Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0019378.1

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Forward (+)

1201 .. 9112

Gene Structure 7912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0019378.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3309 bp

atgagcttccgatttggatttgggaagaatgaaattttgatttgggaagagatctatatctttggctgctcggggcttggcggacggaggccggaggcatcccggactgttctgggcagcgttcgaggtcggagttgcaggtttctgggcagtgaccgcagctgcaactgcaagtttctgggcagcgctgcaaccacttatccggtgactccaccgactgcagaccggtccgtccaaccctggcgtctgtccggcaagccccaccgctccgtcgagctcctagctgagctacagcgtcgacgtccgcactttaacaacagtgccgacgtcctctttggaaccgctccgtattggccggaatcggagaaactcaccggccaacctgagaagctttcaaccttcgatatgccgtcgccgtcggaactggaacttacaagaactacacaccttgcatctgcatcacctcacgtttctaaagcagtatcaagtttgagcgtggaggatgatggtaccatcactagtactacgaccgtttctgaccaagtgaatctgaacattgaggatgacattactaccaggattgctaatgaggctaagatccagcatgcaaatatttccaagatagtaaaggagaaggactttgctaccttacagaagtttgaaggcatcaaaggaattgcagaggcactcagtacagatttacacagcggaatcccaggtgatgaacaagatcttcatgatcgacgcagtgcagtagtcctaacaacacaagctccaactccaagcttctttaaacttctccgacaatcttgtttcgattggaccgttttccttctcttcgtgtgtgtcatcctgtcaactgtatttggtatccagcaggaaggcccaagtaatggttggcttgaaggagctgtcggaatgtttgcaatcatcatacttgtggttgtacctacaatgcgcaagtatttctccatgccacatcccatgaatactagtcaaatgaaaactaaggtccgcagaggaggaaacatgcttcatatctccccatcggatgttgtgccaggtgacatagtatgcttggaattaggatctctagttcctgctgatggtttgttcgtttcgactggtgaatacttggtgttggaagatggtatggaatttccaaccgtcgatgacagcaatccttttctggtttatggtgcaagggtggtaaatggtaatggtcgcatgttggttacttgtgtggggatgaagacaacattaggtgagttgatgggccaagttagatgtacacctaaccaggaccaattaccagctcaacttgataacttgagcacaaggttgcagaatgttgggctcttgatcacaattttcatgactgtagtgcttatcattcgttccgtggttctaaatgttaatgagtaccctggcctccaagctgataagttcaatgctaaaataaccgcaagtgaggagctaatcaatgtcattggcaaatttttcatgaaatcaagtgggcagattagtgtgttggcgacgtatctgcctttattgattgtaggcttagcggaaggagtacctttttcagttgcacttgccatcaattattggactaagaccacgctatctgggaaagctagttctaaaagaatcttagcttgtttcaccatgggctgtgtgtcaaatatttgcattggcgatgggctaactttgaaccctctaattgaagtcgacgtgcgctgtgatggggatcaaataagcgacacagagagtgttgctggtattgatagacacgttcgtgaagctttatacaaaggaattagtacaccacttctgatgccttcaagcccttggagctcaacagaacaccgggtcctgctatcgtgggccaaatctaatttgggtatggacaatgagaatttattgcaaaattgcaccattgtggggagcgaaaagttgagcaccgatgaggaggctagtggagttctgatgaaggacagtgaaactggagaaatgtgcttttattggaatggacctgtaacaacaatattgcccatgtgttccgaatactatgatagcaaggggacaacaaagctcatggatgaacagaagaaaagtgattttaaagaaattatggggaacatgcagtccaaacatctcaagaccattgcatttgcgtacaagaagattgatgctccactgactgaagaaggcaacaacttaatattgataggattgctaggtgtgaagtgttgtactgagacaatggaagcactggaagttctacaaaaagcgggagtggacatcatccagttcccaaaagataaagagtcagtattgtcggaaggtgaaagtcctgtttatggaatgggaagacctgctgacaagctccacacactgcaacgtctgaaggaagagggccatgttgtagcaatggttggggctagaacaaatgagactccagctctaaaagaagccgatgtggggattgcaatagggacttgcattactgaaatggcaagagagggttctgatctcatcatccccgattgcagtctcagtttcttggttaacattattcggatcggaagatgcattcactacaacattcagaagtacatccaagttgagctcaccatgaatatatcattgcttgtgacaatctcgatcactacaatgtcctcgggacattccacagttggggcaatcgaagtagtgtgggtaaatatggttgtgacactatgtgggcttgcgctactagttgagccgccaaccgaggagcagatggaaaagccgccggtaaaacaaactgaatctctcattaccaaggcaatgtggagaaacatattacttcaagccttatatcaggctgccatcttggtcacctttcagttcaaatataaagctctcccaggcatcaacgagaagattatggaggccatagttttcagcagttatgttctttgtcaggtatttaatcaagtcagctcaagggagctagagaagaaaaatgtgttcagagatataattcgaactcgatggttatgggtggctgtgggagttagtatcacaatgcaggtggcttttgttgagattgcacacaaggttgctggcaatgcaaggttgaattgggcacaatggggtgtctgtcttttaatagcgatggtttcctggccaatggatttggctgggaaatgtgtatgggctgtcatcatgaagattagagtacttggatctgatattgaatccaccagtatgaggtcctctgctgtctcagaatcagcttctaatcgagagctcctagtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1102

Amino Acids

121.17

Weight (kDa)

5.8

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3067
AasI	GACNNNNNNGTC	1 cut(s)	230
AatII	GACGTC	2 cut(s)	304, 330
Acc16I	TGCGCA	1 cut(s)	959
Acc36I	ACCTGC	3 cut(s)	129, 2386, 3067
Acc65I	GGTACC	1 cut(s)	509
AccB1I	GGYRCC	1 cut(s)	509
AccB7I	CCANNNNNTGG	1 cut(s)	893
AccBSI	CCGCTC	2 cut(s)	267, 344
AccI	GTMKAC	2 cut(s)	298, 1731
AclWI	GGATC	5 cut(s)	592, 1096, 1758, 2591, 3241
AcoI	YGGCCR	3 cut(s)	353, 376, 3173
AcsI	RAATTY	4 cut(s)	33, 1157, 1496, 1918
AcuI	CTGAAG	2 cut(s)	2226, 2429
AcyI	GRCGYC	3 cut(s)	244, 301, 327
AdeI	CACNNNGTG	1 cut(s)	2744
AfeI	AGCGCT	1 cut(s)	187
AfiI	CCNNNNNNNGG	7 cut(s)	893, 1106, 1944, 2363, 2484, 2700, 3258
AflIII	ACRYGT	1 cut(s)	1792
AgeI	ACCGGT	1 cut(s)	225
AhlI	ACTAGT	3 cut(s)	518, 992, 2758
AjiI	CACGTC	1 cut(s)	1735
AjnI	CCWGG	8 cut(s)	239, 575, 715, 1060, 1299, 1426, 2911, 3170
AleI	CACNNNNGTG	2 cut(s)	1797, 1940
AloI	GAACNNNNNNTCC	8 cut(s)	1080, 1112, 1624, 1656, 1857, 1889, 2132, 2164
Alw21I	GWGCWC	6 cut(s)	279, 1337, 1859, 1964, 2634, 3300
Alw26I	GTCTC	4 cut(s)	2255, 2450, 2561, 3277
AlwI	GGATC	5 cut(s)	592, 1096, 1758, 2591, 3241
Ama87I	CYCGRG	2 cut(s)	70, 2683
Aor51HI	AGCGCT	1 cut(s)	187
ApeKI	GCWGC	7 cut(s)	66, 117, 159, 162, 183, 188, 2870
ApoI	RAATTY	4 cut(s)	33, 1157, 1496, 1918
ArsI	GACNNNNNNTTYG	2 cut(s)	317, 349
AsiGI	ACCGGT	1 cut(s)	225
Asp718I	GGTACC	1 cut(s)	509
AspLEI	GCGC	4 cut(s)	188, 960, 1740, 2755
AsuC2I	CCSGG	2 cut(s)	103, 1871
AsuII	TTCGAA	1 cut(s)	3031
AvaI	CYCGRG	2 cut(s)	70, 2683
AvaII	GGWCC	7 cut(s)	228, 822, 1012, 1303, 1873, 2033, 3261
BaeGI	GKGCMC	1 cut(s)	3136
BalI	TGGCCA	1 cut(s)	3175
BanI	GGYRCC	1 cut(s)	509
BanII	GRGCYC	5 cut(s)	279, 1359, 1859, 2634, 3300
BbsI	GAAGAC	2 cut(s)	1259, 2380
Bbv12I	GWGCWC	6 cut(s)	279, 1337, 1859, 1964, 2634, 3300
BbvI	GCAGC	7 cut(s)	53, 129, 149, 171, 175, 195, 2857
BceAI	ACGGC	2 cut(s)	394, 400
BcgI	CGANNNNNNTGC	2 cut(s)	1525, 1559
BciT130I	CCWGG	8 cut(s)	241, 577, 717, 1062, 1301, 1428, 2913, 3172
BciVI	GTATCC	1 cut(s)	881
BclI	TGATCA	1 cut(s)	1362
BcnI	CCSGG	2 cut(s)	103, 1871
BcoDI	GTCTC	4 cut(s)	2255, 2450, 2561, 3277
BcuI	ACTAGT	3 cut(s)	518, 992, 2758
BfmI	CTRYAG	3 cut(s)	219, 290, 1380
BfoI	RGCGCY	1 cut(s)	189
BfuAI	ACCTGC	3 cut(s)	129, 2386, 3067
BfuI	GTATCC	1 cut(s)	881
BglII	AGATCT	2 cut(s)	51, 730
BisI	GCNGC	9 cut(s)	67, 118, 160, 163, 184, 189, 2768, 2795, 2871
BlpI	GCTNAGC	2 cut(s)	285, 1564
BlsI	GCNGC	9 cut(s)	68, 119, 161, 164, 185, 190, 2769, 2796, 2872
BmcAI	AGTACT	2 cut(s)	523, 3228
Bme18I	GGWCC	7 cut(s)	228, 822, 1012, 1303, 1873, 2033, 3261
BmeT110I	CYCGRG	2 cut(s)	70, 2683
BmgBI	CACGTC	1 cut(s)	1735
BmiI	GGNNCC	3 cut(s)	340, 511, 1874
BmsI	GCATC	8 cut(s)	107, 461, 467, 675, 1827, 2182, 2582, 2925
BpiI	GAAGAC	2 cut(s)	1259, 2380
BpmI	CTGGAG	2 cut(s)	2028, 2445
Bpu1102I	GCTNAGC	2 cut(s)	285, 1564
Bpu14I	TTCGAA	1 cut(s)	3031
BpuEI	CTTGAG	3 cut(s)	1351, 2144, 2974
BpuMI	CCSGG	2 cut(s)	103, 1871
BsaBI	GATNNNNATC	2 cut(s)	56, 1749
BsaHI	GRCGYC	3 cut(s)	244, 301, 327
BsaWI	WCCGGW	2 cut(s)	202, 225
BsaXI	ACNNNNNCTCC	2 cut(s)	757, 787
Bsc4I	CCNNNNNNNGG	7 cut(s)	893, 1106, 1944, 2363, 2484, 2700, 3258
Bse118I	RCCGGY	3 cut(s)	225, 374, 2797
Bse1I	ACTGG	6 cut(s)	429, 1129, 2011, 2280, 2311, 3252
Bse3DI	GCAATG	5 cut(s)	2166, 2439, 2648, 2838, 3121
Bse8I	GATNNNNATC	2 cut(s)	56, 1749
BseBI	CCWGG	8 cut(s)	241, 577, 717, 1062, 1301, 1428, 2913, 3172
BseJI	GATNNNNATC	2 cut(s)	56, 1749
BseLI	CCNNNNNNNGG	7 cut(s)	893, 1106, 1944, 2363, 2484, 2700, 3258
BseMI	GCAATG	5 cut(s)	2166, 2439, 2648, 2838, 3121
BseMII	CTCAG	6 cut(s)	276, 375, 703, 2250, 2572, 3288
BseNI	ACTGG	6 cut(s)	429, 1129, 2011, 2280, 2311, 3252
BseRI	GAGGAG	4 cut(s)	1035, 1487, 1985, 2792
BseSI	GKGCMC	1 cut(s)	3136
BseXI	GCAGC	7 cut(s)	53, 129, 149, 171, 175, 195, 2857
BseYI	CCCAGC	1 cut(s)	3188
BsgI	GTGCAG	1 cut(s)	771
Bsh1285I	CGRYCG	1 cut(s)	531
BshNI	GGYRCC	1 cut(s)	509
BshTI	ACCGGT	1 cut(s)	225
BsiEI	CGRYCG	1 cut(s)	531
BsiHKAI	GWGCWC	6 cut(s)	279, 1337, 1859, 1964, 2634, 3300
BsiHKCI	CYCGRG	2 cut(s)	70, 2683
BsiSI	CCGG	9 cut(s)	92, 103, 203, 226, 252, 356, 375, 1870, 2798
BslFI	GGGAC	3 cut(s)	2098, 2512, 2700
BslI	CCNNNNNNNGG	7 cut(s)	893, 1106, 1944, 2363, 2484, 2700, 3258
BsmAI	GTCTC	4 cut(s)	2255, 2450, 2561, 3277
BsmFI	GGGAC	3 cut(s)	2098, 2512, 2700
BsmI	GAATGC	1 cut(s)	2595
BsoBI	CYCGRG	2 cut(s)	70, 2683
Bsp119I	TTCGAA	1 cut(s)	3031
Bsp1286I	GDGCHC	8 cut(s)	279, 1337, 1359, 1859, 1964, 2634, 3136, 3300
Bsp1407I	TGTACA	1 cut(s)	1289
Bsp1720I	GCTNAGC	2 cut(s)	285, 1564
Bsp19I	CCATGG	1 cut(s)	1668
BspCNI	CTCAG	6 cut(s)	277, 376, 702, 2251, 2571, 3287
BspHI	TCATGA	4 cut(s)	736, 1374, 1503, 3213
BspLI	GGNNCC	3 cut(s)	340, 511, 1874
BspMAI	CTGCAG	1 cut(s)	223
BspMI	ACCTGC	3 cut(s)	129, 2386, 3067
BspPI	GGATC	5 cut(s)	592, 1096, 1758, 2591, 3241
BspT104I	TTCGAA	1 cut(s)	3031
BspT107I	GGYRCC	1 cut(s)	509
BsrBI	CCGCTC	2 cut(s)	267, 344
BsrDI	GCAATG	5 cut(s)	2166, 2439, 2648, 2838, 3121
BsrFI	RCCGGY	3 cut(s)	225, 374, 2797
BsrGI	TGTACA	1 cut(s)	1289
BsrI	ACTGG	6 cut(s)	429, 1129, 2011, 2280, 2311, 3252
BssAI	RCCGGY	3 cut(s)	225, 374, 2797
BssNI	GRCGYC	3 cut(s)	244, 301, 327
BssT1I	CCWWGG	3 cut(s)	1668, 1850, 2826
Bst2UI	CCWGG	8 cut(s)	241, 577, 717, 1062, 1301, 1428, 2913, 3172
Bst4CI	ACNGT	9 cut(s)	109, 320, 532, 826, 862, 1168, 1381, 2000, 2698
Bst6I	CTCTTC	3 cut(s)	42, 842, 2409
BstACI	GRCGYC	3 cut(s)	244, 301, 327
BstAUI	TGTACA	1 cut(s)	1289
BstBI	TTCGAA	1 cut(s)	3031
BstC8I	GCNNGC	4 cut(s)	257, 606, 2751, 3112
BstDSI	CCRYGG	2 cut(s)	1401, 1668
BstEII	GGTNACC	1 cut(s)	2881
BstH2I	RGCGCY	1 cut(s)	189
BstHHI	GCGC	4 cut(s)	188, 960, 1740, 2755
BstMAI	GTCTC	4 cut(s)	2255, 2450, 2561, 3277
BstMCI	CGRYCG	1 cut(s)	531
BstMWI	GCNNNNNNNGC	5 cut(s)	156, 168, 590, 1854, 3116
BstNI	CCWGG	8 cut(s)	241, 577, 717, 1062, 1301, 1428, 2913, 3172
BstNSI	RCATGY	4 cut(s)	608, 1033, 1231, 2146
BstPI	GGTNACC	1 cut(s)	2881
BstSFI	CTRYAG	3 cut(s)	219, 290, 1380
BstSLI	GKGCMC	1 cut(s)	3136
BstV1I	GCAGC	7 cut(s)	53, 129, 149, 171, 175, 195, 2857
BstV2I	GAAGAC	2 cut(s)	1259, 2380
BstX2I	RGATCY	5 cut(s)	51, 597, 730, 1088, 3233
BstYI	RGATCY	5 cut(s)	51, 597, 730, 1088, 3233
BsuI	GTATCC	1 cut(s)	881
BtgI	CCRYGG	2 cut(s)	1401, 1668
BtgZI	GCGATG	2 cut(s)	1713, 3176
BtrI	CACGTC	1 cut(s)	1735
BtsI	GCAGTG	3 cut(s)	157, 754, 2396
BtsIMutI	CAGTG	7 cut(s)	157, 325, 754, 2005, 2198, 2273, 2396
BveI	ACCTGC	3 cut(s)	129, 2386, 3067
Cac8I	GCNNGC	4 cut(s)	257, 606, 2751, 3112
CciI	TCATGA	4 cut(s)	736, 1374, 1503, 3213
CfoI	GCGC	4 cut(s)	188, 960, 1740, 2755
Cfr10I	RCCGGY	3 cut(s)	225, 374, 2797
CpoI	CGGWCCG	1 cut(s)	228
CseI	GACGC	3 cut(s)	233, 284, 753
CspAI	ACCGGT	1 cut(s)	225
CspCI	CAANNNNNGTGG	2 cut(s)	3060, 3095
CspI	CGGWCCG	1 cut(s)	228
DraI	TTTAAA	2 cut(s)	793, 2125
DraIII	CACNNNGTG	1 cut(s)	2744
DrdI	GACNNNNNNGTC	1 cut(s)	230
DseDI	GACNNNNNNGTC	1 cut(s)	230
EaeI	YGGCCR	3 cut(s)	353, 376, 3173
Eam1104I	CTCTTC	3 cut(s)	42, 842, 2409
EarI	CTCTTC	3 cut(s)	42, 842, 2409
EciI	GGCGGA	1 cut(s)	96
Ecl136II	GAGCTC	4 cut(s)	277, 1857, 2632, 3298
Eco130I	CCWWGG	3 cut(s)	1668, 1850, 2826
Eco24I	GRGCYC	5 cut(s)	279, 1359, 1859, 2634, 3300
Eco47I	GGWCC	7 cut(s)	228, 822, 1012, 1303, 1873, 2033, 3261
Eco47III	AGCGCT	1 cut(s)	187
Eco53kI	GAGCTC	4 cut(s)	277, 1857, 2632, 3298
Eco57I	CTGAAG	2 cut(s)	2226, 2429
Eco88I	CYCGRG	2 cut(s)	70, 2683
Eco91I	GGTNACC	1 cut(s)	2881
EcoICRI	GAGCTC	4 cut(s)	277, 1857, 2632, 3298
EcoO109I	RGGNCCY	2 cut(s)	1873, 3261
EcoO65I	GGTNACC	1 cut(s)	2881
EcoRII	CCWGG	8 cut(s)	239, 575, 715, 1060, 1299, 1426, 2911, 3170
EcoT14I	CCWWGG	3 cut(s)	1668, 1850, 2826
EcoT22I	ATGCAT	1 cut(s)	2597
EcoT38I	GRGCYC	5 cut(s)	279, 1359, 1859, 2634, 3300
ErhI	CCWWGG	3 cut(s)	1668, 1850, 2826
FaqI	GGGAC	3 cut(s)	2098, 2512, 2700
FauI	CCCGC	1 cut(s)	2287
FbaI	TGATCA	1 cut(s)	1362
FblI	GTMKAC	2 cut(s)	298, 1731
Fnu4HI	GCNGC	9 cut(s)	67, 118, 160, 163, 184, 189, 2768, 2795, 2871
FriOI	GRGCYC	5 cut(s)	279, 1359, 1859, 2634, 3300
Fsp4HI	GCNGC	9 cut(s)	67, 118, 160, 163, 184, 189, 2768, 2795, 2871
FspI	TGCGCA	1 cut(s)	959
GlaI	GCGC	4 cut(s)	187, 959, 1739, 2754
GluI	GCNGC	9 cut(s)	67, 118, 160, 163, 184, 189, 2768, 2795, 2871
GsaI	CCCAGC	1 cut(s)	3192
GsuI	CTGGAG	2 cut(s)	2028, 2445
HaeII	RGCGCY	1 cut(s)	189
HapII	CCGG	9 cut(s)	92, 103, 203, 226, 252, 356, 375, 1870, 2798
HgaI	GACGC	3 cut(s)	233, 284, 753
HhaI	GCGC	4 cut(s)	188, 960, 1740, 2755
Hin1I	GRCGYC	3 cut(s)	244, 301, 327
Hin6I	GCGC	4 cut(s)	186, 958, 1738, 2753
HinP1I	GCGC	4 cut(s)	186, 958, 1738, 2753
HincII	GTYRAC	4 cut(s)	299, 858, 1732, 2572
HindII	GTYRAC	4 cut(s)	299, 858, 1732, 2572
HindIII	AAGCTT	3 cut(s)	389, 784, 1803
HpaI	GTTAAC	1 cut(s)	2572
HpaII	CCGG	9 cut(s)	92, 103, 203, 226, 252, 356, 375, 1870, 2798
Hpy166II	GTNNAC	7 cut(s)	299, 858, 1292, 1732, 1826, 2302, 2572
Hpy8I	GTNNAC	7 cut(s)	299, 858, 1292, 1732, 1826, 2302, 2572
HpyCH4III	ACNGT	9 cut(s)	109, 320, 532, 826, 862, 1168, 1381, 2000, 2698
HpyCH4IV	ACGT	7 cut(s)	301, 327, 468, 1538, 1734, 1794, 2404
HpyF10VI	GCNNNNNNNGC	5 cut(s)	156, 168, 590, 1854, 3116
HpySE526I	ACGT	7 cut(s)	301, 327, 468, 1538, 1734, 1794, 2404
Hsp92I	GRCGYC	3 cut(s)	244, 301, 327
HspAI	GCGC	4 cut(s)	186, 958, 1738, 2753
KpnI	GGTACC	1 cut(s)	513
Ksp22I	TGATCA	1 cut(s)	1362
KspAI	GTTAAC	1 cut(s)	2572
Lsp1109I	GCAGC	7 cut(s)	53, 129, 149, 171, 175, 195, 2857
LweI	GCATC	8 cut(s)	107, 461, 467, 675, 1827, 2182, 2582, 2925
MaeII	ACGT	7 cut(s)	301, 327, 468, 1538, 1734, 1794, 2404
MaeIII	GTNAC	8 cut(s)	152, 205, 1064, 1234, 2038, 2656, 2734, 2881
MbiI	CCGCTC	2 cut(s)	267, 344
MflI	RGATCY	5 cut(s)	51, 597, 730, 1088, 3233
MhlI	GDGCHC	8 cut(s)	279, 1337, 1359, 1859, 1964, 2634, 3136, 3300
MlsI	TGGCCA	1 cut(s)	3175
MluNI	TGGCCA	1 cut(s)	3175
MlyI	GAGTC	3 cut(s)	202, 2339, 2452
MmeI	TCCRAC	9 cut(s)	110, 259, 399, 800, 826, 895, 1122, 1187, 2322
Mox20I	TGGCCA	1 cut(s)	3175
Mph1103I	ATGCAT	1 cut(s)	2597
MscI	TGGCCA	1 cut(s)	3175
MseI	TTAA	8 cut(s)	312, 792, 1416, 2124, 2222, 2571, 2976, 3155
MslI	CAYNNNNRTG	5 cut(s)	938, 1797, 1940, 2675, 3254
Msp20I	TGGCCA	1 cut(s)	3175
MspA1I	CMGCKG	2 cut(s)	162, 708
MspI	CCGG	9 cut(s)	92, 103, 203, 226, 252, 356, 375, 1870, 2798
Mva1269I	GAATGC	1 cut(s)	2595
MvaI	CCWGG	8 cut(s)	241, 577, 717, 1062, 1301, 1428, 2913, 3172
MwoI	GCNNNNNNNGC	5 cut(s)	156, 168, 590, 1854, 3116
NciI	CCSGG	2 cut(s)	103, 1871
NcoI	CCATGG	1 cut(s)	1668
NlaIV	GGNNCC	3 cut(s)	340, 511, 1874
NmuCI	GTSAC	6 cut(s)	152, 205, 1064, 2656, 2734, 2881
NsbI	TGCGCA	1 cut(s)	959
NsiI	ATGCAT	1 cut(s)	2597
NspI	RCATGY	4 cut(s)	608, 1033, 1231, 2146
NspV	TTCGAA	1 cut(s)	3031
OliI	CACNNNNGTG	2 cut(s)	1797, 1940
PaeI	GCATGC	1 cut(s)	608
PagI	TCATGA	4 cut(s)	736, 1374, 1503, 3213
PaqCI	CACCTGC	1 cut(s)	3067
PcsI	WCGNNNNNNNCGW	1 cut(s)	822
PctI	GAATGC	1 cut(s)	2595
PfeI	GAWTC	7 cut(s)	359, 547, 711, 1650, 2813, 3245, 3278
PflMI	CCANNNNNTGG	1 cut(s)	893
PfoI	TCCNGGA	1 cut(s)	101
PinAI	ACCGGT	1 cut(s)	225
PkrI	GCNGC	9 cut(s)	68, 119, 161, 164, 185, 190, 2769, 2796, 2872
PleI	GAGTC	3 cut(s)	202, 2338, 2452
PpsI	GAGTC	3 cut(s)	202, 2338, 2452
PpuMI	RGGWCCY	2 cut(s)	1873, 3261
Psp124BI	GAGCTC	4 cut(s)	279, 1859, 2634, 3300
Psp5II	RGGWCCY	2 cut(s)	1873, 3261
Psp6I	CCWGG	8 cut(s)	239, 575, 715, 1060, 1299, 1426, 2911, 3170
PspEI	GGTNACC	1 cut(s)	2881
PspFI	CCCAGC	1 cut(s)	3188
PspGI	CCWGG	8 cut(s)	239, 575, 715, 1060, 1299, 1426, 2911, 3170
PspN4I	GGNNCC	3 cut(s)	340, 511, 1874
PspPPI	RGGWCCY	2 cut(s)	1873, 3261
PstI	CTGCAG	1 cut(s)	223
PsuI	RGATCY	5 cut(s)	51, 597, 730, 1088, 3233
PvuII	CAGCTG	1 cut(s)	162
RseI	CAYNNNNRTG	5 cut(s)	938, 1797, 1940, 2675, 3254
Rsr2I	CGGWCCG	1 cut(s)	228
RsrII	CGGWCCG	1 cut(s)	228
SacI	GAGCTC	4 cut(s)	279, 1859, 2634, 3300
SalI	GTCGAC	2 cut(s)	297, 1730
SaqAI	TTAA	8 cut(s)	312, 792, 1416, 2124, 2222, 2571, 2976, 3155
SatI	GCNGC	9 cut(s)	67, 118, 160, 163, 184, 189, 2768, 2795, 2871
ScaI	AGTACT	2 cut(s)	523, 3228
SchI	GAGTC	3 cut(s)	202, 2339, 2452
SduI	GDGCHC	8 cut(s)	279, 1337, 1359, 1859, 1964, 2634, 3136, 3300
SfaNI	GCATC	8 cut(s)	107, 461, 467, 675, 1827, 2182, 2582, 2925
SfcI	CTRYAG	3 cut(s)	219, 290, 1380
SfuI	TTCGAA	1 cut(s)	3031
SgrDI	CGTCGACG	1 cut(s)	297
SinI	GGWCC	7 cut(s)	228, 822, 1012, 1303, 1873, 2033, 3261
SmiMI	CAYNNNNRTG	5 cut(s)	938, 1797, 1940, 2675, 3254
SmlI	CTYRAG	3 cut(s)	1330, 2159, 2989
SmoI	CTYRAG	3 cut(s)	1330, 2159, 2989
SpeI	ACTAGT	3 cut(s)	518, 992, 2758
SphI	GCATGC	1 cut(s)	608
SspI	AATATT	4 cut(s)	613, 1687, 2049, 2226
SstI	GAGCTC	4 cut(s)	279, 1859, 2634, 3300
StyI	CCWWGG	3 cut(s)	1668, 1850, 2826
TaaI	ACNGT	9 cut(s)	109, 320, 532, 826, 862, 1168, 1381, 2000, 2698
TaiI	ACGT	7 cut(s)	304, 330, 471, 1541, 1737, 1797, 2407
TatI	WGTACW	7 cut(s)	521, 692, 1289, 1823, 2255, 2616, 3226
TauI	GCSGC	2 cut(s)	2770, 2797
TfiI	GAWTC	7 cut(s)	359, 547, 711, 1650, 2813, 3245, 3278
Tru1I	TTAA	8 cut(s)	312, 792, 1416, 2124, 2222, 2571, 2976, 3155
Tru9I	TTAA	8 cut(s)	312, 792, 1416, 2124, 2222, 2571, 2976, 3155
TscAI	CASTG	7 cut(s)	157, 325, 754, 2005, 2205, 2280, 2403
TseFI	GTSAC	6 cut(s)	152, 205, 1064, 2656, 2734, 2881
TseI	GCWGC	7 cut(s)	66, 117, 159, 162, 183, 188, 2870
Tsp45I	GTSAC	6 cut(s)	152, 205, 1064, 2656, 2734, 2881
TspGWI	ACGGA	5 cut(s)	100, 220, 259, 336, 1390
TspRI	CASTG	7 cut(s)	157, 325, 754, 2005, 2205, 2280, 2403
Van91I	CCANNNNNTGG	1 cut(s)	893
VpaK11BI	GGWCC	7 cut(s)	228, 822, 1012, 1303, 1873, 2033, 3261
XapI	RAATTY	4 cut(s)	33, 1157, 1496, 1918
XceI	RCATGY	4 cut(s)	608, 1033, 1231, 2146
XcmI	CCANNNNNNNNNTGG	2 cut(s)	894, 1897
XmiI	GTMKAC	2 cut(s)	298, 1731
ZraI	GACGTC	2 cut(s)	302, 328
ZrmI	AGTACT	2 cut(s)	523, 3228
Zsp2I	ATGCAT	1 cut(s)	2597

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.