RLG00000034587

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0003264
Physical Location & Seq
Reverse (-)
45411963 .. 45413393
1431 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034587

Sequence Viewer

Length: 1431 bp
ATGGCGGAGAGAAGCTCAAAAGCACATGCGTTGCTGGTCCCTAGCCCCGGCATGGGCCACCTCATCCCCTTAATGGAGCTCGCCAGCTCCCTGGTCACCCACCACAACTGCCACGCCACACTCGTCGTCGTCGTTTCATCCAACACCTCTCCGGCACAATCCCAACTCATCCGATCGGCCAGGACCCAGAAGCTCTACGACATAGTTGAGCTCCCAGCACCCTCCGGCCACGACTCCAACGCCGCCGGTTCAGTCTTCACGCACCTCTCCGCCATCATGCTCGATACCCGATCATCTCTCCGCTCTGCAATCTCCGCCATGGAGCTCAAACCCGCCGCCATGATCGTCGATCTTTTCGGCACTGCAGTCCTCACTGTTGCACAAGAATTCCACATGCTCAAGTATGTAACGCTAGTCTCCTCTGCCTGGCCTCTAACCTTGCTTCTATATGCGCCAATTCTAGATAAACAGATAGATGGAGAGTATTTGGATCGCAAAGAGCTGCTGGAGATCCCGGGTTGCAAGCCGGTTCGACCTGAAGATGTGGTGAAGCCGATGATGGATAGGAAGGATCGTGAATACGAGTCCTTCTTAAGAATTGGGAAGGAGATTACTTCAATGAGCGATGGCATCTTGATCAACACATGGGAGGATCTGGAGCCCAACTGTCTTAAGGCTATGAGAGAGCACCCGGAGTGGAAGAAGATAATTAGGGTCCCGCTGTACACTATCGGTCCGATGGTTAGACTGGCAGGGCAGTCCGGTGGTGGTGGTCCGAGGAGTGAGCTGTTGGGTTGGCTGGATAAGCAACCTAGTGAGTCTGTGCTTTACATATCGTTTGGGAGCGGTGGGGTTCTTTCGGCTGAACAGATCACAGAGATGGCTTGGGGTTTAGAGCTTAGTAAGCAGAGGTTTATATGGGTGGTGCAGCCACCAAGCAAAGGAGGTGCTGGAGGCAATGACATTTCGGAGTATTTGCCTGAGGGGTTCACGGCTCGGACTCATGAAATGGGTGTGGTGGTCACCACTTGGGCTCCTCAGTCGGAAATCTTGGCTCATTCGTCGGTGGGAGGGTTTCTCTCGCACTGCGGTTGGAACTCGGCGCTGGAGAGTATACTGAATGGTGTGCCAATGATCGCATGGCCGCTATATGCAGAGCAGAAAATGGTTGCTACACTGCTGGTGGAGGAGTTCAAGGTGGCAATTCGACCTAAAGTTCTGCCAACAAAAGCAGTAGCAGGGAGGGAGGAGATTGAGATGTTGGTGAGGAAGATTATGGAGCAGAAAGAAGGAGATGCAATGAGGGCAAGAGCTAAAGAACTGAAAGCAAGTGGGGAAGAAGCTCTGAGTGTGGGCGGGTCTTCTTTCAATATGCTGTCTGAATTGTCAAGGCTATGCAAGATCAAATCCGAACAGCAATGCCAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 map00940
Pfam Domains
Protein Families
UDPGT

Protein Analysis

477

Amino Acids

52.21

Weight (kDa)

6.22

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 272 - 394 2.5e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 303, 846
AccI GTMKAC 1 cut(s) 1114
AclWI GGATC 4 cut(s) 498, 505, 579, 660
AcoI YGGCCR 3 cut(s) 177, 226, 1142
AcsI RAATTY 1 cut(s) 386
AcuI CTGAAG 1 cut(s) 558
AfaI GTAC 1 cut(s) 725
AfiI CCNNNNNNNGG 6 cut(s) 47, 52, 53, 73, 426, 941
AflII CTTAAG 2 cut(s) 592, 671
AgsI TTSAA 3 cut(s) 618, 1195, 1369
AjnI CCWGG 3 cut(s) 90, 179, 425
Alw21I GWGCWC 4 cut(s) 81, 213, 327, 690
Alw26I GTCTC 1 cut(s) 421
AlwI GGATC 4 cut(s) 498, 505, 579, 660
Ama87I CYCGRG 1 cut(s) 514
AoxI GGCC 5 cut(s) 55, 177, 226, 428, 1142
ApeKI GCWGC 2 cut(s) 502, 928
ApoI RAATTY 1 cut(s) 386
AspLEI GCGC 2 cut(s) 454, 1105
AspS9I GGNCC 6 cut(s) 37, 55, 183, 715, 734, 773
AsuC2I CCSGG 4 cut(s) 48, 515, 516, 692
AsuHPI GGTGA 4 cut(s) 88, 559, 1015, 1276
AvaI CYCGRG 1 cut(s) 514
AvaII GGWCC 5 cut(s) 37, 183, 715, 734, 773
AxyI CCTNAGG 1 cut(s) 981
BanII GRGCYC 5 cut(s) 81, 213, 327, 663, 1036
BbsI GAAGAC 2 cut(s) 247, 1353
Bbv12I GWGCWC 4 cut(s) 81, 213, 327, 690
BbvI GCAGC 2 cut(s) 489, 940
BccI CCATC 6 cut(s) 281, 470, 553, 620, 733, 874
BceAI ACGGC 1 cut(s) 1008
BciT130I CCWGG 3 cut(s) 92, 181, 427
BclI TGATCA 1 cut(s) 636
BcnI CCSGG 4 cut(s) 48, 515, 516, 692
BcoDI GTCTC 1 cut(s) 421
BfaI CTAG 4 cut(s) 42, 413, 461, 813
BfmI CTRYAG 1 cut(s) 363
BfoI RGCGCY 1 cut(s) 1106
BfrI CTTAAG 2 cut(s) 592, 671
BisI GCNGC 5 cut(s) 243, 336, 503, 929, 1145
BlsI GCNGC 5 cut(s) 244, 337, 504, 930, 1146
Bme1390I CCNGG 7 cut(s) 48, 92, 181, 427, 515, 516, 692
Bme18I GGWCC 5 cut(s) 37, 183, 715, 734, 773
BmeT110I CYCGRG 1 cut(s) 514
BmgT120I GGNCC 6 cut(s) 37, 55, 183, 715, 734, 773
BmiI GGNNCC 6 cut(s) 39, 185, 660, 716, 717, 1035
BmrFI CCNGG 7 cut(s) 48, 92, 181, 427, 515, 516, 692
BmsI GCATC 2 cut(s) 639, 1285
BpiI GAAGAC 2 cut(s) 247, 1353
BplI GAGNNNNNCTC 3 cut(s) 31, 1062, 1094
BpmI CTGGAG 4 cut(s) 527, 677, 972, 1127
BpuEI CTTGAG 1 cut(s) 383
BpuMI CCSGG 4 cut(s) 48, 515, 516, 692
BsaJI CCNNGG 5 cut(s) 46, 90, 318, 514, 776
BsaWI WCCGGW 1 cut(s) 761
BsaXI ACNNNNNCTCC 2 cut(s) 1018, 1048
Bsc4I CCNNNNNNNGG 6 cut(s) 47, 52, 53, 73, 426, 941
Bse118I RCCGGY 2 cut(s) 245, 526
Bse1I ACTGG 1 cut(s) 753
Bse21I CCTNAGG 1 cut(s) 981
Bse3DI GCAATG 3 cut(s) 964, 1305, 1424
BseBI CCWGG 3 cut(s) 92, 181, 427
BseDI CCNNGG 5 cut(s) 46, 90, 318, 514, 776
BseGI GGATG 3 cut(s) 63, 137, 168
BseLI CCNNNNNNNGG 6 cut(s) 47, 52, 53, 73, 426, 941
BseMI GCAATG 3 cut(s) 964, 1305, 1424
BseMII CTCAG 3 cut(s) 972, 1052, 1337
BseNI ACTGG 1 cut(s) 753
BseRI GAGGAG 5 cut(s) 409, 793, 1026, 1202, 1262
BseXI GCAGC 2 cut(s) 489, 940
BseYI CCCAGC 1 cut(s) 214
BsgI GTGCAG 1 cut(s) 947
Bsh1285I CGRYCG 1 cut(s) 176
BshFI GGCC 5 cut(s) 57, 179, 228, 430, 1144
BsiEI CGRYCG 1 cut(s) 176
BsiHKAI GWGCWC 4 cut(s) 81, 213, 327, 690
BsiHKCI CYCGRG 1 cut(s) 514
BsiSI CCGG 8 cut(s) 48, 152, 225, 246, 515, 527, 692, 762
BslFI GGGAC 2 cut(s) 23, 701
BslI CCNNNNNNNGG 6 cut(s) 47, 52, 53, 73, 426, 941
BsmAI GTCTC 1 cut(s) 421
BsmFI GGGAC 2 cut(s) 23, 701
BsnI GGCC 5 cut(s) 57, 179, 228, 430, 1144
BsoBI CYCGRG 1 cut(s) 514
Bsp1286I GDGCHC 6 cut(s) 81, 213, 327, 663, 690, 1036
Bsp1407I TGTACA 1 cut(s) 723
Bsp19I CCATGG 1 cut(s) 318
BspANI GGCC 5 cut(s) 57, 179, 228, 430, 1144
BspCNI CTCAG 3 cut(s) 973, 1051, 1338
BspHI TCATGA 1 cut(s) 1003
BspLI GGNNCC 6 cut(s) 39, 185, 660, 716, 717, 1035
BspMAI CTGCAG 1 cut(s) 367
BspPI GGATC 4 cut(s) 498, 505, 579, 660
BspTI CTTAAG 2 cut(s) 592, 671
BsrBI CCGCTC 2 cut(s) 303, 846
BsrDI GCAATG 3 cut(s) 964, 1305, 1424
BsrFI RCCGGY 2 cut(s) 245, 526
BsrGI TGTACA 1 cut(s) 723
BsrI ACTGG 1 cut(s) 753
BssAI RCCGGY 2 cut(s) 245, 526
BssECI CCNNGG 5 cut(s) 46, 90, 318, 514, 776
BssNAI GTATAC 1 cut(s) 1115
BssT1I CCWWGG 1 cut(s) 318
Bst1107I GTATAC 1 cut(s) 1115
Bst2UI CCWGG 3 cut(s) 92, 181, 427
Bst4CI ACNGT 2 cut(s) 376, 668
BstAFI CTTAAG 2 cut(s) 592, 671
BstAUI TGTACA 1 cut(s) 723
BstC8I GCNNGC 3 cut(s) 81, 85, 524
BstDEI CTNAG 4 cut(s) 899, 981, 1038, 1346
BstDSI CCRYGG 1 cut(s) 318
BstEII GGTNACC 2 cut(s) 94, 1021
BstF5I GGATG 3 cut(s) 63, 137, 168
BstH2I RGCGCY 1 cut(s) 1106
BstHHI GCGC 2 cut(s) 454, 1105
BstMAI GTCTC 1 cut(s) 421
BstMCI CGRYCG 1 cut(s) 176
BstMWI GCNNNNNNNGC 4 cut(s) 314, 805, 904, 1304
BstNI CCWGG 3 cut(s) 92, 181, 427
BstNSI RCATGY 2 cut(s) 29, 397
BstPI GGTNACC 2 cut(s) 94, 1021
BstSCI CCNGG 7 cut(s) 46, 90, 179, 425, 513, 514, 690
BstSFI CTRYAG 1 cut(s) 363
BstV1I GCAGC 2 cut(s) 489, 940
BstV2I GAAGAC 2 cut(s) 247, 1353
BstX2I RGATCY 2 cut(s) 510, 652
BstXI CCANNNNNNTGG 1 cut(s) 91
BstYI RGATCY 2 cut(s) 510, 652
BstZ17I GTATAC 1 cut(s) 1115
Bsu36I CCTNAGG 1 cut(s) 981
BsuRI GGCC 5 cut(s) 57, 179, 228, 430, 1144
BtgI CCRYGG 1 cut(s) 318
BtgZI GCGATG 1 cut(s) 639
BtsCI GGATG 3 cut(s) 63, 137, 168
BtsI GCAGTG 3 cut(s) 360, 1084, 1175
BtsIMutI CAGTG 4 cut(s) 360, 372, 1084, 1175
Cac8I GCNNGC 3 cut(s) 81, 85, 524
CciI TCATGA 1 cut(s) 1003
CfoI GCGC 2 cut(s) 454, 1105
Cfr10I RCCGGY 2 cut(s) 245, 526
Cfr13I GGNCC 6 cut(s) 37, 55, 183, 715, 734, 773
Cfr9I CCCGGG 1 cut(s) 514
CpoI CGGWCCG 1 cut(s) 734
Csp6I GTAC 1 cut(s) 724
CspI CGGWCCG 1 cut(s) 734
CviAII CATG 9 cut(s) 26, 52, 277, 319, 340, 394, 645, 1004, 1140
CviQI GTAC 1 cut(s) 724
DdeI CTNAG 4 cut(s) 899, 981, 1038, 1346
EaeI YGGCCR 3 cut(s) 177, 226, 1142
EciI GGCGGA 3 cut(s) 20, 259, 304
Ecl136II GAGCTC 3 cut(s) 79, 211, 325
Eco130I CCWWGG 1 cut(s) 318
Eco24I GRGCYC 5 cut(s) 81, 213, 327, 663, 1036
Eco47I GGWCC 5 cut(s) 37, 183, 715, 734, 773
Eco53kI GAGCTC 3 cut(s) 79, 211, 325
Eco57I CTGAAG 1 cut(s) 558
Eco81I CCTNAGG 1 cut(s) 981
Eco88I CYCGRG 1 cut(s) 514
Eco91I GGTNACC 2 cut(s) 94, 1021
EcoICRI GAGCTC 3 cut(s) 79, 211, 325
EcoO109I RGGNCCY 2 cut(s) 183, 715
EcoO65I GGTNACC 2 cut(s) 94, 1021
EcoRI GAATTC 1 cut(s) 386
EcoRII CCWGG 3 cut(s) 90, 179, 425
EcoT14I CCWWGG 1 cut(s) 318
EcoT38I GRGCYC 5 cut(s) 81, 213, 327, 663, 1036
ErhI CCWWGG 1 cut(s) 318
FaeI CATG 9 cut(s) 29, 55, 280, 322, 343, 397, 648, 1007, 1143
FaqI GGGAC 2 cut(s) 23, 701
FatI CATG 9 cut(s) 25, 51, 276, 318, 339, 393, 644, 1003, 1139
FauI CCCGC 3 cut(s) 340, 726, 1349
FbaI TGATCA 1 cut(s) 636
FblI GTMKAC 1 cut(s) 1114
Fnu4HI GCNGC 5 cut(s) 243, 336, 503, 929, 1145
FokI GGATG 3 cut(s) 50, 124, 155
FriOI GRGCYC 5 cut(s) 81, 213, 327, 663, 1036
Fsp4HI GCNGC 5 cut(s) 243, 336, 503, 929, 1145
FspBI CTAG 4 cut(s) 42, 413, 461, 813
GlaI GCGC 2 cut(s) 453, 1104
GluI GCNGC 5 cut(s) 243, 336, 503, 929, 1145
GsaI CCCAGC 1 cut(s) 218
GsuI CTGGAG 4 cut(s) 527, 677, 972, 1127
HaeII RGCGCY 1 cut(s) 1106
HaeIII GGCC 5 cut(s) 57, 179, 228, 430, 1144
HapII CCGG 8 cut(s) 48, 152, 225, 246, 515, 527, 692, 762
HhaI GCGC 2 cut(s) 454, 1105
Hin1II CATG 9 cut(s) 29, 55, 280, 322, 343, 397, 648, 1007, 1143
Hin6I GCGC 2 cut(s) 452, 1103
HinP1I GCGC 2 cut(s) 452, 1103
HinfI GANTC 4 cut(s) 233, 584, 818, 1000
HpaII CCGG 8 cut(s) 48, 152, 225, 246, 515, 527, 692, 762
HphI GGTGA 4 cut(s) 88, 559, 1015, 1276
Hpy166II GTNNAC 3 cut(s) 726, 990, 1115
Hpy188I TCNGA 9 cut(s) 173, 738, 777, 970, 999, 1045, 1347, 1381, 1411
Hpy188III TCNNGA 5 cut(s) 461, 575, 634, 656, 1004
Hpy8I GTNNAC 3 cut(s) 726, 990, 1115
Hpy99I CGWCG 5 cut(s) 128, 131, 134, 350, 1066
HpyAV CCTTC 4 cut(s) 562, 598, 598, 1283
HpyCH4III ACNGT 2 cut(s) 376, 668
HpyCH4V TGCA 8 cut(s) 308, 365, 380, 522, 928, 1154, 1298, 1398
HpyF10VI GCNNNNNNNGC 4 cut(s) 314, 805, 904, 1304
HpyF3I CTNAG 4 cut(s) 899, 981, 1038, 1346
Hsp92II CATG 9 cut(s) 29, 55, 280, 322, 343, 397, 648, 1007, 1143
HspAI GCGC 2 cut(s) 452, 1103
KflI GGGWCCC 1 cut(s) 715
Ksp22I TGATCA 1 cut(s) 636
LmnI GCTCC 8 cut(s) 76, 92, 216, 322, 658, 843, 1039, 1279
Lsp1109I GCAGC 2 cut(s) 489, 940
LweI GCATC 2 cut(s) 639, 1285
MaeI CTAG 4 cut(s) 42, 413, 461, 813
MaeIII GTNAC 3 cut(s) 94, 406, 1021
MbiI CCGCTC 2 cut(s) 303, 846
MboII GAAGA 7 cut(s) 247, 551, 712, 715, 1282, 1349, 1353
MflI RGATCY 2 cut(s) 510, 652
MhlI GDGCHC 6 cut(s) 81, 213, 327, 663, 690, 1036
MluCI AATT 6 cut(s) 386, 456, 597, 708, 1203, 1382
MlyI GAGTC 4 cut(s) 227, 593, 827, 994
MmeI TCCRAC 4 cut(s) 165, 261, 1023, 1073
MseI TTAA 3 cut(s) 71, 593, 672
MslI CAYNNNNRTG 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 721
MspCI CTTAAG 2 cut(s) 592, 671
MspI CCGG 8 cut(s) 48, 152, 225, 246, 515, 527, 692, 762
MspR9I CCNGG 7 cut(s) 48, 92, 181, 427, 515, 516, 692
MvaI CCWGG 3 cut(s) 92, 181, 427
MwoI GCNNNNNNNGC 4 cut(s) 314, 805, 904, 1304
NciI CCSGG 4 cut(s) 48, 515, 516, 692
NcoI CCATGG 1 cut(s) 318
NlaIII CATG 9 cut(s) 29, 55, 280, 322, 343, 397, 648, 1007, 1143
NlaIV GGNNCC 6 cut(s) 39, 185, 660, 716, 717, 1035
NmeAIII GCCGAG 1 cut(s) 1079
NmuCI GTSAC 2 cut(s) 94, 1021
NspI RCATGY 2 cut(s) 29, 397
PagI TCATGA 1 cut(s) 1003
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 129
PkrI GCNGC 5 cut(s) 244, 337, 504, 930, 1146
Ple19I CGATCG 1 cut(s) 176
PleI GAGTC 4 cut(s) 227, 592, 826, 994
PpsI GAGTC 4 cut(s) 227, 592, 826, 994
PpuMI RGGWCCY 2 cut(s) 183, 715
Psp124BI GAGCTC 3 cut(s) 81, 213, 327
Psp5II RGGWCCY 2 cut(s) 183, 715
Psp6I CCWGG 3 cut(s) 90, 179, 425
PspEI GGTNACC 2 cut(s) 94, 1021
PspFI CCCAGC 1 cut(s) 214
PspGI CCWGG 3 cut(s) 90, 179, 425
PspN4I GGNNCC 6 cut(s) 39, 185, 660, 716, 717, 1035
PspPI GGNCC 6 cut(s) 37, 55, 183, 715, 734, 773
PspPPI RGGWCCY 2 cut(s) 183, 715
PstI CTGCAG 1 cut(s) 367
PsuI RGATCY 2 cut(s) 510, 652
PvuI CGATCG 1 cut(s) 176
RsaI GTAC 1 cut(s) 725
RsaNI GTAC 1 cut(s) 724
RseI CAYNNNNRTG 1 cut(s) 878
Rsr2I CGGWCCG 1 cut(s) 734
RsrII CGGWCCG 1 cut(s) 734
SacI GAGCTC 3 cut(s) 81, 213, 327
SaqAI TTAA 3 cut(s) 71, 593, 672
SatI GCNGC 5 cut(s) 243, 336, 503, 929, 1145
Sau96I GGNCC 6 cut(s) 37, 55, 183, 715, 734, 773
SchI GAGTC 4 cut(s) 227, 593, 827, 994
ScrFI CCNGG 7 cut(s) 48, 92, 181, 427, 515, 516, 692
SduI GDGCHC 6 cut(s) 81, 213, 327, 663, 690, 1036
SfaNI GCATC 2 cut(s) 639, 1285
SfcI CTRYAG 1 cut(s) 363
SinI GGWCC 5 cut(s) 37, 183, 715, 734, 773
SmaI CCCGGG 1 cut(s) 516
SmiMI CAYNNNNRTG 1 cut(s) 878
SmlI CTYRAG 3 cut(s) 398, 592, 671
SmoI CTYRAG 3 cut(s) 398, 592, 671
Sse9I AATT 6 cut(s) 386, 456, 597, 708, 1203, 1382
SspMI CTAG 4 cut(s) 42, 413, 461, 813
SstI GAGCTC 3 cut(s) 81, 213, 327
StyD4I CCNGG 7 cut(s) 46, 90, 179, 425, 513, 514, 690
StyI CCWWGG 1 cut(s) 318
TaaI ACNGT 2 cut(s) 376, 668
TaqI TCGA 4 cut(s) 282, 348, 532, 1207
TaqII GACCGA 1 cut(s) 722
TasI AATT 6 cut(s) 386, 456, 597, 708, 1203, 1382
TatI WGTACW 1 cut(s) 723
TauI GCSGC 3 cut(s) 245, 338, 1147
Tru1I TTAA 3 cut(s) 71, 593, 672
Tru9I TTAA 3 cut(s) 71, 593, 672
TscAI CASTG 4 cut(s) 367, 379, 1091, 1182
TseFI GTSAC 2 cut(s) 94, 1021
TseI GCWGC 2 cut(s) 502, 928
Tsp45I GTSAC 2 cut(s) 94, 1021
TspDTI ATGAA 2 cut(s) 126, 1020
TspMI CCCGGG 1 cut(s) 514
TspRI CASTG 4 cut(s) 367, 379, 1091, 1182
Vha464I CTTAAG 2 cut(s) 592, 671
VpaK11BI GGWCC 5 cut(s) 37, 183, 715, 734, 773
XapI RAATTY 1 cut(s) 386
XbaI TCTAGA 1 cut(s) 460
XceI RCATGY 2 cut(s) 29, 397
XcmI CCANNNNNNNNNTGG 1 cut(s) 1137
XmaI CCCGGG 1 cut(s) 514
XmiI GTMKAC 1 cut(s) 1114
XspI CTAG 4 cut(s) 42, 413, 461, 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.