Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Forward (+)

17217020 .. 17231698

Gene Structure 14679 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG177100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGGGAGTTCTGGTGAAGTCGACCTTGAGAATCAACAAACGGTTCCCCGTGTGGCGACTGATCGTGGAGGCGGCTGGCTAACTAGTCTCTTGAATGTAATTCATTCATTTTGCCAGTTTCTGATCATAAAACCTTCTTCTGCTGATGATGAAAGTGAGGAACTGGAACTTACCAGAACTACACACCTTGCATCTGCATCACCTCACGTTTCTAAAGCAGTATCAAGTTTGAGCGTGGAGGATGATGGTACCATCACTAGTACTGCTACCGTTTCTGACCAAGTGAATCTGAACATTGAGAATGATATTACTACCAGGATTGCTAATGAGGCTAAGATCCAGCATGCAAATGTTTCCAAGATAGTAAAGGAGAAGGACTTCGCTACCTTACAGAAGTTTGGAGGCATCAAAGGAATTGCAGAGGCACTCAGTACAGATTTACACAGTGGAATCCCAGGTGATGAACAAGATCTTCATGATCGACACAGTGCAGTAGTCTCAACAACACAGGCTCCAACTCCAAGCTTCTTTAAACTTCTCCGACAATCTTGTTTCGATTGGACCGTTTTCCTTCTCTTCGTGTGTGTCATCCTGTCAACTGTATTTGGTATCCAGCAGGAAGGCCCAAGTAATGGTTGGCTTGAAGGAGCTGTCGGAATGTTTGCGATCATCATACTTGTGGTTGTACCTACAATGGGCAAGTATTTCTCCATGCCGCATCCCAGGAATACTAATCAAATGAAAACTAAGGTCCGCAGAGGAGGAAACCTGCTTCATATCTCCCCATCGGATGTTGTGCCAGGTGACATAGTATGCTTGGAATTGGGATCTCTAGTTCCTGCTGATGGTTTGTTCGTTTCGACTGGTGAATCCTTAGTGTTGGAAGATGGTATGAAATTTCCAACCGTCGATGACAGCAATCCTTTTCTGGTTTATGGTGCAAGGGTGGTTAATGAGTACCCTGGCCTCCAAGCTGATCAGTTCAAGGCTAAAACAACTGCAAGCGAGGAGCTAATCAATCCTGTTCTTGAAGTCGACGTGAGCTGTGATGGGGATCAAATCACCGATACAGAGAGTGTTGCTGGTATTGACAAACACGTTCGTGAAGCTTTGTACAAAGGAATTAGCACACCACTTTTGATGCCTTCAAGCCCTTGTAGCTCAACAGAACACCGGGTCCTGCTACCGTGGGCCAAATCTAATTTGGGTATGGACAATGAGAATTTATTGCAAAATTGCACCATTGTGGGGAGCGAAAAGTTGAGCACCGATGAGGAGGCTAGTAGAGTTCTGATGAAGGACAGTGAAACTGGAGATATGTGCTTTTATTGGAATGGACCTGCAACAACAATATTGCCCATGTGTTCCGAATACTATGACAGCAAGGGGACAACAAAGCTCATGGATGAACAGAAGAAACGTGATTTTAAAGAAATTATGGGGAACATGCAGTCCAAACATCTCAAGACCATTGCATTTGCGTACAAGAAGATTGATGCTCTAATGCCTGAAGAAGGCAACAGCTTAATATTGATAGGACTGCTAGGTGTGAAGTGTTGCACTGAGACAATGGAAGCACCGGAAGTTCTACAAAAAGCGGGAGTGGAAATCATCCAGTTCGCAAAAGATAATGAATTTCCGGCATCGAAACCGGCCAGATTTCAACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

556

Amino Acids

60.69

Weight (kDa)

4.92

Isoelectric Point (pI)

39.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	245 - 290	1.4e-06	P-type ATPase actuator domain
Cation_ATPase	PF13246	402 - 516	1.3e-07	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	777, 1348
Acc65I	GGTACC	1 cut(s)	248
AccB1I	GGYRCC	1 cut(s)	248
AccB7I	CCANNNNNTGG	1 cut(s)	632
AccI	GTMKAC	2 cut(s)	21, 1035
AciI	CCGC	4 cut(s)	72, 716, 754, 1598
AclWI	GGATC	3 cut(s)	331, 835, 1062
AcoI	YGGCCR	1 cut(s)	1653
AcsI	RAATTY	3 cut(s)	896, 1222, 1634
AcuI	CTGAAG	1 cut(s)	1530
AfaI	GTAC	7 cut(s)	250, 262, 433, 687, 959, 1115, 1484
AfiI	CCNNNNNNNGG	5 cut(s)	632, 695, 845, 1248, 1514
AflIII	ACRYGT	1 cut(s)	1096
AgsI	TTSAA	6 cut(s)	94, 644, 985, 1031, 1149, 1664
AhlI	ACTAGT	2 cut(s)	83, 257
AjiI	CACGTC	1 cut(s)	1039
AjnI	CCWGG	5 cut(s)	314, 454, 722, 799, 961
AleI	CACNNNNGTG	2 cut(s)	1101, 1244
AloI	GAACNNNNNNTCC	6 cut(s)	819, 851, 1161, 1193, 1436, 1468
AluBI	AGCT	9 cut(s)	525, 650, 974, 1012, 1044, 1109, 1161, 1399, 1524
AluI	AGCT	9 cut(s)	525, 650, 974, 1012, 1044, 1109, 1161, 1399, 1524
Alw21I	GWGCWC	1 cut(s)	1268
Alw26I	GTCTC	3 cut(s)	92, 502, 1559
AlwI	GGATC	3 cut(s)	331, 835, 1062
AlwNI	CAGNNNCTG	1 cut(s)	121
AoxI	GGCC	4 cut(s)	622, 964, 1191, 1653
ApoI	RAATTY	3 cut(s)	896, 1222, 1634
Asp700I	GAANNNNTTC	1 cut(s)	377
Asp718I	GGTACC	1 cut(s)	248
AspS9I	GGNCC	6 cut(s)	561, 623, 751, 1177, 1191, 1337
AsuC2I	CCSGG	1 cut(s)	1175
AsuHPI	GGTGA	6 cut(s)	26, 192, 470, 815, 878, 1054
AvaII	GGWCC	4 cut(s)	561, 751, 1177, 1337
BanI	GGYRCC	1 cut(s)	248
Bbv12I	GWGCWC	1 cut(s)	1268
BccI	CCATC	6 cut(s)	239, 260, 793, 839, 881, 1043
BciT130I	CCWGG	5 cut(s)	316, 456, 724, 801, 963
BciVI	GTATCC	1 cut(s)	620
BclI	TGATCA	2 cut(s)	123, 976
BcnI	CCSGG	1 cut(s)	1175
BcoDI	GTCTC	3 cut(s)	92, 502, 1559
BcuI	ACTAGT	2 cut(s)	83, 257
BfaI	CTAG	5 cut(s)	84, 258, 833, 1281, 1544
BfuAI	ACCTGC	2 cut(s)	777, 1348
BfuI	GTATCC	1 cut(s)	620
BglII	AGATCT	1 cut(s)	469
BisI	GCNGC	2 cut(s)	73, 716
BlsI	GCNGC	2 cut(s)	74, 717
BmcAI	AGTACT	1 cut(s)	262
Bme1390I	CCNGG	6 cut(s)	316, 456, 724, 801, 963, 1175
Bme18I	GGWCC	4 cut(s)	561, 751, 1177, 1337
BmgBI	CACGTC	1 cut(s)	1039
BmgT120I	GGNCC	6 cut(s)	561, 623, 751, 1177, 1191, 1337
BmiI	GGNNCC	4 cut(s)	45, 250, 513, 1178
BmrFI	CCNGG	6 cut(s)	316, 456, 724, 801, 963, 1175
BmsI	GCATC	7 cut(s)	200, 206, 414, 727, 1131, 1486, 1652
BpmI	CTGGAG	1 cut(s)	1332
BpuEI	CTTGAG	2 cut(s)	47, 1448
BpuMI	CCSGG	1 cut(s)	1175
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaJI	CCNNGG	4 cut(s)	454, 722, 961, 1187
BsaWI	WCCGGW	1 cut(s)	1579
BsaXI	ACNNNNNCTCC	3 cut(s)	28, 496, 526
Bsc4I	CCNNNNNNNGG	5 cut(s)	632, 695, 845, 1248, 1514
Bse118I	RCCGGY	1 cut(s)	1651
Bse1I	ACTGG	5 cut(s)	115, 168, 868, 1315, 1615
Bse3DI	GCAATG	1 cut(s)	1470
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	5 cut(s)	316, 456, 724, 801, 963
BseDI	CCNNGG	4 cut(s)	454, 722, 961, 1187
BseGI	GGATG	6 cut(s)	247, 588, 718, 796, 1411, 1611
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	5 cut(s)	632, 695, 845, 1248, 1514
BseMI	GCAATG	1 cut(s)	1470
BseMII	CTCAG	2 cut(s)	442, 1554
BseNI	ACTGG	5 cut(s)	115, 168, 868, 1315, 1615
BseRI	GAGGAG	3 cut(s)	774, 1022, 1289
BsgI	GTGCAG	1 cut(s)	510
BshFI	GGCC	4 cut(s)	624, 966, 1193, 1655
BshNI	GGYRCC	1 cut(s)	248
BsiHKAI	GWGCWC	1 cut(s)	1268
BsiSI	CCGG	4 cut(s)	1174, 1580, 1640, 1652
BslFI	GGGAC	1 cut(s)	1402
BslI	CCNNNNNNNGG	5 cut(s)	632, 695, 845, 1248, 1514
BsmAI	GTCTC	3 cut(s)	92, 502, 1559
BsmFI	GGGAC	1 cut(s)	1402
BsnI	GGCC	4 cut(s)	624, 966, 1193, 1655
Bsp1286I	GDGCHC	1 cut(s)	1268
Bsp1407I	TGTACA	1 cut(s)	1113
Bsp143I	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
BspACI	CCGC	4 cut(s)	72, 716, 754, 1598
BspANI	GGCC	4 cut(s)	624, 966, 1193, 1655
BspCNI	CTCAG	2 cut(s)	441, 1555
BspHI	TCATGA	1 cut(s)	475
BspLI	GGNNCC	4 cut(s)	45, 250, 513, 1178
BspMI	ACCTGC	2 cut(s)	777, 1348
BspPI	GGATC	3 cut(s)	331, 835, 1062
BspT107I	GGYRCC	1 cut(s)	248
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	1 cut(s)	1651
BsrGI	TGTACA	1 cut(s)	1113
BsrI	ACTGG	5 cut(s)	115, 168, 868, 1315, 1615
BssAI	RCCGGY	1 cut(s)	1651
BssECI	CCNNGG	4 cut(s)	454, 722, 961, 1187
BssMI	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
Bst2UI	CCWGG	5 cut(s)	316, 456, 724, 801, 963
Bst4CI	ACNGT	9 cut(s)	43, 271, 446, 488, 565, 601, 907, 1188, 1304
Bst6I	CTCTTC	1 cut(s)	581
BstAUI	TGTACA	1 cut(s)	1113
BstC8I	GCNNGC	3 cut(s)	77, 345, 1003
BstDEI	CTNAG	5 cut(s)	333, 428, 747, 874, 1563
BstDSI	CCRYGG	1 cut(s)	1187
BstENI	CCTNNNNNAGG	1 cut(s)	1512
BstF5I	GGATG	6 cut(s)	247, 588, 718, 796, 1411, 1611
BstKTI	GATC	9 cut(s)	64, 126, 339, 472, 481, 669, 830, 979, 1057
BstMAI	GTCTC	3 cut(s)	92, 502, 1559
BstMBI	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
BstMWI	GCNNNNNNNGC	2 cut(s)	329, 1158
BstNI	CCWGG	5 cut(s)	316, 456, 724, 801, 963
BstNSI	RCATGY	2 cut(s)	347, 1450
BstSCI	CCNGG	6 cut(s)	314, 454, 722, 799, 961, 1173
BstX2I	RGATCY	3 cut(s)	336, 469, 827
BstYI	RGATCY	3 cut(s)	336, 469, 827
BsuI	GTATCC	1 cut(s)	620
BsuRI	GGCC	4 cut(s)	624, 966, 1193, 1655
BtgI	CCRYGG	1 cut(s)	1187
BtrI	CACGTC	1 cut(s)	1039
BtsCI	GGATG	6 cut(s)	247, 588, 718, 796, 1411, 1611
BtsIMutI	CAGTG	5 cut(s)	451, 493, 1309, 1560, 1666
BveI	ACCTGC	2 cut(s)	777, 1348
Cac8I	GCNNGC	3 cut(s)	77, 345, 1003
CaiI	CAGNNNCTG	1 cut(s)	121
CciI	TCATGA	1 cut(s)	475
Cfr10I	RCCGGY	1 cut(s)	1651
Cfr13I	GGNCC	6 cut(s)	561, 623, 751, 1177, 1191, 1337
Csp6I	GTAC	7 cut(s)	249, 261, 432, 686, 958, 1114, 1483
CviAII	CATG	6 cut(s)	344, 476, 712, 1360, 1402, 1447
CviQI	GTAC	7 cut(s)	249, 261, 432, 686, 958, 1114, 1483
DdeI	CTNAG	5 cut(s)	333, 428, 747, 874, 1563
DpnI	GATC	9 cut(s)	63, 125, 338, 471, 480, 668, 829, 978, 1056
DpnII	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
DraI	TTTAAA	2 cut(s)	532, 1429
EaeI	YGGCCR	1 cut(s)	1653
Eam1104I	CTCTTC	1 cut(s)	581
EarI	CTCTTC	1 cut(s)	581
Eco47I	GGWCC	4 cut(s)	561, 751, 1177, 1337
Eco57I	CTGAAG	1 cut(s)	1530
EcoNI	CCTNNNNNAGG	1 cut(s)	1512
EcoO109I	RGGNCCY	1 cut(s)	1177
EcoRII	CCWGG	5 cut(s)	314, 454, 722, 799, 961
FaeI	CATG	6 cut(s)	347, 479, 715, 1363, 1405, 1450
FalI	AAGNNNNNCTT	2 cut(s)	9, 41
FaqI	GGGAC	1 cut(s)	1402
FatI	CATG	6 cut(s)	343, 475, 711, 1359, 1401, 1446
FauI	CCCGC	1 cut(s)	1591
FbaI	TGATCA	2 cut(s)	123, 976
FblI	GTMKAC	2 cut(s)	21, 1035
Fnu4HI	GCNGC	2 cut(s)	73, 716
FokI	GGATG	6 cut(s)	254, 575, 705, 803, 1418, 1598
Fsp4HI	GCNGC	2 cut(s)	73, 716
FspBI	CTAG	5 cut(s)	84, 258, 833, 1281, 1544
GluI	GCNGC	2 cut(s)	73, 716
GsuI	CTGGAG	1 cut(s)	1332
HaeIII	GGCC	4 cut(s)	624, 966, 1193, 1655
HapII	CCGG	4 cut(s)	1174, 1580, 1640, 1652
Hin1II	CATG	6 cut(s)	347, 479, 715, 1363, 1405, 1450
HincII	GTYRAC	3 cut(s)	22, 597, 1036
HindII	GTYRAC	3 cut(s)	22, 597, 1036
HindIII	AAGCTT	2 cut(s)	523, 1107
HinfI	GANTC	4 cut(s)	31, 286, 450, 869
HpaII	CCGG	4 cut(s)	1174, 1580, 1640, 1652
HphI	GGTGA	6 cut(s)	26, 192, 470, 815, 878, 1054
Hpy166II	GTNNAC	3 cut(s)	22, 597, 1036
Hpy188I	TCNGA	8 cut(s)	123, 277, 291, 542, 656, 790, 1293, 1369
Hpy188III	TCNNGA	5 cut(s)	91, 476, 1028, 1103, 1465
Hpy8I	GTNNAC	3 cut(s)	22, 597, 1036
Hpy99I	CGWCG	2 cut(s)	911, 1040
HpyAV	CCTTC	8 cut(s)	144, 367, 581, 614, 638, 1155, 1291, 1508
HpyCH4III	ACNGT	9 cut(s)	43, 271, 446, 488, 565, 601, 907, 1188, 1304
HpyCH4IV	ACGT	4 cut(s)	207, 1038, 1098, 1420
HpyF10VI	GCNNNNNNNGC	2 cut(s)	329, 1158
HpyF3I	CTNAG	5 cut(s)	333, 428, 747, 874, 1563
HpySE526I	ACGT	4 cut(s)	207, 1038, 1098, 1420
Hsp92II	CATG	6 cut(s)	347, 479, 715, 1363, 1405, 1450
KpnI	GGTACC	1 cut(s)	252
Ksp22I	TGATCA	2 cut(s)	123, 976
Kzo9I	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
LmnI	GCTCC	4 cut(s)	517, 647, 1009, 1251
LweI	GCATC	7 cut(s)	200, 206, 414, 727, 1131, 1486, 1652
MaeI	CTAG	5 cut(s)	84, 258, 833, 1281, 1544
MaeII	ACGT	4 cut(s)	207, 1038, 1098, 1420
MaeIII	GTNAC	1 cut(s)	803
MalI	GATC	9 cut(s)	63, 125, 338, 471, 480, 668, 829, 978, 1056
MboI	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
MboII	GAAGA	7 cut(s)	129, 464, 568, 896, 1426, 1501, 1523
MflI	RGATCY	3 cut(s)	336, 469, 827
MhlI	GDGCHC	1 cut(s)	1268
MmeI	TCCRAC	5 cut(s)	539, 565, 634, 861, 926
MroXI	GAANNNNTTC	1 cut(s)	377
MseI	TTAA	4 cut(s)	531, 951, 1428, 1526
MslI	CAYNNNNRTG	4 cut(s)	348, 677, 1101, 1244
MspI	CCGG	4 cut(s)	1174, 1580, 1640, 1652
MspR9I	CCNGG	6 cut(s)	316, 456, 724, 801, 963, 1175
MvaI	CCWGG	5 cut(s)	316, 456, 724, 801, 963
MwoI	GCNNNNNNNGC	2 cut(s)	329, 1158
NciI	CCSGG	1 cut(s)	1175
NdeII	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
NlaIII	CATG	6 cut(s)	347, 479, 715, 1363, 1405, 1450
NlaIV	GGNNCC	4 cut(s)	45, 250, 513, 1178
NmuCI	GTSAC	1 cut(s)	803
NspI	RCATGY	2 cut(s)	347, 1450
OliI	CACNNNNGTG	2 cut(s)	1101, 1244
PaeI	GCATGC	1 cut(s)	347
PagI	TCATGA	1 cut(s)	475
PcsI	WCGNNNNNNNCGW	1 cut(s)	561
PdmI	GAANNNNTTC	1 cut(s)	377
PfeI	GAWTC	4 cut(s)	31, 286, 450, 869
PflMI	CCANNNNNTGG	1 cut(s)	632
PkrI	GCNGC	2 cut(s)	74, 717
PpuMI	RGGWCCY	1 cut(s)	1177
Psp5II	RGGWCCY	1 cut(s)	1177
Psp6I	CCWGG	5 cut(s)	314, 454, 722, 799, 961
PspGI	CCWGG	5 cut(s)	314, 454, 722, 799, 961
PspN4I	GGNNCC	4 cut(s)	45, 250, 513, 1178
PspPI	GGNCC	6 cut(s)	561, 623, 751, 1177, 1191, 1337
PspPPI	RGGWCCY	1 cut(s)	1177
PstNI	CAGNNNCTG	1 cut(s)	121
PsuI	RGATCY	3 cut(s)	336, 469, 827
RsaI	GTAC	7 cut(s)	250, 262, 433, 687, 959, 1115, 1484
RsaNI	GTAC	7 cut(s)	249, 261, 432, 686, 958, 1114, 1483
RseI	CAYNNNNRTG	4 cut(s)	348, 677, 1101, 1244
SalI	GTCGAC	2 cut(s)	20, 1034
SaqAI	TTAA	4 cut(s)	531, 951, 1428, 1526
SatI	GCNGC	2 cut(s)	73, 716
Sau3AI	GATC	9 cut(s)	61, 123, 336, 469, 478, 666, 827, 976, 1054
Sau96I	GGNCC	6 cut(s)	561, 623, 751, 1177, 1191, 1337
ScaI	AGTACT	1 cut(s)	262
ScrFI	CCNGG	6 cut(s)	316, 456, 724, 801, 963, 1175
SduI	GDGCHC	1 cut(s)	1268
SfaNI	GCATC	7 cut(s)	200, 206, 414, 727, 1131, 1486, 1652
SinI	GGWCC	4 cut(s)	561, 751, 1177, 1337
SmiMI	CAYNNNNRTG	4 cut(s)	348, 677, 1101, 1244
SmlI	CTYRAG	2 cut(s)	26, 1463
SmoI	CTYRAG	2 cut(s)	26, 1463
SpeI	ACTAGT	2 cut(s)	83, 257
SphI	GCATGC	1 cut(s)	347
SsiI	CCGC	4 cut(s)	72, 716, 754, 1598
SspI	AATATT	2 cut(s)	1353, 1530
SspMI	CTAG	5 cut(s)	84, 258, 833, 1281, 1544
StyD4I	CCNGG	6 cut(s)	314, 454, 722, 799, 961, 1173
TaaI	ACNGT	9 cut(s)	43, 271, 446, 488, 565, 601, 907, 1188, 1304
TaiI	ACGT	4 cut(s)	210, 1041, 1101, 1423
TaqI	TCGA	7 cut(s)	21, 481, 555, 860, 909, 1035, 1646
TatI	WGTACW	3 cut(s)	260, 431, 1113
TauI	GCSGC	2 cut(s)	75, 718
TfiI	GAWTC	4 cut(s)	31, 286, 450, 869
Tru1I	TTAA	4 cut(s)	531, 951, 1428, 1526
Tru9I	TTAA	4 cut(s)	531, 951, 1428, 1526
TscAI	CASTG	4 cut(s)	451, 493, 1309, 1567
TseFI	GTSAC	1 cut(s)	803
Tsp45I	GTSAC	1 cut(s)	803
TspRI	CASTG	4 cut(s)	451, 493, 1309, 1567
Van91I	CCANNNNNTGG	1 cut(s)	632
VpaK11BI	GGWCC	4 cut(s)	561, 751, 1177, 1337
XagI	CCTNNNNNAGG	1 cut(s)	1512
XapI	RAATTY	3 cut(s)	896, 1222, 1634
XceI	RCATGY	2 cut(s)	347, 1450
XcmI	CCANNNNNNNNNTGG	2 cut(s)	633, 1201
XmiI	GTMKAC	2 cut(s)	21, 1035
XmnI	GAANNNNTTC	1 cut(s)	377
XspI	CTAG	5 cut(s)	84, 258, 833, 1281, 1544
ZrmI	AGTACT	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.