCGYC	2 cut(s)	135, 725
HspAI	GCGC	2 cut(s)	725, 1924
KasI	GGCGCC	1 cut(s)	724
Kpn2I	TCCGGA	1 cut(s)	484
KpnI	GGTACC	1 cut(s)	293
KroI	GCCGGC	1 cut(s)	248
KroNI	GCCGGC	1 cut(s)	250
Ksp22I	TGATCA	2 cut(s)	556, 573
KspAI	GTTAAC	1 cut(s)	1623
Kzo9I	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
LguI	GCTCTTC	1 cut(s)	1453
LmnI	GCTCC	4 cut(s)	5, 153, 189, 1300
Lsp1109I	GCAGC	2 cut(s)	20, 98
LweI	GCATC	3 cut(s)	612, 1164, 1953
MaeI	CTAG	4 cut(s)	321, 519, 939, 948
MaeIII	GTNAC	7 cut(s)	206, 663, 706, 748, 1032, 1217, 1229
MalI	GATC	9 cut(s)	52, 504, 558, 575, 1070, 1078, 1194, 1250, 1985
MboI	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
MboII	GAAGA	9 cut(s)	481, 484, 608, 818, 985, 1223, 1274, 1403, 1470
MflI	RGATCY	1 cut(s)	1983
MhlI	GDGCHC	2 cut(s)	369, 1146
MlsI	TGGCCA	1 cut(s)	1467
MluCI	AATT	7 cut(s)	335, 897, 991, 1101, 1118, 1127, 1867
MluNI	TGGCCA	1 cut(s)	1467
Mly113I	GGCGCC	1 cut(s)	725
MlyI	GAGTC	2 cut(s)	1036, 1686
MmeI	TCCRAC	2 cut(s)	324, 874
Mox20I	TGGCCA	1 cut(s)	1467
Mph1103I	ATGCAT	3 cut(s)	35, 1152, 1419
MroI	TCCGGA	1 cut(s)	484
MroNI	GCCGGC	1 cut(s)	248
MroXI	GAANNNNTTC	1 cut(s)	177
MscI	TGGCCA	1 cut(s)	1467
MseI	TTAA	3 cut(s)	1412, 1622, 1938
MslI	CAYNNNNRTG	4 cut(s)	164, 372, 659, 1206
Msp20I	TGGCCA	1 cut(s)	1467
MspI	CCGG	3 cut(s)	249, 485, 799
MspR9I	CCNGG	3 cut(s)	245, 286, 510
Mva1269I	GAATGC	1 cut(s)	177
MvaI	CCWGG	3 cut(s)	245, 286, 510
MvnI	CGCG	2 cut(s)	1058, 1926
MwoI	GCNNNNNNNGC	4 cut(s)	228, 413, 1055, 1930
NaeI	GCCGGC	1 cut(s)	250
NarI	GGCGCC	1 cut(s)	725
NdeII	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
NgoMIV	GCCGGC	1 cut(s)	248
NlaIV	GGNNCC	5 cut(s)	155, 291, 726, 797, 1863
NmeAIII	GCCGAG	1 cut(s)	1141
NmuCI	GTSAC	5 cut(s)	206, 663, 706, 1032, 1217
NsiI	ATGCAT	3 cut(s)	35, 1152, 1419
NspI	RCATGY	4 cut(s)	33, 74, 1150, 1554
NspV	TTCGAA	1 cut(s)	1811
OliI	CACNNNNGTG	1 cut(s)	1206
PaeI	GCATGC	1 cut(s)	33
PaeR7I	CTCGAG	1 cut(s)	1345
PciI	ACATGT	1 cut(s)	1550
PciSI	GCTCTTC	1 cut(s)	1453
PctI	GAATGC	1 cut(s)	177
PdiI	GCCGGC	1 cut(s)	250
PdmI	GAANNNNTTC	1 cut(s)	177
PfeI	GAWTC	8 cut(s)	239, 513, 650, 928, 1088, 1341, 1901, 1961
PflFI	GACNNNGTC	1 cut(s)	965
PflMI	CCANNNNNTGG	2 cut(s)	1831, 1871
PkrI	GCNGC	2 cut(s)	10, 88
PleI	GAGTC	2 cut(s)	1035, 1685
PluTI	GGCGCC	1 cut(s)	728
PpsI	GAGTC	2 cut(s)	1035, 1685
PscI	ACATGT	1 cut(s)	1550
PshBI	ATTAAT	1 cut(s)	1938
PsiI	TTATAA	2 cut(s)	299, 1478
Psp6I	CCWGG	3 cut(s)	243, 284, 508
PspEI	GGTNACC	1 cut(s)	206
PspGI	CCWGG	3 cut(s)	243, 284, 508
PspN4I	GGNNCC	5 cut(s)	155, 291, 726, 797, 1863
PspPI	GGNCC	1 cut(s)	1862
PsuI	RGATCY	1 cut(s)	1983
PsyI	GACNNNGTC	1 cut(s)	965
RsaI	GTAC	3 cut(s)	291, 350, 1187
RsaNI	GTAC	3 cut(s)	290, 349, 1186
RseI	CAYNNNNRTG	4 cut(s)	164, 372, 659, 1206
SapI	GCTCTTC	1 cut(s)	1453
SaqAI	TTAA	3 cut(s)	1412, 1622, 1938
SatI	GCNGC	2 cut(s)	9, 87
Sau3AI	GATC	9 cut(s)	50, 502, 556, 573, 1068, 1076, 1192, 1248, 1983
Sau96I	GGNCC	1 cut(s)	1862
ScaI	AGTACT	1 cut(s)	1187
SchI	GAGTC	2 cut(s)	1036, 1686
ScrFI	CCNGG	3 cut(s)	245, 286, 510
SduI	GDGCHC	2 cut(s)	369, 1146
SfaNI	GCATC	3 cut(s)	612, 1164, 1953
SfoI	GGCGCC	1 cut(s)	726
Sfr274I	CTCGAG	1 cut(s)	1345
SfuI	TTCGAA	1 cut(s)	1811
SinI	GGWCC	1 cut(s)	1862
SlaI	CTCGAG	1 cut(s)	1345
SmiMI	CAYNNNNRTG	4 cut(s)	164, 372, 659, 1206
SmlI	CTYRAG	1 cut(s)	1345
SmoI	CTYRAG	1 cut(s)	1345
SphI	GCATGC	1 cut(s)	33
Sse9I	AATT	7 cut(s)	335, 897, 991, 1101, 1118, 1127, 1867
SsiI	CCGC	2 cut(s)	1056, 1300
SspDI	GGCGCC	1 cut(s)	724
SspMI	CTAG	4 cut(s)	321, 519, 939, 948
StyD4I	CCNGG	3 cut(s)	243, 284, 508
TaaI	ACNGT	1 cut(s)	631
TaqI	TCGA	3 cut(s)	1346, 1722, 1811
TasI	AATT	7 cut(s)	335, 897, 991, 1101, 1118, 1127, 1867
TatI	WGTACW	2 cut(s)	348, 1185
TfiI	GAWTC	8 cut(s)	239, 513, 650, 928, 1088, 1341, 1901, 1961
Tru1I	TTAA	3 cut(s)	1412, 1622, 1938
Tru9I	TTAA	3 cut(s)	1412, 1622, 1938
TscAI	CASTG	3 cut(s)	376, 1162, 1546
TseFI	GTSAC	5 cut(s)	206, 663, 706, 1032, 1217
TseI	GCWGC	2 cut(s)	8, 86
Tsp45I	GTSAC	5 cut(s)	206, 663, 706, 1032, 1217
TspDTI	ATGAA	4 cut(s)	126, 521, 825, 1502
TspGWI	ACGGA	1 cut(s)	110
TspRI	CASTG	3 cut(s)	376, 1162, 1546
Tth111I	GACNNNGTC	1 cut(s)	965
Van91I	CCANNNNNTGG	2 cut(s)	1831, 1871
VpaK11BI	GGWCC	1 cut(s)	1862
VspI	ATTAAT	1 cut(s)	1938
XapI	RAATTY	6 cut(s)	335, 897, 991, 1101, 1118, 1127
XceI	RCATGY	4 cut(s)	33, 74, 1150, 1554
XhoI	CTCGAG	1 cut(s)	1345
XmnI	GAANNNNTTC	1 cut(s)	177
XspI	CTAG	4 cut(s)	321, 519, 939, 948
ZrmI	AGTACT	1 cut(s)	1187
Zsp2I	ATGCAT	3 cut(s)	35, 1152, 1419

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.