Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

478216 .. 480207

Gene Structure 1992 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28238

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGACAGACATCGCAAGCCCTGTGCACCAGTTCGACCTCGAGTCTCAGCATACAGTGTTGCTGAAAACCAGTAGTACTAACCCACCAATAGACCACTGGCGCTGGATTTATGTGATTCTCCAAGTGCGCAAACTCGTGAAAATCCTCATCCCATCCAGAGCCAACAAACCTAAAAACGGGTCTCAACCACCTCACCACCTCTCATTAGCTACAATCCCTTATGCTATTATCAGCACTAGCACTACTACTGGTGATGCAAGAGATGCGGACTTGCAACTGACATCAGGGACTACAGAAATCTTACCTGCCTCGCCTCAATTTTCTGGAAATGTCCATCTGATCGGGGAGGATGATGGTAGTACTGCGGCTACTGATGCAAAACTCCAGCATACAAATATTGAGAAGATGGTCACGGAGAAAGACTCTGAGTCCTTAGAGAAGTTTGGAGGCGTCCAAGGAATTGCAGAGGCACTTAATAGCGATGTACAGAATGGAATCCCAGGCAATGAAGAAGATGTGAGGTCTCGCCGCCCAGTTAGTGCCCTCTTAACCACACAGGCTCCTGTTCAAGGCTTCTTCAAACTGCTCCTACAGTCCAGCAACAACTACATCATTTTCCTTCTCTTGGTGGCTGCAGTGCTGTCGATTGGCTTTGGTATGAAGGAGGAAGGCCCAAGCACCGGTTGGTATGAAGGGGCCATCATAGCGTTTGTCATCATCATACTCGTTGTTGCGCCTTCCATACGCGACTTTTGGCTTCAAAATCCACAGAGCCATGCAATGAGACAGACTGCAGGGGCCATTAAAATGGAGGTTGAGGTCATCAGAGGGGGATCCCCATGTGAAATACCCATATGTGATGTTGTTTCAGGTGACATAGTGTGCTTGAAACGGGGATCTACAGTTCCCGGTGATGGTTTGTTTGTTTCTGGTAAGTTCTTTGTATTGGATGATGGTACAGTGGCAACCATTTATGAACAGAAACCATTCTTGTTCTGTGGTTCAAAGGTGGTTGGTGGAAGTGGTCGCATGCTTGTAACGTCTGTGGGCATGAACACAGCATGGGGTGAGCTGATGAACAAAGTAGCCAATACTCCTGACCGGGCTCATTTACCAGCTCAACTTGATAAGGTCAGCACCGGCACGCAGATTATAGGGATCTCAATCTCTATTCTCATCCTGGTAGTGTTGTTCTCCCGTTTCATGGTTGAAAGGGAAGACAATCACTCTGGCCTCCCAGACCTTAGGGGGAAACCAACTGCAAGCAAGGAGATAATGAATTTAATTGAGAAAATTGTGATGAAACCAAGTGGTCGGATCAGTATCCTAACGACATCTCTGGCTATATTCCTCGTAGGAGTAGTGGAAGGAATACCTCTTTTTGTTACACTAGCCATAAGGTATTGGAATAATAAGACTTTATCTGGAAAGGCCACTGCTCAGGGGACTTTGGCGAAGTGGACAAGTGCTACATCGGGGATGAAGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

496

Amino Acids

53.5

Weight (kDa)

6.81

Isoelectric Point (pI)

37.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	270 - 362	6.2e-10	P-type ATPase actuator domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	128
Acc36I	ACCTGC	1 cut(s)	313
AccII	CGCG	1 cut(s)	747
AciI	CCGC	3 cut(s)	266, 365, 529
AclWI	GGATC	5 cut(s)	828, 841, 904, 1166, 1325
AcsI	RAATTY	1 cut(s)	1279
AcyI	GRCGYC	1 cut(s)	450
AfaI	GTAC	4 cut(s)	76, 361, 486, 958
AfiI	CCNNNNNNNGG	6 cut(s)	176, 569, 625, 680, 914, 1204
AgeI	ACCGGT	1 cut(s)	680
AgsI	TTSAA	6 cut(s)	569, 580, 761, 889, 1005, 1211
AhdI	GACNNNNNGTC	2 cut(s)	40, 427
AjnI	CCWGG	2 cut(s)	499, 1179
AloI	GAACNNNNNNTCC	2 cut(s)	888, 920
AluBI	AGCT	3 cut(s)	209, 1072, 1118
AluI	AGCT	3 cut(s)	209, 1072, 1118
Alw21I	GWGCWC	1 cut(s)	27
Alw26I	GTCTC	4 cut(s)	48, 186, 528, 778
Alw44I	GTGCAC	1 cut(s)	23
AlwI	GGATC	5 cut(s)	828, 841, 904, 1166, 1325
Ama87I	CYCGRG	1 cut(s)	38
AoxI	GGCC	5 cut(s)	670, 696, 798, 1231, 1431
ApaLI	GTGCAC	1 cut(s)	23
ApeKI	GCWGC	1 cut(s)	632
ApoI	RAATTY	1 cut(s)	1279
AsiGI	ACCGGT	1 cut(s)	680
Asp700I	GAANNNNTTC	1 cut(s)	986
AspLEI	GCGC	3 cut(s)	102, 129, 736
AspS9I	GGNCC	3 cut(s)	671, 696, 798
AsuC2I	CCSGG	2 cut(s)	909, 1103
AsuHPI	GGTGA	5 cut(s)	185, 263, 884, 923, 1079
AvaI	CYCGRG	1 cut(s)	38
AxyI	CCTNAGG	1 cut(s)	1244
BaeGI	GKGCMC	2 cut(s)	27, 544
BamHI	GGATCC	1 cut(s)	833
BanII	GRGCYC	1 cut(s)	1108
BauI	CACGAG	1 cut(s)	134
BbsI	GAAGAC	1 cut(s)	1224
Bbv12I	GWGCWC	1 cut(s)	27
BbvI	GCAGC	1 cut(s)	619
BccI	CCATC	7 cut(s)	160, 342, 347, 400, 707, 908, 947
BcgI	CGANNNNNNTGC	2 cut(s)	624, 658
BciT130I	CCWGG	2 cut(s)	501, 1181
BciVI	GTATCC	1 cut(s)	1334
BcnI	CCSGG	2 cut(s)	909, 1103
BcoDI	GTCTC	4 cut(s)	48, 186, 528, 778
BfaI	CTAG	2 cut(s)	237, 1391
BfmI	CTRYAG	5 cut(s)	291, 590, 633, 792, 900
BfoI	RGCGCY	1 cut(s)	103
BfuAI	ACCTGC	1 cut(s)	313
BfuI	GTATCC	1 cut(s)	1334
BisI	GCNGC	3 cut(s)	366, 529, 633
BlsI	GCNGC	3 cut(s)	367, 530, 634
BmcAI	AGTACT	2 cut(s)	76, 361
Bme1390I	CCNGG	4 cut(s)	501, 909, 1103, 1181
BmeRI	GACNNNNNGTC	2 cut(s)	40, 427
BmeT110I	CYCGRG	1 cut(s)	38
BmgT120I	GGNCC	3 cut(s)	671, 696, 798
BmiI	GGNNCC	4 cut(s)	561, 697, 799, 835
BmrFI	CCNGG	4 cut(s)	501, 909, 1103, 1181
BmrI	ACTGGG	1 cut(s)	527
BmsI	GCATC	3 cut(s)	244, 253, 364
BmuI	ACTGGG	1 cut(s)	527
BpiI	GAAGAC	1 cut(s)	1224
BplI	GAGNNNNNCTC	2 cut(s)	407, 439
BpmI	CTGGAG	1 cut(s)	368
Bpu10I	CCTNAGC	1 cut(s)	1440
BpuMI	CCSGG	2 cut(s)	909, 1103
BsaBI	GATNNNNATC	2 cut(s)	1163, 1322
BsaHI	GRCGYC	1 cut(s)	450
BsaI	GGTCTC	2 cut(s)	186, 528
BsaJI	CCNNGG	2 cut(s)	454, 499
BsaWI	WCCGGW	1 cut(s)	680
BsaXI	ACNNNNNCTCC	2 cut(s)	544, 574
Bsc4I	CCNNNNNNNGG	6 cut(s)	176, 569, 625, 680, 914, 1204
Bse118I	RCCGGY	2 cut(s)	680, 1139
Bse1I	ACTGG	5 cut(s)	28, 69, 101, 253, 533
Bse21I	CCTNAGG	1 cut(s)	1244
Bse3DI	GCAATG	2 cut(s)	511, 786
Bse8I	GATNNNNATC	2 cut(s)	1163, 1322
BseBI	CCWGG	2 cut(s)	501, 1181
BseDI	CCNNGG	2 cut(s)	454, 499
BseGI	GGATG	6 cut(s)	147, 152, 355, 955, 1176, 1485
BseJI	GATNNNNATC	2 cut(s)	1163, 1322
BseLI	CCNNNNNNNGG	6 cut(s)	176, 569, 625, 680, 914, 1204
BseMI	GCAATG	2 cut(s)	511, 786
BseMII	CTCAG	3 cut(s)	59, 417, 1454
BseNI	ACTGG	5 cut(s)	28, 69, 101, 253, 533
BseSI	GKGCMC	2 cut(s)	27, 544
BseXI	GCAGC	1 cut(s)	619
Bsh1236I	CGCG	1 cut(s)	747
BshFI	GGCC	5 cut(s)	672, 698, 800, 1233, 1433
BshTI	ACCGGT	1 cut(s)	680
BsiHKAI	GWGCWC	1 cut(s)	27
BsiHKCI	CYCGRG	1 cut(s)	38
BsiSI	CCGG	4 cut(s)	681, 909, 1102, 1140
BslFI	GGGAC	2 cut(s)	301, 1459
BslI	CCNNNNNNNGG	6 cut(s)	176, 569, 625, 680, 914, 1204
BsmAI	GTCTC	4 cut(s)	48, 186, 528, 778
BsmFI	GGGAC	2 cut(s)	301, 1459
BsnI	GGCC	5 cut(s)	672, 698, 800, 1233, 1433
Bso31I	GGTCTC	2 cut(s)	186, 528
BsoBI	CYCGRG	1 cut(s)	38
Bsp1286I	GDGCHC	3 cut(s)	27, 544, 1108
Bsp1407I	TGTACA	1 cut(s)	484
Bsp143I	GATC	5 cut(s)	339, 833, 896, 1158, 1317
BspACI	CCGC	3 cut(s)	266, 365, 529
BspANI	GGCC	5 cut(s)	672, 698, 800, 1233, 1433
BspCNI	CTCAG	3 cut(s)	58, 418, 1453
BspFNI	CGCG	1 cut(s)	747
BspLI	GGNNCC	4 cut(s)	561, 697, 799, 835
BspMAI	CTGCAG	2 cut(s)	637, 796
BspMI	ACCTGC	1 cut(s)	313
BspPI	GGATC	5 cut(s)	828, 841, 904, 1166, 1325
BspTNI	GGTCTC	2 cut(s)	186, 528
BsrDI	GCAATG	2 cut(s)	511, 786
BsrFI	RCCGGY	2 cut(s)	680, 1139
BsrGI	TGTACA	1 cut(s)	484
BsrI	ACTGG	5 cut(s)	28, 69, 101, 253, 533
BssAI	RCCGGY	2 cut(s)	680, 1139
BssECI	CCNNGG	2 cut(s)	454, 499
BssMI	GATC	5 cut(s)	339, 833, 896, 1158, 1317
BssNI	GRCGYC	1 cut(s)	450
BssSI	CACGAG	1 cut(s)	134
BssT1I	CCWWGG	1 cut(s)	454
Bst2BI	CACGAG	1 cut(s)	134
Bst2UI	CCWGG	2 cut(s)	501, 1181
Bst4CI	ACNGT	4 cut(s)	55, 594, 904, 961
BstACI	GRCGYC	1 cut(s)	450
BstAPI	GCANNNNNTGC	1 cut(s)	263
BstAUI	TGTACA	1 cut(s)	484
BstC8I	GCNNGC	4 cut(s)	16, 1031, 1145, 1264
BstDEI	CTNAG	5 cut(s)	45, 426, 433, 1244, 1440
BstENI	CCTNNNNNAGG	1 cut(s)	567
BstF5I	GGATG	6 cut(s)	147, 152, 355, 955, 1176, 1485
BstFNI	CGCG	1 cut(s)	747
BstH2I	RGCGCY	1 cut(s)	103
BstHHI	GCGC	3 cut(s)	102, 129, 736
BstKTI	GATC	5 cut(s)	342, 836, 899, 1161, 1320
BstMAI	GTCTC	4 cut(s)	48, 186, 528, 778
BstMBI	GATC	5 cut(s)	339, 833, 896, 1158, 1317
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 374, 704
BstNI	CCWGG	2 cut(s)	501, 1181
BstNSI	RCATGY	1 cut(s)	1033
BstSCI	CCNGG	4 cut(s)	499, 907, 1101, 1179
BstSFI	CTRYAG	5 cut(s)	291, 590, 633, 792, 900
BstSLI	GKGCMC	2 cut(s)	27, 544
BstUI	CGCG	1 cut(s)	747
BstV1I	GCAGC	1 cut(s)	619
BstV2I	GAAGAC	1 cut(s)	1224
BstX2I	RGATCY	3 cut(s)	833, 896, 1158
BstXI	CCANNNNNNTGG	1 cut(s)	808
BstYI	RGATCY	3 cut(s)	833, 896, 1158
Bsu36I	CCTNAGG	1 cut(s)	1244
BsuI	GTATCC	1 cut(s)	1334
BsuRI	GGCC	5 cut(s)	672, 698, 800, 1233, 1433
BtgZI	GCGATG	1 cut(s)	495
BtsCI	GGATG	6 cut(s)	147, 152, 355, 955, 1176, 1485
BtsI	GCAGTG	2 cut(s)	642, 1434
BtsIMutI	CAGTG	5 cut(s)	60, 94, 642, 966, 1434
BveI	ACCTGC	1 cut(s)	313
Cac8I	GCNNGC	4 cut(s)	16, 1031, 1145, 1264
CfoI	GCGC	3 cut(s)	102, 129, 736
Cfr10I	RCCGGY	2 cut(s)	680, 1139
Cfr13I	GGNCC	3 cut(s)	671, 696, 798
CseI	GACGC	1 cut(s)	439
Csp6I	GTAC	4 cut(s)	75, 360, 485, 957
CspAI	ACCGGT	1 cut(s)	680
CviAII	CATG	6 cut(s)	776, 840, 1030, 1051, 1062, 1204
CviQI	GTAC	4 cut(s)	75, 360, 485, 957
DdeI	CTNAG	5 cut(s)	45, 426, 433, 1244, 1440
DpnI	GATC	5 cut(s)	341, 835, 898, 1160, 1319
DpnII	GATC	5 cut(s)	339, 833, 896, 1158, 1317
DriI	GACNNNNNGTC	2 cut(s)	40, 427
Eam1105I	GACNNNNNGTC	2 cut(s)	40, 427
Eco130I	CCWWGG	1 cut(s)	454
Eco24I	GRGCYC	1 cut(s)	1108
Eco31I	GGTCTC	2 cut(s)	186, 528
Eco81I	CCTNAGG	1 cut(s)	1244
Eco88I	CYCGRG	1 cut(s)	38
EcoNI	CCTNNNNNAGG	1 cut(s)	567
EcoRII	CCWGG	2 cut(s)	499, 1179
EcoT14I	CCWWGG	1 cut(s)	454
EcoT38I	GRGCYC	1 cut(s)	1108
ErhI	CCWWGG	1 cut(s)	454
FaeI	CATG	6 cut(s)	779, 843, 1033, 1054, 1065, 1207
FaqI	GGGAC	2 cut(s)	301, 1459
FatI	CATG	6 cut(s)	775, 839, 1029, 1050, 1061, 1203
FauNDI	CATATG	1 cut(s)	854
Fnu4HI	GCNGC	3 cut(s)	366, 529, 633
FokI	GGATG	5 cut(s)	134, 139, 362, 962, 1163
FriOI	GRGCYC	1 cut(s)	1108
Fsp4HI	GCNGC	3 cut(s)	366, 529, 633
FspBI	CTAG	2 cut(s)	237, 1391
FspI	TGCGCA	1 cut(s)	128
GlaI	GCGC	3 cut(s)	101, 128, 735
GluI	GCNGC	3 cut(s)	366, 529, 633
GsuI	CTGGAG	1 cut(s)	368
HaeII	RGCGCY	1 cut(s)	103
HaeIII	GGCC	5 cut(s)	672, 698, 800, 1233, 1433
HapII	CCGG	4 cut(s)	681, 909, 1102, 1140
HgaI	GACGC	1 cut(s)	439
HhaI	GCGC	3 cut(s)	102, 129, 736
Hin1I	GRCGYC	1 cut(s)	450
Hin1II	CATG	6 cut(s)	779, 843, 1033, 1054, 1065, 1207
Hin6I	GCGC	3 cut(s)	100, 127, 734
HinP1I	GCGC	3 cut(s)	100, 127, 734
HinfI	GANTC	5 cut(s)	41, 115, 422, 428, 495
HpaII	CCGG	4 cut(s)	681, 909, 1102, 1140
HphI	GGTGA	5 cut(s)	185, 263, 884, 923, 1079
Hpy166II	GTNNAC	2 cut(s)	25, 1461
Hpy188I	TCNGA	4 cut(s)	339, 427, 827, 1317
Hpy188III	TCNNGA	5 cut(s)	136, 156, 324, 1097, 1425
Hpy8I	GTNNAC	2 cut(s)	25, 1461
HpyAV	CCTTC	6 cut(s)	629, 655, 662, 686, 747, 1361
HpyCH4III	ACNGT	4 cut(s)	55, 594, 904, 961
HpyCH4IV	ACGT	1 cut(s)	1040
HpyCH4V	TGCA	9 cut(s)	25, 257, 274, 377, 464, 635, 779, 794, 1262
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 374, 704
HpyF3I	CTNAG	5 cut(s)	45, 426, 433, 1244, 1440
HpySE526I	ACGT	1 cut(s)	1040
Hsp92I	GRCGYC	1 cut(s)	450
Hsp92II	CATG	6 cut(s)	779, 843, 1033, 1054, 1065, 1207
HspAI	GCGC	3 cut(s)	100, 127, 734
Kzo9I	GATC	5 cut(s)	339, 833, 896, 1158, 1317
LmnI	GCTCC	2 cut(s)	565, 591
Lsp1109I	GCAGC	1 cut(s)	619
LweI	GCATC	3 cut(s)	244, 253, 364
MaeI	CTAG	2 cut(s)	237, 1391
MaeII	ACGT	1 cut(s)	1040
MaeIII	GTNAC	4 cut(s)	409, 872, 1036, 1384
MalI	GATC	5 cut(s)	341, 835, 898, 1160, 1319
MboI	GATC	5 cut(s)	339, 833, 896, 1158, 1317
MboII	GAAGA	5 cut(s)	415, 521, 524, 568, 1229
MflI	RGATCY	3 cut(s)	833, 896, 1158
MhlI	GDGCHC	3 cut(s)	27, 544, 1108
MluCI	AATT	5 cut(s)	317, 459, 1279, 1284, 1293
MlyI	GAGTC	3 cut(s)	50, 416, 437
MmeI	TCCRAC	1 cut(s)	1295
MroXI	GAANNNNTTC	1 cut(s)	986
MseI	TTAA	4 cut(s)	474, 548, 804, 1283
MslI	CAYNNNNRTG	1 cut(s)	806
MspI	CCGG	4 cut(s)	681, 909, 1102, 1140
MspR9I	CCNGG	4 cut(s)	501, 909, 1103, 1181
MvaI	CCWGG	2 cut(s)	501, 1181
MvnI	CGCG	1 cut(s)	747
MwoI	GCNNNNNNNGC	3 cut(s)	263, 374, 704
NciI	CCSGG	2 cut(s)	909, 1103
NdeI	CATATG	1 cut(s)	854
NdeII	GATC	5 cut(s)	339, 833, 896, 1158, 1317
NlaIII	CATG	6 cut(s)	779, 843, 1033, 1054, 1065, 1207
NlaIV	GGNNCC	4 cut(s)	561, 697, 799, 835
NmuCI	GTSAC	2 cut(s)	409, 872
NsbI	TGCGCA	1 cut(s)	128
NspI	RCATGY	1 cut(s)	1033
PaeI	GCATGC	1 cut(s)	1033
PaeR7I	CTCGAG	1 cut(s)	38
PdmI	GAANNNNTTC	1 cut(s)	986
PfeI	GAWTC	2 cut(s)	115, 495
PinAI	ACCGGT	1 cut(s)	680
PkrI	GCNGC	3 cut(s)	367, 530, 634
PleI	GAGTC	3 cut(s)	49, 416, 436
PpsI	GAGTC	3 cut(s)	49, 416, 436
Psp6I	CCWGG	2 cut(s)	499, 1179
PspGI	CCWGG	2 cut(s)	499, 1179
PspN4I	GGNNCC	4 cut(s)	561, 697, 799, 835
PspPI	GGNCC	3 cut(s)	671, 696, 798
PspXI	VCTCGAGB	1 cut(s)	38
PstI	CTGCAG	2 cut(s)	637, 796
PsuI	RGATCY	3 cut(s)	833, 896, 1158
RsaI	GTAC	4 cut(s)	76, 361, 486, 958
RsaNI	GTAC	4 cut(s)	75, 360, 485, 957
RseI	CAYNNNNRTG	1 cut(s)	806
SaqAI	TTAA	4 cut(s)	474, 548, 804, 1283
SatI	GCNGC	3 cut(s)	366, 529, 633
Sau3AI	GATC	5 cut(s)	339, 833, 896, 1158, 1317
Sau96I	GGNCC	3 cut(s)	671, 696, 798
ScaI	AGTACT	2 cut(s)	76, 361
SchI	GAGTC	3 cut(s)	50, 416, 437
ScrFI	CCNGG	4 cut(s)	501, 909, 1103, 1181
SduI	GDGCHC	3 cut(s)	27, 544, 1108
SfaNI	GCATC	3 cut(s)	244, 253, 364
SfcI	CTRYAG	5 cut(s)	291, 590, 633, 792, 900
Sfr274I	CTCGAG	1 cut(s)	38
SlaI	CTCGAG	1 cut(s)	38
SmiMI	CAYNNNNRTG	1 cut(s)	806
SmlI	CTYRAG	1 cut(s)	38
SmoI	CTYRAG	1 cut(s)	38
SphI	GCATGC	1 cut(s)	1033
Sse9I	AATT	5 cut(s)	317, 459, 1279, 1284, 1293
SsiI	CCGC	3 cut(s)	266, 365, 529
SspI	AATATT	1 cut(s)	397
SspMI	CTAG	2 cut(s)	237, 1391
StyD4I	CCNGG	4 cut(s)	499, 907, 1101, 1179
StyI	CCWWGG	1 cut(s)	454
TaaI	ACNGT	4 cut(s)	55, 594, 904, 961
TaiI	ACGT	1 cut(s)	1043
TaqI	TCGA	3 cut(s)	33, 39, 644
TasI	AATT	5 cut(s)	317, 459, 1279, 1284, 1293
TatI	WGTACW	3 cut(s)	74, 359, 484
TauI	GCSGC	2 cut(s)	368, 531
TfiI	GAWTC	2 cut(s)	115, 495
Tru1I	TTAA	4 cut(s)	474, 548, 804, 1283
Tru9I	TTAA	4 cut(s)	474, 548, 804, 1283
TscAI	CASTG	5 cut(s)	60, 101, 642, 966, 1441
TseFI	GTSAC	2 cut(s)	409, 872
TseI	GCWGC	1 cut(s)	632
Tsp45I	GTSAC	2 cut(s)	409, 872
TspDTI	ATGAA	9 cut(s)	522, 674, 705, 990, 1067, 1091, 1192, 1292, 1316
TspGWI	ACGGA	1 cut(s)	428
TspRI	CASTG	5 cut(s)	60, 101, 642, 966, 1441
VneI	GTGCAC	1 cut(s)	23
XagI	CCTNNNNNAGG	1 cut(s)	567
XapI	RAATTY	1 cut(s)	1279
XceI	RCATGY	1 cut(s)	1033
XcmI	CCANNNNNNNNNTGG	2 cut(s)	93, 681
XhoI	CTCGAG	1 cut(s)	38
XmnI	GAANNNNTTC	1 cut(s)	986
XspI	CTAG	2 cut(s)	237, 1391
ZrmI	AGTACT	2 cut(s)	76, 361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.