Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010050.1

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

12560 .. 19022

Gene Structure 6463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010050.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3048 bp

atgtcaaaggacaatccaggtggagtcgatcataaggaccttgagtctcagcaaacagtgtcaaaagagcttgaactggtgcccattgatcctaaccgccgctggcgtacgattgtgctgatccttcaggcacgccatattttcgtcaccttagcagctgctaaaaatcctgaacttggatctcttacaggagacttggaagtaactataacccctaatcctacaccacctgaaggggttaccgccaatgtatattccgacaaccccaatgacagtgaatatcagctccagtttgccatcatttccaacatcataaagacaaaggatttaacatccttacgtgactttggaggtgcccaagcatttgcagaggctctcggtagtgatttggagactgggatccccaccaacgatgaagctacttgttgtcggctcaaatccaccacaaattccactactcctgaacaggctgctgcaagaggcttcattcagctagccaaaatatattgcaacagttacatgattctcttgcttttcgtggctgctgtgctctcactttgctttggaatcgtggaggaaggcccgacgactggttggtttgaaggggccatcatacttgatgccattatcatgctcgtggttcttccttccatacgtgattattggcgggagtctaaagggttgtccgggaggcaaaaactgttggagaacacagatgaagtggaggttgaggtcttaagaggcggaaatgaggagaagatctcctcatcagatattttgtttggtgacatcgtgtggttgaagagaggacatcaggttcctgctgatggtttattcatatcaggtggtttcgtagtcttggatgatcaattaggggcagtagttgatgccgataacccttttctcttctatggagcggaagtgatagatggcaatggtcgcatgcttgtgacatctgtgggtgtaaacacagtgtggggtgacatgatgagcagcataaaccatttgaagaagacaccattagaggcacaacttgacagggtgaacacttgtatgcagatcattggtctcctaatctctatcctgatccttgtggtgttgttcttgcgttttgaactcaaaaaagaactgcacaccggagcatccatggatctaaggggagagccaactaaaatgaacatgtttatggatgccatcaagaaaattgtcatgaaaccaagcggaaagattagtatcttgacaacttctcttacggtgatgctggttgggatagtagaagggttacctttctgtatcaaccttgccatcatttactggaacaggaaggctttgaatgggatggcctctcttcaacacctgttggcctgtgtcaccatggcttctgttacatctatctgcacagacaaaaacggtgggctaacattggattcaatggaagttgacatgtgctggattggcgaacaagttatggctgaaaattctgttatagcctcaaatgtcctcgaagcttttcgtgatggaatcagcatgctccttctctcgcagcctcctccttatacctcaatagaagaccctgtcatttcctgggcggctctgaagttgggcatggaattggaaattgtgaggcagagtaataccattgtcgaggataaagaattgaccactgatcaggaaggaagaggagcaatgatgcggaagaacagagacagtgaaagagaaagaatgtacttgcattgcagaggacctgctacaagtattttgcccatttgttcacactaccatgactgtgaagggaagatcaacgtcatcgaagaacgaaacagggtgacttttcatagaaatgtcgaggatatgcagtccaagcatcttaaaaccatggcatttgcgtacaaggaaattgatgtcccaacaatggaagaaagagatctgatattgctgggactggttggtctgaagtcatgtttggaaaagatgagggaatcaatcagagccataagaaacgctggagtcaatatcatactggtttccggagatgatgtgcagacactagtaagcatagctgagcatttcagaattcagggggtgccgatttcaaatgaaatggtgaccacaggtgaaaagttcaggaattgcagagaagaagacaggatgaagatggtaagtgaaatttcagtgatgggaaactcactcccctccgacaagcttcttctggttaagtgtttgaagcaaaaaggggaaacagtagcagtcattggagttaaaacgaatgaggctcctgcactgaaagaagctgatgttggacttacaatgggaatatggaccaccaaaatggctaaagcgagttcagacatcatcgtaagggttgcagatatcagttgcctggtaagtatcctcaggcatggaagatgtgcttattacaacattcaaaagtacatccaacttgagcttactatagtagccgcagggcttttagtaacatttatcatagcagcatctacaggaaatatgcccataacaagtatccaattgttctgggtaaatttggtagtgccaatgctgggcggcctggctcttttgacagagctcccaagaaagaagttaatggagaaatcacaatctggacaaaccaaagcaattattaccatggccatgtgcagaaatataataatccaagcttcatatcaagctgttattatagtcaccttccatttcaaaggacaagcaatcttgggtgttgatgaaaaggttcgcaagactatcatcttcaatagttttgtcatctgccagatttttaacaagttcagtgcgagagagctggtaaagaaaaatgtgtttaaggcgatccacaagaaccaatggttttgggtggctttggctgcaatcctagtgctacagctgagttttattgagatttcacatgtggttgctggcgatgcaaggctgagcttggtacactggggtttctgccttcttattgggattgtttcgctagggatggatatagctgcaaagggcatctatgattacatgtcatctttcgtcgagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1015

Amino Acids

112.18

Weight (kDa)

5.85

Isoelectric Point (pI)

33.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1947
Acc36I	ACCTGC	1 cut(s)	1753
AccB1I	GGYRCC	3 cut(s)	79, 353, 2083
AccBSI	CCGCTC	1 cut(s)	917
AccIII	TCCGGA	1 cut(s)	2027
AclWI	GGATC	8 cut(s)	83, 115, 187, 394, 407, 1081, 1158, 2836
AcoI	YGGCCR	1 cut(s)	2646
AcsI	RAATTY	5 cut(s)	448, 1477, 2073, 2166, 2539
AcuI	CTGAAG	4 cut(s)	110, 252, 1616, 1973
AdeI	CACNNNGTG	1 cut(s)	975
AfaI	GTAC	5 cut(s)	109, 1727, 1889, 2432, 2952
AfiI	CCNNNNNNNGG	6 cut(s)	176, 233, 590, 827, 1912, 2558
AflII	CTTAAG	1 cut(s)	736
AflIII	ACRYGT	4 cut(s)	1179, 1443, 2917, 3027
AhdI	GACNNNNNGTC	1 cut(s)	43
AhlI	ACTAGT	1 cut(s)	2047
AjnI	CCWGG	4 cut(s)	16, 1583, 2379, 2565
AjuI	GAANNNNNNNTTGG	4 cut(s)	1946, 1978, 2280, 2312
AloI	GAACNNNNNNTCC	2 cut(s)	801, 833
Alw21I	GWGCWC	2 cut(s)	552, 2586
Alw26I	GTCTC	5 cut(s)	51, 186, 386, 1073, 1698
AlwI	GGATC	8 cut(s)	83, 115, 187, 394, 407, 1081, 1158, 2836
Aor13HI	TCCGGA	1 cut(s)	2027
AoxI	GGCC	6 cut(s)	580, 606, 1341, 1362, 2563, 2646
ApoI	RAATTY	5 cut(s)	448, 1477, 2073, 2166, 2539
Asp700I	GAANNNNTTC	2 cut(s)	1509, 2745
AspS9I	GGNCC	5 cut(s)	37, 581, 606, 1742, 2319
AsuC2I	CCSGG	1 cut(s)	688
AsuNHI	GCTAGC	1 cut(s)	493
AvaII	GGWCC	3 cut(s)	37, 1742, 2319
AxyI	CCTNAGG	1 cut(s)	2393
BaeGI	GKGCMC	2 cut(s)	84, 358
BalI	TGGCCA	1 cut(s)	2648
BamHI	GGATCC	1 cut(s)	399
BanI	GGYRCC	3 cut(s)	79, 353, 2083
BanII	GRGCYC	1 cut(s)	2586
BauI	CACGAG	1 cut(s)	635
BbsI	GAAGAC	3 cut(s)	1019, 1575, 2148
Bbv12I	GWGCWC	2 cut(s)	552, 2586
BciT130I	CCWGG	4 cut(s)	18, 1585, 2381, 2567
BciVI	GTATCC	2 cut(s)	2399, 2531
BclI	TGATCA	2 cut(s)	865, 1666
BcnI	CCSGG	1 cut(s)	688
BcoDI	GTCTC	5 cut(s)	51, 186, 386, 1073, 1698
BcuI	ACTAGT	1 cut(s)	2047
BfaI	CTAG	4 cut(s)	494, 2048, 2885, 2990
BfmI	CTRYAG	3 cut(s)	2451, 2496, 2891
BfrI	CTTAAG	1 cut(s)	736
BfuAI	ACCTGC	1 cut(s)	1753
BfuI	GTATCC	2 cut(s)	2399, 2531
BglII	AGATCT	2 cut(s)	759, 1924
BlpI	GCTNAGC	2 cut(s)	2061, 2942
Bme1390I	CCNGG	5 cut(s)	18, 688, 1585, 2381, 2567
Bme18I	GGWCC	3 cut(s)	37, 1742, 2319
BmeRI	GACNNNNNGTC	1 cut(s)	43
BmgT120I	GGNCC	5 cut(s)	37, 581, 606, 1742, 2319
BmiI	GGNNCC	7 cut(s)	81, 355, 401, 607, 819, 2085, 2274
BmrFI	CCNGG	5 cut(s)	18, 688, 1585, 2381, 2567
BmrI	ACTGGG	2 cut(s)	405, 2965
BmtI	GCTAGC	1 cut(s)	497
BmuI	ACTGGG	2 cut(s)	405, 2965
BpiI	GAAGAC	3 cut(s)	1019, 1575, 2148
BplI	GAGNNNNNCTC	2 cut(s)	746, 778
BpmI	CTGGAG	2 cut(s)	272, 2025
Bpu10I	CCTNAGC	1 cut(s)	151
Bpu1102I	GCTNAGC	2 cut(s)	2061, 2942
BpuEI	CTTGAG	2 cut(s)	62, 2462
BpuMI	CCSGG	1 cut(s)	688
BsaAI	YACGTR	2 cut(s)	341, 656
BsaBI	GATNNNNATC	1 cut(s)	1232
BsaI	GGTCTC	1 cut(s)	1073
BsaJI	CCNNGG	5 cut(s)	1146, 1374, 1584, 1875, 2643
BsaWI	WCCGGW	2 cut(s)	1136, 2027
BsaXI	ACNNNNNCTCC	4 cut(s)	906, 936, 2022, 2052
Bsc4I	CCNNNNNNNGG	6 cut(s)	176, 233, 590, 827, 1912, 2558
Bse1I	ACTGG	8 cut(s)	81, 289, 400, 595, 1319, 1947, 2025, 2960
Bse21I	CCTNAGG	1 cut(s)	2393
Bse3DI	GCAATG	3 cut(s)	940, 1692, 1732
Bse8I	GATNNNNATC	1 cut(s)	1232
BseAI	TCCGGA	1 cut(s)	2027
BseBI	CCWGG	4 cut(s)	18, 1585, 2381, 2567
BseDI	CCNNGG	5 cut(s)	1146, 1374, 1584, 1875, 2643
BseGI	GGATG	8 cut(s)	332, 868, 1142, 1195, 1344, 2154, 2433, 3000
BseJI	GATNNNNATC	1 cut(s)	1232
BseLI	CCNNNNNNNGG	6 cut(s)	176, 233, 590, 827, 1912, 2558
BseMI	GCAATG	3 cut(s)	940, 1692, 1732
BseMII	CTCAG	5 cut(s)	62, 2052, 2407, 2888, 2933
BseNI	ACTGG	8 cut(s)	81, 289, 400, 595, 1319, 1947, 2025, 2960
BseRI	GAGGAG	4 cut(s)	754, 767, 1539, 1695
BseSI	GKGCMC	2 cut(s)	84, 358
BseYI	CCCAGC	2 cut(s)	1936, 2557
BsgI	GTGCAG	5 cut(s)	1115, 1381, 2060, 2262, 2674
BshFI	GGCC	6 cut(s)	582, 608, 1343, 1364, 2565, 2648
BshNI	GGYRCC	3 cut(s)	79, 353, 2083
BsiHKAI	GWGCWC	2 cut(s)	552, 2586
BsiSI	CCGG	3 cut(s)	687, 1137, 2028
BsiWI	CGTACG	1 cut(s)	107
BslFI	GGGAC	2 cut(s)	1889, 1953
BslI	CCNNNNNNNGG	6 cut(s)	176, 233, 590, 827, 1912, 2558
BsmAI	GTCTC	5 cut(s)	51, 186, 386, 1073, 1698
BsmFI	GGGAC	2 cut(s)	1889, 1953
BsnI	GGCC	6 cut(s)	582, 608, 1343, 1364, 2565, 2648
Bso31I	GGTCTC	1 cut(s)	1073
Bsp1286I	GDGCHC	4 cut(s)	84, 358, 552, 2586
Bsp13I	TCCGGA	1 cut(s)	2027
Bsp1720I	GCTNAGC	2 cut(s)	2061, 2942
Bsp19I	CCATGG	4 cut(s)	1146, 1374, 1875, 2643
BspANI	GGCC	6 cut(s)	582, 608, 1343, 1364, 2565, 2648
BspCNI	CTCAG	5 cut(s)	61, 2053, 2406, 2889, 2934
BspEI	TCCGGA	1 cut(s)	2027
BspHI	TCATGA	1 cut(s)	1209
BspLI	GGNNCC	7 cut(s)	81, 355, 401, 607, 819, 2085, 2274
BspMI	ACCTGC	1 cut(s)	1753
BspOI	GCTAGC	1 cut(s)	497
BspPI	GGATC	8 cut(s)	83, 115, 187, 394, 407, 1081, 1158, 2836
BspT107I	GGYRCC	3 cut(s)	79, 353, 2083
BspTI	CTTAAG	1 cut(s)	736
BspTNI	GGTCTC	1 cut(s)	1073
BsrBI	CCGCTC	1 cut(s)	917
BsrDI	GCAATG	3 cut(s)	940, 1692, 1732
BsrI	ACTGG	8 cut(s)	81, 289, 400, 595, 1319, 1947, 2025, 2960
BssECI	CCNNGG	5 cut(s)	1146, 1374, 1584, 1875, 2643
BssSI	CACGAG	1 cut(s)	635
BssT1I	CCWWGG	4 cut(s)	1146, 1374, 1875, 2643
Bst2BI	CACGAG	1 cut(s)	635
Bst2UI	CCWGG	4 cut(s)	18, 1585, 2381, 2567
Bst6I	CTCTTC	4 cut(s)	797, 911, 1353, 1672
BstAFI	CTTAAG	1 cut(s)	736
BstBAI	YACGTR	2 cut(s)	341, 656
BstC8I	GCNNGC	6 cut(s)	104, 133, 495, 944, 1529, 2929
BstDEI	CTNAG	7 cut(s)	48, 151, 1154, 2061, 2393, 2897, 2942
BstDSI	CCRYGG	4 cut(s)	1146, 1374, 1875, 2643
BstEII	GGTNACC	3 cut(s)	238, 1281, 2104
BstF5I	GGATG	8 cut(s)	332, 868, 1142, 1195, 1344, 2154, 2433, 3000
BstMAI	GTCTC	5 cut(s)	51, 186, 386, 1073, 1698
BstMWI	GCNNNNNNNGC	5 cut(s)	939, 1455, 1861, 2876, 2933
BstNI	CCWGG	4 cut(s)	18, 1585, 2381, 2567
BstNSI	RCATGY	6 cut(s)	946, 1183, 1447, 1531, 2921, 3031
BstPI	GGTNACC	3 cut(s)	238, 1281, 2104
BstSCI	CCNGG	5 cut(s)	16, 686, 1583, 2379, 2565
BstSFI	CTRYAG	3 cut(s)	2451, 2496, 2891
BstSLI	GKGCMC	2 cut(s)	84, 358
BstV2I	GAAGAC	3 cut(s)	1019, 1575, 2148
BstX2I	RGATCY	5 cut(s)	179, 399, 759, 1150, 1924
BstXI	CCANNNNNNTGG	1 cut(s)	2329
BstYI	RGATCY	5 cut(s)	179, 399, 759, 1150, 1924
Bsu36I	CCTNAGG	1 cut(s)	2393
BsuI	GTATCC	2 cut(s)	2399, 2531
BsuRI	GGCC	6 cut(s)	582, 608, 1343, 1364, 2565, 2648
BtgI	CCRYGG	4 cut(s)	1146, 1374, 1875, 2643
BtgZI	GCGATG	1 cut(s)	2946
BtsCI	GGATG	8 cut(s)	332, 868, 1142, 1195, 1344, 2154, 2433, 3000
BtsIMutI	CAGTG	9 cut(s)	63, 280, 978, 1662, 1714, 2178, 2279, 2809, 2953
BveI	ACCTGC	1 cut(s)	1753
Cac8I	GCNNGC	6 cut(s)	104, 133, 495, 944, 1529, 2929
CciI	TCATGA	1 cut(s)	1209
Cfr13I	GGNCC	5 cut(s)	37, 581, 606, 1742, 2319
Csp6I	GTAC	5 cut(s)	108, 1726, 1888, 2431, 2951
CspCI	CAANNNNNGTGG	3 cut(s)	36, 1393, 1428
CviQI	GTAC	5 cut(s)	108, 1726, 1888, 2431, 2951
DdeI	CTNAG	7 cut(s)	48, 151, 1154, 2061, 2393, 2897, 2942
DraIII	CACNNNGTG	1 cut(s)	975
DrdI	GACNNNNNNGTC	1 cut(s)	1947
DriI	GACNNNNNGTC	1 cut(s)	43
DseDI	GACNNNNNNGTC	1 cut(s)	1947
EaeI	YGGCCR	1 cut(s)	2646
Eam1104I	CTCTTC	4 cut(s)	797, 911, 1353, 1672
Eam1105I	GACNNNNNGTC	1 cut(s)	43
EarI	CTCTTC	4 cut(s)	797, 911, 1353, 1672
EciI	GGCGGA	1 cut(s)	759
Ecl136II	GAGCTC	1 cut(s)	2584
Eco130I	CCWWGG	4 cut(s)	1146, 1374, 1875, 2643
Eco24I	GRGCYC	1 cut(s)	2586
Eco31I	GGTCTC	1 cut(s)	1073
Eco32I	GATATC	1 cut(s)	2371
Eco47I	GGWCC	3 cut(s)	37, 1742, 2319
Eco53kI	GAGCTC	1 cut(s)	2584
Eco57I	CTGAAG	4 cut(s)	110, 252, 1616, 1973
Eco81I	CCTNAGG	1 cut(s)	2393
Eco91I	GGTNACC	3 cut(s)	238, 1281, 2104
EcoICRI	GAGCTC	1 cut(s)	2584
EcoO109I	RGGNCCY	2 cut(s)	37, 1742
EcoO65I	GGTNACC	3 cut(s)	238, 1281, 2104
EcoRI	GAATTC	1 cut(s)	2073
EcoRII	CCWGG	4 cut(s)	16, 1583, 2379, 2565
EcoRV	GATATC	1 cut(s)	2371
EcoT14I	CCWWGG	4 cut(s)	1146, 1374, 1875, 2643
EcoT38I	GRGCYC	1 cut(s)	2586
ErhI	CCWWGG	4 cut(s)	1146, 1374, 1875, 2643
FalI	AAGNNNNNCTT	2 cut(s)	2395, 2427
FaqI	GGGAC	2 cut(s)	1889, 1953
FauI	CCCGC	1 cut(s)	660
FbaI	TGATCA	2 cut(s)	865, 1666
FokI	GGATG	8 cut(s)	319, 875, 1129, 1202, 1351, 2161, 2420, 3007
FriOI	GRGCYC	1 cut(s)	2586
FspBI	CTAG	4 cut(s)	494, 2048, 2885, 2990
GsaI	CCCAGC	2 cut(s)	1940, 2561
GsuI	CTGGAG	2 cut(s)	272, 2025
HaeIII	GGCC	6 cut(s)	582, 608, 1343, 1364, 2565, 2648
HapII	CCGG	3 cut(s)	687, 1137, 2028
HincII	GTYRAC	1 cut(s)	1441
HindII	GTYRAC	1 cut(s)	1441
HindIII	AAGCTT	3 cut(s)	1506, 2201, 2673
HinfI	GANTC	9 cut(s)	24, 44, 523, 567, 671, 1427, 1521, 1979, 2007
HpaII	CCGG	3 cut(s)	687, 1137, 2028
Hpy166II	GTNNAC	5 cut(s)	967, 1045, 1441, 1772, 2953
Hpy188I	TCNGA	9 cut(s)	259, 772, 1596, 1929, 1953, 1988, 2072, 2197, 2347
Hpy8I	GTNNAC	5 cut(s)	967, 1045, 1441, 1772, 2953
Hpy99I	CGWCG	2 cut(s)	589, 3044
HpyCH4IV	ACGT	3 cut(s)	340, 655, 1803
HpyF10VI	GCNNNNNNNGC	5 cut(s)	939, 1455, 1861, 2876, 2933
HpyF3I	CTNAG	7 cut(s)	48, 151, 1154, 2061, 2393, 2897, 2942
HpySE526I	ACGT	3 cut(s)	340, 655, 1803
Kpn2I	TCCGGA	1 cut(s)	2027
Ksp22I	TGATCA	2 cut(s)	865, 1666
LmnI	GCTCC	7 cut(s)	291, 914, 1139, 1536, 1682, 2278, 2589
MaeI	CTAG	4 cut(s)	494, 2048, 2885, 2990
MaeII	ACGT	3 cut(s)	340, 655, 1803
MbiI	CCGCTC	1 cut(s)	917
MfeI	CAATTG	1 cut(s)	2525
MflI	RGATCY	5 cut(s)	179, 399, 759, 1150, 1924
MhlI	GDGCHC	4 cut(s)	84, 358, 552, 2586
MlsI	TGGCCA	1 cut(s)	2648
MluNI	TGGCCA	1 cut(s)	2648
MlyI	GAGTC	4 cut(s)	33, 53, 680, 2016
MmeI	TCCRAC	6 cut(s)	282, 330, 684, 2220, 2278, 2461
Mox20I	TGGCCA	1 cut(s)	2648
MroI	TCCGGA	1 cut(s)	2027
MroXI	GAANNNNTTC	2 cut(s)	1509, 2745
MscI	TGGCCA	1 cut(s)	2648
MseI	TTAA	8 cut(s)	329, 737, 1869, 2214, 2259, 2600, 2793, 2835
Msp20I	TGGCCA	1 cut(s)	2648
MspA1I	CMGCKG	3 cut(s)	102, 158, 2896
MspCI	CTTAAG	1 cut(s)	736
MspI	CCGG	3 cut(s)	687, 1137, 2028
MspR9I	CCNGG	5 cut(s)	18, 688, 1585, 2381, 2567
MunI	CAATTG	1 cut(s)	2525
MvaI	CCWGG	4 cut(s)	18, 1585, 2381, 2567
MwoI	GCNNNNNNNGC	5 cut(s)	939, 1455, 1861, 2876, 2933
NciI	CCSGG	1 cut(s)	688
NcoI	CCATGG	4 cut(s)	1146, 1374, 1875, 2643
NheI	GCTAGC	1 cut(s)	493
NlaIV	GGNNCC	7 cut(s)	81, 355, 401, 607, 819, 2085, 2274
NmuCI	GTSAC	9 cut(s)	145, 341, 785, 949, 980, 1369, 1825, 2104, 2698
NspI	RCATGY	6 cut(s)	946, 1183, 1447, 1531, 2921, 3031
PaeI	GCATGC	2 cut(s)	946, 1531
PagI	TCATGA	1 cut(s)	1209
PciI	ACATGT	4 cut(s)	1179, 1443, 2917, 3027
PdmI	GAANNNNTTC	2 cut(s)	1509, 2745
PfeI	GAWTC	5 cut(s)	523, 567, 1427, 1521, 1979
Pfl23II	CGTACG	1 cut(s)	107
PflFI	GACNNNGTC	1 cut(s)	1574
PfoI	TCCNGGA	1 cut(s)	686
PleI	GAGTC	4 cut(s)	32, 52, 679, 2015
PpsI	GAGTC	4 cut(s)	32, 52, 679, 2015
Ppu21I	YACGTR	2 cut(s)	341, 656
PpuMI	RGGWCCY	2 cut(s)	37, 1742
PscI	ACATGT	4 cut(s)	1179, 1443, 2917, 3027
Psp124BI	GAGCTC	1 cut(s)	2586
Psp5II	RGGWCCY	2 cut(s)	37, 1742
Psp6I	CCWGG	4 cut(s)	16, 1583, 2379, 2565
PspEI	GGTNACC	3 cut(s)	238, 1281, 2104
PspFI	CCCAGC	2 cut(s)	1936, 2557
PspGI	CCWGG	4 cut(s)	16, 1583, 2379, 2565
PspLI	CGTACG	1 cut(s)	107
PspN4I	GGNNCC	7 cut(s)	81, 355, 401, 607, 819, 2085, 2274
PspPI	GGNCC	5 cut(s)	37, 581, 606, 1742, 2319
PspPPI	RGGWCCY	2 cut(s)	37, 1742
PsuI	RGATCY	5 cut(s)	179, 399, 759, 1150, 1924
PsyI	GACNNNGTC	1 cut(s)	1574
PvuII	CAGCTG	2 cut(s)	158, 2896
RsaI	GTAC	5 cut(s)	109, 1727, 1889, 2432, 2952
RsaNI	GTAC	5 cut(s)	108, 1726, 1888, 2431, 2951
SacI	GAGCTC	1 cut(s)	2586
SaqAI	TTAA	8 cut(s)	329, 737, 1869, 2214, 2259, 2600, 2793, 2835
Sau96I	GGNCC	5 cut(s)	37, 581, 606, 1742, 2319
SchI	GAGTC	4 cut(s)	33, 53, 680, 2016
ScrFI	CCNGG	5 cut(s)	18, 688, 1585, 2381, 2567
SduI	GDGCHC	4 cut(s)	84, 358, 552, 2586
SfcI	CTRYAG	3 cut(s)	2451, 2496, 2891
SinI	GGWCC	3 cut(s)	37, 1742, 2319
SmlI	CTYRAG	3 cut(s)	41, 736, 2441
SmoI	CTYRAG	3 cut(s)	41, 736, 2441
SpeI	ACTAGT	1 cut(s)	2047
SphI	GCATGC	2 cut(s)	946, 1531
SspMI	CTAG	4 cut(s)	494, 2048, 2885, 2990
SstI	GAGCTC	1 cut(s)	2586
StyD4I	CCNGG	5 cut(s)	16, 686, 1583, 2379, 2565
StyI	CCWWGG	4 cut(s)	1146, 1374, 1875, 2643
TaiI	ACGT	3 cut(s)	343, 658, 1806
TaqI	TCGA	6 cut(s)	27, 1503, 1644, 1809, 1845, 3042
TatI	WGTACW	2 cut(s)	1725, 2430
TauI	GCSGC	4 cut(s)	102, 1592, 2462, 2565
TfiI	GAWTC	5 cut(s)	523, 567, 1427, 1521, 1979
Tru1I	TTAA	8 cut(s)	329, 737, 1869, 2214, 2259, 2600, 2793, 2835
Tru9I	TTAA	8 cut(s)	329, 737, 1869, 2214, 2259, 2600, 2793, 2835
TscAI	CASTG	9 cut(s)	63, 280, 978, 1669, 1714, 2178, 2286, 2809, 2960
TseFI	GTSAC	9 cut(s)	145, 341, 785, 949, 980, 1369, 1825, 2104, 2698
Tsp45I	GTSAC	9 cut(s)	145, 341, 785, 949, 980, 1369, 1825, 2104, 2698
TspRI	CASTG	9 cut(s)	63, 280, 978, 1669, 1714, 2178, 2286, 2809, 2960
Tth111I	GACNNNGTC	1 cut(s)	1574
Vha464I	CTTAAG	1 cut(s)	736
VpaK11BI	GGWCC	3 cut(s)	37, 1742, 2319
XapI	RAATTY	5 cut(s)	448, 1477, 2073, 2166, 2539
XceI	RCATGY	6 cut(s)	946, 1183, 1447, 1531, 2921, 3031
XmnI	GAANNNNTTC	2 cut(s)	1509, 2745
XspI	CTAG	4 cut(s)	494, 2048, 2885, 2990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.