Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

506712 .. 512301

Gene Structure 5590 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000030902

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3054 bp

ATGGACATGTCAAAGGACAATCCAGGTGGAGTTGATCAGAAGGACCTTGAGTCTCAGCAAACACTGTCAAAAGAGCTTGAACTGGTGCCCATTGATCCTAATCGCCGCTGGCGCACGATTGTGCTGATCCTTCAGGCACGCCATATCTTCATCACCTTAGCAGCTGCTAAAAACCCTAAACTTGGATCTCTCACAGGGGACTTGGAAGTAACTATAACCCCTAATCCCACACCACCTGAAGGGGTTACCGTCAATGTAAATTCCGACAACCCCAATGACAGTGAATATCAGCTCCAGTTTGCCACCATTTCCAACATCATAAAGACAAAGGATGTTAAATCCTTACGTGACTTTGGAGGTGCCAAAGCATTTTCAGAGGCTCTCGGAAGTGATTTGGAGACTGGGATCCCCACCAACGATGAAGCCACTTGTTGTCGGCTCAGATGCACCACATATTCCACTACTTCTGGACAGGCTGCTCCAAGAGGCTTCATTCAGCTAGCCAAAAAAAATTGCAACAGTTACATGATTCTCTTGCTTTTCGTGGCTGCTGTGCTCTCACTTTGCTTTGGAATCGTGGAGGAAGGCCCGACGACTGGTTGGTTTGAAGGGGTCATCATATTTGATGCCATTATCATACTCGTGGTTCTTCCTTCCATACGTGATTATTGGCGTGAATCTAAAGGGTTGTCAGGGACGTTAAAACTGTTGGAGAACAGAGATCAAGGGGAGGTTGAGGTCTTACGAGGCGGAAATGAGGAGAAGATCTCCTCATCAGATATTACGTGTGGTGACATCGTGTGCTTGAAGAGAGGACAGCAGGTTCCTGCTGATGGTTTATTCATATCAGGTGGTTTCATAGTCTCGGATGATGAGTTAGGGTCCGTGGTAGTTGATACCAATAACCCTTTTCTCTTCTATGGAGCGGAAGTGATAAATGGCAATGGTCGAATGCTTGTGACATCTGAGGGTGTAAATAACACAGTGTGGGGTGACATGATGCGCAGCATAAACCATTTGAAGACACCATTAGAAGCTCAACTTGACAGGGTGAACACTTGTATACAGATCATTGGTCTCCTAATCTCTATCCTGATCCTTGTGGTGTTGTTCTTACGTTTTGAACTCAAAAAAGAACAGCACACCGGAGGCTCCATGGATCTAAAGGGAGAGCCAACTAAGATGAACATGTTTATGGATGCCATCAAGAAAATTGTCATGAAACCAAGCGGAAAGATTAGTATCTTGACAACTTCTCTCACAATGACGCTGGTTGGGATAGTAGAAGGGTTCCCTTTCTGTATCAACCTAGCCATAATTTACTGGAACAGGAAAGCTTTGAATGGGATGGCCTCCCTTCAATACCAGTTGGCTTGTGTCAACATGGCTTCTGTTACATCTATCTGCACAGACAAAAACGGTGGGCTAACATTGGATTCAATGGAAGTTGACATGTGCTGGATTGGCGAACAAGTTATGGCTGAAAATTCTGTTATAGCCCCACATGTCCTCGAAGCTCTTCGTGATGGAATCAGCATGCTCCTTCTCTCGCAGCCTCCTTGTACCTCAATAGAAGACCCTGTCATTTCCTGGGCGGCACTGACGTTGGGCATGGAATTGGAAATTGTGAGGCAGAGTAATACCATTGTCGAGGACAAAGAATTGGCCACTGATCAGGAAGGAAGAGGAGCAATGATGCGGAAGAACAGAGGTGGTGAAAGAGAAACAATGTACTTGCATTGCAGAGGACCTGCTACAAGTATTTTGCCCATTTGTTCACGCTACCATGACTGTGAAGGGATGATAAAAGTCATCGAAGAACGGAACAGGGTGACTTTTCAGAGAAATGTCGAGGATATGCAGTCCAAGCATCTCAAAACCATGGCCTTTGCGTACAAGGAAATTGATGTCCCAACAATGGTAGAAGAAGATCTAATATTGCTGGGACTGGTTGGTCTGAAGCCAAGTTCGGAAAAGATGAGGGAATCAATCAGAGCCATAAGAAACGCTGGAGTCAATATCATACTGGTTTCCGGAGATAATGTGCAGACACTAGTGAGCATAGCTGAGCATTTCGGAATTCTGGGGGTGCCGAATTCAAATGAGAAGGTGACCACAGGTGAAAAGTTCAGGAATTGCAGTGATATAGAGAGGATGAAGATGGTAAGTGAAATTTCAGTGATGGGAAACTCACTCCCCTCCGACAAGCTTCTTCTGGTTAGGTGTTTGAAGCAAAAAGGGGAAACAGTAGCAGTCATTGGAGTTAAAACGAATGAGGCTCCTGCACTGAAAGAAGCTGATGTTGGACTTGCAATGGGAATATGGACTACCAAAATGACTAAAGCGAGTTCAGACATCATCGTAAGGGTTGCAGATATCAGTTGCCTGGTAAGTATCCTCAGGTATGGGAGATGTGCTTATTACAACATTCAAAAGTACATCCAACTTGAGCTTACTATAGTCGCCTCAGGGCTTTTAGTAACAGTTATCATAGCAGCATCTACAGGAAATATGCCCATAACAAGTATCCAATTGTTCTGGGTAAACCTGGTAGTGCCAATGCTGGGCGGCCTGGCTCTATTGACAGAGCTCCCAAGAAAGAAGTTAATGGAGAAATCACAATCTGGACAAACCAAAGCAATTATTACCATGGCCATGTGCAGAAATATAATAATCCAAGCTTCATATCAAGCTGTTACTATAGTCACCTTCCATTTCAAAGGACAAGCAATCTTGGGTGTCGATGAAAAGTTTCGTAAGACTATCATCTTCAATAGTTTTGTCATCTGCCAGATTTTTAACAAGTTCAGTGCAAGAGAGCTGGTAAAGAAAAATGTTTTTAAGGCGATCCACAAAAACCAATGGTTTTGGGTGGCTTTGGCTGCAATACTAGTGCTACAGCTGAGTTTTATTGAGATTTCACATGTGGTTGCTGGTGATGCAAGGCTGACCTTGGTGCACTGGGGTTTCTGCCTTCTTATTGGGATTGTTTCTCTAGGGATGGATATAGCTGCAAAGTGCATATATGATTACATGTCATCTTTCGTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1018

Amino Acids

112.03

Weight (kDa)

6.08

Isoelectric Point (pI)

32.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	242 - 328	9.2e-09	P-type ATPase actuator domain
Cation_ATPase	PF13246	533 - 654	9.6e-09	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	624 - 767	7e-08	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	838 - 1006	5e-32	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1953
Acc16I	TGCGCA	1 cut(s)	1004
Acc36I	ACCTGC	2 cut(s)	811, 1759
AccB1I	GGYRCC	3 cut(s)	85, 359, 2089
AccBSI	CCGCTC	1 cut(s)	926
AccI	GTMKAC	1 cut(s)	1063
AccIII	TCCGGA	1 cut(s)	2033
AciI	CCGC	7 cut(s)	106, 750, 926, 1230, 1595, 1699, 2568
AclWI	GGATC	8 cut(s)	89, 121, 193, 400, 413, 1090, 1167, 2842
AcoI	YGGCCR	2 cut(s)	1665, 2652
AcsI	RAATTY	5 cut(s)	259, 1486, 2079, 2095, 2172
AcuI	CTGAAG	3 cut(s)	116, 258, 1979
AdeI	CACNNNGTG	1 cut(s)	987
AfaI	GTAC	4 cut(s)	1564, 1733, 1895, 2438
AfiI	CCNNNNNNNGG	6 cut(s)	182, 239, 596, 833, 1918, 2564
AflIII	ACRYGT	7 cut(s)	6, 785, 1188, 1452, 1504, 2923, 3033
AhdI	GACNNNNNGTC	1 cut(s)	49
AhlI	ACTAGT	2 cut(s)	2053, 2890
AjnI	CCWGG	5 cut(s)	22, 1589, 2385, 2547, 2571
AjuI	GAANNNNNNNTTGG	2 cut(s)	2286, 2318
AleI	CACNNNNGTG	1 cut(s)	119
AloI	GAACNNNNNNTCC	2 cut(s)	807, 839
Alw21I	GWGCWC	3 cut(s)	558, 2592, 2961
Alw26I	GTCTC	4 cut(s)	57, 392, 868, 1082
Alw44I	GTGCAC	1 cut(s)	2957
AlwI	GGATC	8 cut(s)	89, 121, 193, 400, 413, 1090, 1167, 2842
Aor13HI	TCCGGA	1 cut(s)	2033
AoxI	GGCC	6 cut(s)	586, 1350, 1665, 1884, 2569, 2652
ApaLI	GTGCAC	1 cut(s)	2957
ApeKI	GCWGC	9 cut(s)	161, 164, 476, 548, 1005, 1552, 2495, 2882, 3011
ApoI	RAATTY	5 cut(s)	259, 1486, 2079, 2095, 2172
Asp700I	GAANNNNTTC	2 cut(s)	1518, 2751
AspLEI	GCGC	2 cut(s)	114, 1005
AspS9I	GGNCC	4 cut(s)	43, 587, 882, 1748
AsuNHI	GCTAGC	1 cut(s)	499
AvaII	GGWCC	3 cut(s)	43, 882, 1748
AxyI	CCTNAGG	2 cut(s)	2399, 2467
BaeGI	GKGCMC	2 cut(s)	90, 2961
BalI	TGGCCA	2 cut(s)	1667, 2654
BamHI	GGATCC	1 cut(s)	405
BanI	GGYRCC	3 cut(s)	85, 359, 2089
BanII	GRGCYC	1 cut(s)	2592
BauI	CACGAG	1 cut(s)	641
BbsI	GAAGAC	2 cut(s)	1028, 1581
Bbv12I	GWGCWC	3 cut(s)	558, 2592, 2961
BbvI	GCAGC	9 cut(s)	151, 173, 463, 535, 1017, 1564, 2507, 2869, 2998
BccI	CCATC	7 cut(s)	827, 1211, 1342, 1520, 2155, 2176, 2995
BciT130I	CCWGG	5 cut(s)	24, 1591, 2387, 2549, 2573
BciVI	GTATCC	2 cut(s)	2405, 2537
BclI	TGATCA	2 cut(s)	34, 1672
BcoDI	GTCTC	4 cut(s)	57, 392, 868, 1082
BcuI	ACTAGT	2 cut(s)	2053, 2890
BfaI	CTAG	5 cut(s)	500, 1310, 2054, 2891, 2996
BfmI	CTRYAG	4 cut(s)	2457, 2502, 2700, 2897
BfuAI	ACCTGC	2 cut(s)	811, 1759
BfuI	GTATCC	2 cut(s)	2405, 2537
BglII	AGATCT	2 cut(s)	765, 1930
BlpI	GCTNAGC	1 cut(s)	2067
Bme1390I	CCNGG	5 cut(s)	24, 1591, 2387, 2549, 2573
Bme18I	GGWCC	3 cut(s)	43, 882, 1748
BmeRI	GACNNNNNGTC	1 cut(s)	49
BmgT120I	GGNCC	4 cut(s)	43, 587, 882, 1748
BmiI	GGNNCC	9 cut(s)	87, 361, 407, 825, 883, 1153, 1292, 2091, 2280
BmrFI	CCNGG	5 cut(s)	24, 1591, 2387, 2549, 2573
BmrI	ACTGGG	2 cut(s)	411, 2971
BmsI	GCATC	8 cut(s)	434, 616, 990, 1189, 1686, 1879, 2507, 2929
BmtI	GCTAGC	1 cut(s)	503
BmuI	ACTGGG	2 cut(s)	411, 2971
BpiI	GAAGAC	2 cut(s)	1028, 1581
BplI	GAGNNNNNCTC	2 cut(s)	752, 784
BpmI	CTGGAG	2 cut(s)	278, 2031
Bpu10I	CCTNAGC	1 cut(s)	157
Bpu1102I	GCTNAGC	1 cut(s)	2067
BpuEI	CTTGAG	2 cut(s)	68, 2468
BsaAI	YACGTR	3 cut(s)	347, 662, 786
BsaBI	GATNNNNATC	2 cut(s)	99, 1241
BsaI	GGTCTC	1 cut(s)	1082
BsaJI	CCNNGG	6 cut(s)	885, 1155, 1590, 1881, 2649, 2952
BsaWI	WCCGGW	2 cut(s)	1145, 2033
BsaXI	ACNNNNNCTCC	4 cut(s)	915, 945, 2028, 2058
Bsc4I	CCNNNNNNNGG	6 cut(s)	182, 239, 596, 833, 1918, 2564
Bse1I	ACTGG	9 cut(s)	87, 295, 406, 601, 1328, 1366, 1953, 2031, 2966
Bse21I	CCTNAGG	2 cut(s)	2399, 2467
Bse3DI	GCAATG	4 cut(s)	949, 1698, 1738, 2319
Bse8I	GATNNNNATC	2 cut(s)	99, 1241
BseAI	TCCGGA	1 cut(s)	2033
BseBI	CCWGG	5 cut(s)	24, 1591, 2387, 2549, 2573
BseDI	CCNNGG	6 cut(s)	885, 1155, 1590, 1881, 2649, 2952
BseGI	GGATG	8 cut(s)	337, 874, 1204, 1353, 1806, 2160, 2439, 3006
BseJI	GATNNNNATC	2 cut(s)	99, 1241
BseLI	CCNNNNNNNGG	6 cut(s)	182, 239, 596, 833, 1918, 2564
BseMI	GCAATG	4 cut(s)	949, 1698, 1738, 2319
BseMII	CTCAG	7 cut(s)	68, 454, 957, 2058, 2413, 2481, 2894
BseNI	ACTGG	9 cut(s)	87, 295, 406, 601, 1328, 1366, 1953, 2031, 2966
BseRI	GAGGAG	3 cut(s)	760, 773, 1701
BseSI	GKGCMC	2 cut(s)	90, 2961
BseXI	GCAGC	9 cut(s)	151, 173, 463, 535, 1017, 1564, 2507, 2869, 2998
BseYI	CCCAGC	2 cut(s)	1942, 2563
BsgI	GTGCAG	4 cut(s)	1390, 2066, 2268, 2680
BshFI	GGCC	6 cut(s)	588, 1352, 1667, 1886, 2571, 2654
BshNI	GGYRCC	3 cut(s)	85, 359, 2089
BsiHKAI	GWGCWC	3 cut(s)	558, 2592, 2961
BsiSI	CCGG	2 cut(s)	1146, 2034
BslFI	GGGAC	4 cut(s)	212, 709, 1895, 1959
BslI	CCNNNNNNNGG	6 cut(s)	182, 239, 596, 833, 1918, 2564
BsmAI	GTCTC	4 cut(s)	57, 392, 868, 1082
BsmFI	GGGAC	4 cut(s)	212, 709, 1895, 1959
BsmI	GAATGC	1 cut(s)	957
BsnI	GGCC	6 cut(s)	588, 1352, 1667, 1886, 2571, 2654
Bso31I	GGTCTC	1 cut(s)	1082
Bsp1286I	GDGCHC	4 cut(s)	90, 558, 2592, 2961
Bsp13I	TCCGGA	1 cut(s)	2033
Bsp1720I	GCTNAGC	1 cut(s)	2067
Bsp19I	CCATGG	3 cut(s)	1155, 1881, 2649
BspACI	CCGC	7 cut(s)	106, 750, 926, 1230, 1595, 1699, 2568
BspANI	GGCC	6 cut(s)	588, 1352, 1667, 1886, 2571, 2654
BspCNI	CTCAG	7 cut(s)	67, 453, 958, 2059, 2412, 2480, 2895
BspEI	TCCGGA	1 cut(s)	2033
BspHI	TCATGA	1 cut(s)	1218
BspLI	GGNNCC	9 cut(s)	87, 361, 407, 825, 883, 1153, 1292, 2091, 2280
BspMI	ACCTGC	2 cut(s)	811, 1759
BspOI	GCTAGC	1 cut(s)	503
BspPI	GGATC	8 cut(s)	89, 121, 193, 400, 413, 1090, 1167, 2842
BspQI	GCTCTTC	1 cut(s)	1524
BspT107I	GGYRCC	3 cut(s)	85, 359, 2089
BspTNI	GGTCTC	1 cut(s)	1082
BsrBI	CCGCTC	1 cut(s)	926
BsrDI	GCAATG	4 cut(s)	949, 1698, 1738, 2319
BsrI	ACTGG	9 cut(s)	87, 295, 406, 601, 1328, 1366, 1953, 2031, 2966
BssECI	CCNNGG	6 cut(s)	885, 1155, 1590, 1881, 2649, 2952
BssNAI	GTATAC	1 cut(s)	1064
BssSI	CACGAG	1 cut(s)	641
BssT1I	CCWWGG	4 cut(s)	1155, 1881, 2649, 2952
Bst1107I	GTATAC	1 cut(s)	1064
Bst2BI	CACGAG	1 cut(s)	641
Bst2UI	CCWGG	5 cut(s)	24, 1591, 2387, 2549, 2573
Bst6I	CTCTTC	4 cut(s)	803, 920, 1524, 1678
BstBAI	YACGTR	3 cut(s)	347, 662, 786
BstC8I	GCNNGC	4 cut(s)	110, 139, 501, 1538
BstDEI	CTNAG	9 cut(s)	54, 157, 440, 966, 1179, 2067, 2399, 2467, 2903
BstDSI	CCRYGG	4 cut(s)	885, 1155, 1881, 2649
BstEII	GGTNACC	2 cut(s)	244, 2110
BstF5I	GGATG	8 cut(s)	337, 874, 1204, 1353, 1806, 2160, 2439, 3006
BstHHI	GCGC	2 cut(s)	114, 1005
BstMAI	GTCTC	4 cut(s)	57, 392, 868, 1082
BstMWI	GCNNNNNNNGC	5 cut(s)	111, 1464, 1867, 2882, 2939
BstNI	CCWGG	5 cut(s)	24, 1591, 2387, 2549, 2573
BstNSI	RCATGY	7 cut(s)	10, 1192, 1456, 1508, 1540, 2927, 3037
BstPI	GGTNACC	2 cut(s)	244, 2110
BstSCI	CCNGG	5 cut(s)	22, 1589, 2385, 2547, 2571
BstSFI	CTRYAG	4 cut(s)	2457, 2502, 2700, 2897
BstSLI	GKGCMC	2 cut(s)	90, 2961
BstV1I	GCAGC	9 cut(s)	151, 173, 463, 535, 1017, 1564, 2507, 2869, 2998
BstV2I	GAAGAC	2 cut(s)	1028, 1581
BstX2I	RGATCY	5 cut(s)	185, 405, 765, 1159, 1930
BstYI	RGATCY	5 cut(s)	185, 405, 765, 1159, 1930
BstZ17I	GTATAC	1 cut(s)	1064
Bsu36I	CCTNAGG	2 cut(s)	2399, 2467
BsuI	GTATCC	2 cut(s)	2405, 2537
BsuRI	GGCC	6 cut(s)	588, 1352, 1667, 1886, 2571, 2654
BtgI	CCRYGG	4 cut(s)	885, 1155, 1881, 2649
BtsCI	GGATG	8 cut(s)	337, 874, 1204, 1353, 1806, 2160, 2439, 3006
BtsI	GCAGTG	1 cut(s)	2146
BveI	ACCTGC	2 cut(s)	811, 1759
Cac8I	GCNNGC	4 cut(s)	110, 139, 501, 1538
CciI	TCATGA	1 cut(s)	1218
CfoI	GCGC	2 cut(s)	114, 1005
Cfr13I	GGNCC	4 cut(s)	43, 587, 882, 1748
CseI	GACGC	1 cut(s)	1276
CsiI	ACCWGGT	1 cut(s)	2547
Csp6I	GTAC	4 cut(s)	1563, 1732, 1894, 2437
CspCI	CAANNNNNGTGG	4 cut(s)	7, 42, 1402, 1437
CviQI	GTAC	4 cut(s)	1563, 1732, 1894, 2437
DdeI	CTNAG	9 cut(s)	54, 157, 440, 966, 1179, 2067, 2399, 2467, 2903
DraIII	CACNNNGTG	1 cut(s)	987
DrdI	GACNNNNNNGTC	1 cut(s)	1953
DriI	GACNNNNNGTC	1 cut(s)	49
DseDI	GACNNNNNNGTC	1 cut(s)	1953
EaeI	YGGCCR	2 cut(s)	1665, 2652
Eam1104I	CTCTTC	4 cut(s)	803, 920, 1524, 1678
Eam1105I	GACNNNNNGTC	1 cut(s)	49
EarI	CTCTTC	4 cut(s)	803, 920, 1524, 1678
EciI	GGCGGA	1 cut(s)	765
Ecl136II	GAGCTC	1 cut(s)	2590
Eco130I	CCWWGG	4 cut(s)	1155, 1881, 2649, 2952
Eco24I	GRGCYC	1 cut(s)	2592
Eco31I	GGTCTC	1 cut(s)	1082
Eco32I	GATATC	1 cut(s)	2377
Eco47I	GGWCC	3 cut(s)	43, 882, 1748
Eco53kI	GAGCTC	1 cut(s)	2590
Eco57I	CTGAAG	3 cut(s)	116, 258, 1979
Eco81I	CCTNAGG	2 cut(s)	2399, 2467
Eco91I	GGTNACC	2 cut(s)	244, 2110
EcoICRI	GAGCTC	1 cut(s)	2590
EcoO109I	RGGNCCY	2 cut(s)	43, 1748
EcoO65I	GGTNACC	2 cut(s)	244, 2110
EcoRI	GAATTC	2 cut(s)	2079, 2095
EcoRII	CCWGG	5 cut(s)	22, 1589, 2385, 2547, 2571
EcoRV	GATATC	1 cut(s)	2377
EcoT14I	CCWWGG	4 cut(s)	1155, 1881, 2649, 2952
EcoT38I	GRGCYC	1 cut(s)	2592
ErhI	CCWWGG	4 cut(s)	1155, 1881, 2649, 2952
FalI	AAGNNNNNCTT	2 cut(s)	1026, 1058
FaqI	GGGAC	4 cut(s)	212, 709, 1895, 1959
FbaI	TGATCA	2 cut(s)	34, 1672
FblI	GTMKAC	1 cut(s)	1063
FokI	GGATG	8 cut(s)	344, 881, 1211, 1360, 1813, 2167, 2426, 3013
FriOI	GRGCYC	1 cut(s)	2592
FspBI	CTAG	5 cut(s)	500, 1310, 2054, 2891, 2996
FspI	TGCGCA	1 cut(s)	1004
GlaI	GCGC	2 cut(s)	113, 1004
GsaI	CCCAGC	2 cut(s)	1946, 2567
GsuI	CTGGAG	2 cut(s)	278, 2031
HaeIII	GGCC	6 cut(s)	588, 1352, 1667, 1886, 2571, 2654
HapII	CCGG	2 cut(s)	1146, 2034
HgaI	GACGC	1 cut(s)	1276
HhaI	GCGC	2 cut(s)	114, 1005
Hin6I	GCGC	2 cut(s)	112, 1003
HinP1I	GCGC	2 cut(s)	112, 1003
HincII	GTYRAC	2 cut(s)	1381, 1450
HindII	GTYRAC	2 cut(s)	1381, 1450
HindIII	AAGCTT	3 cut(s)	1335, 2207, 2679
HinfI	GANTC	8 cut(s)	50, 529, 573, 677, 1436, 1530, 1985, 2013
HpaII	CCGG	2 cut(s)	1146, 2034
Hpy166II	GTNNAC	7 cut(s)	1054, 1064, 1381, 1450, 1778, 2545, 2959
Hpy8I	GTNNAC	7 cut(s)	1054, 1064, 1381, 1450, 1778, 2545, 2959
Hpy99I	CGWCG	1 cut(s)	595
HpyCH4IV	ACGT	6 cut(s)	346, 661, 698, 785, 1117, 1604
HpyF10VI	GCNNNNNNNGC	5 cut(s)	111, 1464, 1867, 2882, 2939
HpyF3I	CTNAG	9 cut(s)	54, 157, 440, 966, 1179, 2067, 2399, 2467, 2903
HpySE526I	ACGT	6 cut(s)	346, 661, 698, 785, 1117, 1604
HspAI	GCGC	2 cut(s)	112, 1003
Kpn2I	TCCGGA	1 cut(s)	2033
Ksp22I	TGATCA	2 cut(s)	34, 1672
LguI	GCTCTTC	1 cut(s)	1524
LmnI	GCTCC	8 cut(s)	297, 484, 923, 1157, 1545, 1688, 2284, 2595
Lsp1109I	GCAGC	9 cut(s)	151, 173, 463, 535, 1017, 1564, 2507, 2869, 2998
LweI	GCATC	8 cut(s)	434, 616, 990, 1189, 1686, 1879, 2507, 2929
MabI	ACCWGGT	1 cut(s)	2547
MaeI	CTAG	5 cut(s)	500, 1310, 2054, 2891, 2996
MaeII	ACGT	6 cut(s)	346, 661, 698, 785, 1117, 1604
MbiI	CCGCTC	1 cut(s)	926
MfeI	CAATTG	1 cut(s)	2531
MflI	RGATCY	5 cut(s)	185, 405, 765, 1159, 1930
MhlI	GDGCHC	4 cut(s)	90, 558, 2592, 2961
MlsI	TGGCCA	2 cut(s)	1667, 2654
MluNI	TGGCCA	2 cut(s)	1667, 2654
MlyI	GAGTC	2 cut(s)	59, 2022
MmeI	TCCRAC	6 cut(s)	288, 336, 690, 2226, 2284, 2467
Mox20I	TGGCCA	2 cut(s)	1667, 2654
MroI	TCCGGA	1 cut(s)	2033
MroXI	GAANNNNTTC	2 cut(s)	1518, 2751
MscI	TGGCCA	2 cut(s)	1667, 2654
MseI	TTAA	6 cut(s)	336, 701, 2265, 2606, 2799, 2841
MslI	CAYNNNNRTG	5 cut(s)	119, 641, 1193, 1791, 2654
Msp20I	TGGCCA	2 cut(s)	1667, 2654
MspA1I	CMGCKG	3 cut(s)	108, 164, 2902
MspI	CCGG	2 cut(s)	1146, 2034
MspR9I	CCNGG	5 cut(s)	24, 1591, 2387, 2549, 2573
MunI	CAATTG	1 cut(s)	2531
Mva1269I	GAATGC	1 cut(s)	957
MvaI	CCWGG	5 cut(s)	24, 1591, 2387, 2549, 2573
MwoI	GCNNNNNNNGC	5 cut(s)	111, 1464, 1867, 2882, 2939
NcoI	CCATGG	3 cut(s)	1155, 1881, 2649
NheI	GCTAGC	1 cut(s)	499
NlaIV	GGNNCC	9 cut(s)	87, 361, 407, 825, 883, 1153, 1292, 2091, 2280
NmuCI	GTSAC	7 cut(s)	347, 791, 958, 992, 1831, 2110, 2704
NsbI	TGCGCA	1 cut(s)	1004
NspI	RCATGY	7 cut(s)	10, 1192, 1456, 1508, 1540, 2927, 3037
OliI	CACNNNNGTG	1 cut(s)	119
PaeI	GCATGC	1 cut(s)	1540
PagI	TCATGA	1 cut(s)	1218
PciI	ACATGT	6 cut(s)	6, 1188, 1452, 1504, 2923, 3033
PciSI	GCTCTTC	1 cut(s)	1524
PctI	GAATGC	1 cut(s)	957
PdmI	GAANNNNTTC	2 cut(s)	1518, 2751
PfeI	GAWTC	6 cut(s)	529, 573, 677, 1436, 1530, 1985
PflFI	GACNNNGTC	1 cut(s)	1580
PleI	GAGTC	2 cut(s)	58, 2021
PpsI	GAGTC	2 cut(s)	58, 2021
Ppu21I	YACGTR	3 cut(s)	347, 662, 786
PpuMI	RGGWCCY	2 cut(s)	43, 1748
PscI	ACATGT	6 cut(s)	6, 1188, 1452, 1504, 2923, 3033
Psp124BI	GAGCTC	1 cut(s)	2592
Psp5II	RGGWCCY	2 cut(s)	43, 1748
Psp6I	CCWGG	5 cut(s)	22, 1589, 2385, 2547, 2571
PspEI	GGTNACC	2 cut(s)	244, 2110
PspFI	CCCAGC	2 cut(s)	1942, 2563
PspGI	CCWGG	5 cut(s)	22, 1589, 2385, 2547, 2571
PspN4I	GGNNCC	9 cut(s)	87, 361, 407, 825, 883, 1153, 1292, 2091, 2280
PspPI	GGNCC	4 cut(s)	43, 587, 882, 1748
PspPPI	RGGWCCY	2 cut(s)	43, 1748
PsuI	RGATCY	5 cut(s)	185, 405, 765, 1159, 1930
PsyI	GACNNNGTC	1 cut(s)	1580
PvuII	CAGCTG	2 cut(s)	164, 2902
RsaI	GTAC	4 cut(s)	1564, 1733, 1895, 2438
RsaNI	GTAC	4 cut(s)	1563, 1732, 1894, 2437
RseI	CAYNNNNRTG	5 cut(s)	119, 641, 1193, 1791, 2654
SacI	GAGCTC	1 cut(s)	2592
SapI	GCTCTTC	1 cut(s)	1524
SaqAI	TTAA	6 cut(s)	336, 701, 2265, 2606, 2799, 2841
Sau96I	GGNCC	4 cut(s)	43, 587, 882, 1748
SchI	GAGTC	2 cut(s)	59, 2022
ScrFI	CCNGG	5 cut(s)	24, 1591, 2387, 2549, 2573
SduI	GDGCHC	4 cut(s)	90, 558, 2592, 2961
SexAI	ACCWGGT	1 cut(s)	2547
SfaNI	GCATC	8 cut(s)	434, 616, 990, 1189, 1686, 1879, 2507, 2929
SfcI	CTRYAG	4 cut(s)	2457, 2502, 2700, 2897
SinI	GGWCC	3 cut(s)	43, 882, 1748
SmiMI	CAYNNNNRTG	5 cut(s)	119, 641, 1193, 1791, 2654
SmlI	CTYRAG	2 cut(s)	47, 2447
SmoI	CTYRAG	2 cut(s)	47, 2447
SpeI	ACTAGT	2 cut(s)	2053, 2890
SphI	GCATGC	1 cut(s)	1540
SsiI	CCGC	7 cut(s)	106, 750, 926, 1230, 1595, 1699, 2568
SspI	AATATT	1 cut(s)	1938
SspMI	CTAG	5 cut(s)	500, 1310, 2054, 2891, 2996
SstI	GAGCTC	1 cut(s)	2592
StyD4I	CCNGG	5 cut(s)	22, 1589, 2385, 2547, 2571
StyI	CCWWGG	4 cut(s)	1155, 1881, 2649, 2952
TaiI	ACGT	6 cut(s)	349, 664, 701, 788, 1120, 1607
TaqI	TCGA	6 cut(s)	949, 1512, 1650, 1815, 1851, 2742
TatI	WGTACW	2 cut(s)	1731, 2436
TauI	GCSGC	3 cut(s)	108, 1598, 2571
TfiI	GAWTC	6 cut(s)	529, 573, 677, 1436, 1530, 1985
Tru1I	TTAA	6 cut(s)	336, 701, 2265, 2606, 2799, 2841
Tru9I	TTAA	6 cut(s)	336, 701, 2265, 2606, 2799, 2841
TseFI	GTSAC	7 cut(s)	347, 791, 958, 992, 1831, 2110, 2704
TseI	GCWGC	9 cut(s)	161, 164, 476, 548, 1005, 1552, 2495, 2882, 3011
Tsp45I	GTSAC	7 cut(s)	347, 791, 958, 992, 1831, 2110, 2704
TspGWI	ACGGA	2 cut(s)	874, 1837
Tth111I	GACNNNGTC	1 cut(s)	1580
VneI	GTGCAC	1 cut(s)	2957
VpaK11BI	GGWCC	3 cut(s)	43, 882, 1748
XapI	RAATTY	5 cut(s)	259, 1486, 2079, 2095, 2172
XceI	RCATGY	7 cut(s)	10, 1192, 1456, 1508, 1540, 2927, 3037
XmiI	GTMKAC	1 cut(s)	1063
XmnI	GAANNNNTTC	2 cut(s)	1518, 2751
XspI	CTAG	5 cut(s)	500, 1310, 2054, 2891, 2996

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.