Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

309451 .. 312753

Gene Structure 3303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g00630.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3201 bp

ATGACAGACATCACAAGCTCTGGGCACCAGTTCGACCTCGAGTCTCAGCTGACTCAGCATACAGTGTTGCTGATAACCAGTAGCAACCCACCAAGAGACCACTGGCGTTGGATTTACGTGATTCTCCAAGTACGCAAACTCCTCATCTCATCCAGAGCAAACAAACCGGCAAACAGGTCTCAACCATTTCCCCAGCTCTCATCAGCTATAATCCCCGGGCCTTATGCTATTATCAGCACTGACACTACTAGTGGTGATGCACGAGATGCGGACTTGCAACTGATATCAGGGACTACAGAAATCGTACCTGCAGCCTCGTCTCAAGTTTCTGGAGATGTCCATCAGATCGGGGAGGATGATGGTAGTCCTGCTGCTACAGATGCAAAACAGCATGCAAATATTGCCAAGATAATTGAGGAGAAAAACTTCGAGTCCTTACACCAGTTTGGAGGCGTCCAAGGAATTGCAGAGGCACTCACTACCAATTTACAGAATGGAATCCCAGGCGATGAAGATGTGAGTTCTCGACCGAGAGTTGGTGCACCCTTCAACACAGAACCTCCTGTTCAAGGCTTCTTCAAACTGCTCCTTCAGTACAGCAACAACTATATCATTATCCTTCTCTTGGTGGCCGCAGTGCTGTCAATTGGCTTTGGTATGAAGGAGAAAGACCCAAGTACCGGCTGGTATGAAGGGGCCATCATACTGTTTGTCATCATCATACTTGTTGTAGCACCTTCCATGCGCGACTTATGGCTTCAAAATTCACAGAGCCATGCAATGAGACAGACTGCAGGAACCATTACTTCGATGGTTGACGTCATCAGAGGGGGATCGCCATGTGAAGTACCCATATCTGATGTTGTTTCAGGTGACATAGTGCGCTTGAAACGGGGATCTACAGTTCCTGGTGATGGTTTGTTCGTTTCGGGTGAATTTTTAGTATCTGATGATGGTAAAGTGGCAACTATCAATGACGAGAAACCATTCTTGTTATGTGGTTCCAAGGTAGTTGGTGGGAATGGCCGTATGCTTGTAACGTCTGTGGGCATGGACACATCATGGGGTGCGCTGATGAACAAAGTAACCAAAACTCCTAATCAGGCTCATTTACCAGCTCAACTTGATAAGGTCAGCACAGGCACACAGATTATAGGGATCTCAATCTCTATCCACATCCTGGTAGTCTTGTTCTTCCGTTTCATGGTTGAAAGGGAAGACAATCACTCTAGCCTCCCAGACGGGAAACCGCCAACTTCAAGCAAGGAAATAATGAATTTAATTGAGAAAATTGTGATGAAACCGAGTGGTAAGATCAATATCCTAACAACATATCTGGCTATATTCCTCGTAGGAGTTGTAGAAGGAATACCTCTTGTTGTTACACTTGCCATAAGGTATTGGAATAAGAAGATATTATCTGGAAAGGCCACTTCTCAAGGGACTTTGGCTTGTGTCACCATGGGATCTGTCACAACTATTTGCACTGACAAAACTGGAGTCCTAACCTTGAACACACTGAAAGTGCACAAGTGTTACATTGGTGATGAAGTCATAGAAACTGACTATGTCACTGGAATAAACACACATGTTCGTGAAGCTTTGTGCAACGGAATCAGCACACCCCTTCTGACACCAAGCCCTCATTGCAGCTCAACAGATGACCCGCTCCTTTCCTGTGATGACTTCAATTTGGGAATGCAATATGAGGTTTTGAGGCAAAATTGTTCCATTGTGGAGATCAAAGGATTGAGCACCAATGAGGAAGGCAGTGGAGTATTGATAAGTAGTCCTAACAATGAAGGAGATATGCACTCGCATTGGAAGGGACCTGCAACAACAATATTAGACATGTGTTCGCACTACAATGATAACAAAGGGGAAACAAAGGTCATGGATGAACATAGTATATTGGCTTTTAACCAAATCATAGAGGGTATGCAATCCAAATATCTCAAGACCATCGCATTTGCTTACAGACAGACTGAGGTTTCGATGCTAGAAGACAACAGCTTAATCTTAATAGCACTGCTCGGTGTGAGGTATTCATGCTGTACAGATATAGTGGAAGCTTGTCAAGAAGCAGGGGTCAACATCATACTGGTCTCAGAAGATAATGTTTCAGACCTGAAAGACATTGCTGATGAGTGTGGAATACTTCTGAACCCAAACAGATCGGTAGAAGGTAAAAGTTTTCGGAATAGCACCCAAGAAAAGAGGATGGACATGGCAGATAAAATATGCGTCATGGGAAACTCCACTCCTTTGGACAGGCTCCTCTTGGTGCAATGTCTGAAAGAAAAAGGCCACGTTGTAGCAATGGTTGGAGTCGGAACAAATGATGTTCCAACTTTGAAAGAAGCTGATGTGGGCATTGCAATTGGAACTTGGAGTAATGGAGCGGCAAGAGAGAGCTCAGACATTATCATCTGGGATAAAAATGTCAGTTTCTTGGTCACCATTATTGGATGTGGAAGATGCATATACTACAACGTTCAAAAGTACATTCAACTGGAGCTCACCATGAATATAGCATGGTTGTTGATAACATCCACAACTACAATGTGTTTGGGACAAAGTGCAATTGCAGCCATCAAATTGGTGTGGGCAAACATGGTTGTGACTCTTCTAGGCGGGCTTGCTCTATTGTTGGAGCCTCCAACAGAGGAACTCATGAAGAAGGCACCAATCAAACGAAATGAATCTCTCATTAGCAAGCCAATGTGGAGAAACATAGTCAGTCAAGCTTTATATCAGACTGTCATTTTGATCACCTTTCAATACAAAGGACCAAGTATCCTAGGCATCAGCAAGAAGGTAAGTGAGTCCATTGTTTTCAACAGTTTTGTTCTGTGCCAAGTATTCAACCAAGTGAATTCAAGGGAACTCGAAAAGAAAAACGTATTTAGGGGCATTTTTCACAATCTGTGGTTTTGGATGGCAGTGGTTGCCACTCTTACCCTGCAGGTGGCTTTTGTTGAGATTGCACACATTGTTGTTGGCAATGCAAGGTTGAATTGGGCACAGTGGGGTATCTGTCTTCTAATTGGGATGGTCTCATGGGCTATTGATCTGGCTGTTAAGTCTGCAACCAGCTTCATACTCAGCTCAGCATCCATTAGTAGGACTATGACACCCTCTAATGTCTCAGAATCCGCTTCTAATCTAGAGCTCCCACTCATTCATGGAAATTCCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1067

Amino Acids

116.11

Weight (kDa)

5.68

Isoelectric Point (pI)

34.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	269 - 361	5.8e-10	P-type ATPase actuator domain
Cation_ATPase	PF13246	565 - 665	5e-09	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	861 - 1028	4.3e-37	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2956
AatII	GACGTC	1 cut(s)	822
Acc36I	ACCTGC	3 cut(s)	316, 1840, 2956
AccB1I	GGYRCC	2 cut(s)	24, 2683
AccB7I	CCANNNNNTGG	1 cut(s)	1180
AccBSI	CCGCTC	2 cut(s)	1669, 2402
AccII	CGCG	1 cut(s)	747
AciI	CCGC	7 cut(s)	269, 633, 1250, 1667, 2402, 2634, 3156
AclI	AACGTT	1 cut(s)	2493
AclWI	GGATC	4 cut(s)	841, 904, 1166, 1474
AcoI	YGGCCR	2 cut(s)	630, 1024
AcsI	RAATTY	5 cut(s)	763, 935, 1276, 2875, 3190
AcuI	CTGAAG	1 cut(s)	575
AcyI	GRCGYC	2 cut(s)	453, 819
AfaI	GTAC	7 cut(s)	132, 306, 596, 679, 849, 2056, 2504
AfiI	CCNNNNNNNGG	9 cut(s)	536, 569, 625, 680, 914, 1180, 1204, 2968, 3123
AflIII	ACRYGT	2 cut(s)	1588, 1851
AhdI	GACNNNNNGTC	1 cut(s)	40
AhlI	ACTAGT	1 cut(s)	248
AjnI	CCWGG	3 cut(s)	502, 907, 1179
AloI	GAACNNNNNNTCC	2 cut(s)	888, 920
Alw21I	GWGCWC	6 cut(s)	544, 1530, 1757, 2417, 2520, 3174
Alw26I	GTCTC	8 cut(s)	48, 90, 183, 324, 778, 2110, 3061, 3151
Alw44I	GTGCAC	2 cut(s)	540, 1526
AlwI	GGATC	4 cut(s)	841, 904, 1166, 1474
AlwNI	CAGNNNCTG	1 cut(s)	908
Ama87I	CYCGRG	2 cut(s)	38, 215
AoxI	GGCC	6 cut(s)	218, 630, 696, 1024, 1428, 2305
ApaLI	GTGCAC	2 cut(s)	540, 1526
ApeKI	GCWGC	4 cut(s)	311, 371, 1650, 2588
ApoI	RAATTY	5 cut(s)	763, 935, 1276, 2875, 3190
ArsI	GACNNNNNNTTYG	6 cut(s)	1485, 1517, 1975, 2007, 2749, 2781
Asp700I	GAANNNNTTC	2 cut(s)	425, 986
AspA2I	CCTAGG	1 cut(s)	2800
AspLEI	GCGC	3 cut(s)	747, 885, 1072
AspS9I	GGNCC	4 cut(s)	218, 696, 1829, 2789
AsuC2I	CCSGG	2 cut(s)	216, 217
AsuHPI	GGTGA	9 cut(s)	266, 884, 923, 944, 1450, 1556, 2449, 2512, 2764
AvaI	CYCGRG	2 cut(s)	38, 215
AvaII	GGWCC	2 cut(s)	1829, 2789
AvrII	CCTAGG	1 cut(s)	2800
BaeGI	GKGCMC	4 cut(s)	27, 544, 1530, 3025
BaeI	ACNNNNGTAYC	2 cut(s)	661, 694
BanI	GGYRCC	2 cut(s)	24, 2683
BanII	GRGCYC	3 cut(s)	2417, 2520, 3174
BauI	CACGAG	1 cut(s)	261
BbsI	GAAGAC	3 cut(s)	1224, 2010, 3032
Bbv12I	GWGCWC	6 cut(s)	544, 1530, 1757, 2417, 2520, 3174
BbvI	GCAGC	4 cut(s)	323, 358, 1662, 2600
BceAI	ACGGC	1 cut(s)	1011
BciT130I	CCWGG	3 cut(s)	504, 909, 1181
BciVI	GTATCC	1 cut(s)	2807
BclI	TGATCA	1 cut(s)	2769
BcnI	CCSGG	2 cut(s)	216, 217
BcoDI	GTCTC	8 cut(s)	48, 90, 183, 324, 778, 2110, 3061, 3151
BcuI	ACTAGT	1 cut(s)	248
BfaI	CTAG	6 cut(s)	249, 1230, 2000, 2630, 2801, 3167
BfmI	CTRYAG	6 cut(s)	294, 309, 375, 792, 900, 2963
BfuAI	ACCTGC	3 cut(s)	316, 1840, 2956
BfuI	GTATCC	1 cut(s)	2807
BisI	GCNGC	6 cut(s)	312, 372, 633, 1651, 2403, 2589
BlnI	CCTAGG	1 cut(s)	2800
BlpI	GCTNAGC	1 cut(s)	3109
BlsI	GCNGC	6 cut(s)	313, 373, 634, 1652, 2404, 2590
Bme1390I	CCNGG	5 cut(s)	216, 217, 504, 909, 1181
Bme18I	GGWCC	2 cut(s)	1829, 2789
BmeRI	GACNNNNNGTC	1 cut(s)	40
BmeT110I	CYCGRG	2 cut(s)	38, 215
BmgT120I	GGNCC	4 cut(s)	218, 696, 1829, 2789
BmiI	GGNNCC	8 cut(s)	26, 697, 799, 1003, 1830, 2276, 2655, 2685
BmrFI	CCNGG	5 cut(s)	216, 217, 504, 909, 1181
BmsI	GCATC	7 cut(s)	247, 256, 370, 1986, 2468, 2814, 3122
BpiI	GAAGAC	3 cut(s)	1224, 2010, 3032
BpmI	CTGGAG	3 cut(s)	351, 1518, 2534
Bpu1102I	GCTNAGC	1 cut(s)	3109
BpuEI	CTTGAG	3 cut(s)	306, 1422, 1940
BpuMI	CCSGG	2 cut(s)	216, 217
BsaAI	YACGTR	1 cut(s)	118
BsaBI	GATNNNNATC	3 cut(s)	339, 1163, 1319
BsaHI	GRCGYC	2 cut(s)	453, 819
BsaI	GGTCTC	4 cut(s)	90, 183, 2110, 3061
BsaJI	CCNNGG	7 cut(s)	214, 215, 457, 502, 1005, 1461, 2800
BsaXI	ACNNNNNCTCC	6 cut(s)	123, 153, 544, 574, 1078, 1108
Bsc4I	CCNNNNNNNGG	9 cut(s)	536, 569, 625, 680, 914, 1180, 1204, 2968, 3123
Bse118I	RCCGGY	2 cut(s)	166, 680
Bse1I	ACTGG	8 cut(s)	28, 78, 107, 442, 1501, 1579, 2106, 2517
Bse3DI	GCAATG	7 cut(s)	786, 1645, 2136, 2294, 2325, 2373, 3010
Bse8I	GATNNNNATC	3 cut(s)	339, 1163, 1319
BseBI	CCWGG	3 cut(s)	504, 909, 1181
BseDI	CCNNGG	7 cut(s)	214, 215, 457, 502, 1005, 1461, 2800
BseJI	GATNNNNATC	3 cut(s)	339, 1163, 1319
BseLI	CCNNNNNNNGG	9 cut(s)	536, 569, 625, 680, 914, 1180, 1204, 2968, 3123
BseMI	GCAATG	7 cut(s)	786, 1645, 2136, 2294, 2325, 2373, 3010
BseMII	CTCAG	8 cut(s)	59, 68, 1977, 2121, 2430, 3118, 3123, 3162
BseNI	ACTGG	8 cut(s)	28, 78, 107, 442, 1501, 1579, 2106, 2517
BseRI	GAGGAG	3 cut(s)	131, 431, 2267
BseSI	GKGCMC	4 cut(s)	27, 544, 1530, 3025
BseXI	GCAGC	4 cut(s)	323, 358, 1662, 2600
BseYI	CCCAGC	1 cut(s)	192
Bsh1236I	CGCG	1 cut(s)	747
Bsh1285I	CGRYCG	1 cut(s)	530
BshFI	GGCC	6 cut(s)	220, 632, 698, 1026, 1430, 2307
BshNI	GGYRCC	2 cut(s)	24, 2683
BsiEI	CGRYCG	1 cut(s)	530
BsiHKAI	GWGCWC	6 cut(s)	544, 1530, 1757, 2417, 2520, 3174
BsiHKCI	CYCGRG	2 cut(s)	38, 215
BsiSI	CCGG	3 cut(s)	167, 216, 681
BslFI	GGGAC	4 cut(s)	304, 1456, 1842, 2586
BslI	CCNNNNNNNGG	9 cut(s)	536, 569, 625, 680, 914, 1180, 1204, 2968, 3123
BsmAI	GTCTC	8 cut(s)	48, 90, 183, 324, 778, 2110, 3061, 3151
BsmBI	CGTCTC	1 cut(s)	324
BsmFI	GGGAC	4 cut(s)	304, 1456, 1842, 2586
BsmI	GAATGC	1 cut(s)	1704
BsnI	GGCC	6 cut(s)	220, 632, 698, 1026, 1430, 2307
Bso31I	GGTCTC	4 cut(s)	90, 183, 2110, 3061
BsoBI	CYCGRG	2 cut(s)	38, 215
Bsp1286I	GDGCHC	8 cut(s)	27, 544, 1530, 1757, 2417, 2520, 3025, 3174
Bsp1407I	TGTACA	1 cut(s)	2054
Bsp1720I	GCTNAGC	1 cut(s)	3109
Bsp19I	CCATGG	1 cut(s)	1461
BspACI	CCGC	7 cut(s)	269, 633, 1250, 1667, 2402, 2634, 3156
BspANI	GGCC	6 cut(s)	220, 632, 698, 1026, 1430, 2307
BspCNI	CTCAG	8 cut(s)	58, 67, 1978, 2120, 2429, 3117, 3122, 3161
BspFNI	CGCG	1 cut(s)	747
BspHI	TCATGA	1 cut(s)	2673
BspLI	GGNNCC	8 cut(s)	26, 697, 799, 1003, 1830, 2276, 2655, 2685
BspMAI	CTGCAG	3 cut(s)	313, 796, 2967
BspMI	ACCTGC	3 cut(s)	316, 1840, 2956
BspPI	GGATC	4 cut(s)	841, 904, 1166, 1474
BspT107I	GGYRCC	2 cut(s)	24, 2683
BspTNI	GGTCTC	4 cut(s)	90, 183, 2110, 3061
BsrBI	CCGCTC	2 cut(s)	1669, 2402
BsrDI	GCAATG	7 cut(s)	786, 1645, 2136, 2294, 2325, 2373, 3010
BsrFI	RCCGGY	2 cut(s)	166, 680
BsrGI	TGTACA	1 cut(s)	2054
BsrI	ACTGG	8 cut(s)	28, 78, 107, 442, 1501, 1579, 2106, 2517
BssAI	RCCGGY	2 cut(s)	166, 680
BssECI	CCNNGG	7 cut(s)	214, 215, 457, 502, 1005, 1461, 2800
BssNI	GRCGYC	2 cut(s)	453, 819
BssSI	CACGAG	1 cut(s)	261
BssT1I	CCWWGG	4 cut(s)	457, 1005, 1461, 2800
Bst2BI	CACGAG	1 cut(s)	261
Bst2UI	CCWGG	3 cut(s)	504, 909, 1181
Bst4CI	ACNGT	6 cut(s)	64, 708, 904, 2761, 2843, 3027
Bst6I	CTCTTC	1 cut(s)	2631
BstACI	GRCGYC	2 cut(s)	453, 819
BstAPI	GCANNNNNTGC	3 cut(s)	266, 401, 2948
BstAUI	TGTACA	1 cut(s)	2054
BstBAI	YACGTR	1 cut(s)	118
BstC8I	GCNNGC	4 cut(s)	393, 2636, 2640, 2717
BstDEI	CTNAG	8 cut(s)	45, 54, 1986, 2107, 2416, 3104, 3109, 3148
BstDSI	CCRYGG	1 cut(s)	1461
BstEII	GGTNACC	1 cut(s)	2455
BstENI	CCTNNNNNAGG	1 cut(s)	567
BstFNI	CGCG	1 cut(s)	747
BstHHI	GCGC	3 cut(s)	747, 885, 1072
BstMAI	GTCTC	8 cut(s)	48, 90, 183, 324, 778, 2110, 3061, 3151
BstMCI	CGRYCG	1 cut(s)	530
BstMWI	GCNNNNNNNGC	7 cut(s)	55, 266, 380, 401, 1647, 2588, 2948
BstNI	CCWGG	3 cut(s)	504, 909, 1181
BstNSI	RCATGY	3 cut(s)	395, 1592, 1855
BstPI	GGTNACC	1 cut(s)	2455
BstSCI	CCNGG	5 cut(s)	214, 215, 502, 907, 1179
BstSFI	CTRYAG	6 cut(s)	294, 309, 375, 792, 900, 2963
BstSLI	GKGCMC	4 cut(s)	27, 544, 1530, 3025
BstUI	CGCG	1 cut(s)	747
BstV1I	GCAGC	4 cut(s)	323, 358, 1662, 2600
BstV2I	GAAGAC	3 cut(s)	1224, 2010, 3032
BstX2I	RGATCY	3 cut(s)	896, 1158, 1466
BstXI	CCANNNNNNTGG	2 cut(s)	2266, 2599
BstYI	RGATCY	3 cut(s)	896, 1158, 1466
BsuI	GTATCC	1 cut(s)	2807
BsuRI	GGCC	6 cut(s)	220, 632, 698, 1026, 1430, 2307
BtgI	CCRYGG	1 cut(s)	1461
BtgZI	GCGATG	2 cut(s)	522, 1948
BtsI	GCAGTG	4 cut(s)	642, 1777, 2027, 2949
BveI	ACCTGC	3 cut(s)	316, 1840, 2956
Cac8I	GCNNGC	4 cut(s)	393, 2636, 2640, 2717
CaiI	CAGNNNCTG	1 cut(s)	908
CciI	TCATGA	1 cut(s)	2673
CfoI	GCGC	3 cut(s)	747, 885, 1072
Cfr10I	RCCGGY	2 cut(s)	166, 680
Cfr13I	GGNCC	4 cut(s)	218, 696, 1829, 2789
Cfr9I	CCCGGG	1 cut(s)	215
CseI	GACGC	2 cut(s)	442, 2233
Csp6I	GTAC	7 cut(s)	131, 305, 595, 678, 848, 2055, 2503
CspCI	CAANNNNNGTGG	2 cut(s)	89, 124
CviQI	GTAC	7 cut(s)	131, 305, 595, 678, 848, 2055, 2503
DdeI	CTNAG	8 cut(s)	45, 54, 1986, 2107, 2416, 3104, 3109, 3148
DriI	GACNNNNNGTC	1 cut(s)	40
EaeI	YGGCCR	2 cut(s)	630, 1024
Eam1104I	CTCTTC	1 cut(s)	2631
Eam1105I	GACNNNNNGTC	1 cut(s)	40
EarI	CTCTTC	1 cut(s)	2631
Ecl136II	GAGCTC	3 cut(s)	2415, 2518, 3172
Eco130I	CCWWGG	4 cut(s)	457, 1005, 1461, 2800
Eco24I	GRGCYC	3 cut(s)	2417, 2520, 3174
Eco31I	GGTCTC	4 cut(s)	90, 183, 2110, 3061
Eco32I	GATATC	1 cut(s)	285
Eco47I	GGWCC	2 cut(s)	1829, 2789
Eco53kI	GAGCTC	3 cut(s)	2415, 2518, 3172
Eco57I	CTGAAG	1 cut(s)	575
Eco88I	CYCGRG	2 cut(s)	38, 215
Eco91I	GGTNACC	1 cut(s)	2455
EcoICRI	GAGCTC	3 cut(s)	2415, 2518, 3172
EcoNI	CCTNNNNNAGG	1 cut(s)	567
EcoO109I	RGGNCCY	1 cut(s)	1829
EcoO65I	GGTNACC	1 cut(s)	2455
EcoRI	GAATTC	1 cut(s)	2875
EcoRII	CCWGG	3 cut(s)	502, 907, 1179
EcoRV	GATATC	1 cut(s)	285
EcoT14I	CCWWGG	4 cut(s)	457, 1005, 1461, 2800
EcoT22I	ATGCAT	1 cut(s)	2483
EcoT38I	GRGCYC	3 cut(s)	2417, 2520, 3174
ErhI	CCWWGG	4 cut(s)	457, 1005, 1461, 2800
Esp3I	CGTCTC	1 cut(s)	324
FaqI	GGGAC	4 cut(s)	304, 1456, 1842, 2586
FauI	CCCGC	2 cut(s)	1674, 2627
FbaI	TGATCA	1 cut(s)	2769
Fnu4HI	GCNGC	6 cut(s)	312, 372, 633, 1651, 2403, 2589
FriOI	GRGCYC	3 cut(s)	2417, 2520, 3174
Fsp4HI	GCNGC	6 cut(s)	312, 372, 633, 1651, 2403, 2589
FspBI	CTAG	6 cut(s)	249, 1230, 2000, 2630, 2801, 3167
GlaI	GCGC	3 cut(s)	746, 884, 1071
GluI	GCNGC	6 cut(s)	312, 372, 633, 1651, 2403, 2589
GsaI	CCCAGC	1 cut(s)	196
GsuI	CTGGAG	3 cut(s)	351, 1518, 2534
HaeIII	GGCC	6 cut(s)	220, 632, 698, 1026, 1430, 2307
HapII	CCGG	3 cut(s)	167, 216, 681
HgaI	GACGC	2 cut(s)	442, 2233
HhaI	GCGC	3 cut(s)	747, 885, 1072
Hin1I	GRCGYC	2 cut(s)	453, 819
Hin6I	GCGC	3 cut(s)	745, 883, 1070
HinP1I	GCGC	3 cut(s)	745, 883, 1070
HincII	GTYRAC	2 cut(s)	817, 2092
HindII	GTYRAC	2 cut(s)	817, 2092
HindIII	AAGCTT	3 cut(s)	1599, 2070, 2745
HpaII	CCGG	3 cut(s)	167, 216, 681
HphI	GGTGA	9 cut(s)	266, 884, 923, 944, 1450, 1556, 2449, 2512, 2764
Hpy166II	GTNNAC	4 cut(s)	542, 817, 1528, 2092
Hpy188III	TCNNGA	9 cut(s)	153, 330, 525, 1422, 1595, 1957, 2078, 2674, 3167
Hpy8I	GTNNAC	4 cut(s)	542, 817, 1528, 2092
HpyCH4III	ACNGT	6 cut(s)	64, 708, 904, 2761, 2843, 3027
HpyCH4IV	ACGT	6 cut(s)	117, 819, 1040, 2310, 2493, 2901
HpyF10VI	GCNNNNNNNGC	7 cut(s)	55, 266, 380, 401, 1647, 2588, 2948
HpyF3I	CTNAG	8 cut(s)	45, 54, 1986, 2107, 2416, 3104, 3109, 3148
HpySE526I	ACGT	6 cut(s)	117, 819, 1040, 2310, 2493, 2901
Hsp92I	GRCGYC	2 cut(s)	453, 819
HspAI	GCGC	3 cut(s)	745, 883, 1070
Ksp22I	TGATCA	1 cut(s)	2769
LmnI	GCTCC	7 cut(s)	591, 1674, 2280, 2399, 2515, 2653, 3177
Lsp1109I	GCAGC	4 cut(s)	323, 358, 1662, 2600
LweI	GCATC	7 cut(s)	247, 256, 370, 1986, 2468, 2814, 3122
MaeI	CTAG	6 cut(s)	249, 1230, 2000, 2630, 2801, 3167
MaeII	ACGT	6 cut(s)	117, 819, 1040, 2310, 2493, 2901
MbiI	CCGCTC	2 cut(s)	1669, 2402
MfeI	CAATTG	3 cut(s)	645, 2379, 2583
MflI	RGATCY	3 cut(s)	896, 1158, 1466
MhlI	GDGCHC	8 cut(s)	27, 544, 1530, 1757, 2417, 2520, 3025, 3174
MlyI	GAGTC	7 cut(s)	46, 50, 440, 1509, 2337, 2617, 2834
MmeI	TCCRAC	6 cut(s)	89, 2305, 2311, 2372, 2631, 2684
Mph1103I	ATGCAT	1 cut(s)	2483
MroXI	GAANNNNTTC	2 cut(s)	425, 986
MseI	TTAA	5 cut(s)	1280, 1920, 2015, 2021, 3081
MslI	CAYNNNNRTG	3 cut(s)	1593, 1866, 2618
MspA1I	CMGCKG	1 cut(s)	49
MspI	CCGG	3 cut(s)	167, 216, 681
MspR9I	CCNGG	5 cut(s)	216, 217, 504, 909, 1181
MunI	CAATTG	3 cut(s)	645, 2379, 2583
Mva1269I	GAATGC	1 cut(s)	1704
MvaI	CCWGG	3 cut(s)	504, 909, 1181
MvnI	CGCG	1 cut(s)	747
MwoI	GCNNNNNNNGC	7 cut(s)	55, 266, 380, 401, 1647, 2588, 2948
NciI	CCSGG	2 cut(s)	216, 217
NcoI	CCATGG	1 cut(s)	1461
NlaIV	GGNNCC	8 cut(s)	26, 697, 799, 1003, 1830, 2276, 2655, 2685
NmuCI	GTSAC	6 cut(s)	872, 1456, 1471, 1570, 2455, 2620
NsiI	ATGCAT	1 cut(s)	2483
NspI	RCATGY	3 cut(s)	395, 1592, 1855
PaeI	GCATGC	1 cut(s)	395
PaeR7I	CTCGAG	1 cut(s)	38
PagI	TCATGA	1 cut(s)	2673
PaqCI	CACCTGC	1 cut(s)	2956
PciI	ACATGT	2 cut(s)	1588, 1851
PctI	GAATGC	1 cut(s)	1704
PdmI	GAANNNNTTC	2 cut(s)	425, 986
PfeI	GAWTC	5 cut(s)	121, 498, 1614, 2702, 3152
PflFI	GACNNNGTC	1 cut(s)	1568
PflMI	CCANNNNNTGG	1 cut(s)	1180
PkrI	GCNGC	6 cut(s)	313, 373, 634, 1652, 2404, 2590
PleI	GAGTC	7 cut(s)	46, 49, 439, 1508, 2336, 2617, 2833
PpsI	GAGTC	7 cut(s)	46, 49, 439, 1508, 2336, 2617, 2833
Ppu21I	YACGTR	1 cut(s)	118
PpuMI	RGGWCCY	1 cut(s)	1829
PscI	ACATGT	2 cut(s)	1588, 1851
Psp124BI	GAGCTC	3 cut(s)	2417, 2520, 3174
Psp1406I	AACGTT	1 cut(s)	2493
Psp5II	RGGWCCY	1 cut(s)	1829
Psp6I	CCWGG	3 cut(s)	502, 907, 1179
PspEI	GGTNACC	1 cut(s)	2455
PspFI	CCCAGC	1 cut(s)	192
PspGI	CCWGG	3 cut(s)	502, 907, 1179
PspN4I	GGNNCC	8 cut(s)	26, 697, 799, 1003, 1830, 2276, 2655, 2685
PspPI	GGNCC	4 cut(s)	218, 696, 1829, 2789
PspPPI	RGGWCCY	1 cut(s)	1829
PspXI	VCTCGAGB	1 cut(s)	38
PstI	CTGCAG	3 cut(s)	313, 796, 2967
PstNI	CAGNNNCTG	1 cut(s)	908
PsuI	RGATCY	3 cut(s)	896, 1158, 1466
PsyI	GACNNNGTC	1 cut(s)	1568
PvuII	CAGCTG	1 cut(s)	49
RsaI	GTAC	7 cut(s)	132, 306, 596, 679, 849, 2056, 2504
RsaNI	GTAC	7 cut(s)	131, 305, 595, 678, 848, 2055, 2503
RseI	CAYNNNNRTG	3 cut(s)	1593, 1866, 2618
SacI	GAGCTC	3 cut(s)	2417, 2520, 3174
SaqAI	TTAA	5 cut(s)	1280, 1920, 2015, 2021, 3081
SatI	GCNGC	6 cut(s)	312, 372, 633, 1651, 2403, 2589
Sau96I	GGNCC	4 cut(s)	218, 696, 1829, 2789
SbfI	CCTGCAGG	1 cut(s)	2967
SchI	GAGTC	7 cut(s)	46, 50, 440, 1509, 2337, 2617, 2834
ScrFI	CCNGG	5 cut(s)	216, 217, 504, 909, 1181
SdaI	CCTGCAGG	1 cut(s)	2967
SduI	GDGCHC	8 cut(s)	27, 544, 1530, 1757, 2417, 2520, 3025, 3174
SfaNI	GCATC	7 cut(s)	247, 256, 370, 1986, 2468, 2814, 3122
SfcI	CTRYAG	6 cut(s)	294, 309, 375, 792, 900, 2963
Sfr274I	CTCGAG	1 cut(s)	38
SinI	GGWCC	2 cut(s)	1829, 2789
SlaI	CTCGAG	1 cut(s)	38
SmaI	CCCGGG	1 cut(s)	217
SmiMI	CAYNNNNRTG	3 cut(s)	1593, 1866, 2618
SmlI	CTYRAG	4 cut(s)	38, 321, 1437, 1955
SmoI	CTYRAG	4 cut(s)	38, 321, 1437, 1955
SpeI	ACTAGT	1 cut(s)	248
SphI	GCATGC	1 cut(s)	395
Sse8387I	CCTGCAGG	1 cut(s)	2967
SsiI	CCGC	7 cut(s)	269, 633, 1250, 1667, 2402, 2634, 3156
SspI	AATATT	2 cut(s)	400, 1845
SspMI	CTAG	6 cut(s)	249, 1230, 2000, 2630, 2801, 3167
SstI	GAGCTC	3 cut(s)	2417, 2520, 3174
StyD4I	CCNGG	5 cut(s)	214, 215, 502, 907, 1179
StyI	CCWWGG	4 cut(s)	457, 1005, 1461, 2800
TaaI	ACNGT	6 cut(s)	64, 708, 904, 2761, 2843, 3027
TaiI	ACGT	6 cut(s)	120, 822, 1043, 2313, 2496, 2904
TaqI	TCGA	7 cut(s)	33, 39, 429, 526, 809, 1994, 2889
TaqII	GACCGA	1 cut(s)	544
TatI	WGTACW	3 cut(s)	594, 2054, 2502
TauI	GCSGC	2 cut(s)	635, 2405
TfiI	GAWTC	5 cut(s)	121, 498, 1614, 2702, 3152
Tru1I	TTAA	5 cut(s)	1280, 1920, 2015, 2021, 3081
Tru9I	TTAA	5 cut(s)	1280, 1920, 2015, 2021, 3081
TseFI	GTSAC	6 cut(s)	872, 1456, 1471, 1570, 2455, 2620
TseI	GCWGC	4 cut(s)	311, 371, 1650, 2588
Tsp45I	GTSAC	6 cut(s)	872, 1456, 1471, 1570, 2455, 2620
TspGWI	ACGGA	2 cut(s)	1187, 1626
TspMI	CCCGGG	1 cut(s)	215
Tth111I	GACNNNGTC	1 cut(s)	1568
Van91I	CCANNNNNTGG	1 cut(s)	1180
VneI	GTGCAC	2 cut(s)	540, 1526
VpaK11BI	GGWCC	2 cut(s)	1829, 2789
XagI	CCTNNNNNAGG	1 cut(s)	567
XapI	RAATTY	5 cut(s)	763, 935, 1276, 2875, 3190
XbaI	TCTAGA	1 cut(s)	3166
XceI	RCATGY	3 cut(s)	395, 1592, 1855
XcmI	CCANNNNNNNNNTGG	3 cut(s)	99, 681, 808
XhoI	CTCGAG	1 cut(s)	38
XmaI	CCCGGG	1 cut(s)	215
XmaJI	CCTAGG	1 cut(s)	2800
XmnI	GAANNNNTTC	2 cut(s)	425, 986
XspI	CTAG	6 cut(s)	249, 1230, 2000, 2630, 2801, 3167
ZraI	GACGTC	1 cut(s)	820
Zsp2I	ATGCAT	1 cut(s)	2483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.