Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001979.1

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Forward (+)

23723 .. 26581

Gene Structure 2859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001979.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ctggaacttgcaagaactacacaccttgcacctgcatcacctcacgtttctgaagcagtatcaagtttgagcgtggaggatgatagtaccatcactagtactgctacaatttctgaccaagtgaatctgaacattgaggatggtgttactaccaggattgctaatgaggccaagatccagcatgcagatattcccaagatagtaaaggagaaggacttcgctaccttacagaagtctggaggcatcaaaggaattgcagaggcactcagaacagatttacactgcggaatcccaggtgatgaacaagatcttcatgatcgacgcagtgcagtagtcctaacaacacaagctccaactccaagcttctttaaacttctccgacaatcttgtttcgattggaccgttttccttctcttcgtgtgtgtcattctgtcaactgtatttggtatccagcaggaaggcccaagtaatggttggcttgaaggagctgtcggaatgtttgcgatcatcatacttgtggttgtacctacaatgctcaagtatttctccgtgccgcatcccaggaatactagtcaaatgaaagctaaggtccgcagaggaggaaacctgcttcatatctccccatcggatattgtgccaggtgacatagtacacttggaattgggatctctagttcctgctgatggtttgttcgtttcgactggtgaatccttagtgttggaagatggtatggaatttccaaccgtcgatgacagcaatccttttctggtttatggtgcaagggtggtaaatggtaatggtcgcatgttggtcacttgtgtggggatgaagacaacattaggtgagctgatgggccaagttagatgtacacctaaccaggaccaattaccagctcaacttgataacttgagcacaaggttgcagaatgttgggctcttgatcacaattttcatgactatagtgcttatcattcgttccgtggttctaaaggttaatgagtaccctggcctccaagctgatcagttcaaggctaaaccaaatgcaattgagcttatcaatgtcattgacagatttttcatgaaatcaagtgggcagattagtgtgttggcgacgtatctgcctttattgattgtaggcttagcggaaggagtacctttttcagttgcacttgccatcaattattggactaagaccacgctgtctgggaaagctagtgctcaaagaatcttagcttgtttcaccatgggctctgtgtcaaatatttgcattggtaatgggctaactttgaaccctgcacttgaagttgacgtgagctgtgatggggatcaaataatcgatacagagtgtgttactagtattgacagacacgttcgtgaagctttatacaaaggaattagcataccacttttgatgccgtcaagtccttgtagctcaacagaacaccggctcctgctaccgtgggccaaatctaatttgggtatggacaatgagaatttattgcaaaattgcaccatcgtggggagcggaaagttgggcaccgatgaggaggctagaggagttcagatgaaggacagtgaaactggagatatgtgcttttattggaatggacctgcaacaacaatattgcccatgtgttctgaatactatgatagcaaggggacaacaaagctcatggatgaacagaagaaacgtgattttaaagaaattatggggaacatgcagtccaaacatctcaagaccattgcatttgcgtacaagaagattgatgctctaatgcctgaagaaggcaacaacttaatattgataggactgctaggtgtgaagtgttgcactgagacaatggaagcaccggaagttctacaaaaagcgggagtggacattatccggttcgcaaaagataatgagtcagtactgtcggaaggtgatagtcctgtctatggaatgggaagacctggtgacatgctccacacactgcaacgtctgaaggaagagggccatgttgtagcaatggttggggctagaacaaatgagactccagctctaaaagaagccgatgtggggattgcaatagggacttgcattagtgaaatggcaagagagggttctgatctcatcatccccgattgcagtctcagtttcttggtcaacattattcggatcggaagatgcattcactacaacattcagaagtacatccaagttgagctcaccatgaatatatcattgcttgtgataatctcgatcactacaatgtccttgggacactgcacagttggggcaatcgaagtagtatgggcaattatggttgtgacactatgtgggcttgcgctactggttgagccgccaaccgaggagcagatggaaaagccgccggtaaaacaaactgaatctctcattaccaaggcaatgtggagaaacatattacttcaagctttatatcaggctgccatcttggtcacctttcagttcaaatataaagctctcccaggcatcaacgagaagataatggagtccatagttttcagcagttatgttctttgtcaggtatttaatcaagtcagctcaagggagctagagaagaaaaatgtgtttagagatatacttcgaactcgatggttatgggtggctgtgggagttagtatcatgatgcaggtggcttttgttgagattgcacacaaggttgctggcaatgcaaggttgaattgggcacaatggggtgtctgtcttttaatagcgatggtttcctggccaatggatttggctgggaaatgtgtatggggtgtcatcatgaagtgggcacaatggggtgtctgtcttttattagagtacttggatctgatattgaatccaccagtatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

952

Amino Acids

104.5

Weight (kDa)

5.5

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	40, 2641
AasI	GACNNNNNNGTC	1 cut(s)	1198
Acc36I	ACCTGC	4 cut(s)	40, 615, 1618, 2641
AccB1I	GGYRCC	1 cut(s)	1535
AccB7I	CCANNNNNTGG	1 cut(s)	470
AccBSI	CCGCTC	1 cut(s)	1524
AciI	CCGC	8 cut(s)	285, 554, 592, 1142, 1524, 1868, 2342, 2369
AclWI	GGATC	5 cut(s)	169, 673, 1332, 2165, 2841
AcoI	YGGCCR	1 cut(s)	2747
AcsI	RAATTY	2 cut(s)	734, 1492
AcuI	CTGAAG	3 cut(s)	72, 1800, 2003
AdeI	CACNNNGTG	1 cut(s)	2318
AfiI	CCNNNNNNNGG	6 cut(s)	470, 683, 1518, 1784, 1937, 2058
AflIII	ACRYGT	1 cut(s)	1366
AgsI	TTSAA	8 cut(s)	482, 1027, 1288, 1301, 2429, 2470, 2701, 2845
AhlI	ACTAGT	3 cut(s)	95, 569, 1352
AjiI	CACGTC	1 cut(s)	1309
AjnI	CCWGG	9 cut(s)	152, 292, 560, 637, 876, 1003, 1951, 2485, 2744
AleI	CACNNNNGTG	3 cut(s)	818, 1371, 1514
AloI	GAACNNNNNNTCC	6 cut(s)	657, 689, 1431, 1463, 1706, 1738
Alw21I	GWGCWC	3 cut(s)	914, 1219, 2208
Alw26I	GTCTC	3 cut(s)	1829, 2024, 2135
AlwI	GGATC	5 cut(s)	169, 673, 1332, 2165, 2841
AoxI	GGCC	7 cut(s)	168, 460, 853, 1006, 1461, 1993, 2747
ApeKI	GCWGC	1 cut(s)	2444
ApoI	RAATTY	2 cut(s)	734, 1492
Asp700I	GAANNNNTTC	1 cut(s)	215
AspLEI	GCGC	1 cut(s)	2329
AspS9I	GGNCC	8 cut(s)	399, 461, 589, 853, 880, 1461, 1607, 1993
AsuII	TTCGAA	1 cut(s)	2605
AvaII	GGWCC	4 cut(s)	399, 589, 880, 1607
BaeGI	GKGCMC	3 cut(s)	1538, 2710, 2800
BalI	TGGCCA	1 cut(s)	2749
BanI	GGYRCC	1 cut(s)	1535
BanII	GRGCYC	3 cut(s)	936, 1250, 2208
BbsI	GAAGAC	2 cut(s)	836, 1954
Bbv12I	GWGCWC	3 cut(s)	914, 1219, 2208
BbvI	GCAGC	1 cut(s)	2431
BceAI	ACGGC	1 cut(s)	1399
BcgI	CGANNNNNNTGC	2 cut(s)	1099, 1133
BciT130I	CCWGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
BciVI	GTATCC	1 cut(s)	458
BclI	TGATCA	2 cut(s)	939, 1018
BcoDI	GTCTC	3 cut(s)	1829, 2024, 2135
BcuI	ACTAGT	3 cut(s)	95, 569, 1352
BfaI	CTAG	9 cut(s)	96, 570, 671, 1212, 1353, 1551, 1814, 2019, 2573
BfmI	CTRYAG	1 cut(s)	957
BfuAI	ACCTGC	4 cut(s)	40, 615, 1618, 2641
BfuI	GTATCC	1 cut(s)	458
BglII	AGATCT	1 cut(s)	307
BisI	GCNGC	4 cut(s)	554, 2342, 2369, 2445
BlpI	GCTNAGC	1 cut(s)	1138
BlsI	GCNGC	4 cut(s)	555, 2343, 2370, 2446
BmcAI	AGTACT	3 cut(s)	100, 1911, 2828
Bme1390I	CCNGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
Bme18I	GGWCC	4 cut(s)	399, 589, 880, 1607
BmgBI	CACGTC	1 cut(s)	1309
BmgT120I	GGNCC	8 cut(s)	399, 461, 589, 853, 880, 1461, 1607, 1993
BmiI	GGNNCC	2 cut(s)	1448, 1537
BmrFI	CCNGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
BmsI	GCATC	8 cut(s)	44, 252, 565, 1401, 1756, 2156, 2499, 2637
BpiI	GAAGAC	2 cut(s)	836, 1954
BpmI	CTGGAG	3 cut(s)	258, 1602, 2019
Bpu10I	CCTNAGC	1 cut(s)	585
Bpu1102I	GCTNAGC	1 cut(s)	1138
Bpu14I	TTCGAA	1 cut(s)	2605
BpuEI	CTTGAG	4 cut(s)	521, 928, 1718, 2548
Bsa29I	ATCGAT	1 cut(s)	1335
BsaBI	GATNNNNATC	1 cut(s)	1323
BsaWI	WCCGGW	2 cut(s)	1849, 1884
BsaXI	ACNNNNNCTCC	4 cut(s)	334, 364, 1431, 1461
Bsc4I	CCNNNNNNNGG	6 cut(s)	470, 683, 1518, 1784, 1937, 2058
Bse118I	RCCGGY	2 cut(s)	1443, 2371
Bse1I	ACTGG	4 cut(s)	706, 1585, 2337, 2852
Bse3DI	GCAATG	5 cut(s)	1740, 2013, 2222, 2412, 2695
Bse8I	GATNNNNATC	1 cut(s)	1323
BseBI	CCWGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
BseCI	ATCGAT	1 cut(s)	1335
BseGI	GGATG	7 cut(s)	85, 145, 556, 831, 1681, 2115, 2193
BseJI	GATNNNNATC	1 cut(s)	1323
BseLI	CCNNNNNNNGG	6 cut(s)	470, 683, 1518, 1784, 1937, 2058
BseMI	GCAATG	5 cut(s)	1740, 2013, 2222, 2412, 2695
BseMII	CTCAG	3 cut(s)	280, 1824, 2146
BseNI	ACTGG	4 cut(s)	706, 1585, 2337, 2852
BseRI	GAGGAG	4 cut(s)	612, 1559, 1569, 2366
BseSI	GKGCMC	3 cut(s)	1538, 2710, 2800
BseXI	GCAGC	1 cut(s)	2431
BseYI	CCCAGC	1 cut(s)	2762
BsgI	GTGCAG	3 cut(s)	348, 1278, 2251
BshFI	GGCC	7 cut(s)	170, 462, 855, 1008, 1463, 1995, 2749
BshNI	GGYRCC	1 cut(s)	1535
BshVI	ATCGAT	1 cut(s)	1335
BsiHKAI	GWGCWC	3 cut(s)	914, 1219, 2208
BsiSI	CCGG	4 cut(s)	1444, 1850, 1885, 2372
BslFI	GGGAC	3 cut(s)	1672, 2086, 2274
BslI	CCNNNNNNNGG	6 cut(s)	470, 683, 1518, 1784, 1937, 2058
BsmAI	GTCTC	3 cut(s)	1829, 2024, 2135
BsmFI	GGGAC	3 cut(s)	1672, 2086, 2274
BsmI	GAATGC	1 cut(s)	2169
BsnI	GGCC	7 cut(s)	170, 462, 855, 1008, 1463, 1995, 2749
Bsp119I	TTCGAA	1 cut(s)	2605
Bsp1286I	GDGCHC	8 cut(s)	914, 936, 1219, 1250, 1538, 2208, 2710, 2800
Bsp1407I	TGTACA	1 cut(s)	866
Bsp1720I	GCTNAGC	1 cut(s)	1138
Bsp19I	CCATGG	1 cut(s)	1242
BspACI	CCGC	8 cut(s)	285, 554, 592, 1142, 1524, 1868, 2342, 2369
BspANI	GGCC	7 cut(s)	170, 462, 855, 1008, 1463, 1995, 2749
BspCNI	CTCAG	3 cut(s)	279, 1825, 2145
BspDI	ATCGAT	1 cut(s)	1335
BspHI	TCATGA	5 cut(s)	313, 951, 1077, 2643, 2787
BspLI	GGNNCC	2 cut(s)	1448, 1537
BspMI	ACCTGC	4 cut(s)	40, 615, 1618, 2641
BspPI	GGATC	5 cut(s)	169, 673, 1332, 2165, 2841
BspT104I	TTCGAA	1 cut(s)	2605
BspT107I	GGYRCC	1 cut(s)	1535
BsrBI	CCGCTC	1 cut(s)	1524
BsrDI	GCAATG	5 cut(s)	1740, 2013, 2222, 2412, 2695
BsrFI	RCCGGY	2 cut(s)	1443, 2371
BsrGI	TGTACA	1 cut(s)	866
BsrI	ACTGG	4 cut(s)	706, 1585, 2337, 2852
BssAI	RCCGGY	2 cut(s)	1443, 2371
BssT1I	CCWWGG	3 cut(s)	1242, 2256, 2400
Bst2UI	CCWGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
Bst4CI	ACNGT	7 cut(s)	403, 439, 745, 1458, 1574, 1914, 2272
Bst6I	CTCTTC	2 cut(s)	419, 1983
BstAUI	TGTACA	1 cut(s)	866
BstBI	TTCGAA	1 cut(s)	2605
BstC8I	GCNNGC	3 cut(s)	183, 2325, 2686
BstDEI	CTNAG	8 cut(s)	266, 585, 712, 1138, 1188, 1228, 1833, 2132
BstDSI	CCRYGG	3 cut(s)	978, 1242, 1457
BstEII	GGTNACC	1 cut(s)	2455
BstENI	CCTNNNNNAGG	1 cut(s)	1782
BstF5I	GGATG	7 cut(s)	85, 145, 556, 831, 1681, 2115, 2193
BstHHI	GCGC	1 cut(s)	2329
BstMAI	GTCTC	3 cut(s)	1829, 2024, 2135
BstMWI	GCNNNNNNNGC	2 cut(s)	167, 2690
BstNI	CCWGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
BstNSI	RCATGY	4 cut(s)	185, 808, 1720, 1963
BstPI	GGTNACC	1 cut(s)	2455
BstSCI	CCNGG	9 cut(s)	152, 292, 560, 637, 876, 1003, 1951, 2485, 2744
BstSFI	CTRYAG	1 cut(s)	957
BstSLI	GKGCMC	3 cut(s)	1538, 2710, 2800
BstV1I	GCAGC	1 cut(s)	2431
BstV2I	GAAGAC	2 cut(s)	836, 1954
BstX2I	RGATCY	4 cut(s)	174, 307, 665, 2833
BstYI	RGATCY	4 cut(s)	174, 307, 665, 2833
Bsu15I	ATCGAT	1 cut(s)	1335
BsuI	GTATCC	1 cut(s)	458
BsuRI	GGCC	7 cut(s)	170, 462, 855, 1008, 1463, 1995, 2749
BsuTUI	ATCGAT	1 cut(s)	1335
BtgI	CCRYGG	3 cut(s)	978, 1242, 1457
BtgZI	GCGATG	1 cut(s)	2750
BtrI	CACGTC	1 cut(s)	1309
BtsCI	GGATG	7 cut(s)	85, 145, 556, 831, 1681, 2115, 2193
BtsI	GCAGTG	4 cut(s)	280, 331, 1970, 2263
BtsIMutI	CAGTG	6 cut(s)	280, 331, 1579, 1830, 1970, 2263
BveI	ACCTGC	4 cut(s)	40, 615, 1618, 2641
Cac8I	GCNNGC	3 cut(s)	183, 2325, 2686
CciI	TCATGA	5 cut(s)	313, 951, 1077, 2643, 2787
CfoI	GCGC	1 cut(s)	2329
Cfr10I	RCCGGY	2 cut(s)	1443, 2371
Cfr13I	GGNCC	8 cut(s)	399, 461, 589, 853, 880, 1461, 1607, 1993
ClaI	ATCGAT	1 cut(s)	1335
CseI	GACGC	1 cut(s)	330
CsiI	ACCWGGT	1 cut(s)	1951
DdeI	CTNAG	8 cut(s)	266, 585, 712, 1138, 1188, 1228, 1833, 2132
DraI	TTTAAA	2 cut(s)	370, 1699
DraIII	CACNNNGTG	1 cut(s)	2318
DrdI	GACNNNNNNGTC	1 cut(s)	1198
DseDI	GACNNNNNNGTC	1 cut(s)	1198
EaeI	YGGCCR	1 cut(s)	2747
Eam1104I	CTCTTC	2 cut(s)	419, 1983
EarI	CTCTTC	2 cut(s)	419, 1983
Ecl136II	GAGCTC	1 cut(s)	2206
Eco130I	CCWWGG	3 cut(s)	1242, 2256, 2400
Eco24I	GRGCYC	3 cut(s)	936, 1250, 2208
Eco47I	GGWCC	4 cut(s)	399, 589, 880, 1607
Eco53kI	GAGCTC	1 cut(s)	2206
Eco57I	CTGAAG	3 cut(s)	72, 1800, 2003
Eco91I	GGTNACC	1 cut(s)	2455
EcoICRI	GAGCTC	1 cut(s)	2206
EcoNI	CCTNNNNNAGG	1 cut(s)	1782
EcoO65I	GGTNACC	1 cut(s)	2455
EcoRII	CCWGG	9 cut(s)	152, 292, 560, 637, 876, 1003, 1951, 2485, 2744
EcoT14I	CCWWGG	3 cut(s)	1242, 2256, 2400
EcoT22I	ATGCAT	1 cut(s)	2171
EcoT38I	GRGCYC	3 cut(s)	936, 1250, 2208
ErhI	CCWWGG	3 cut(s)	1242, 2256, 2400
FaqI	GGGAC	3 cut(s)	1672, 2086, 2274
FauI	CCCGC	1 cut(s)	1861
FbaI	TGATCA	2 cut(s)	939, 1018
Fnu4HI	GCNGC	4 cut(s)	554, 2342, 2369, 2445
FokI	GGATG	7 cut(s)	92, 152, 543, 838, 1688, 2102, 2180
FriOI	GRGCYC	3 cut(s)	936, 1250, 2208
Fsp4HI	GCNGC	4 cut(s)	554, 2342, 2369, 2445
FspBI	CTAG	9 cut(s)	96, 570, 671, 1212, 1353, 1551, 1814, 2019, 2573
GlaI	GCGC	1 cut(s)	2328
GluI	GCNGC	4 cut(s)	554, 2342, 2369, 2445
GsaI	CCCAGC	1 cut(s)	2766
GsuI	CTGGAG	3 cut(s)	258, 1602, 2019
HaeIII	GGCC	7 cut(s)	170, 462, 855, 1008, 1463, 1995, 2749
HapII	CCGG	4 cut(s)	1444, 1850, 1885, 2372
HgaI	GACGC	1 cut(s)	330
HhaI	GCGC	1 cut(s)	2329
Hin6I	GCGC	1 cut(s)	2327
HinP1I	GCGC	1 cut(s)	2327
HincII	GTYRAC	3 cut(s)	435, 1306, 2146
HindII	GTYRAC	3 cut(s)	435, 1306, 2146
HindIII	AAGCTT	3 cut(s)	361, 1377, 2430
HinfI	GANTC	9 cut(s)	124, 288, 707, 1224, 1904, 2032, 2387, 2510, 2845
HpaII	CCGG	4 cut(s)	1444, 1850, 1885, 2372
Hpy166II	GTNNAC	6 cut(s)	435, 652, 869, 1306, 1876, 2146
Hpy8I	GTNNAC	6 cut(s)	435, 652, 869, 1306, 1876, 2146
Hpy99I	CGWCG	3 cut(s)	324, 749, 1114
HpyAV	CCTTC	9 cut(s)	205, 419, 452, 476, 1139, 1561, 1778, 1913, 1978
HpyCH4III	ACNGT	7 cut(s)	403, 439, 745, 1458, 1574, 1914, 2272
HpyCH4IV	ACGT	6 cut(s)	45, 1112, 1308, 1368, 1690, 1978
HpyF10VI	GCNNNNNNNGC	2 cut(s)	167, 2690
HpyF3I	CTNAG	8 cut(s)	266, 585, 712, 1138, 1188, 1228, 1833, 2132
HpySE526I	ACGT	6 cut(s)	45, 1112, 1308, 1368, 1690, 1978
HspAI	GCGC	1 cut(s)	2327
Ksp22I	TGATCA	2 cut(s)	939, 1018
LmnI	GCTCC	7 cut(s)	355, 485, 1452, 1521, 1968, 2353, 2569
Lsp1109I	GCAGC	1 cut(s)	2431
LweI	GCATC	8 cut(s)	44, 252, 565, 1401, 1756, 2156, 2499, 2637
MabI	ACCWGGT	1 cut(s)	1951
MaeI	CTAG	9 cut(s)	96, 570, 671, 1212, 1353, 1551, 1814, 2019, 2573
MaeII	ACGT	6 cut(s)	45, 1112, 1308, 1368, 1690, 1978
MaeIII	GTNAC	7 cut(s)	145, 641, 811, 1348, 1955, 2308, 2455
MbiI	CCGCTC	1 cut(s)	1524
MfeI	CAATTG	1 cut(s)	1044
MflI	RGATCY	4 cut(s)	174, 307, 665, 2833
MhlI	GDGCHC	8 cut(s)	914, 936, 1219, 1250, 1538, 2208, 2710, 2800
MlsI	TGGCCA	1 cut(s)	2749
MluNI	TGGCCA	1 cut(s)	2749
MlyI	GAGTC	3 cut(s)	1913, 2026, 2519
MmeI	TCCRAC	6 cut(s)	377, 403, 472, 699, 764, 1896
Mox20I	TGGCCA	1 cut(s)	2749
Mph1103I	ATGCAT	1 cut(s)	2171
MroXI	GAANNNNTTC	1 cut(s)	215
MscI	TGGCCA	1 cut(s)	2749
MseI	TTAA	6 cut(s)	369, 993, 1698, 1796, 2550, 2729
MslI	CAYNNNNRTG	6 cut(s)	515, 818, 1371, 1514, 2249, 2854
Msp20I	TGGCCA	1 cut(s)	2749
MspI	CCGG	4 cut(s)	1444, 1850, 1885, 2372
MspR9I	CCNGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
MunI	CAATTG	1 cut(s)	1044
Mva1269I	GAATGC	1 cut(s)	2169
MvaI	CCWGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
MwoI	GCNNNNNNNGC	2 cut(s)	167, 2690
NcoI	CCATGG	1 cut(s)	1242
NlaIV	GGNNCC	2 cut(s)	1448, 1537
NmuCI	GTSAC	5 cut(s)	641, 811, 1955, 2308, 2455
NsiI	ATGCAT	1 cut(s)	2171
NspI	RCATGY	4 cut(s)	185, 808, 1720, 1963
NspV	TTCGAA	1 cut(s)	2605
OliI	CACNNNNGTG	3 cut(s)	818, 1371, 1514
PaeI	GCATGC	1 cut(s)	185
PagI	TCATGA	5 cut(s)	313, 951, 1077, 2643, 2787
PaqCI	CACCTGC	2 cut(s)	40, 2641
PcsI	WCGNNNNNNNCGW	1 cut(s)	399
PctI	GAATGC	1 cut(s)	2169
PdmI	GAANNNNTTC	1 cut(s)	215
PfeI	GAWTC	6 cut(s)	124, 288, 707, 1224, 2387, 2845
PflMI	CCANNNNNTGG	1 cut(s)	470
PkrI	GCNGC	4 cut(s)	555, 2343, 2370, 2446
PleI	GAGTC	3 cut(s)	1912, 2026, 2518
PpsI	GAGTC	3 cut(s)	1912, 2026, 2518
Psp124BI	GAGCTC	1 cut(s)	2208
Psp6I	CCWGG	9 cut(s)	152, 292, 560, 637, 876, 1003, 1951, 2485, 2744
PspEI	GGTNACC	1 cut(s)	2455
PspFI	CCCAGC	1 cut(s)	2762
PspGI	CCWGG	9 cut(s)	152, 292, 560, 637, 876, 1003, 1951, 2485, 2744
PspN4I	GGNNCC	2 cut(s)	1448, 1537
PspPI	GGNCC	8 cut(s)	399, 461, 589, 853, 880, 1461, 1607, 1993
PsuI	RGATCY	4 cut(s)	174, 307, 665, 2833
RseI	CAYNNNNRTG	6 cut(s)	515, 818, 1371, 1514, 2249, 2854
SacI	GAGCTC	1 cut(s)	2208
SaqAI	TTAA	6 cut(s)	369, 993, 1698, 1796, 2550, 2729
SatI	GCNGC	4 cut(s)	554, 2342, 2369, 2445
Sau96I	GGNCC	8 cut(s)	399, 461, 589, 853, 880, 1461, 1607, 1993
ScaI	AGTACT	3 cut(s)	100, 1911, 2828
SchI	GAGTC	3 cut(s)	1913, 2026, 2519
ScrFI	CCNGG	9 cut(s)	154, 294, 562, 639, 878, 1005, 1953, 2487, 2746
SduI	GDGCHC	8 cut(s)	914, 936, 1219, 1250, 1538, 2208, 2710, 2800
SexAI	ACCWGGT	1 cut(s)	1951
SfaNI	GCATC	8 cut(s)	44, 252, 565, 1401, 1756, 2156, 2499, 2637
SfcI	CTRYAG	1 cut(s)	957
SfuI	TTCGAA	1 cut(s)	2605
SinI	GGWCC	4 cut(s)	399, 589, 880, 1607
SmiMI	CAYNNNNRTG	6 cut(s)	515, 818, 1371, 1514, 2249, 2854
SmlI	CTYRAG	4 cut(s)	536, 907, 1733, 2563
SmoI	CTYRAG	4 cut(s)	536, 907, 1733, 2563
SpeI	ACTAGT	3 cut(s)	95, 569, 1352
SphI	GCATGC	1 cut(s)	185
SsiI	CCGC	8 cut(s)	285, 554, 592, 1142, 1524, 1868, 2342, 2369
SspI	AATATT	3 cut(s)	1261, 1623, 1800
SspMI	CTAG	9 cut(s)	96, 570, 671, 1212, 1353, 1551, 1814, 2019, 2573
SstI	GAGCTC	1 cut(s)	2208
StyD4I	CCNGG	9 cut(s)	152, 292, 560, 637, 876, 1003, 1951, 2485, 2744
StyI	CCWWGG	3 cut(s)	1242, 2256, 2400
TaaI	ACNGT	7 cut(s)	403, 439, 745, 1458, 1574, 1914, 2272
TaiI	ACGT	6 cut(s)	48, 1115, 1311, 1371, 1693, 1981
TaqI	TCGA	9 cut(s)	319, 393, 698, 747, 1335, 2240, 2283, 2605, 2611
TatI	WGTACW	6 cut(s)	98, 649, 866, 1909, 2190, 2826
TauI	GCSGC	3 cut(s)	556, 2344, 2371
TfiI	GAWTC	6 cut(s)	124, 288, 707, 1224, 2387, 2845
Tru1I	TTAA	6 cut(s)	369, 993, 1698, 1796, 2550, 2729
Tru9I	TTAA	6 cut(s)	369, 993, 1698, 1796, 2550, 2729
TscAI	CASTG	6 cut(s)	287, 331, 1579, 1837, 1977, 2270
TseFI	GTSAC	5 cut(s)	641, 811, 1955, 2308, 2455
TseI	GCWGC	1 cut(s)	2444
Tsp45I	GTSAC	5 cut(s)	641, 811, 1955, 2308, 2455
TspGWI	ACGGA	2 cut(s)	538, 967
TspRI	CASTG	6 cut(s)	287, 331, 1579, 1837, 1977, 2270
Van91I	CCANNNNNTGG	1 cut(s)	470
VpaK11BI	GGWCC	4 cut(s)	399, 589, 880, 1607
XagI	CCTNNNNNAGG	1 cut(s)	1782
XapI	RAATTY	2 cut(s)	734, 1492
XceI	RCATGY	4 cut(s)	185, 808, 1720, 1963
XcmI	CCANNNNNNNNNTGG	2 cut(s)	471, 1471
XmnI	GAANNNNTTC	1 cut(s)	215
XspI	CTAG	9 cut(s)	96, 570, 671, 1212, 1353, 1551, 1814, 2019, 2573
ZrmI	AGTACT	3 cut(s)	100, 1911, 2828
Zsp2I	ATGCAT	1 cut(s)	2171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.