Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

479114 .. 485507

Gene Structure 6394 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG007600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGGACATGTCAAAGGACAATCCAGGTGGAGTCGATCATAAGGACCTTGAGTCTCAGCAAACAGTGTCAAAAGAGCTTGAACTGGTGCCCATTGATCCTAACCGCCGCTGGCGTACGATAGTGCTGATCCTTCAGGCACGCCATATTTTCATCACCTTAGCAGCTGCTAAAAATCCTGAACTTGGATCTCTTACAGGAGACTTGGAAGTAACTATAACCCCTAATCCTACACCACCTGAAGGGGTTACCGCCAATGTATATTCCGACAACCCCAATGACAGTGAATATCAGCTCCAGTTTGCCACCATTTCCAACATCATAAAGACAAAGGATTTAACATCCTTACATGACTTTGGAGGTGCCCAAGCATTTGCAGAGGCTCTCGGTAGTGATTTGGAGACTGGGATCCCCACCAACGATGAAGCTACTTGTTGTCGGCTCAAATCCACCACAAATTCCACTACTCCTGAACAGGCTGCTGCAAGAGGCTTCATTCAGCTAGCCAAAATATATTGCAACAGTTACATGATTCTCTTGCTTTTTGTGGCTGCTGTGCTCTCACTTTGCTTTGGAATCGTGGAGGAAGGCCCGATGACTGGTTGGTTTGAAGGGGCCATCATACTTGATGCCATTATCATGCTCGTGGTTCTTCCTTCCATACGTGATTATTGGCGGGAGTCTAAAGGGTTGTCCGGGAGGCAAAAACTGTTGGAGAACACAGATGAAGTGGAGGTTGAGGTCTTAAGAGGCGGAAATGAGGAGAAGATCTCCTCATCAGATATTTTGTTTGGTGACATCGTGTGGTTGAAGAGAGGACATCAGATCATTGGTCTCCTAATCTCTATCCTGATCCTTGTGGTGTTGTTCTTGCGTTTTGAACTCAAAAAAGAACTGCACACCGGGGCATCCATGGATCTAAGGGGAGAGCCAACTAAAATGAACATGTTTATGGATGCCATCAAGAAAATTGTCATGAAACCAAGCGGAAAGATTAGTATCTTGACAACTTCTCTTACGGTGATGCTGGTTGGGATAGTAGAAGGGTTACCTTTCTGTATCAACCTTGCCATCATTTACTGGAACAGGAAGGCTTTGAATGGGATGGCCTCTCTTCAACATCTGTTGGCCTGTGTCACCATGGCTTCTGTTACATCTATCTGCACAGACAAAAACGGTGGGCTAACATTGGATTCAATGGAAGTTGACATGTGCTGGATTGGCGAACAAGTTATGGCTGAAAATTCTGTTATAGCCTCAAATGTCCTCGAAGCTTTTCGTGATGGAATCAGCATGCTCCTTCTCTCGCAGCCTCCTCCTTATACCTCAATAGAAGACCCTGTCATTTCCTGGGCGGCACTGAAGTTGGGCATGGAATTGGAAATTGTGAGGCAGAGTAATACCATTGTCGAGGATAAGGAATTGACCACTGATCAGGAAGGAAGAGGAGCAATGATGCGGAAGAACAGAGACAGTGAAAGAGAAAGAATGTACTTGCATTGCAGAGGACCTGCTACAAGTATTTTGCCCATTTGTTCACACTACCATGACTGTAAAGGGATGATCAACGTCATCGAAGAACGAAACAGGGTGACTTTTCATAGAAATGTCGAGGATATGCAGTCCAAGCATCTTAAAACCATGGCATTTGCGTACAAGGAAATTGATGTCCCAACAATGGAAGAAAGAGATCTGATATTGCTGGGACTGGTTGGTCTGAAGTCATGTTTGGAAAAGATGAGGGAATCAATCAGAGCCATAAGAAACGCTGGAGTCAATATCATACTGGTTTCCGGAGATGATGTGCAGACACTAGTGAGCATAGCTGAGCATTTCAGAATTCAGGGGGTGCCGATTTCAAATGAAATGGTGACCACAGGTGAAAAGTTCAGGAATTGCAGTGATGAAGACAGGATGAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

640

Amino Acids

71.16

Weight (kDa)

5.2

Isoelectric Point (pI)

35.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase	PF13246	452 - 573	8.8e-10	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1710
Acc36I	ACCTGC	1 cut(s)	1516
AccB1I	GGYRCC	3 cut(s)	85, 359, 1846
AccIII	TCCGGA	1 cut(s)	1790
AciI	CCGC	8 cut(s)	103, 106, 249, 673, 750, 984, 1352, 1456
AclWI	GGATC	7 cut(s)	89, 121, 193, 400, 413, 844, 921
AcsI	RAATTY	3 cut(s)	454, 1240, 1836
AcuI	CTGAAG	4 cut(s)	116, 258, 1379, 1736
AfaI	GTAC	3 cut(s)	115, 1490, 1652
AfiI	CCNNNNNNNGG	4 cut(s)	182, 239, 596, 1675
AflII	CTTAAG	1 cut(s)	742
AflIII	ACRYGT	3 cut(s)	6, 942, 1206
AgsI	TTSAA	8 cut(s)	80, 608, 808, 878, 1096, 1115, 1194, 1857
AhdI	GACNNNNNGTC	1 cut(s)	49
AhlI	ACTAGT	1 cut(s)	1810
AjnI	CCWGG	2 cut(s)	22, 1346
AjuI	GAANNNNNNNTTGG	2 cut(s)	1709, 1741
AluBI	AGCT	7 cut(s)	76, 164, 292, 425, 499, 1271, 1823
AluI	AGCT	7 cut(s)	76, 164, 292, 425, 499, 1271, 1823
Alw21I	GWGCWC	1 cut(s)	558
Alw26I	GTCTC	5 cut(s)	57, 192, 392, 836, 1461
AlwI	GGATC	7 cut(s)	89, 121, 193, 400, 413, 844, 921
Aor13HI	TCCGGA	1 cut(s)	1790
AoxI	GGCC	4 cut(s)	586, 612, 1104, 1125
ApeKI	GCWGC	6 cut(s)	161, 164, 476, 479, 548, 1306
ApoI	RAATTY	3 cut(s)	454, 1240, 1836
Asp700I	GAANNNNTTC	1 cut(s)	1272
AspS9I	GGNCC	4 cut(s)	43, 587, 612, 1505
AsuC2I	CCSGG	2 cut(s)	694, 901
AsuHPI	GGTGA	7 cut(s)	145, 803, 1030, 1126, 1600, 1879, 1889
AsuNHI	GCTAGC	1 cut(s)	499
AvaII	GGWCC	2 cut(s)	43, 1505
BaeGI	GKGCMC	2 cut(s)	90, 364
BamHI	GGATCC	1 cut(s)	405
BanI	GGYRCC	3 cut(s)	85, 359, 1846
BauI	CACGAG	1 cut(s)	641
BbsI	GAAGAC	2 cut(s)	1338, 1911
Bbv12I	GWGCWC	1 cut(s)	558
BbvI	GCAGC	6 cut(s)	151, 173, 463, 466, 535, 1318
BccI	CCATC	5 cut(s)	623, 965, 1076, 1096, 1274
BciT130I	CCWGG	2 cut(s)	24, 1348
BclI	TGATCA	2 cut(s)	1429, 1560
BcnI	CCSGG	2 cut(s)	694, 901
BcoDI	GTCTC	5 cut(s)	57, 192, 392, 836, 1461
BcuI	ACTAGT	1 cut(s)	1810
BfaI	CTAG	2 cut(s)	500, 1811
BfrI	CTTAAG	1 cut(s)	742
BfuAI	ACCTGC	1 cut(s)	1516
BglII	AGATCT	2 cut(s)	765, 1687
BisI	GCNGC	8 cut(s)	106, 162, 165, 477, 480, 549, 1307, 1353
BlpI	GCTNAGC	1 cut(s)	1824
BlsI	GCNGC	8 cut(s)	107, 163, 166, 478, 481, 550, 1308, 1354
Bme1390I	CCNGG	4 cut(s)	24, 694, 901, 1348
Bme18I	GGWCC	2 cut(s)	43, 1505
BmeRI	GACNNNNNGTC	1 cut(s)	49
BmgT120I	GGNCC	4 cut(s)	43, 587, 612, 1505
BmiI	GGNNCC	5 cut(s)	87, 361, 407, 613, 1848
BmrFI	CCNGG	4 cut(s)	24, 694, 901, 1348
BmrI	ACTGGG	1 cut(s)	411
BmsI	GCATC	6 cut(s)	616, 914, 943, 1011, 1443, 1636
BmtI	GCTAGC	1 cut(s)	503
BmuI	ACTGGG	1 cut(s)	411
BpiI	GAAGAC	2 cut(s)	1338, 1911
BplI	GAGNNNNNCTC	2 cut(s)	752, 784
BpmI	CTGGAG	2 cut(s)	278, 1788
Bpu10I	CCTNAGC	1 cut(s)	157
Bpu1102I	GCTNAGC	1 cut(s)	1824
BpuEI	CTTGAG	1 cut(s)	68
BpuMI	CCSGG	2 cut(s)	694, 901
BsaAI	YACGTR	1 cut(s)	662
BsaBI	GATNNNNATC	1 cut(s)	995
BsaI	GGTCTC	1 cut(s)	836
BsaJI	CCNNGG	5 cut(s)	900, 909, 1137, 1347, 1638
BsaWI	WCCGGW	1 cut(s)	1790
BsaXI	ACNNNNNCTCC	2 cut(s)	1785, 1815
Bsc4I	CCNNNNNNNGG	4 cut(s)	182, 239, 596, 1675
Bse1I	ACTGG	7 cut(s)	87, 295, 406, 601, 1082, 1710, 1788
Bse3DI	GCAATG	2 cut(s)	1455, 1495
Bse8I	GATNNNNATC	1 cut(s)	995
BseAI	TCCGGA	1 cut(s)	1790
BseBI	CCWGG	2 cut(s)	24, 1348
BseDI	CCNNGG	5 cut(s)	900, 909, 1137, 1347, 1638
BseGI	GGATG	6 cut(s)	338, 905, 958, 1107, 1563, 1917
BseJI	GATNNNNATC	1 cut(s)	995
BseLI	CCNNNNNNNGG	4 cut(s)	182, 239, 596, 1675
BseMI	GCAATG	2 cut(s)	1455, 1495
BseMII	CTCAG	2 cut(s)	68, 1815
BseNI	ACTGG	7 cut(s)	87, 295, 406, 601, 1082, 1710, 1788
BseRI	GAGGAG	4 cut(s)	760, 773, 1302, 1458
BseSI	GKGCMC	2 cut(s)	90, 364
BseXI	GCAGC	6 cut(s)	151, 173, 463, 466, 535, 1318
BseYI	CCCAGC	1 cut(s)	1699
BsgI	GTGCAG	3 cut(s)	878, 1144, 1823
BshFI	GGCC	4 cut(s)	588, 614, 1106, 1127
BshNI	GGYRCC	3 cut(s)	85, 359, 1846
BsiHKAI	GWGCWC	1 cut(s)	558
BsiSI	CCGG	3 cut(s)	693, 900, 1791
BsiWI	CGTACG	1 cut(s)	113
BslFI	GGGAC	2 cut(s)	1652, 1716
BslI	CCNNNNNNNGG	4 cut(s)	182, 239, 596, 1675
BsmAI	GTCTC	5 cut(s)	57, 192, 392, 836, 1461
BsmFI	GGGAC	2 cut(s)	1652, 1716
BsnI	GGCC	4 cut(s)	588, 614, 1106, 1127
Bso31I	GGTCTC	1 cut(s)	836
Bsp1286I	GDGCHC	3 cut(s)	90, 364, 558
Bsp13I	TCCGGA	1 cut(s)	1790
Bsp1720I	GCTNAGC	1 cut(s)	1824
Bsp19I	CCATGG	3 cut(s)	909, 1137, 1638
BspACI	CCGC	8 cut(s)	103, 106, 249, 673, 750, 984, 1352, 1456
BspANI	GGCC	4 cut(s)	588, 614, 1106, 1127
BspCNI	CTCAG	2 cut(s)	67, 1816
BspEI	TCCGGA	1 cut(s)	1790
BspHI	TCATGA	1 cut(s)	972
BspLI	GGNNCC	5 cut(s)	87, 361, 407, 613, 1848
BspMI	ACCTGC	1 cut(s)	1516
BspOI	GCTAGC	1 cut(s)	503
BspPI	GGATC	7 cut(s)	89, 121, 193, 400, 413, 844, 921
BspT107I	GGYRCC	3 cut(s)	85, 359, 1846
BspTI	CTTAAG	1 cut(s)	742
BspTNI	GGTCTC	1 cut(s)	836
BsrDI	GCAATG	2 cut(s)	1455, 1495
BsrI	ACTGG	7 cut(s)	87, 295, 406, 601, 1082, 1710, 1788
BssECI	CCNNGG	5 cut(s)	900, 909, 1137, 1347, 1638
BssSI	CACGAG	1 cut(s)	641
BssT1I	CCWWGG	3 cut(s)	909, 1137, 1638
Bst2BI	CACGAG	1 cut(s)	641
Bst2UI	CCWGG	2 cut(s)	24, 1348
Bst4CI	ACNGT	8 cut(s)	64, 281, 521, 708, 1018, 1175, 1472, 1550
Bst6I	CTCTTC	3 cut(s)	803, 1116, 1435
BstAFI	CTTAAG	1 cut(s)	742
BstBAI	YACGTR	1 cut(s)	662
BstC8I	GCNNGC	4 cut(s)	110, 139, 501, 1292
BstDEI	CTNAG	4 cut(s)	54, 157, 917, 1824
BstDSI	CCRYGG	3 cut(s)	909, 1137, 1638
BstEII	GGTNACC	3 cut(s)	244, 1044, 1867
BstF5I	GGATG	6 cut(s)	338, 905, 958, 1107, 1563, 1917
BstMAI	GTCTC	5 cut(s)	57, 192, 392, 836, 1461
BstMWI	GCNNNNNNNGC	2 cut(s)	1218, 1624
BstNI	CCWGG	2 cut(s)	24, 1348
BstNSI	RCATGY	4 cut(s)	10, 946, 1210, 1294
BstPI	GGTNACC	3 cut(s)	244, 1044, 1867
BstSCI	CCNGG	4 cut(s)	22, 692, 899, 1346
BstSLI	GKGCMC	2 cut(s)	90, 364
BstV1I	GCAGC	6 cut(s)	151, 173, 463, 466, 535, 1318
BstV2I	GAAGAC	2 cut(s)	1338, 1911
BstX2I	RGATCY	5 cut(s)	185, 405, 765, 913, 1687
BstYI	RGATCY	5 cut(s)	185, 405, 765, 913, 1687
BsuRI	GGCC	4 cut(s)	588, 614, 1106, 1127
BtgI	CCRYGG	3 cut(s)	909, 1137, 1638
BtsCI	GGATG	6 cut(s)	338, 905, 958, 1107, 1563, 1917
BtsI	GCAGTG	1 cut(s)	1903
BtsIMutI	CAGTG	6 cut(s)	69, 286, 1355, 1425, 1477, 1903
BveI	ACCTGC	1 cut(s)	1516
Cac8I	GCNNGC	4 cut(s)	110, 139, 501, 1292
CciI	TCATGA	1 cut(s)	972
Cfr13I	GGNCC	4 cut(s)	43, 587, 612, 1505
Csp6I	GTAC	3 cut(s)	114, 1489, 1651
CspCI	CAANNNNNGTGG	4 cut(s)	7, 42, 1156, 1191
CviQI	GTAC	3 cut(s)	114, 1489, 1651
DdeI	CTNAG	4 cut(s)	54, 157, 917, 1824
DrdI	GACNNNNNNGTC	1 cut(s)	1710
DriI	GACNNNNNGTC	1 cut(s)	49
DseDI	GACNNNNNNGTC	1 cut(s)	1710
Eam1104I	CTCTTC	3 cut(s)	803, 1116, 1435
Eam1105I	GACNNNNNGTC	1 cut(s)	49
EarI	CTCTTC	3 cut(s)	803, 1116, 1435
EciI	GGCGGA	1 cut(s)	765
Eco130I	CCWWGG	3 cut(s)	909, 1137, 1638
Eco31I	GGTCTC	1 cut(s)	836
Eco47I	GGWCC	2 cut(s)	43, 1505
Eco57I	CTGAAG	4 cut(s)	116, 258, 1379, 1736
Eco91I	GGTNACC	3 cut(s)	244, 1044, 1867
EcoO109I	RGGNCCY	2 cut(s)	43, 1505
EcoO65I	GGTNACC	3 cut(s)	244, 1044, 1867
EcoRI	GAATTC	1 cut(s)	1836
EcoRII	CCWGG	2 cut(s)	22, 1346
EcoT14I	CCWWGG	3 cut(s)	909, 1137, 1638
ErhI	CCWWGG	3 cut(s)	909, 1137, 1638
FaqI	GGGAC	2 cut(s)	1652, 1716
FauI	CCCGC	1 cut(s)	666
FbaI	TGATCA	2 cut(s)	1429, 1560
Fnu4HI	GCNGC	8 cut(s)	106, 162, 165, 477, 480, 549, 1307, 1353
FokI	GGATG	5 cut(s)	325, 892, 965, 1114, 1570
Fsp4HI	GCNGC	8 cut(s)	106, 162, 165, 477, 480, 549, 1307, 1353
FspBI	CTAG	2 cut(s)	500, 1811
GluI	GCNGC	8 cut(s)	106, 162, 165, 477, 480, 549, 1307, 1353
GsaI	CCCAGC	1 cut(s)	1703
GsuI	CTGGAG	2 cut(s)	278, 1788
HaeIII	GGCC	4 cut(s)	588, 614, 1106, 1127
HapII	CCGG	3 cut(s)	693, 900, 1791
HincII	GTYRAC	1 cut(s)	1204
HindII	GTYRAC	1 cut(s)	1204
HindIII	AAGCTT	1 cut(s)	1269
HinfI	GANTC	9 cut(s)	30, 50, 529, 573, 677, 1190, 1284, 1742, 1770
HpaII	CCGG	3 cut(s)	693, 900, 1791
HphI	GGTGA	7 cut(s)	145, 803, 1030, 1126, 1600, 1879, 1889
Hpy166II	GTNNAC	2 cut(s)	1204, 1535
Hpy188I	TCNGA	7 cut(s)	265, 778, 822, 1692, 1716, 1751, 1835
Hpy8I	GTNNAC	2 cut(s)	1204, 1535
HpyAV	CCTTC	9 cut(s)	140, 233, 578, 602, 663, 1034, 1081, 1307, 1430
HpyCH4III	ACNGT	8 cut(s)	64, 281, 521, 708, 1018, 1175, 1472, 1550
HpyCH4IV	ACGT	2 cut(s)	661, 1566
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1218, 1624
HpyF3I	CTNAG	4 cut(s)	54, 157, 917, 1824
HpySE526I	ACGT	2 cut(s)	661, 1566
Kpn2I	TCCGGA	1 cut(s)	1790
Ksp22I	TGATCA	2 cut(s)	1429, 1560
LmnI	GCTCC	3 cut(s)	297, 1299, 1445
Lsp1109I	GCAGC	6 cut(s)	151, 173, 463, 466, 535, 1318
LweI	GCATC	6 cut(s)	616, 914, 943, 1011, 1443, 1636
MaeI	CTAG	2 cut(s)	500, 1811
MaeII	ACGT	2 cut(s)	661, 1566
MaeIII	GTNAC	9 cut(s)	208, 244, 521, 791, 1044, 1132, 1147, 1588, 1867
MflI	RGATCY	5 cut(s)	185, 405, 765, 913, 1687
MhlI	GDGCHC	3 cut(s)	90, 364, 558
MluCI	AATT	9 cut(s)	454, 966, 1240, 1373, 1380, 1418, 1659, 1836, 1891
MlyI	GAGTC	4 cut(s)	39, 59, 686, 1779
MmeI	TCCRAC	3 cut(s)	288, 336, 690
MroI	TCCGGA	1 cut(s)	1790
MroXI	GAANNNNTTC	1 cut(s)	1272
MseI	TTAA	3 cut(s)	335, 743, 1632
MslI	CAYNNNNRTG	5 cut(s)	635, 641, 947, 1542, 1602
MspA1I	CMGCKG	2 cut(s)	108, 164
MspCI	CTTAAG	1 cut(s)	742
MspI	CCGG	3 cut(s)	693, 900, 1791
MspR9I	CCNGG	4 cut(s)	24, 694, 901, 1348
MvaI	CCWGG	2 cut(s)	24, 1348
MwoI	GCNNNNNNNGC	2 cut(s)	1218, 1624
NciI	CCSGG	2 cut(s)	694, 901
NcoI	CCATGG	3 cut(s)	909, 1137, 1638
NheI	GCTAGC	1 cut(s)	499
NlaIV	GGNNCC	5 cut(s)	87, 361, 407, 613, 1848
NmuCI	GTSAC	4 cut(s)	791, 1132, 1588, 1867
NspI	RCATGY	4 cut(s)	10, 946, 1210, 1294
PaeI	GCATGC	1 cut(s)	1294
PagI	TCATGA	1 cut(s)	972
PciI	ACATGT	3 cut(s)	6, 942, 1206
PdmI	GAANNNNTTC	1 cut(s)	1272
PfeI	GAWTC	5 cut(s)	529, 573, 1190, 1284, 1742
Pfl23II	CGTACG	1 cut(s)	113
PflFI	GACNNNGTC	1 cut(s)	1337
PfoI	TCCNGGA	1 cut(s)	692
PkrI	GCNGC	8 cut(s)	107, 163, 166, 478, 481, 550, 1308, 1354
PleI	GAGTC	4 cut(s)	38, 58, 685, 1778
PpsI	GAGTC	4 cut(s)	38, 58, 685, 1778
Ppu21I	YACGTR	1 cut(s)	662
PpuMI	RGGWCCY	2 cut(s)	43, 1505
PscI	ACATGT	3 cut(s)	6, 942, 1206
Psp5II	RGGWCCY	2 cut(s)	43, 1505
Psp6I	CCWGG	2 cut(s)	22, 1346
PspEI	GGTNACC	3 cut(s)	244, 1044, 1867
PspFI	CCCAGC	1 cut(s)	1699
PspGI	CCWGG	2 cut(s)	22, 1346
PspLI	CGTACG	1 cut(s)	113
PspN4I	GGNNCC	5 cut(s)	87, 361, 407, 613, 1848
PspPI	GGNCC	4 cut(s)	43, 587, 612, 1505
PspPPI	RGGWCCY	2 cut(s)	43, 1505
PsuI	RGATCY	5 cut(s)	185, 405, 765, 913, 1687
PsyI	GACNNNGTC	1 cut(s)	1337
PvuII	CAGCTG	1 cut(s)	164
RsaI	GTAC	3 cut(s)	115, 1490, 1652
RsaNI	GTAC	3 cut(s)	114, 1489, 1651
RseI	CAYNNNNRTG	5 cut(s)	635, 641, 947, 1542, 1602
SaqAI	TTAA	3 cut(s)	335, 743, 1632
SatI	GCNGC	8 cut(s)	106, 162, 165, 477, 480, 549, 1307, 1353
Sau96I	GGNCC	4 cut(s)	43, 587, 612, 1505
SchI	GAGTC	4 cut(s)	39, 59, 686, 1779
ScrFI	CCNGG	4 cut(s)	24, 694, 901, 1348
SduI	GDGCHC	3 cut(s)	90, 364, 558
SfaNI	GCATC	6 cut(s)	616, 914, 943, 1011, 1443, 1636
SinI	GGWCC	2 cut(s)	43, 1505
SmiMI	CAYNNNNRTG	5 cut(s)	635, 641, 947, 1542, 1602
SmlI	CTYRAG	2 cut(s)	47, 742
SmoI	CTYRAG	2 cut(s)	47, 742
SpeI	ACTAGT	1 cut(s)	1810
SphI	GCATGC	1 cut(s)	1294
Sse9I	AATT	9 cut(s)	454, 966, 1240, 1373, 1380, 1418, 1659, 1836, 1891
SsiI	CCGC	8 cut(s)	103, 106, 249, 673, 750, 984, 1352, 1456
SspMI	CTAG	2 cut(s)	500, 1811
StyD4I	CCNGG	4 cut(s)	22, 692, 899, 1346
StyI	CCWWGG	3 cut(s)	909, 1137, 1638
TaaI	ACNGT	8 cut(s)	64, 281, 521, 708, 1018, 1175, 1472, 1550
TaiI	ACGT	2 cut(s)	664, 1569
TaqI	TCGA	5 cut(s)	33, 1266, 1407, 1572, 1608
TasI	AATT	9 cut(s)	454, 966, 1240, 1373, 1380, 1418, 1659, 1836, 1891
TatI	WGTACW	1 cut(s)	1488
TauI	GCSGC	2 cut(s)	108, 1355
TfiI	GAWTC	5 cut(s)	529, 573, 1190, 1284, 1742
Tru1I	TTAA	3 cut(s)	335, 743, 1632
Tru9I	TTAA	3 cut(s)	335, 743, 1632
TscAI	CASTG	6 cut(s)	69, 286, 1362, 1432, 1477, 1903
TseFI	GTSAC	4 cut(s)	791, 1132, 1588, 1867
TseI	GCWGC	6 cut(s)	161, 164, 476, 479, 548, 1306
Tsp45I	GTSAC	4 cut(s)	791, 1132, 1588, 1867
TspDTI	ATGAA	9 cut(s)	139, 435, 481, 738, 953, 989, 1586, 1875, 1917
TspRI	CASTG	6 cut(s)	69, 286, 1362, 1432, 1477, 1903
Tth111I	GACNNNGTC	1 cut(s)	1337
Vha464I	CTTAAG	1 cut(s)	742
VpaK11BI	GGWCC	2 cut(s)	43, 1505
XapI	RAATTY	3 cut(s)	454, 1240, 1836
XceI	RCATGY	4 cut(s)	10, 946, 1210, 1294
XmnI	GAANNNNTTC	1 cut(s)	1272
XspI	CTAG	2 cut(s)	500, 1811

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.