Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

497436 .. 502421

Gene Structure 4986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030901

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

ATGGACATGACAAAGGACAATCCAGGTGGAGTTGATCATAAGGACCTTGAGTCTCAGCAAACAGTGTCAAAAGAGCTTGAACTGGTGCCCATTGATCCTAACCGCCGCTGGCGTACGATTGTGCTGATCCTTCAGGCACGCCATATTTTCATCACCTTAGCAGCTGCTAAAAATCCTGAACTTGGATCTCTTAGAGGAGACTTGGAAGTAAATATAACCCCTGATCCTACACCACCTGAAGGGGTTTACGTCAATGTATATTCCGAGAAATCCAATGACAGTGAATATCAGCTCCAGTCTGACACCATTTCCAACATCATAAAGACAAAGGATTTAACATCCTTACGTGACTTTGGAGGTGCTGAAGCATTTGCACAGGCTTTCGGTAGTGATTTGGAGACTGGAATCTCCACCAACGAAGCTACTTGTTGTCCGCTCAAATGCACCACAAATTCCACTAATTCTGGACAGGCTGCTGCTGCCTGTCCAAGAGGCTTCATTCAGCTAGCCAAAAAGTATTGCAACAGTTACATAATTCTCTTGCTTGTCGTGGTTGCTGTGCTCTCACTTTGCTTTGGAATCGTTGAGGAAGGCCCGACGACTGGTTGGTTTGAAGGGGTCATCATACTTGATGCCATTATCATGCTCGTGGTTCTTCCTTCCATACGTGATTATTGGCGGGAGTCTAAAGGGTTGTCAGGGACGTTAAAACTGTTGGAGAACAGAGATCAAGGGGAGGTTGAGGTCTTACGAGGCGGAAATGAGGAGAAGATCTCCTCATCAGATATTACGTGTGGTGACATCGTGTGCTTGAAGAGAGGACAGCAGGTTCCTGCTGATGGTTTATTCATATCAGGTGGTTTCATAGTCTCGGATGATGAGTTAGGGTCCGTGGTAGTTGATACCAATAACCCTTTTCTCTTCTATGGAGCGGAAGTGATAAATGGCAATGGTCGAATGCTTGTGACATCTGAGGGTGTAAATAACACAGTGTGGGGTGACATGATGCGCAGCATAAACCATTTGAAGACACCATTAGAAGCTCAACTTGACAGGGTGAACACTTGTATACAGATCATTGGTCTCCTAATCTCTATCCTGATCCTTGTGGTGTTGTTCTTACGTTTTGAACTCAAAAAAGAACAGCACACCGGAGGCTCCATGGATCTAAAGGGAGAGCCAACTAAGATGAACATGTTTATGGATGCCATCAAGAAAATTGTCATGAAACCAAGCGGAAAGATTAGTATCTTGACAACTTCTCTCACAATGACGCTGGTTGGGATAGTAGAAGGGTTCCCTTTCTGTATCAACCTAGCCATAATTTACTGGAACAGGAAAGCTTTGAATGGGATGGCCTCCCTTCAACACCAGTTGGCTTGTGTCAACATGGCTTCTGTTACATCTATCTGCACAGACAAAAACGGTGGGCTAACATTGGATTCAATGGAAGTTGACATGTGCTGGATTGGCGAACAAGTTATGGCTGAAAATTCTGTTATAGCCCCACATGTCCTCGAAGCTCTTCGTGATGGAATCAGCATGCTCCTTCTCTCGCAGCCTCCTTGTACCTCAATAGAAGACCCTGTCATTTCCTGGGCGGCACTGACGTTGGGCATGGAATTGGAAATTGTGAGGCAGAGTAATACCATTGTCGAGGACAAAGAATTGGCCACTGATCAGGAAGGAAGAGGAGCAATGATGCGGAAGAACAGAGGTGGTGAAAGAGAAACAATGTACTTGCATTGCAGAGGACCTGCTACAAGTATTTTGCCCATTTGTTCACGCTACCATGACTGTGAAGGGATGATAAAAGTCATCGAAGAACGGAACAGGGTGACTTTTCAGAGAAATGTCGAGGATATGCAGTCCAAGCATCTCAAAACCATGGCCTTTGCGTACAAGGAAATTGATGTCCCAACAATGGTAGAAGAAGATCTAATATTGCTGGGACTGGTTGGTCTGAAGCCAAGTTCGGAAAAGATGAGGGAATCAATCAGAGCCATAAGAAACGCTGGAGTCAATATCATACTGGTTTCCGGAGATAATGTGCAGACACTAGTGAGCATAGCTGAGCATTTCGGAATTCTGGGGGTGCCGAATTCAAATGAGAAGGTGACCACAGGTGAAAAGTTCAGGAATTGCAGTGATATAGAGAGGATGAAGATGGTAAGTGAAATTTCAGTGATGGGAAACTCACTCCCCTCCGACAAGCTTCTTCTGGTTAGGTGTTTGAAGCAAAAAGGGGAAACAGTAGCAGTCATTGGAGTTAAAACGAATGAGGCTCCTGCACTGAAAGAAGCTGATGTTGGACTTGCAATGGGAATATGGACCACCAAAATGACTAAAGCGAGTTCAGACATCATCGTAAGGGTTGCAGATATCAGTTGCCTGGTAAGTATCCTCAGGTATGGGAGATGTGCTTATTACAACATTCAAAAGTACATCCAACTTGAGCTTACTATAGTCGCCTCAGGGCTTTTAGTAACAGTTATCATAGCAGCATCTACAGGAAATATGCCCATAACAAGTATCCAATTGTTCTGGGTAAACCTGGTAGTGCCAATGCTGGGCGGCCTGGCTCTATTGACAGAGCTCCCAAGAAAGAAGTTAATGGAGAAATCACAATCTGGACAAACCAAAGCAATTATTACCATGGCCATGCGCAGAAATATAATAATCCAAGCTTCATATCAAGCTGTGACTATAGTCACCTTCCATTTCAAAGGACAAGCAATCTTGGGTGTCGATGAAAAGGTTCGTAAGACTATCATCTTCAATAGTTTTGTCATCTGCCAGATTTTTAACAAGTTCAGTGCGAGAGAGCTGGTAAAGAAAAATGTTTTTAAGGCGATCCACAAAAGCCAATGGTTTTGGGTGGCTTTGGCTGCAATACTAGTGCTGCAGCTGAGTTTTATTGAGATTTCACATGTGGTTGCTGGTGATGCAAGGCTGAACTTGGTGCACTGGGGTTTCTGCCTTCTTATTGGGATTGTTTCGCTAGGGATGGATATAGCTGCCAAGTGCATATATGAGTACATGTCATCTTTCGTTGACTGGATAATGGGCTGCATATTCAGATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1029

Amino Acids

113.37

Weight (kDa)

6.0

Isoelectric Point (pI)

33.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	244 - 330	9.4e-09	P-type ATPase actuator domain
Cation_ATPase	PF13246	535 - 656	9.8e-09	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	626 - 769	7.1e-08	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	840 - 1008	2.7e-31	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1959
Acc16I	TGCGCA	2 cut(s)	1010, 2666
Acc36I	ACCTGC	2 cut(s)	817, 1765
AccB1I	GGYRCC	2 cut(s)	85, 2095
AccBSI	CCGCTC	2 cut(s)	436, 932
AccI	GTMKAC	1 cut(s)	1069
AccIII	TCCGGA	1 cut(s)	2039
AclWI	GGATC	7 cut(s)	89, 121, 193, 218, 1096, 1173, 2848
AcoI	YGGCCR	2 cut(s)	1671, 2658
AcsI	RAATTY	5 cut(s)	451, 1492, 2085, 2101, 2178
AcuI	CTGAAG	4 cut(s)	116, 258, 384, 1985
AdeI	CACNNNGTG	1 cut(s)	993
AfaI	GTAC	6 cut(s)	115, 1570, 1739, 1901, 2444, 3038
AfiI	CCNNNNNNNGG	6 cut(s)	182, 239, 602, 839, 1924, 2570
AflIII	ACRYGT	6 cut(s)	791, 1194, 1458, 1510, 2929, 3039
AhdI	GACNNNNNGTC	1 cut(s)	49
AhlI	ACTAGT	2 cut(s)	2059, 2896
AjnI	CCWGG	5 cut(s)	22, 1595, 2391, 2553, 2577
AjuI	GAANNNNNNNTTGG	2 cut(s)	2292, 2324
AloI	GAACNNNNNNTCC	2 cut(s)	813, 845
Alw21I	GWGCWC	3 cut(s)	564, 2598, 2967
Alw26I	GTCTC	5 cut(s)	57, 192, 392, 874, 1088
Alw44I	GTGCAC	1 cut(s)	2963
AlwI	GGATC	7 cut(s)	89, 121, 193, 218, 1096, 1173, 2848
Aor13HI	TCCGGA	1 cut(s)	2039
AoxI	GGCC	6 cut(s)	592, 1356, 1671, 1890, 2575, 2658
ApaLI	GTGCAC	1 cut(s)	2963
ApoI	RAATTY	5 cut(s)	451, 1492, 2085, 2101, 2178
Asp700I	GAANNNNTTC	2 cut(s)	1524, 2757
AspLEI	GCGC	2 cut(s)	1011, 2667
AspS9I	GGNCC	5 cut(s)	43, 593, 888, 1754, 2331
AsuNHI	GCTAGC	1 cut(s)	505
AvaII	GGWCC	4 cut(s)	43, 888, 1754, 2331
AxyI	CCTNAGG	2 cut(s)	2405, 2473
BaeGI	GKGCMC	2 cut(s)	90, 2967
BalI	TGGCCA	2 cut(s)	1673, 2660
BanI	GGYRCC	2 cut(s)	85, 2095
BanII	GRGCYC	1 cut(s)	2598
BauI	CACGAG	1 cut(s)	647
BbsI	GAAGAC	2 cut(s)	1034, 1587
Bbv12I	GWGCWC	3 cut(s)	564, 2598, 2967
BccI	CCATC	7 cut(s)	833, 1217, 1348, 1526, 2161, 2182, 3001
BciT130I	CCWGG	5 cut(s)	24, 1597, 2393, 2555, 2579
BciVI	GTATCC	2 cut(s)	2411, 2543
BclI	TGATCA	2 cut(s)	34, 1678
BcoDI	GTCTC	5 cut(s)	57, 192, 392, 874, 1088
BcuI	ACTAGT	2 cut(s)	2059, 2896
BfaI	CTAG	5 cut(s)	506, 1316, 2060, 2897, 3002
BfmI	CTRYAG	4 cut(s)	2463, 2508, 2706, 2903
BfuAI	ACCTGC	2 cut(s)	817, 1765
BfuI	GTATCC	2 cut(s)	2411, 2543
BglII	AGATCT	2 cut(s)	771, 1936
BlpI	GCTNAGC	1 cut(s)	2073
Bme1390I	CCNGG	5 cut(s)	24, 1597, 2393, 2555, 2579
Bme18I	GGWCC	4 cut(s)	43, 888, 1754, 2331
BmeRI	GACNNNNNGTC	1 cut(s)	49
BmgT120I	GGNCC	5 cut(s)	43, 593, 888, 1754, 2331
BmiI	GGNNCC	7 cut(s)	87, 831, 889, 1159, 1298, 2097, 2286
BmrFI	CCNGG	5 cut(s)	24, 1597, 2393, 2555, 2579
BmrI	ACTGGG	1 cut(s)	2977
BmsI	GCATC	7 cut(s)	622, 996, 1195, 1692, 1885, 2513, 2935
BmtI	GCTAGC	1 cut(s)	509
BmuI	ACTGGG	1 cut(s)	2977
BoxI	GACNNNNGTC	1 cut(s)	2708
BpiI	GAAGAC	2 cut(s)	1034, 1587
BplI	GAGNNNNNCTC	2 cut(s)	758, 790
BpmI	CTGGAG	2 cut(s)	278, 2037
Bpu10I	CCTNAGC	1 cut(s)	157
Bpu1102I	GCTNAGC	1 cut(s)	2073
BpuEI	CTTGAG	2 cut(s)	68, 2474
BsaAI	YACGTR	3 cut(s)	347, 668, 792
BsaBI	GATNNNNATC	1 cut(s)	1247
BsaI	GGTCTC	1 cut(s)	1088
BsaJI	CCNNGG	5 cut(s)	891, 1161, 1596, 1887, 2655
BsaWI	WCCGGW	2 cut(s)	1151, 2039
BsaXI	ACNNNNNCTCC	4 cut(s)	921, 951, 2034, 2064
Bsc4I	CCNNNNNNNGG	6 cut(s)	182, 239, 602, 839, 1924, 2570
Bse21I	CCTNAGG	2 cut(s)	2405, 2473
Bse3DI	GCAATG	4 cut(s)	955, 1704, 1744, 2325
Bse8I	GATNNNNATC	1 cut(s)	1247
BseAI	TCCGGA	1 cut(s)	2039
BseBI	CCWGG	5 cut(s)	24, 1597, 2393, 2555, 2579
BseDI	CCNNGG	5 cut(s)	891, 1161, 1596, 1887, 2655
BseGI	GGATG	8 cut(s)	338, 880, 1210, 1359, 1812, 2166, 2445, 3012
BseJI	GATNNNNATC	1 cut(s)	1247
BseLI	CCNNNNNNNGG	6 cut(s)	182, 239, 602, 839, 1924, 2570
BseMI	GCAATG	4 cut(s)	955, 1704, 1744, 2325
BseMII	CTCAG	6 cut(s)	68, 963, 2064, 2419, 2487, 2900
BseRI	GAGGAG	4 cut(s)	210, 766, 779, 1707
BseSI	GKGCMC	2 cut(s)	90, 2967
BseYI	CCCAGC	2 cut(s)	1948, 2569
BsgI	GTGCAG	3 cut(s)	1396, 2072, 2274
BshFI	GGCC	6 cut(s)	594, 1358, 1673, 1892, 2577, 2660
BshNI	GGYRCC	2 cut(s)	85, 2095
BsiHKAI	GWGCWC	3 cut(s)	564, 2598, 2967
BsiSI	CCGG	2 cut(s)	1152, 2040
BsiWI	CGTACG	1 cut(s)	113
BslFI	GGGAC	3 cut(s)	715, 1901, 1965
BslI	CCNNNNNNNGG	6 cut(s)	182, 239, 602, 839, 1924, 2570
BsmAI	GTCTC	5 cut(s)	57, 192, 392, 874, 1088
BsmFI	GGGAC	3 cut(s)	715, 1901, 1965
BsmI	GAATGC	1 cut(s)	963
BsnI	GGCC	6 cut(s)	594, 1358, 1673, 1892, 2577, 2660
Bso31I	GGTCTC	1 cut(s)	1088
Bsp1286I	GDGCHC	4 cut(s)	90, 564, 2598, 2967
Bsp13I	TCCGGA	1 cut(s)	2039
Bsp1720I	GCTNAGC	1 cut(s)	2073
Bsp19I	CCATGG	3 cut(s)	1161, 1887, 2655
BspANI	GGCC	6 cut(s)	594, 1358, 1673, 1892, 2577, 2660
BspCNI	CTCAG	6 cut(s)	67, 964, 2065, 2418, 2486, 2901
BspEI	TCCGGA	1 cut(s)	2039
BspHI	TCATGA	1 cut(s)	1224
BspLI	GGNNCC	7 cut(s)	87, 831, 889, 1159, 1298, 2097, 2286
BspMAI	CTGCAG	1 cut(s)	2907
BspMI	ACCTGC	2 cut(s)	817, 1765
BspOI	GCTAGC	1 cut(s)	509
BspPI	GGATC	7 cut(s)	89, 121, 193, 218, 1096, 1173, 2848
BspQI	GCTCTTC	1 cut(s)	1530
BspT107I	GGYRCC	2 cut(s)	85, 2095
BspTNI	GGTCTC	1 cut(s)	1088
BsrBI	CCGCTC	2 cut(s)	436, 932
BsrDI	GCAATG	4 cut(s)	955, 1704, 1744, 2325
BssECI	CCNNGG	5 cut(s)	891, 1161, 1596, 1887, 2655
BssNAI	GTATAC	1 cut(s)	1070
BssSI	CACGAG	1 cut(s)	647
BssT1I	CCWWGG	3 cut(s)	1161, 1887, 2655
Bst1107I	GTATAC	1 cut(s)	1070
Bst2BI	CACGAG	1 cut(s)	647
Bst2UI	CCWGG	5 cut(s)	24, 1597, 2393, 2555, 2579
Bst4CI	ACNGT	9 cut(s)	64, 281, 527, 714, 991, 1427, 1799, 2254, 2491
Bst6I	CTCTTC	4 cut(s)	809, 926, 1530, 1684
BstBAI	YACGTR	3 cut(s)	347, 668, 792
BstC8I	GCNNGC	4 cut(s)	110, 139, 507, 1544
BstDEI	CTNAG	9 cut(s)	54, 157, 191, 972, 1185, 2073, 2405, 2473, 2909
BstDSI	CCRYGG	4 cut(s)	891, 1161, 1887, 2655
BstEII	GGTNACC	1 cut(s)	2116
BstF5I	GGATG	8 cut(s)	338, 880, 1210, 1359, 1812, 2166, 2445, 3012
BstHHI	GCGC	2 cut(s)	1011, 2667
BstMAI	GTCTC	5 cut(s)	57, 192, 392, 874, 1088
BstMWI	GCNNNNNNNGC	5 cut(s)	479, 1470, 1873, 2888, 2945
BstNI	CCWGG	5 cut(s)	24, 1597, 2393, 2555, 2579
BstNSI	RCATGY	6 cut(s)	1198, 1462, 1514, 1546, 2933, 3043
BstPAI	GACNNNNGTC	1 cut(s)	2708
BstPI	GGTNACC	1 cut(s)	2116
BstSCI	CCNGG	5 cut(s)	22, 1595, 2391, 2553, 2577
BstSFI	CTRYAG	4 cut(s)	2463, 2508, 2706, 2903
BstSLI	GKGCMC	2 cut(s)	90, 2967
BstV2I	GAAGAC	2 cut(s)	1034, 1587
BstX2I	RGATCY	4 cut(s)	185, 771, 1165, 1936
BstYI	RGATCY	4 cut(s)	185, 771, 1165, 1936
BstZ17I	GTATAC	1 cut(s)	1070
Bsu36I	CCTNAGG	2 cut(s)	2405, 2473
BsuI	GTATCC	2 cut(s)	2411, 2543
BsuRI	GGCC	6 cut(s)	594, 1358, 1673, 1892, 2577, 2660
BtgI	CCRYGG	4 cut(s)	891, 1161, 1887, 2655
BtsCI	GGATG	8 cut(s)	338, 880, 1210, 1359, 1812, 2166, 2445, 3012
BtsI	GCAGTG	1 cut(s)	2152
BveI	ACCTGC	2 cut(s)	817, 1765
Cac8I	GCNNGC	4 cut(s)	110, 139, 507, 1544
CciI	TCATGA	1 cut(s)	1224
CfoI	GCGC	2 cut(s)	1011, 2667
Cfr13I	GGNCC	5 cut(s)	43, 593, 888, 1754, 2331
CseI	GACGC	1 cut(s)	1282
CsiI	ACCWGGT	1 cut(s)	2553
Csp6I	GTAC	6 cut(s)	114, 1569, 1738, 1900, 2443, 3037
CspCI	CAANNNNNGTGG	4 cut(s)	7, 42, 1408, 1443
CviQI	GTAC	6 cut(s)	114, 1569, 1738, 1900, 2443, 3037
DdeI	CTNAG	9 cut(s)	54, 157, 191, 972, 1185, 2073, 2405, 2473, 2909
DraIII	CACNNNGTG	1 cut(s)	993
DrdI	GACNNNNNNGTC	1 cut(s)	1959
DriI	GACNNNNNGTC	1 cut(s)	49
DseDI	GACNNNNNNGTC	1 cut(s)	1959
EaeI	YGGCCR	2 cut(s)	1671, 2658
Eam1104I	CTCTTC	4 cut(s)	809, 926, 1530, 1684
Eam1105I	GACNNNNNGTC	1 cut(s)	49
EarI	CTCTTC	4 cut(s)	809, 926, 1530, 1684
EciI	GGCGGA	1 cut(s)	771
Ecl136II	GAGCTC	1 cut(s)	2596
Eco130I	CCWWGG	3 cut(s)	1161, 1887, 2655
Eco24I	GRGCYC	1 cut(s)	2598
Eco31I	GGTCTC	1 cut(s)	1088
Eco32I	GATATC	1 cut(s)	2383
Eco47I	GGWCC	4 cut(s)	43, 888, 1754, 2331
Eco53kI	GAGCTC	1 cut(s)	2596
Eco57I	CTGAAG	4 cut(s)	116, 258, 384, 1985
Eco81I	CCTNAGG	2 cut(s)	2405, 2473
Eco91I	GGTNACC	1 cut(s)	2116
EcoICRI	GAGCTC	1 cut(s)	2596
EcoO109I	RGGNCCY	2 cut(s)	43, 1754
EcoO65I	GGTNACC	1 cut(s)	2116
EcoRI	GAATTC	2 cut(s)	2085, 2101
EcoRII	CCWGG	5 cut(s)	22, 1595, 2391, 2553, 2577
EcoRV	GATATC	1 cut(s)	2383
EcoT14I	CCWWGG	3 cut(s)	1161, 1887, 2655
EcoT38I	GRGCYC	1 cut(s)	2598
ErhI	CCWWGG	3 cut(s)	1161, 1887, 2655
FalI	AAGNNNNNCTT	2 cut(s)	1032, 1064
FaqI	GGGAC	3 cut(s)	715, 1901, 1965
FauI	CCCGC	1 cut(s)	672
FbaI	TGATCA	2 cut(s)	34, 1678
FblI	GTMKAC	1 cut(s)	1069
FokI	GGATG	8 cut(s)	325, 887, 1217, 1366, 1819, 2173, 2432, 3019
FriOI	GRGCYC	1 cut(s)	2598
FspBI	CTAG	5 cut(s)	506, 1316, 2060, 2897, 3002
FspI	TGCGCA	2 cut(s)	1010, 2666
GlaI	GCGC	2 cut(s)	1010, 2666
GsaI	CCCAGC	2 cut(s)	1952, 2573
GsuI	CTGGAG	2 cut(s)	278, 2037
HaeIII	GGCC	6 cut(s)	594, 1358, 1673, 1892, 2577, 2660
HapII	CCGG	2 cut(s)	1152, 2040
HgaI	GACGC	1 cut(s)	1282
HhaI	GCGC	2 cut(s)	1011, 2667
Hin6I	GCGC	2 cut(s)	1009, 2665
HinP1I	GCGC	2 cut(s)	1009, 2665
HincII	GTYRAC	3 cut(s)	1387, 1456, 3055
HindII	GTYRAC	3 cut(s)	1387, 1456, 3055
HindIII	AAGCTT	3 cut(s)	1341, 2213, 2685
HinfI	GANTC	8 cut(s)	50, 405, 579, 683, 1442, 1536, 1991, 2019
HpaII	CCGG	2 cut(s)	1152, 2040
Hpy166II	GTNNAC	9 cut(s)	247, 1060, 1070, 1387, 1456, 1784, 2551, 2965, 3055
Hpy8I	GTNNAC	9 cut(s)	247, 1060, 1070, 1387, 1456, 1784, 2551, 2965, 3055
Hpy99I	CGWCG	1 cut(s)	601
HpyCH4III	ACNGT	9 cut(s)	64, 281, 527, 714, 991, 1427, 1799, 2254, 2491
HpyCH4IV	ACGT	7 cut(s)	249, 346, 667, 704, 791, 1123, 1610
HpyF10VI	GCNNNNNNNGC	5 cut(s)	479, 1470, 1873, 2888, 2945
HpyF3I	CTNAG	9 cut(s)	54, 157, 191, 972, 1185, 2073, 2405, 2473, 2909
HpySE526I	ACGT	7 cut(s)	249, 346, 667, 704, 791, 1123, 1610
HspAI	GCGC	2 cut(s)	1009, 2665
Kpn2I	TCCGGA	1 cut(s)	2039
Ksp22I	TGATCA	2 cut(s)	34, 1678
LguI	GCTCTTC	1 cut(s)	1530
LmnI	GCTCC	7 cut(s)	297, 929, 1163, 1551, 1694, 2290, 2601
LweI	GCATC	7 cut(s)	622, 996, 1195, 1692, 1885, 2513, 2935
MabI	ACCWGGT	1 cut(s)	2553
MaeI	CTAG	5 cut(s)	506, 1316, 2060, 2897, 3002
MaeII	ACGT	7 cut(s)	249, 346, 667, 704, 791, 1123, 1610
MbiI	CCGCTC	2 cut(s)	436, 932
MfeI	CAATTG	1 cut(s)	2537
MflI	RGATCY	4 cut(s)	185, 771, 1165, 1936
MhlI	GDGCHC	4 cut(s)	90, 564, 2598, 2967
MlsI	TGGCCA	2 cut(s)	1673, 2660
MluNI	TGGCCA	2 cut(s)	1673, 2660
MlyI	GAGTC	3 cut(s)	59, 692, 2028
MmeI	TCCRAC	5 cut(s)	336, 696, 2232, 2290, 2473
Mox20I	TGGCCA	2 cut(s)	1673, 2660
MroI	TCCGGA	1 cut(s)	2039
MroXI	GAANNNNTTC	2 cut(s)	1524, 2757
MscI	TGGCCA	2 cut(s)	1673, 2660
MseI	TTAA	7 cut(s)	335, 707, 2271, 2612, 2805, 2847, 3085
MslI	CAYNNNNRTG	6 cut(s)	641, 647, 1199, 1797, 2339, 2660
Msp20I	TGGCCA	2 cut(s)	1673, 2660
MspA1I	CMGCKG	3 cut(s)	108, 164, 2908
MspI	CCGG	2 cut(s)	1152, 2040
MspR9I	CCNGG	5 cut(s)	24, 1597, 2393, 2555, 2579
MunI	CAATTG	1 cut(s)	2537
Mva1269I	GAATGC	1 cut(s)	963
MvaI	CCWGG	5 cut(s)	24, 1597, 2393, 2555, 2579
MwoI	GCNNNNNNNGC	5 cut(s)	479, 1470, 1873, 2888, 2945
NcoI	CCATGG	3 cut(s)	1161, 1887, 2655
NheI	GCTAGC	1 cut(s)	505
NlaIV	GGNNCC	7 cut(s)	87, 831, 889, 1159, 1298, 2097, 2286
NmuCI	GTSAC	8 cut(s)	347, 797, 964, 998, 1837, 2116, 2701, 2710
NsbI	TGCGCA	2 cut(s)	1010, 2666
NspI	RCATGY	6 cut(s)	1198, 1462, 1514, 1546, 2933, 3043
PaeI	GCATGC	1 cut(s)	1546
PagI	TCATGA	1 cut(s)	1224
PciI	ACATGT	5 cut(s)	1194, 1458, 1510, 2929, 3039
PciSI	GCTCTTC	1 cut(s)	1530
PctI	GAATGC	1 cut(s)	963
PdmI	GAANNNNTTC	2 cut(s)	1524, 2757
PfeI	GAWTC	5 cut(s)	405, 579, 1442, 1536, 1991
Pfl23II	CGTACG	1 cut(s)	113
PflFI	GACNNNGTC	1 cut(s)	1586
PleI	GAGTC	3 cut(s)	58, 691, 2027
PpsI	GAGTC	3 cut(s)	58, 691, 2027
Ppu21I	YACGTR	3 cut(s)	347, 668, 792
PpuMI	RGGWCCY	2 cut(s)	43, 1754
PscI	ACATGT	5 cut(s)	1194, 1458, 1510, 2929, 3039
PshAI	GACNNNNGTC	1 cut(s)	2708
Psp124BI	GAGCTC	1 cut(s)	2598
Psp5II	RGGWCCY	2 cut(s)	43, 1754
Psp6I	CCWGG	5 cut(s)	22, 1595, 2391, 2553, 2577
PspEI	GGTNACC	1 cut(s)	2116
PspFI	CCCAGC	2 cut(s)	1948, 2569
PspGI	CCWGG	5 cut(s)	22, 1595, 2391, 2553, 2577
PspLI	CGTACG	1 cut(s)	113
PspN4I	GGNNCC	7 cut(s)	87, 831, 889, 1159, 1298, 2097, 2286
PspPI	GGNCC	5 cut(s)	43, 593, 888, 1754, 2331
PspPPI	RGGWCCY	2 cut(s)	43, 1754
PstI	CTGCAG	1 cut(s)	2907
PsuI	RGATCY	4 cut(s)	185, 771, 1165, 1936
PsyI	GACNNNGTC	1 cut(s)	1586
PvuII	CAGCTG	2 cut(s)	164, 2908
RsaI	GTAC	6 cut(s)	115, 1570, 1739, 1901, 2444, 3038
RsaNI	GTAC	6 cut(s)	114, 1569, 1738, 1900, 2443, 3037
RseI	CAYNNNNRTG	6 cut(s)	641, 647, 1199, 1797, 2339, 2660
SacI	GAGCTC	1 cut(s)	2598
SapI	GCTCTTC	1 cut(s)	1530
SaqAI	TTAA	7 cut(s)	335, 707, 2271, 2612, 2805, 2847, 3085
Sau96I	GGNCC	5 cut(s)	43, 593, 888, 1754, 2331
SchI	GAGTC	3 cut(s)	59, 692, 2028
ScrFI	CCNGG	5 cut(s)	24, 1597, 2393, 2555, 2579
SduI	GDGCHC	4 cut(s)	90, 564, 2598, 2967
SexAI	ACCWGGT	1 cut(s)	2553
SfaNI	GCATC	7 cut(s)	622, 996, 1195, 1692, 1885, 2513, 2935
SfcI	CTRYAG	4 cut(s)	2463, 2508, 2706, 2903
SinI	GGWCC	4 cut(s)	43, 888, 1754, 2331
SmiMI	CAYNNNNRTG	6 cut(s)	641, 647, 1199, 1797, 2339, 2660
SmlI	CTYRAG	2 cut(s)	47, 2453
SmoI	CTYRAG	2 cut(s)	47, 2453
SpeI	ACTAGT	2 cut(s)	2059, 2896
SphI	GCATGC	1 cut(s)	1546
SspI	AATATT	1 cut(s)	1944
SspMI	CTAG	5 cut(s)	506, 1316, 2060, 2897, 3002
SstI	GAGCTC	1 cut(s)	2598
StyD4I	CCNGG	5 cut(s)	22, 1595, 2391, 2553, 2577
StyI	CCWWGG	3 cut(s)	1161, 1887, 2655
TaaI	ACNGT	9 cut(s)	64, 281, 527, 714, 991, 1427, 1799, 2254, 2491
TaiI	ACGT	7 cut(s)	252, 349, 670, 707, 794, 1126, 1613
TaqI	TCGA	6 cut(s)	955, 1518, 1656, 1821, 1857, 2748
TatI	WGTACW	3 cut(s)	1737, 2442, 3036
TauI	GCSGC	3 cut(s)	108, 1604, 2577
TfiI	GAWTC	5 cut(s)	405, 579, 1442, 1536, 1991
Tru1I	TTAA	7 cut(s)	335, 707, 2271, 2612, 2805, 2847, 3085
Tru9I	TTAA	7 cut(s)	335, 707, 2271, 2612, 2805, 2847, 3085
TseFI	GTSAC	8 cut(s)	347, 797, 964, 998, 1837, 2116, 2701, 2710
Tsp45I	GTSAC	8 cut(s)	347, 797, 964, 998, 1837, 2116, 2701, 2710
TspDTI	ATGAA	9 cut(s)	139, 487, 838, 853, 1205, 1241, 2177, 2679, 2766
TspGWI	ACGGA	2 cut(s)	880, 1843
Tth111I	GACNNNGTC	1 cut(s)	1586
VneI	GTGCAC	1 cut(s)	2963
VpaK11BI	GGWCC	4 cut(s)	43, 888, 1754, 2331
XapI	RAATTY	5 cut(s)	451, 1492, 2085, 2101, 2178
XceI	RCATGY	6 cut(s)	1198, 1462, 1514, 1546, 2933, 3043
XmiI	GTMKAC	1 cut(s)	1069
XmnI	GAANNNNTTC	2 cut(s)	1524, 2757
XspI	CTAG	5 cut(s)	506, 1316, 2060, 2897, 3002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.