Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0034511.1

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

140 .. 3962

Gene Structure 3823 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0034511.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3222 bp

atgacagacatcgcaagccctgtgcaccagttcgacctcgagtctcagcatacagtgttgctgaaaaccagtagtactaacccaccaatagaccactggcgctggatttatgtgattctccaagtgcgcaaactcctcatctcatccagagccaacaaacctaaaaacgggtctcaaccacctcaccacctctcatcagctacaatcccttatgctattatcagcaccagcactactactggagatgcggacttgcaactgacatcagggactacagaaatcttacctgcctcgcctcaattttctggagatgtccatcggatcggggaggatgattgtagtactgctgctactgatgcaaaactccagcgtacaaatattgccaagatagtcacggagaaagactttgagtctttacagaagtttggatgcgtccaaggaattgcagaggcacttaatagcgatttacagaatggaatcccaggcaatgaagaagatgtgagttctcgccgcccagttagtgccctcttaaccacgcaggctcctgttcaaggcttcttcaaactgctcctacagtccagcaacaactacatcattttccttctcttggtggctgcagtgctgtcgattggctttggtatgaaggaggaaggcccaagcaccggttggtatgaaggggccatcatagcgtttgtcatcatcatactcgttgttgcgccttccatacgcgacttttggcttcaaaatccacagagccatgcaatgagacagactgcaggggccattaaaatggtggttgaggtcatcagagggggatccccatgtgaaatacccacatgtgatgttgtttcaggtgacatagtgtgcttgacacggggatctacagttcccggtgatggtttgtttgtttctggtaagttcttcgtattggatgatggtacagtggcaaccatttatgaacagaaaccattcttgttctgtggttcaaaggtggttggtggaagtggtcgcatgcttgtaacgtctgcgggcatgaacacagcatggggtgagctgatgaacaaagtagccaatactcctgaccgggctcatttaccagctcaacttgataaggtcagcacaggcacgcagattatagggatctcaatctctattctcatcctggtagtgttgttctcccgtttcatggttgaaagggaagacaatcactctggcctcccagaccttagggggaaaccaactgcaagcaaggagataatgaatttaattgagaaaattgtgatgaaaccaagtggtcggatcagtatcctaacgacatctctggctatattcctcgtaggagtggtggaaggaatacctctttttgttacacttgccatcaggtattggaataataagactttatctggaaaggccactgctcaagggactttggcgtgtgtcaccatgggctctatcacaactatttgcacagacaaaactggcgtgcttaccttgaacacacaggaagtggacaagtgctacatcggggatgaagtcatagaaaccgactatgtcactggagtagacacacatgttcgtgaagctttgtgcaatggaatcagcacaccccttctgatgccatcaaaccctcattgtagctcgagagaggatccgcttctttcctgggctgagttcaatttgggaatgcaatatgagattttgaggcaaaatcacgacatcctggaaaccaaaggattgagcaccaacgaggaaggcagtggagtactgatgagaagaagcagtactgacaatgagggagatatgcgcttgcattggaaaggacctgcaacaacaatattagccatgtgttcgcactacaatgacaacaaaggggaaacaaaggtcatggatgaacaaagtacattggtttttaaccaaattatagagggcatgcagtccaaatatctcaagaccattgcatttgcttacagacagactgaggtttcagtgctagaagaaaacagcttaatcttaatagcactgctaggtgtgaggtattcatgctgcaccgatatagtggaagcttatgaagaagcaggagtcaacatcatactgatctcagaagataatgtttcagacctgaaagacattgctcgtgagtgtggaatacttctgaacccaaacagattggtagttgaaggtaaaagttttcgaaatagtgcccaagaaaacaggatggacatggcagataaaatatgtgtgatgggaaactccattccttctgacaggctccttttggtgcaatgtctgaaagaaagaggccatgtcgtagcaatggttggagtcggaacaaatgatgctccaactctgaaagaagctgatgtgggcattgcaatggggacttggagtaatggagtggcaagagagagttctgacatcatcatctgggaaggaaatgttagtttcttggtcaccattattgggtgtggaagaagcatatactataacattcagaagtacattcaacttgagctcaccatgaatatatcatggctgttgataacatccgctaccacaatgtgcttaggacaaagtgcaattgcagccatacaattggtctgggcaaacatgattgtgactcttctaggtgggcttgctctattgatggagcctccaacggaggaactaatgaaaaaggcaccggtcaagcaaaatgaatctctcattagcaaggcaatgtggagaaacatagtcagtcaagctttatatcagactaccatcttggtcgcctttcaattcaaaggaccaactatcccaggcatcagcaagaaggtcagtgagtccattgttttcaacagttttgttctctgtcaggtattcaaccaagtgaattcaagggaactcgagaagaaaaacgtatttaggggcatatttcacaatctgttgttttgggtggctgtgggtgccattcttatcctgcaggtgggttttgttgagattgcacacattctggttggcaatgcaaggttgaattgggcagagtggggtatctgtcttctaattgggatggtttcatgggcagttgatttggtagttaagtttgcaaccagtttcatacttagctctgcaggatccattagtatgcctatgacaccctctaatgtttcagaatccgcccttaatctagagctcccactcattaatgaaattccacatgaatcccatcttaggctgtattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1073

Amino Acids

117.26

Weight (kDa)

5.49

Isoelectric Point (pI)

34.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2953
Acc16I	TGCGCA	1 cut(s)	128
Acc36I	ACCTGC	3 cut(s)	295, 1834, 2953
AccB1I	GGYRCC	2 cut(s)	2680, 2945
AccI	GTMKAC	1 cut(s)	1566
AccII	CGCG	1 cut(s)	729
AciI	CCGC	6 cut(s)	248, 511, 1028, 1655, 2550, 3156
AcsI	RAATTY	3 cut(s)	1261, 2872, 3189
AdeI	CACNNNGTG	1 cut(s)	2562
AfaI	GTAC	8 cut(s)	76, 343, 373, 940, 1767, 1786, 1903, 2501
AfiI	CCNNNNNNNGG	9 cut(s)	167, 551, 607, 662, 896, 1186, 2463, 2965, 3210
AflIII	ACRYGT	2 cut(s)	836, 1573
AgeI	ACCGGT	2 cut(s)	662, 2683
AhdI	GACNNNNNGTC	2 cut(s)	40, 409
AjnI	CCWGG	5 cut(s)	481, 1161, 1664, 1722, 2797
AloI	GAACNNNNNNTCC	2 cut(s)	870, 902
Alw21I	GWGCWC	4 cut(s)	27, 1745, 2517, 3174
Alw26I	GTCTC	3 cut(s)	48, 177, 760
Alw44I	GTGCAC	1 cut(s)	23
Ama87I	CYCGRG	3 cut(s)	38, 1642, 2885
AoxI	GGCC	6 cut(s)	652, 678, 780, 1213, 1413, 2302
ApaLI	GTGCAC	1 cut(s)	23
ApeKI	GCWGC	4 cut(s)	347, 614, 2046, 2585
ApoI	RAATTY	3 cut(s)	1261, 2872, 3189
AseI	ATTAAT	1 cut(s)	3183
AsiGI	ACCGGT	2 cut(s)	662, 2683
Asp700I	GAANNNNTTC	1 cut(s)	968
AspLEI	GCGC	4 cut(s)	102, 129, 718, 1809
AspS9I	GGNCC	5 cut(s)	653, 678, 780, 1823, 2786
AsuC2I	CCSGG	2 cut(s)	891, 1085
AsuHPI	GGTGA	7 cut(s)	176, 866, 905, 1061, 1435, 2446, 2509
AsuII	TTCGAA	1 cut(s)	2194
AvaI	CYCGRG	3 cut(s)	38, 1642, 2885
AvaII	GGWCC	2 cut(s)	1823, 2786
AxyI	CCTNAGG	1 cut(s)	1226
BaeGI	GKGCMC	3 cut(s)	27, 526, 2206
BamHI	GGATCC	3 cut(s)	815, 1651, 3113
BanI	GGYRCC	2 cut(s)	2680, 2945
BanII	GRGCYC	4 cut(s)	1090, 1454, 2517, 3174
BarI	GAAGNNNNNNTAC	2 cut(s)	1768, 1800
BauI	CACGAG	1 cut(s)	2136
BbsI	GAAGAC	2 cut(s)	1206, 3029
Bbv12I	GWGCWC	4 cut(s)	27, 1745, 2517, 3174
BbvI	GCAGC	4 cut(s)	334, 601, 2033, 2597
BcgI	CGANNNNNNTGC	2 cut(s)	606, 640
BciT130I	CCWGG	5 cut(s)	483, 1163, 1666, 1724, 2799
BciVI	GTATCC	1 cut(s)	1316
BcnI	CCSGG	2 cut(s)	891, 1085
BcoDI	GTCTC	3 cut(s)	48, 177, 760
BfaI	CTAG	4 cut(s)	1994, 2027, 2627, 3167
BfmI	CTRYAG	7 cut(s)	273, 572, 615, 774, 882, 2960, 3108
BfoI	RGCGCY	1 cut(s)	103
BfuAI	ACCTGC	3 cut(s)	295, 1834, 2953
BfuI	GTATCC	1 cut(s)	1316
BisI	GCNGC	5 cut(s)	348, 511, 615, 2047, 2586
BlsI	GCNGC	5 cut(s)	349, 512, 616, 2048, 2587
BmcAI	AGTACT	4 cut(s)	76, 343, 1767, 1786
Bme1390I	CCNGG	7 cut(s)	483, 891, 1085, 1163, 1666, 1724, 2799
Bme18I	GGWCC	2 cut(s)	1823, 2786
BmeRI	GACNNNNNGTC	2 cut(s)	40, 409
BmeT110I	CYCGRG	3 cut(s)	38, 1642, 2885
BmgT120I	GGNCC	5 cut(s)	653, 678, 780, 1823, 2786
BmrFI	CCNGG	7 cut(s)	483, 891, 1085, 1163, 1666, 1724, 2799
BmrI	ACTGGG	1 cut(s)	509
BmsI	GCATC	6 cut(s)	235, 346, 419, 1608, 2329, 2811
BmuI	ACTGGG	1 cut(s)	509
BpiI	GAAGAC	2 cut(s)	1206, 3029
BpmI	CTGGAG	4 cut(s)	261, 327, 350, 1581
Bpu10I	CCTNAGC	1 cut(s)	2566
Bpu14I	TTCGAA	1 cut(s)	2194
BpuEI	CTTGAG	3 cut(s)	1407, 1934, 2531
BpuMI	CCSGG	2 cut(s)	891, 1085
BsaBI	GATNNNNATC	3 cut(s)	315, 1145, 1304
BsaI	GGTCTC	1 cut(s)	177
BsaJI	CCNNGG	5 cut(s)	436, 481, 1446, 1665, 2797
BsaWI	WCCGGW	2 cut(s)	662, 2683
BsaXI	ACNNNNNCTCC	2 cut(s)	526, 556
Bsc4I	CCNNNNNNNGG	9 cut(s)	167, 551, 607, 662, 896, 1186, 2463, 2965, 3210
Bse118I	RCCGGY	2 cut(s)	662, 2683
Bse1I	ACTGG	8 cut(s)	28, 69, 101, 244, 515, 1486, 1564, 3090
Bse21I	CCTNAGG	1 cut(s)	1226
Bse8I	GATNNNNATC	3 cut(s)	315, 1145, 1304
BseBI	CCWGG	5 cut(s)	483, 1163, 1666, 1724, 2799
BseDI	CCNNGG	5 cut(s)	436, 481, 1446, 1665, 2797
BseJI	GATNNNNATC	3 cut(s)	315, 1145, 1304
BseLI	CCNNNNNNNGG	9 cut(s)	167, 551, 607, 662, 896, 1186, 2463, 2965, 3210
BseMII	CTCAG	4 cut(s)	59, 1662, 1971, 2115
BseNI	ACTGG	8 cut(s)	28, 69, 101, 244, 515, 1486, 1564, 3090
BseRI	GAGGAG	1 cut(s)	125
BseSI	GKGCMC	3 cut(s)	27, 526, 2206
BseXI	GCAGC	4 cut(s)	334, 601, 2033, 2597
BsgI	GTGCAG	1 cut(s)	2032
Bsh1236I	CGCG	1 cut(s)	729
BshFI	GGCC	6 cut(s)	654, 680, 782, 1215, 1415, 2304
BshNI	GGYRCC	2 cut(s)	2680, 2945
BshTI	ACCGGT	2 cut(s)	662, 2683
BsiHKAI	GWGCWC	4 cut(s)	27, 1745, 2517, 3174
BsiHKCI	CYCGRG	3 cut(s)	38, 1642, 2885
BsiSI	CCGG	4 cut(s)	663, 891, 1084, 2684
BslFI	GGGAC	3 cut(s)	283, 1441, 2395
BslI	CCNNNNNNNGG	9 cut(s)	167, 551, 607, 662, 896, 1186, 2463, 2965, 3210
BsmAI	GTCTC	3 cut(s)	48, 177, 760
BsmFI	GGGAC	3 cut(s)	283, 1441, 2395
BsmI	GAATGC	1 cut(s)	1692
BsnI	GGCC	6 cut(s)	654, 680, 782, 1215, 1415, 2304
Bso31I	GGTCTC	1 cut(s)	177
BsoBI	CYCGRG	3 cut(s)	38, 1642, 2885
Bsp119I	TTCGAA	1 cut(s)	2194
Bsp1286I	GDGCHC	8 cut(s)	27, 526, 1090, 1454, 1745, 2206, 2517, 3174
Bsp143I	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
Bsp19I	CCATGG	1 cut(s)	1446
BspACI	CCGC	6 cut(s)	248, 511, 1028, 1655, 2550, 3156
BspANI	GGCC	6 cut(s)	654, 680, 782, 1215, 1415, 2304
BspCNI	CTCAG	4 cut(s)	58, 1663, 1972, 2114
BspFNI	CGCG	1 cut(s)	729
BspMAI	CTGCAG	4 cut(s)	619, 778, 2964, 3112
BspMI	ACCTGC	3 cut(s)	295, 1834, 2953
BspT104I	TTCGAA	1 cut(s)	2194
BspT107I	GGYRCC	2 cut(s)	2680, 2945
BspTNI	GGTCTC	1 cut(s)	177
BsrFI	RCCGGY	2 cut(s)	662, 2683
BsrI	ACTGG	8 cut(s)	28, 69, 101, 244, 515, 1486, 1564, 3090
BssAI	RCCGGY	2 cut(s)	662, 2683
BssECI	CCNNGG	5 cut(s)	436, 481, 1446, 1665, 2797
BssMI	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
BssSI	CACGAG	1 cut(s)	2136
BssT1I	CCWWGG	2 cut(s)	436, 1446
Bst2BI	CACGAG	1 cut(s)	2136
Bst2UI	CCWGG	5 cut(s)	483, 1163, 1666, 1724, 2799
Bst4CI	ACNGT	5 cut(s)	55, 576, 886, 943, 2840
Bst6I	CTCTTC	1 cut(s)	2628
BstBI	TTCGAA	1 cut(s)	2194
BstDEI	CTNAG	8 cut(s)	45, 1226, 1671, 1980, 2101, 2566, 3101, 3209
BstDSI	CCRYGG	1 cut(s)	1446
BstEII	GGTNACC	1 cut(s)	2452
BstENI	CCTNNNNNAGG	1 cut(s)	549
BstFNI	CGCG	1 cut(s)	729
BstH2I	RGCGCY	1 cut(s)	103
BstHHI	GCGC	4 cut(s)	102, 129, 718, 1809
BstKTI	GATC	8 cut(s)	324, 818, 881, 1143, 1302, 1654, 2100, 3116
BstMAI	GTCTC	3 cut(s)	48, 177, 760
BstMBI	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
BstMWI	GCNNNNNNNGC	4 cut(s)	356, 686, 2585, 2945
BstNI	CCWGG	5 cut(s)	483, 1163, 1666, 1724, 2799
BstNSI	RCATGY	4 cut(s)	840, 1015, 1577, 1936
BstPI	GGTNACC	1 cut(s)	2452
BstSCI	CCNGG	7 cut(s)	481, 889, 1083, 1161, 1664, 1722, 2797
BstSFI	CTRYAG	7 cut(s)	273, 572, 615, 774, 882, 2960, 3108
BstSLI	GKGCMC	3 cut(s)	27, 526, 2206
BstUI	CGCG	1 cut(s)	729
BstV1I	GCAGC	4 cut(s)	334, 601, 2033, 2597
BstV2I	GAAGAC	2 cut(s)	1206, 3029
BstX2I	RGATCY	5 cut(s)	815, 878, 1140, 1651, 3113
BstXI	CCANNNNNNTGG	2 cut(s)	790, 2596
BstYI	RGATCY	5 cut(s)	815, 878, 1140, 1651, 3113
Bsu36I	CCTNAGG	1 cut(s)	1226
BsuI	GTATCC	1 cut(s)	1316
BsuRI	GGCC	6 cut(s)	654, 680, 782, 1215, 1415, 2304
BtgI	CCRYGG	1 cut(s)	1446
BtsI	GCAGTG	4 cut(s)	624, 1416, 1765, 2021
BveI	ACCTGC	3 cut(s)	295, 1834, 2953
CfoI	GCGC	4 cut(s)	102, 129, 718, 1809
Cfr10I	RCCGGY	2 cut(s)	662, 2683
Cfr13I	GGNCC	5 cut(s)	653, 678, 780, 1823, 2786
CseI	GACGC	1 cut(s)	421
Csp6I	GTAC	8 cut(s)	75, 342, 372, 939, 1766, 1785, 1902, 2500
CspAI	ACCGGT	2 cut(s)	662, 2683
CviQI	GTAC	8 cut(s)	75, 342, 372, 939, 1766, 1785, 1902, 2500
DdeI	CTNAG	8 cut(s)	45, 1226, 1671, 1980, 2101, 2566, 3101, 3209
DpnI	GATC	8 cut(s)	323, 817, 880, 1142, 1301, 1653, 2099, 3115
DpnII	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
DraIII	CACNNNGTG	1 cut(s)	2562
DriI	GACNNNNNGTC	2 cut(s)	40, 409
Eam1104I	CTCTTC	1 cut(s)	2628
Eam1105I	GACNNNNNGTC	2 cut(s)	40, 409
EarI	CTCTTC	1 cut(s)	2628
EciI	GGCGGA	1 cut(s)	3145
Ecl136II	GAGCTC	2 cut(s)	2515, 3172
Eco130I	CCWWGG	2 cut(s)	436, 1446
Eco24I	GRGCYC	4 cut(s)	1090, 1454, 2517, 3174
Eco31I	GGTCTC	1 cut(s)	177
Eco47I	GGWCC	2 cut(s)	1823, 2786
Eco53kI	GAGCTC	2 cut(s)	2515, 3172
Eco81I	CCTNAGG	1 cut(s)	1226
Eco88I	CYCGRG	3 cut(s)	38, 1642, 2885
Eco91I	GGTNACC	1 cut(s)	2452
EcoICRI	GAGCTC	2 cut(s)	2515, 3172
EcoNI	CCTNNNNNAGG	1 cut(s)	549
EcoO109I	RGGNCCY	1 cut(s)	1823
EcoO65I	GGTNACC	1 cut(s)	2452
EcoRI	GAATTC	1 cut(s)	2872
EcoRII	CCWGG	5 cut(s)	481, 1161, 1664, 1722, 2797
EcoT14I	CCWWGG	2 cut(s)	436, 1446
EcoT38I	GRGCYC	4 cut(s)	1090, 1454, 2517, 3174
ErhI	CCWWGG	2 cut(s)	436, 1446
FaqI	GGGAC	3 cut(s)	283, 1441, 2395
FauI	CCCGC	1 cut(s)	1021
FblI	GTMKAC	1 cut(s)	1566
Fnu4HI	GCNGC	5 cut(s)	348, 511, 615, 2047, 2586
FriOI	GRGCYC	4 cut(s)	1090, 1454, 2517, 3174
Fsp4HI	GCNGC	5 cut(s)	348, 511, 615, 2047, 2586
FspBI	CTAG	4 cut(s)	1994, 2027, 2627, 3167
FspI	TGCGCA	1 cut(s)	128
GlaI	GCGC	4 cut(s)	101, 128, 717, 1808
GluI	GCNGC	5 cut(s)	348, 511, 615, 2047, 2586
GsuI	CTGGAG	4 cut(s)	261, 327, 350, 1581
HaeII	RGCGCY	1 cut(s)	103
HaeIII	GGCC	6 cut(s)	654, 680, 782, 1215, 1415, 2304
HapII	CCGG	4 cut(s)	663, 891, 1084, 2684
HgaI	GACGC	1 cut(s)	421
HhaI	GCGC	4 cut(s)	102, 129, 718, 1809
Hin6I	GCGC	4 cut(s)	100, 127, 716, 1807
HinP1I	GCGC	4 cut(s)	100, 127, 716, 1807
HincII	GTYRAC	1 cut(s)	2086
HindII	GTYRAC	1 cut(s)	2086
HindIII	AAGCTT	3 cut(s)	1584, 2064, 2742
HpaII	CCGG	4 cut(s)	663, 891, 1084, 2684
HphI	GGTGA	7 cut(s)	176, 866, 905, 1061, 1435, 2446, 2509
Hpy166II	GTNNAC	4 cut(s)	25, 1513, 1567, 2086
Hpy8I	GTNNAC	4 cut(s)	25, 1513, 1567, 2086
HpyCH4III	ACNGT	5 cut(s)	55, 576, 886, 943, 2840
HpyCH4IV	ACGT	2 cut(s)	1022, 2898
HpyF10VI	GCNNNNNNNGC	4 cut(s)	356, 686, 2585, 2945
HpyF3I	CTNAG	8 cut(s)	45, 1226, 1671, 1980, 2101, 2566, 3101, 3209
HpySE526I	ACGT	2 cut(s)	1022, 2898
HspAI	GCGC	4 cut(s)	100, 127, 716, 1807
Kzo9I	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
LmnI	GCTCC	6 cut(s)	547, 573, 2277, 2347, 2650, 3177
Lsp1109I	GCAGC	4 cut(s)	334, 601, 2033, 2597
LweI	GCATC	6 cut(s)	235, 346, 419, 1608, 2329, 2811
MaeI	CTAG	4 cut(s)	1994, 2027, 2627, 3167
MaeII	ACGT	2 cut(s)	1022, 2898
MaeIII	GTNAC	8 cut(s)	391, 854, 1018, 1366, 1441, 1555, 2452, 2617
MalI	GATC	8 cut(s)	323, 817, 880, 1142, 1301, 1653, 2099, 3115
MboI	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
MfeI	CAATTG	2 cut(s)	2580, 2594
MflI	RGATCY	5 cut(s)	815, 878, 1140, 1651, 3113
MhlI	GDGCHC	8 cut(s)	27, 526, 1090, 1454, 1745, 2206, 2517, 3174
MlyI	GAGTC	6 cut(s)	50, 419, 2091, 2334, 2614, 2831
MmeI	TCCRAC	5 cut(s)	1277, 2302, 2308, 2369, 2681
MroXI	GAANNNNTTC	1 cut(s)	968
MslI	CAYNNNNRTG	6 cut(s)	788, 1578, 1860, 2375, 2615, 3122
MspI	CCGG	4 cut(s)	663, 891, 1084, 2684
MspR9I	CCNGG	7 cut(s)	483, 891, 1085, 1163, 1666, 1724, 2799
MunI	CAATTG	2 cut(s)	2580, 2594
Mva1269I	GAATGC	1 cut(s)	1692
MvaI	CCWGG	5 cut(s)	483, 1163, 1666, 1724, 2799
MvnI	CGCG	1 cut(s)	729
MwoI	GCNNNNNNNGC	4 cut(s)	356, 686, 2585, 2945
NciI	CCSGG	2 cut(s)	891, 1085
NcoI	CCATGG	1 cut(s)	1446
NdeII	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
NmuCI	GTSAC	6 cut(s)	391, 854, 1441, 1555, 2452, 2617
NsbI	TGCGCA	1 cut(s)	128
NspI	RCATGY	4 cut(s)	840, 1015, 1577, 1936
NspV	TTCGAA	1 cut(s)	2194
PaeI	GCATGC	2 cut(s)	1015, 1936
PaeR7I	CTCGAG	3 cut(s)	38, 1642, 2885
PaqCI	CACCTGC	1 cut(s)	2953
PciI	ACATGT	2 cut(s)	836, 1573
PctI	GAATGC	1 cut(s)	1692
PdmI	GAANNNNTTC	1 cut(s)	968
PfeI	GAWTC	6 cut(s)	115, 477, 1599, 2699, 3152, 3200
PflFI	GACNNNGTC	1 cut(s)	1553
PfoI	TCCNGGA	1 cut(s)	1722
PinAI	ACCGGT	2 cut(s)	662, 2683
PkrI	GCNGC	5 cut(s)	349, 512, 616, 2048, 2587
PleI	GAGTC	6 cut(s)	49, 418, 2090, 2333, 2614, 2830
PpsI	GAGTC	6 cut(s)	49, 418, 2090, 2333, 2614, 2830
PpuMI	RGGWCCY	1 cut(s)	1823
PscI	ACATGT	2 cut(s)	836, 1573
PshBI	ATTAAT	1 cut(s)	3183
Psp124BI	GAGCTC	2 cut(s)	2517, 3174
Psp5II	RGGWCCY	1 cut(s)	1823
Psp6I	CCWGG	5 cut(s)	481, 1161, 1664, 1722, 2797
PspEI	GGTNACC	1 cut(s)	2452
PspGI	CCWGG	5 cut(s)	481, 1161, 1664, 1722, 2797
PspPI	GGNCC	5 cut(s)	653, 678, 780, 1823, 2786
PspPPI	RGGWCCY	1 cut(s)	1823
PspXI	VCTCGAGB	1 cut(s)	38
PstI	CTGCAG	4 cut(s)	619, 778, 2964, 3112
PsuI	RGATCY	5 cut(s)	815, 878, 1140, 1651, 3113
PsyI	GACNNNGTC	1 cut(s)	1553
RsaI	GTAC	8 cut(s)	76, 343, 373, 940, 1767, 1786, 1903, 2501
RsaNI	GTAC	8 cut(s)	75, 342, 372, 939, 1766, 1785, 1902, 2500
RseI	CAYNNNNRTG	6 cut(s)	788, 1578, 1860, 2375, 2615, 3122
SacI	GAGCTC	2 cut(s)	2517, 3174
SatI	GCNGC	5 cut(s)	348, 511, 615, 2047, 2586
Sau3AI	GATC	8 cut(s)	321, 815, 878, 1140, 1299, 1651, 2097, 3113
Sau96I	GGNCC	5 cut(s)	653, 678, 780, 1823, 2786
SbfI	CCTGCAGG	1 cut(s)	2964
ScaI	AGTACT	4 cut(s)	76, 343, 1767, 1786
SchI	GAGTC	6 cut(s)	50, 419, 2091, 2334, 2614, 2831
ScrFI	CCNGG	7 cut(s)	483, 891, 1085, 1163, 1666, 1724, 2799
SdaI	CCTGCAGG	1 cut(s)	2964
SduI	GDGCHC	8 cut(s)	27, 526, 1090, 1454, 1745, 2206, 2517, 3174
SfaNI	GCATC	6 cut(s)	235, 346, 419, 1608, 2329, 2811
SfcI	CTRYAG	7 cut(s)	273, 572, 615, 774, 882, 2960, 3108
Sfr274I	CTCGAG	3 cut(s)	38, 1642, 2885
SfuI	TTCGAA	1 cut(s)	2194
SinI	GGWCC	2 cut(s)	1823, 2786
SlaI	CTCGAG	3 cut(s)	38, 1642, 2885
SmiMI	CAYNNNNRTG	6 cut(s)	788, 1578, 1860, 2375, 2615, 3122
SmlI	CTYRAG	6 cut(s)	38, 1422, 1642, 1949, 2510, 2885
SmoI	CTYRAG	6 cut(s)	38, 1422, 1642, 1949, 2510, 2885
SphI	GCATGC	2 cut(s)	1015, 1936
Sse8387I	CCTGCAGG	1 cut(s)	2964
SsiI	CCGC	6 cut(s)	248, 511, 1028, 1655, 2550, 3156
SspI	AATATT	2 cut(s)	379, 1839
SspMI	CTAG	4 cut(s)	1994, 2027, 2627, 3167
SstI	GAGCTC	2 cut(s)	2517, 3174
StyD4I	CCNGG	7 cut(s)	481, 889, 1083, 1161, 1664, 1722, 2797
StyI	CCWWGG	2 cut(s)	436, 1446
TaaI	ACNGT	5 cut(s)	55, 576, 886, 943, 2840
TaiI	ACGT	2 cut(s)	1025, 2901
TaqI	TCGA	6 cut(s)	33, 39, 626, 1643, 2194, 2886
TatI	WGTACW	6 cut(s)	74, 341, 1765, 1784, 1901, 2499
TauI	GCSGC	1 cut(s)	513
TfiI	GAWTC	6 cut(s)	115, 477, 1599, 2699, 3152, 3200
TseFI	GTSAC	6 cut(s)	391, 854, 1441, 1555, 2452, 2617
TseI	GCWGC	4 cut(s)	347, 614, 2046, 2585
Tsp45I	GTSAC	6 cut(s)	391, 854, 1441, 1555, 2452, 2617
TspGWI	ACGGA	2 cut(s)	410, 2675
Tth111I	GACNNNGTC	1 cut(s)	1553
VneI	GTGCAC	1 cut(s)	23
VpaK11BI	GGWCC	2 cut(s)	1823, 2786
VspI	ATTAAT	1 cut(s)	3183
XagI	CCTNNNNNAGG	1 cut(s)	549
XapI	RAATTY	3 cut(s)	1261, 2872, 3189
XbaI	TCTAGA	1 cut(s)	3166
XceI	RCATGY	4 cut(s)	840, 1015, 1577, 1936
XcmI	CCANNNNNNNNNTGG	3 cut(s)	93, 663, 790
XhoI	CTCGAG	3 cut(s)	38, 1642, 2885
XmiI	GTMKAC	1 cut(s)	1566
XmnI	GAANNNNTTC	1 cut(s)	968
XspI	CTAG	4 cut(s)	1994, 2027, 2627, 3167
ZrmI	AGTACT	4 cut(s)	76, 343, 1767, 1786

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.