Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002542

Physical Location & Seq

Genomic Coordinates Reverse (-)

380954 .. 385615

Gene Structure 4662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G007300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3234 bp

ATGGCAGACACAAGAAGCTCTGGGCACCATTTAGACCTCGAGTCTCAGCAGACGGTGTTGCTCATAACCGGTACCAACCCGCCACGAGTCGACCACTGGCGCTGGATTTTTGTGATCCTCCAAGTGCGCAAACTCCTCATCTCATCAAGAGCCAATCGAGCTAACAAGGCATCTCCTCAATCTCTTCCTCAACTCTCATCATCCGCTATCCATTATACAGTTATCAGCACTGTTGCTGCAGGAGATACACCAGACTTGGAACTCACGGGGACTACAGAAATTTCACCTGCCTCACCTCAAGTTTCTGGAGATGTCCATTTGAGCAGGGATAGTACTGCAAGTGATGCTGAACTCCAGCATGCAAATGTTGCCAAGATAGTGAAGGACAAGGATTTTGTTTCCTTGCAGAAGTTTGGAGGCACCCGAGGAATTGCAGAGGCACTCAACACAGACTTACAAAATGGAATTCCAGGCGATCAAGAAGATATTTGTCGTCGACGCATGGTCAATGCACTCTCGACAACACAGGCTCCTGCTCCAAGCTTCTTCAAACTTCTCCTTCAATCGTGCAACAATTACACCATTGTCCTTCTCTTTGTGGCTGGATTGCTGTCAATTGGGTTTGGCATCAAGGTGGAAGGCCTAAGGACCGGTTGGTATGAAGGGGCCATCATAATGTTTGCCATCCTCATACATGTGATTGCACCTTCTATACGTGACTTCTGGCTTGAAAACTCACACAACCATAATGCAGTGATACAGACTGCAGGGATGAGTAAAAATGTAGTTGAGGCCTTCAGAGGGGGTTGTCCGTGTGAACTTTCTGTATCTGATGTTGTGCCAGGTGACTTAGTGTGTTTGAAACGGGGATCTGTGGTTCCTGCTGACGGTTTGTTTGTTTCTGGTGAGTTCTTAGTATTGGATGATGGTATGGAGACAACCATTGATGACAAGAAACCATTTATGTTCTATGGTGCAAAGGTGGTTAGTGGAAACGGTCGCATGCTAGTTACCTCTGTGGGCATGGACACGGCATTGGGTGAGCTGATGAACCGAATAGCACATACTCCTAACCGTGCCCAATTACCAGCTCAACTTGACAAGATGAACACACGCACCCAAATTGCCGGGCTCTCAATCTCTATTCTCCTCCTTGTAGTGTTGTTCTTTCGTTTCTTGCTTGAAAAGAAAGATTACAGCTCTGGCCTCCCAGAGCTTAAGGGGAAACCAGCTGCAAGTAAGGAAATAATGAATGAGATGGGGAAAATTGTCATGAAACCAAGTGGGCAGATTAGCATCTTAACAACAGCTCTGGCCATCTTGCTTGTAGGAGTAGTGGAAGGGATACCTCTTTTTGTTACACTTGCCATTACCTATTGGAATAGGAAGACAATGTCTGGCAAGGCCATTGCTCAAGGAATTTTGGCTTGTGTCACCATGGGCTCTGTCACAACCATTTGCACTGACAAAACTGGTGTGCTGACTTTGAACTCGCTGGAAGTCGACGTGTGCTATATTGGGAACGAAGTCATAGAAAATGACTGTGTCACCAGAATAGACACACGTGTTCGTGAAGCTTTGTGCAATGGAATCTGCACACCACTTTTGAAGCCGTCAAGCTCTTGCAGCTCATCAGAGGACCCGCTCCTTCCCTGGGCTGCCAATTTGGGGATGGAAATTGAGATTTTGAGGCAGAGCCACACCATCCTGGAGGCCAAGGAGTTGCGCACCAACGAGGAAGGCAGTGGAGTATTGATGAAAAAATCCAGTGACAATGAAGGAGATATGTGCTTGCATTGGAAAGGACCGGCAACAACAATATTAGCCATGTGCTCGCACTACACTGACAGCAGAGGGACAACAAAGGTCATGGATGAACAACGTAGACTGGCTTTTAACCATATTGTAGAGCACATGCAGTCCAAACATCTCAAGACCATTGCATTTGCTTACAAGCAGACTGATGTTGCAAAGCTTGAAGAAAACAGCTTAATCTTAATAGGACTACTAGGTGTGAAGTATACATGTTGCGAAGATATAATGGAAGCAGTGAAAGCTTGTCAAGAAGCAGGAGTGAACATCATATTGGTGTCAGAAGAAAAGGTGTCAAAGCTGAAAGACATTGCTGTTGCATGTGGAATACTTGCCAACTCAAACAGGTTGGTGCTCGAAGGCGAAAAGTTTCGAAATAGTAGTGCAGAAGAAAGGATGGACATTGTAGATAAAATCTGCGTGATGGGAAACTCCATTCCTTTAGACAGGCTCCTTTTGGTGCAATGCCTGAAAGAAAAAGACCACGCTGTGGCGATGGTTGGAGTCAGAACAAATGAGACTCCAACTCTTAAAGAAGCTGATGTGGGGGTTGCAATGGGGACTTGGAGTAGTGAAATGGCAAGAGAAAGTTCTGACATCATCATCTGGGATGGAAATTTTAGTTTCTTGGTCCCCATTATAAGTTGCGGAAGATGCATTTACTATAACATTCAAAAGTACATCCAACTTGAGCTCACCATGAATATAGCAGGGCTGCTGATAACAGCCACTACCACAATGGCTTCTGGAGAGAGTGCAATTACAGCAATTCAGTTATTTTGGGCAAACATGGTTGTGACTCTTCTAGGTGGGCTTGCTCTACTGATGGAGCCGCCAACAAAGGAACTAATGGAGAAGCCACCGGTCAGACGAACTGACCGGCTCATTAGCAAGGCAATGTGGAGAAACATTGTCAGTCAAGCCTTATATCAGAGTGCCATCTTGGTCAGCTTTCAACTGAAAGGGCAAACCGTTCCGGGCATCAGCAAGAAGGTTAGCGAGTCCATTGTTTTCAACAGTTTTGTTCTGTGTCATGTATTCAATCAAGTCAATTCAAGGGAGCTAGAGAAGAAGAACGTGTTCAGGGGCATACTTCACAATCAGTGGTTCTGGGTGTCTGTGGGTGGCACTCTTGTCCTGCAGGTGGCTTTTATTGAGATCTCACATATTCTTGTTGGCAATGCAAGGTTGAATTGGGCACAGTGGGGTGTGTGTCTATTAATTGGGATGGTTTCATGGGAAATTGATTTGGTTGTGAAGTGTGTATCGGGCGTTGTCGTGAATGGAACATTCAGCTCTCATGTTGGATGTATTAATAATAGTATGACACCCTCTGGTGTCTCAGGTTCTGCATCTAATCTTGAGCTCCCACTCATTGTTGGAAATTCCACAAGATCCCATGATCCTATGATCCCATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase Hydrolase

Protein Analysis

1078

Amino Acids

117.47

Weight (kDa)

6.3

Isoelectric Point (pI)

36.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002542)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00630 FvH4_3g13880
prunus_persica	Prupe.4G007300_v2.0.a1 Prupe.4G007300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0000841 RchiOBHm_Chr5g0000871
rosa_laevigata	RLG00000030901 RLG00000030902 RLG00000030903 RLG00000032693 RLG00000032697
rosa_multiflora	Rmu_co8361431.1_g000001 Rmu_sc0000255.1_g000013 Rmu_sc0000255.1_g000017 Rmu_sc0001979.1_g000005 Rmu_sc0002085.1_g000003 Rmu_sc0002085.1_g000004 Rmu_sc0010050.1_g000003 Rmu_sc0010050.1_g000006 Rmu_sc0019378.1_g000001 Rmu_sc0034511.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056260 Rroxscaffold_1G00075400
rosa_rugosa	Rorug04G0387000 Rorug04G0387100 Rorug04G0387200 Rorug05G0076900
rosa_samantha	Rh5AG006900 Rh5AG007000 Rh5AG163100 Rh5BG009000 Rh5BG009100 Rh5BG162300 Rh5CG007600 Rh5CG007700 Rh5CG177100 Rh5DG007600 Rh5DG163600
rosa_wichuraiana	Rw5G000710 Rw5G000730 Rw5G014710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2453
AarI	CACCTGC	2 cut(s)	295, 2944
Acc16I	TGCGCA	2 cut(s)	128, 1727
Acc36I	ACCTGC	2 cut(s)	295, 2944
Acc65I	GGTACC	1 cut(s)	71
AccB1I	GGYRCC	3 cut(s)	24, 71, 419
AccB7I	CCANNNNNTGG	1 cut(s)	2302
AccBSI	CCGCTC	1 cut(s)	1645
AccI	GTMKAC	5 cut(s)	90, 496, 1503, 1885, 2021
AciI	CCGC	5 cut(s)	80, 204, 1643, 2460, 2645
AclWI	GGATC	5 cut(s)	109, 877, 3201, 3209, 3217
AcoI	YGGCCR	1 cut(s)	1314
AcsI	RAATTY	5 cut(s)	279, 465, 1419, 2428, 3196
AcuI	CTGAAG	1 cut(s)	781
AcvI	CACGTG	1 cut(s)	1565
AdeI	CACNNNGTG	1 cut(s)	2302
AfaI	GTAC	3 cut(s)	73, 334, 2492
AfiI	CCNNNNNNNGG	6 cut(s)	801, 887, 1654, 1668, 2302, 2956
AflII	CTTAAG	1 cut(s)	1217
AflIII	ACRYGT	6 cut(s)	694, 1506, 1562, 1564, 2024, 2889
AgeI	ACCGGT	3 cut(s)	68, 650, 2674
AhdI	GACNNNNNGTC	2 cut(s)	40, 503
AjiI	CACGTC	1 cut(s)	1507
AjnI	CCWGG	4 cut(s)	469, 841, 1652, 1707
AjuI	GAANNNNNNNTTGG	2 cut(s)	2069, 2101
AloI	GAACNNNNNNTCC	2 cut(s)	861, 893
Alw21I	GWGCWC	5 cut(s)	1835, 1914, 2169, 2508, 3180
Alw26I	GTCTC	4 cut(s)	48, 929, 2324, 3157
AlwI	GGATC	5 cut(s)	109, 877, 3201, 3209, 3217
AlwNI	CAGNNNCTG	1 cut(s)	3161
Ama87I	CYCGRG	2 cut(s)	38, 423
AoxI	GGCC	7 cut(s)	640, 666, 792, 1204, 1314, 1404, 1713
ApeKI	GCWGC	5 cut(s)	236, 1232, 1626, 1658, 2527
ApoI	RAATTY	5 cut(s)	279, 465, 1419, 2428, 3196
ArsI	GACNNNNNNTTYG	4 cut(s)	377, 409, 878, 910
AseI	ATTAAT	2 cut(s)	3032, 3126
AsiGI	ACCGGT	3 cut(s)	68, 650, 2674
Asp700I	GAANNNNTTC	2 cut(s)	2181, 2891
Asp718I	GGTACC	1 cut(s)	71
AspLEI	GCGC	3 cut(s)	102, 129, 1728
AspS9I	GGNCC	5 cut(s)	648, 666, 1639, 1805, 2443
AsuC2I	CCSGG	2 cut(s)	1129, 2790
AsuHPI	GGTGA	8 cut(s)	276, 285, 857, 917, 1052, 1426, 1540, 2500
AsuII	TTCGAA	1 cut(s)	2185
AvaI	CYCGRG	2 cut(s)	38, 423
AvaII	GGWCC	4 cut(s)	648, 1639, 1805, 2443
AxyI	CCTNAGG	1 cut(s)	644
BaeGI	GKGCMC	3 cut(s)	27, 1081, 3013
BalI	TGGCCA	1 cut(s)	1316
BanI	GGYRCC	3 cut(s)	24, 71, 419
BanII	GRGCYC	4 cut(s)	1134, 1445, 2508, 3180
BauI	CACGAG	1 cut(s)	84
BbrPI	CACGTG	1 cut(s)	1565
BbsI	GAAGAC	1 cut(s)	1394
Bbv12I	GWGCWC	5 cut(s)	1835, 1914, 2169, 2508, 3180
BbvI	GCAGC	5 cut(s)	223, 1219, 1638, 1645, 2514
BceAI	ACGGC	2 cut(s)	1047, 1597
BciT130I	CCWGG	4 cut(s)	471, 843, 1654, 1709
BciVI	GTATCC	1 cut(s)	1338
BcnI	CCSGG	2 cut(s)	1129, 2790
BcoDI	GTCTC	4 cut(s)	48, 929, 2324, 3157
BfaI	CTAG	4 cut(s)	1007, 2009, 2618, 2876
BfmI	CTRYAG	4 cut(s)	237, 273, 765, 2951
BfoI	RGCGCY	1 cut(s)	103
BfrI	CTTAAG	1 cut(s)	1217
BfuAI	ACCTGC	2 cut(s)	295, 2944
BfuI	GTATCC	1 cut(s)	1338
BglII	AGATCT	1 cut(s)	2970
BisI	GCNGC	6 cut(s)	237, 1233, 1627, 1659, 2528, 2645
BlsI	GCNGC	6 cut(s)	238, 1234, 1628, 1660, 2529, 2646
BmcAI	AGTACT	1 cut(s)	334
Bme1390I	CCNGG	6 cut(s)	471, 843, 1129, 1654, 1709, 2790
Bme18I	GGWCC	4 cut(s)	648, 1639, 1805, 2443
BmeRI	GACNNNNNGTC	2 cut(s)	40, 503
BmeT110I	CYCGRG	2 cut(s)	38, 423
BmgBI	CACGTC	1 cut(s)	1507
BmgT120I	GGNCC	5 cut(s)	648, 666, 1639, 1805, 2443
BmrFI	CCNGG	6 cut(s)	471, 843, 1129, 1654, 1709, 2790
BmsI	GCATC	7 cut(s)	179, 334, 636, 1305, 2456, 2802, 3173
BpiI	GAAGAC	1 cut(s)	1394
BpmI	CTGGAG	4 cut(s)	327, 338, 1730, 2580
Bpu14I	TTCGAA	1 cut(s)	2185
BpuEI	CTTGAG	5 cut(s)	282, 1398, 1916, 2522, 3194
BpuMI	CCSGG	2 cut(s)	1129, 2790
BsaAI	YACGTR	2 cut(s)	716, 1565
BsaBI	GATNNNNATC	1 cut(s)	1295
BsaJI	CCNNGG	5 cut(s)	424, 1437, 1652, 1653, 1716
BsaWI	WCCGGW	3 cut(s)	68, 650, 2674
BsaXI	ACNNNNNCTCC	2 cut(s)	514, 544
Bsc4I	CCNNNNNNNGG	6 cut(s)	801, 887, 1654, 1668, 2302, 2956
Bse118I	RCCGGY	5 cut(s)	68, 650, 1807, 2674, 2691
Bse1I	ACTGG	4 cut(s)	101, 1477, 1767, 1893
Bse21I	CCTNAGG	1 cut(s)	644
Bse3DI	GCAATG	8 cut(s)	1407, 1591, 1938, 2121, 2282, 2373, 2715, 2998
Bse8I	GATNNNNATC	1 cut(s)	1295
BseBI	CCWGG	4 cut(s)	471, 843, 1654, 1709
BseDI	CCNNGG	5 cut(s)	424, 1437, 1652, 1653, 1716
BseJI	GATNNNNATC	1 cut(s)	1295
BseLI	CCNNNNNNNGG	6 cut(s)	801, 887, 1654, 1668, 2302, 2956
BseMI	GCAATG	8 cut(s)	1407, 1591, 1938, 2121, 2282, 2373, 2715, 2998
BseMII	CTCAG	2 cut(s)	59, 3168
BseNI	ACTGG	4 cut(s)	101, 1477, 1767, 1893
BseRI	GAGGAG	3 cut(s)	125, 165, 1139
BseSI	GKGCMC	3 cut(s)	27, 1081, 3013
BseXI	GCAGC	5 cut(s)	223, 1219, 1638, 1645, 2514
BsgI	GTGCAG	2 cut(s)	1579, 2217
Bsh1285I	CGRYCG	1 cut(s)	1000
BshFI	GGCC	7 cut(s)	642, 668, 794, 1206, 1316, 1406, 1715
BshNI	GGYRCC	3 cut(s)	24, 71, 419
BshTI	ACCGGT	3 cut(s)	68, 650, 2674
BsiEI	CGRYCG	1 cut(s)	1000
BsiHKAI	GWGCWC	5 cut(s)	1835, 1914, 2169, 2508, 3180
BsiHKCI	CYCGRG	2 cut(s)	38, 423
BsiSI	CCGG	7 cut(s)	69, 651, 1128, 1808, 2675, 2692, 2789
BslFI	GGGAC	4 cut(s)	283, 1870, 2386, 2429
BslI	CCNNNNNNNGG	6 cut(s)	801, 887, 1654, 1668, 2302, 2956
BsmAI	GTCTC	4 cut(s)	48, 929, 2324, 3157
BsmFI	GGGAC	4 cut(s)	283, 1870, 2386, 2429
BsnI	GGCC	7 cut(s)	642, 668, 794, 1206, 1316, 1406, 1715
BsoBI	CYCGRG	2 cut(s)	38, 423
Bsp119I	TTCGAA	1 cut(s)	2185
Bsp143I	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
Bsp19I	CCATGG	1 cut(s)	1437
BspACI	CCGC	5 cut(s)	80, 204, 1643, 2460, 2645
BspANI	GGCC	7 cut(s)	642, 668, 794, 1206, 1316, 1406, 1715
BspCNI	CTCAG	2 cut(s)	58, 3167
BspHI	TCATGA	1 cut(s)	1272
BspMAI	CTGCAG	3 cut(s)	241, 769, 2955
BspMI	ACCTGC	2 cut(s)	295, 2944
BspPI	GGATC	5 cut(s)	109, 877, 3201, 3209, 3217
BspT104I	TTCGAA	1 cut(s)	2185
BspT107I	GGYRCC	3 cut(s)	24, 71, 419
BspTI	CTTAAG	1 cut(s)	1217
BsrBI	CCGCTC	1 cut(s)	1645
BsrDI	GCAATG	8 cut(s)	1407, 1591, 1938, 2121, 2282, 2373, 2715, 2998
BsrFI	RCCGGY	5 cut(s)	68, 650, 1807, 2674, 2691
BsrI	ACTGG	4 cut(s)	101, 1477, 1767, 1893
BssAI	RCCGGY	5 cut(s)	68, 650, 1807, 2674, 2691
BssECI	CCNNGG	5 cut(s)	424, 1437, 1652, 1653, 1716
BssMI	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
BssNAI	GTATAC	1 cut(s)	2022
BssSI	CACGAG	1 cut(s)	84
BssT1I	CCWWGG	2 cut(s)	1437, 1716
Bst1107I	GTATAC	1 cut(s)	2022
Bst2BI	CACGAG	1 cut(s)	84
Bst2UI	CCWGG	4 cut(s)	471, 843, 1654, 1709
Bst6I	CTCTTC	2 cut(s)	189, 2619
BstAFI	CTTAAG	1 cut(s)	1217
BstAPI	GCANNNNNTGC	2 cut(s)	344, 368
BstBAI	YACGTR	2 cut(s)	716, 1565
BstBI	TTCGAA	1 cut(s)	2185
BstC8I	GCNNGC	5 cut(s)	360, 1004, 1793, 1835, 2628
BstDEI	CTNAG	6 cut(s)	45, 644, 850, 913, 3154, 3231
BstDSI	CCRYGG	1 cut(s)	1437
BstH2I	RGCGCY	1 cut(s)	103
BstHHI	GCGC	3 cut(s)	102, 129, 1728
BstKTI	GATC	7 cut(s)	117, 478, 872, 2973, 3209, 3217, 3225
BstMAI	GTCTC	4 cut(s)	48, 929, 2324, 3157
BstMBI	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
BstMCI	CGRYCG	1 cut(s)	1000
BstMWI	GCNNNNNNNGC	8 cut(s)	158, 167, 344, 368, 1626, 2054, 2466, 2576
BstNI	CCWGG	4 cut(s)	471, 843, 1654, 1709
BstNSI	RCATGY	6 cut(s)	362, 698, 1006, 1918, 2028, 2136
BstSCI	CCNGG	6 cut(s)	469, 841, 1127, 1652, 1707, 2788
BstSFI	CTRYAG	4 cut(s)	237, 273, 765, 2951
BstSLI	GKGCMC	3 cut(s)	27, 1081, 3013
BstV1I	GCAGC	5 cut(s)	223, 1219, 1638, 1645, 2514
BstV2I	GAAGAC	1 cut(s)	1394
BstX2I	RGATCY	3 cut(s)	869, 2970, 3206
BstYI	RGATCY	3 cut(s)	869, 2970, 3206
BstZ17I	GTATAC	1 cut(s)	2022
Bsu36I	CCTNAGG	1 cut(s)	644
BsuI	GTATCC	1 cut(s)	1338
BsuRI	GGCC	7 cut(s)	642, 668, 794, 1206, 1316, 1406, 1715
BtgI	CCRYGG	1 cut(s)	1437
BtgZI	GCGATG	1 cut(s)	2321
BtrI	CACGTC	1 cut(s)	1507
BtsI	GCAGTG	3 cut(s)	759, 1750, 2055
BveI	ACCTGC	2 cut(s)	295, 2944
Cac8I	GCNNGC	5 cut(s)	360, 1004, 1793, 1835, 2628
CaiI	CAGNNNCTG	1 cut(s)	3161
CciI	TCATGA	1 cut(s)	1272
CfoI	GCGC	3 cut(s)	102, 129, 1728
Cfr10I	RCCGGY	5 cut(s)	68, 650, 1807, 2674, 2691
Cfr13I	GGNCC	5 cut(s)	648, 666, 1639, 1805, 2443
CseI	GACGC	1 cut(s)	507
Csp6I	GTAC	3 cut(s)	72, 333, 2491
CspAI	ACCGGT	3 cut(s)	68, 650, 2674
CviQI	GTAC	3 cut(s)	72, 333, 2491
DdeI	CTNAG	6 cut(s)	45, 644, 850, 913, 3154, 3231
DpnI	GATC	7 cut(s)	116, 477, 871, 2972, 3208, 3216, 3224
DpnII	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
DraIII	CACNNNGTG	1 cut(s)	2302
DriI	GACNNNNNGTC	2 cut(s)	40, 503
EaeI	YGGCCR	1 cut(s)	1314
Eam1104I	CTCTTC	2 cut(s)	189, 2619
Eam1105I	GACNNNNNGTC	2 cut(s)	40, 503
EarI	CTCTTC	2 cut(s)	189, 2619
Ecl136II	GAGCTC	2 cut(s)	2506, 3178
Eco130I	CCWWGG	2 cut(s)	1437, 1716
Eco147I	AGGCCT	2 cut(s)	642, 794
Eco24I	GRGCYC	4 cut(s)	1134, 1445, 2508, 3180
Eco47I	GGWCC	4 cut(s)	648, 1639, 1805, 2443
Eco53kI	GAGCTC	2 cut(s)	2506, 3178
Eco57I	CTGAAG	1 cut(s)	781
Eco72I	CACGTG	1 cut(s)	1565
Eco81I	CCTNAGG	1 cut(s)	644
Eco88I	CYCGRG	2 cut(s)	38, 423
EcoICRI	GAGCTC	2 cut(s)	2506, 3178
EcoO109I	RGGNCCY	1 cut(s)	1639
EcoRI	GAATTC	1 cut(s)	465
EcoRII	CCWGG	4 cut(s)	469, 841, 1652, 1707
EcoT14I	CCWWGG	2 cut(s)	1437, 1716
EcoT22I	ATGCAT	1 cut(s)	2471
EcoT38I	GRGCYC	4 cut(s)	1134, 1445, 2508, 3180
ErhI	CCWWGG	2 cut(s)	1437, 1716
FaqI	GGGAC	4 cut(s)	283, 1870, 2386, 2429
FauI	CCCGC	2 cut(s)	87, 1650
FblI	GTMKAC	5 cut(s)	90, 496, 1503, 1885, 2021
Fnu4HI	GCNGC	6 cut(s)	237, 1233, 1627, 1659, 2528, 2645
FriOI	GRGCYC	4 cut(s)	1134, 1445, 2508, 3180
Fsp4HI	GCNGC	6 cut(s)	237, 1233, 1627, 1659, 2528, 2645
FspBI	CTAG	4 cut(s)	1007, 2009, 2618, 2876
FspI	TGCGCA	2 cut(s)	128, 1727
GlaI	GCGC	3 cut(s)	101, 128, 1727
GluI	GCNGC	6 cut(s)	237, 1233, 1627, 1659, 2528, 2645
GsuI	CTGGAG	4 cut(s)	327, 338, 1730, 2580
HaeII	RGCGCY	1 cut(s)	103
HaeIII	GGCC	7 cut(s)	642, 668, 794, 1206, 1316, 1406, 1715
HapII	CCGG	7 cut(s)	69, 651, 1128, 1808, 2675, 2692, 2789
HgaI	GACGC	1 cut(s)	507
HhaI	GCGC	3 cut(s)	102, 129, 1728
Hin6I	GCGC	3 cut(s)	100, 127, 1726
HinP1I	GCGC	3 cut(s)	100, 127, 1726
HincII	GTYRAC	3 cut(s)	91, 497, 1504
HindII	GTYRAC	3 cut(s)	91, 497, 1504
HindIII	AAGCTT	4 cut(s)	541, 1575, 1973, 2055
HinfI	GANTC	7 cut(s)	41, 87, 1590, 2316, 2332, 2611, 2813
HpaII	CCGG	7 cut(s)	69, 651, 1128, 1808, 2675, 2692, 2789
HphI	GGTGA	8 cut(s)	276, 285, 857, 917, 1052, 1426, 1540, 2500
Hpy166II	GTNNAC	7 cut(s)	91, 497, 818, 1504, 1886, 2022, 2077
Hpy188I	TCNGA	8 cut(s)	800, 832, 1636, 2095, 2321, 2407, 2681, 2745
Hpy8I	GTNNAC	7 cut(s)	91, 497, 818, 1504, 1886, 2022, 2077
Hpy99I	CGWCG	3 cut(s)	498, 501, 1508
HpyCH4IV	ACGT	5 cut(s)	715, 1506, 1564, 1882, 2889
HpyF10VI	GCNNNNNNNGC	8 cut(s)	158, 167, 344, 368, 1626, 2054, 2466, 2576
HpyF3I	CTNAG	6 cut(s)	45, 644, 850, 913, 3154, 3231
HpySE526I	ACGT	5 cut(s)	715, 1506, 1564, 1882, 2889
HspAI	GCGC	3 cut(s)	100, 127, 1726
KpnI	GGTACC	1 cut(s)	75
Kzo9I	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
LmnI	GCTCC	7 cut(s)	535, 541, 1650, 2268, 2641, 2872, 3183
Lsp1109I	GCAGC	5 cut(s)	223, 1219, 1638, 1645, 2514
LweI	GCATC	7 cut(s)	179, 334, 636, 1305, 2456, 2802, 3173
MaeI	CTAG	4 cut(s)	1007, 2009, 2618, 2876
MaeII	ACGT	5 cut(s)	715, 1506, 1564, 1882, 2889
MaeIII	GTNAC	9 cut(s)	716, 845, 1009, 1357, 1432, 1447, 1546, 1769, 2608
MalI	GATC	7 cut(s)	116, 477, 871, 2972, 3208, 3216, 3224
MbiI	CCGCTC	1 cut(s)	1645
MboI	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
MfeI	CAATTG	1 cut(s)	615
MflI	RGATCY	3 cut(s)	869, 2970, 3206
MlsI	TGGCCA	1 cut(s)	1316
MluNI	TGGCCA	1 cut(s)	1316
MlyI	GAGTC	6 cut(s)	50, 96, 2325, 2326, 2605, 2822
MmeI	TCCRAC	5 cut(s)	2293, 2360, 2521, 3097, 3172
Mox20I	TGGCCA	1 cut(s)	1316
Mph1103I	ATGCAT	1 cut(s)	2471
MroXI	GAANNNNTTC	2 cut(s)	2181, 2891
MscI	TGGCCA	1 cut(s)	1316
MseI	TTAA	8 cut(s)	1218, 1301, 1896, 1991, 1997, 2343, 3032, 3126
MslI	CAYNNNNRTG	6 cut(s)	363, 632, 674, 695, 2087, 2606
Msp20I	TGGCCA	1 cut(s)	1316
MspA1I	CMGCKG	1 cut(s)	1232
MspCI	CTTAAG	1 cut(s)	1217
MspI	CCGG	7 cut(s)	69, 651, 1128, 1808, 2675, 2692, 2789
MspR9I	CCNGG	6 cut(s)	471, 843, 1129, 1654, 1709, 2790
MunI	CAATTG	1 cut(s)	615
MvaI	CCWGG	4 cut(s)	471, 843, 1654, 1709
MwoI	GCNNNNNNNGC	8 cut(s)	158, 167, 344, 368, 1626, 2054, 2466, 2576
NciI	CCSGG	2 cut(s)	1129, 2790
NcoI	CCATGG	1 cut(s)	1437
NdeII	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
NmuCI	GTSAC	7 cut(s)	716, 845, 1432, 1447, 1546, 1769, 2608
NsbI	TGCGCA	2 cut(s)	128, 1727
NsiI	ATGCAT	1 cut(s)	2471
NspI	RCATGY	6 cut(s)	362, 698, 1006, 1918, 2028, 2136
NspV	TTCGAA	1 cut(s)	2185
PaeI	GCATGC	2 cut(s)	362, 1006
PaeR7I	CTCGAG	1 cut(s)	38
PagI	TCATGA	1 cut(s)	1272
PaqCI	CACCTGC	2 cut(s)	295, 2944
PasI	CCCWGGG	1 cut(s)	1653
PceI	AGGCCT	2 cut(s)	642, 794
PciI	ACATGT	2 cut(s)	694, 2024
PdmI	GAANNNNTTC	2 cut(s)	2181, 2891
PfeI	GAWTC	1 cut(s)	1590
PflFI	GACNNNGTC	2 cut(s)	1393, 1544
PflMI	CCANNNNNTGG	1 cut(s)	2302
PfoI	TCCNGGA	1 cut(s)	1707
PinAI	ACCGGT	3 cut(s)	68, 650, 2674
PkrI	GCNGC	6 cut(s)	238, 1234, 1628, 1660, 2529, 2646
PleI	GAGTC	6 cut(s)	49, 95, 2324, 2326, 2605, 2821
PmaCI	CACGTG	1 cut(s)	1565
PmlI	CACGTG	1 cut(s)	1565
PpsI	GAGTC	6 cut(s)	49, 95, 2324, 2326, 2605, 2821
Ppu21I	YACGTR	2 cut(s)	716, 1565
PpuMI	RGGWCCY	1 cut(s)	1639
PscI	ACATGT	2 cut(s)	694, 2024
PshBI	ATTAAT	2 cut(s)	3032, 3126
PsiI	TTATAA	1 cut(s)	2453
Psp124BI	GAGCTC	2 cut(s)	2508, 3180
Psp5II	RGGWCCY	1 cut(s)	1639
Psp6I	CCWGG	4 cut(s)	469, 841, 1652, 1707
PspCI	CACGTG	1 cut(s)	1565
PspGI	CCWGG	4 cut(s)	469, 841, 1652, 1707
PspPI	GGNCC	5 cut(s)	648, 666, 1639, 1805, 2443
PspPPI	RGGWCCY	1 cut(s)	1639
PspXI	VCTCGAGB	1 cut(s)	38
PstI	CTGCAG	3 cut(s)	241, 769, 2955
PstNI	CAGNNNCTG	1 cut(s)	3161
PsuI	RGATCY	3 cut(s)	869, 2970, 3206
PsyI	GACNNNGTC	2 cut(s)	1393, 1544
PvuII	CAGCTG	1 cut(s)	1232
RsaI	GTAC	3 cut(s)	73, 334, 2492
RsaNI	GTAC	3 cut(s)	72, 333, 2491
RseI	CAYNNNNRTG	6 cut(s)	363, 632, 674, 695, 2087, 2606
SacI	GAGCTC	2 cut(s)	2508, 3180
SalI	GTCGAC	3 cut(s)	89, 495, 1502
SaqAI	TTAA	8 cut(s)	1218, 1301, 1896, 1991, 1997, 2343, 3032, 3126
SatI	GCNGC	6 cut(s)	237, 1233, 1627, 1659, 2528, 2645
Sau3AI	GATC	7 cut(s)	114, 475, 869, 2970, 3206, 3214, 3222
Sau96I	GGNCC	5 cut(s)	648, 666, 1639, 1805, 2443
SbfI	CCTGCAGG	1 cut(s)	2955
ScaI	AGTACT	1 cut(s)	334
SchI	GAGTC	6 cut(s)	50, 96, 2325, 2326, 2605, 2822
ScrFI	CCNGG	6 cut(s)	471, 843, 1129, 1654, 1709, 2790
SdaI	CCTGCAGG	1 cut(s)	2955
SfaNI	GCATC	7 cut(s)	179, 334, 636, 1305, 2456, 2802, 3173
SfcI	CTRYAG	4 cut(s)	237, 273, 765, 2951
Sfr274I	CTCGAG	1 cut(s)	38
SfuI	TTCGAA	1 cut(s)	2185
SgrDI	CGTCGACG	1 cut(s)	495
SinI	GGWCC	4 cut(s)	648, 1639, 1805, 2443
SlaI	CTCGAG	1 cut(s)	38
SmiMI	CAYNNNNRTG	6 cut(s)	363, 632, 674, 695, 2087, 2606
SmlI	CTYRAG	7 cut(s)	38, 297, 1217, 1413, 1931, 2501, 3173
SmoI	CTYRAG	7 cut(s)	38, 297, 1217, 1413, 1931, 2501, 3173
SphI	GCATGC	2 cut(s)	362, 1006
Sse8387I	CCTGCAGG	1 cut(s)	2955
SseBI	AGGCCT	2 cut(s)	642, 794
SsiI	CCGC	5 cut(s)	80, 204, 1643, 2460, 2645
SspI	AATATT	1 cut(s)	1821
SspMI	CTAG	4 cut(s)	1007, 2009, 2618, 2876
SstI	GAGCTC	2 cut(s)	2508, 3180
StuI	AGGCCT	2 cut(s)	642, 794
StyD4I	CCNGG	6 cut(s)	469, 841, 1127, 1652, 1707, 2788
StyI	CCWWGG	2 cut(s)	1437, 1716
TaiI	ACGT	5 cut(s)	718, 1509, 1567, 1885, 2892
TaqI	TCGA	8 cut(s)	39, 90, 157, 496, 518, 1503, 2169, 2185
TatI	WGTACW	2 cut(s)	332, 2490
TauI	GCSGC	1 cut(s)	2647
TfiI	GAWTC	1 cut(s)	1590
Tru1I	TTAA	8 cut(s)	1218, 1301, 1896, 1991, 1997, 2343, 3032, 3126
Tru9I	TTAA	8 cut(s)	1218, 1301, 1896, 1991, 1997, 2343, 3032, 3126
TseFI	GTSAC	7 cut(s)	716, 845, 1432, 1447, 1546, 1769, 2608
TseI	GCWGC	5 cut(s)	236, 1232, 1626, 1658, 2527
Tsp45I	GTSAC	7 cut(s)	716, 845, 1432, 1447, 1546, 1769, 2608
TspGWI	ACGGA	1 cut(s)	801
Tth111I	GACNNNGTC	2 cut(s)	1393, 1544
Van91I	CCANNNNNTGG	1 cut(s)	2302
Vha464I	CTTAAG	1 cut(s)	1217
VpaK11BI	GGWCC	4 cut(s)	648, 1639, 1805, 2443
VspI	ATTAAT	2 cut(s)	3032, 3126
XapI	RAATTY	5 cut(s)	279, 465, 1419, 2428, 3196
XceI	RCATGY	6 cut(s)	362, 698, 1006, 1918, 2028, 2136
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1669, 2548
XhoI	CTCGAG	1 cut(s)	38
XmiI	GTMKAC	5 cut(s)	90, 496, 1503, 1885, 2021
XmnI	GAANNNNTTC	2 cut(s)	2181, 2891
XspI	CTAG	4 cut(s)	1007, 2009, 2618, 2876
ZrmI	AGTACT	1 cut(s)	334
Zsp2I	ATGCAT	1 cut(s)	2471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.