FvH4_3g02250

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0001481
Physical Location & Seq
Forward (+)
1146381 .. 1150096
3716 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g02250.t2

Sequence Viewer

Length: 1530 bp
ATGGACTACTCCAGTGATGACAATGAGCTCTCCGAACCCATCTTGATTAGCAAAAGATCTTCATCTGTTCAACCAGTGAGCTCGGAACTGGAAGAAACGCTATCCAACACTGAACTTCCGTACTTCCACCGTCTTCGGCGTGCGACGTGGGTCGAACTGAAGATTCTCTTCCGCCTTGCCGCTCCGGCAGTGGTGGTTTACTTGCTCAACAATGTCATCTCCATGTCCACCCAAATCTACTGCGGCCATCTCGGCAATCTCGAACTCGCTGCCTCTTCTCTTGGCAACACCGGCATCCAAGTCTTTGCCTACGGCCTCATGCTTGGAATGGGAAGTGCAGTGGAGACACTGTGCGGTCAAGCCTATGGAGCACACAAATATGAGATGCTAGGAATATATCTGCAGCGTTCAACAATCCTGCTAATGGCAACTGGGATCCCAGTTATGTTCATCTACATCTTCTCCAAGCCACTCTTGCTTGCCCTAGGCGAATCGAGCACCATTGCCTCTGCCGCTGCCATCTTCGTTTATGGACTCATCCCTCAAATTTTCGCCTACGCTTGCAATTTCCCCATACAAAAATTCCTTCAGGCTCAGAGCATCGTGTTCCCGAGCGCGTACATATCCGCGGCCGCGCTCGTGGTGCATGTGGTGCTGAGCTGGGTGGTGATTTATGAGTTGGGATGGGGGTTGATTGGCGCATCGCTGATGTTGAGCTTTTCGTGGTGGATTATAGTGGTGGCGCAGTTTGTATACATACTGGTGAGTCCAAGATGTAAACGTACTTGGAGAGGTTTTAGCATGCAGGCGTTTTCTGGGCTTTGGAGTTTTTTGAAGCTGTCAGTTGCGTCTGCCATAATGCTTTGCCTCGAGACTTGGTATTACCAGATTATCGTTTTGCTTGCTGGGTTGCTTGAAGACGCTGAAATTGCCTTGGACGCTCTCTCTGTTTGCATGACCATATCTGGATGGGTGTACATGGTTGCTGTGGGTTTCAATGCTGCTGCAAGTGTGAGGGTTGGGAATGAGCTCGGGGCAGGTCATCCAAAATCGGCCGCATTTGCAGTAATAATAGTGACATCAAGCTCGTTCATCATCTCCGTAGTGTGTGCCATAGTTGTGCTTGCATTACGAAATGTGATAAGCTACGCGTTCACTGAGGGTGAGACTGTGTCCAATGCAGTCTCAGCCCTATCTCCTTACCTTGCTGTCTCTATTATCCTCAACGGCATCCAACCTGTTTTGTCTGGGGTTGCTGTTGGTTGTGGATGGCAAGCATTTGTGGCATATGTTAACGTCGGGTGTTACTACATTATTGGTATTCCTCTGGGCTGTGTTCTTGGCTTCAAGTTCGACTTTGGAGCCCAGGGAATATGGTCCGGCATGATAGGAGGGACGTTTATACAAACATTGATCTTATTATGGGTCACATTTCGGACTGACTGGAAGAAAGAGGTCGAAAATGTAAAGAATCGTTTGGACAGATGGGATGACAAGAAAGAGCCTCTTCTCACAGAACAGATAGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

510

Amino Acids

55.57

Weight (kDa)

5.81

Isoelectric Point (pI)

31.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 1 - 113 1.3e-24 MatE
MatE PF01554 175 - 335 3e-30 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1028
AccBSI CCGCTC 1 cut(s) 182
AccI GTMKAC 1 cut(s) 753
AccII CGCG 4 cut(s) 617, 629, 635, 1151
AciI CCGC 9 cut(s) 172, 180, 243, 354, 513, 627, 629, 633, 1056
AclWI GGATC 2 cut(s) 430, 443
AcoI YGGCCR 3 cut(s) 244, 630, 1053
AcsI RAATTY 2 cut(s) 546, 581
AcuI CTGAAG 2 cut(s) 179, 572
AfaI GTAC 4 cut(s) 122, 620, 784, 977
AfiI CCNNNNNNNGG 1 cut(s) 424
AflIII ACRYGT 1 cut(s) 1149
AgsI TTSAA 6 cut(s) 71, 411, 835, 917, 997, 1348
AjiI CACGTC 1 cut(s) 147
AjnI CCWGG 1 cut(s) 1365
AluBI AGCT 8 cut(s) 28, 81, 660, 717, 838, 1030, 1086, 1146
AluI AGCT 8 cut(s) 28, 81, 660, 717, 838, 1030, 1086, 1146
Alw21I GWGCWC 5 cut(s) 30, 83, 373, 500, 1032
Alw26I GTCTC 5 cut(s) 338, 866, 1160, 1189, 1216
AlwI GGATC 2 cut(s) 430, 443
Ama87I CYCGRG 3 cut(s) 610, 869, 1031
AoxI GGCC 4 cut(s) 244, 313, 630, 1053
ApeKI GCWGC 5 cut(s) 269, 403, 515, 1001, 1004
ApoI RAATTY 2 cut(s) 546, 581
AspA2I CCTAGG 1 cut(s) 484
AspLEI GCGC 4 cut(s) 617, 637, 701, 745
AspS9I GGNCC 1 cut(s) 1377
AsuHPI GGTGA 3 cut(s) 679, 775, 1175
AvaI CYCGRG 3 cut(s) 610, 869, 1031
AvaII GGWCC 1 cut(s) 1377
AvrII CCTAGG 1 cut(s) 484
BamHI GGATCC 1 cut(s) 435
BanII GRGCYC 4 cut(s) 30, 83, 1032, 1366
BauI CACGAG 1 cut(s) 638
BbsI GAAGAC 2 cut(s) 125, 924
Bbv12I GWGCWC 5 cut(s) 30, 83, 373, 500, 1032
BbvI GCAGC 5 cut(s) 256, 415, 502, 988, 991
BccI CCATC 7 cut(s) 47, 255, 527, 678, 963, 1263, 1479
BceAI ACGGC 2 cut(s) 328, 1243
BcgI CGANNNNNNTGC 2 cut(s) 251, 285
BciT130I CCWGG 1 cut(s) 1367
BcoDI GTCTC 5 cut(s) 338, 866, 1160, 1189, 1216
BfaI CTAG 2 cut(s) 389, 485
BfmI CTRYAG 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 1028
BglI GCCNNNNNGGC 2 cut(s) 185, 252
BglII AGATCT 1 cut(s) 56
BlnI CCTAGG 1 cut(s) 484
BlpI GCTNAGC 1 cut(s) 656
Bme1390I CCNGG 1 cut(s) 1367
Bme18I GGWCC 1 cut(s) 1377
BmeT110I CYCGRG 3 cut(s) 610, 869, 1031
BmgBI CACGTC 1 cut(s) 147
BmgT120I GGNCC 1 cut(s) 1377
BmiI GGNNCC 2 cut(s) 437, 1363
BmrFI CCNGG 1 cut(s) 1367
BmrI ACTGGG 2 cut(s) 434, 441
BmsI GCATC 5 cut(s) 303, 375, 609, 710, 1239
BmuI ACTGGG 2 cut(s) 434, 441
BoxI GACNNNNGTC 1 cut(s) 149
BpiI GAAGAC 2 cut(s) 125, 924
Bpu1102I GCTNAGC 1 cut(s) 656
BsaBI GATNNNNATC 1 cut(s) 61
BsaJI CCNNGG 5 cut(s) 484, 627, 933, 1365, 1366
BsaXI ACNNNNNCTCC 4 cut(s) 335, 365, 446, 476
Bsc4I CCNNNNNNNGG 1 cut(s) 424
Bse118I RCCGGY 1 cut(s) 290
Bse1I ACTGG 7 cut(s) 12, 74, 93, 436, 440, 765, 1448
Bse3DI GCAATG 1 cut(s) 501
Bse8I GATNNNNATC 1 cut(s) 61
BseBI CCWGG 1 cut(s) 1367
BseDI CCNNGG 5 cut(s) 484, 627, 933, 1365, 1366
BseGI GGATG 8 cut(s) 294, 537, 689, 974, 1042, 1230, 1274, 1495
BseJI GATNNNNATC 1 cut(s) 61
BseLI CCNNNNNNNGG 1 cut(s) 424
BseMI GCAATG 1 cut(s) 501
BseMII CTCAG 4 cut(s) 608, 647, 1149, 1200
BseNI ACTGG 7 cut(s) 12, 74, 93, 436, 440, 765, 1448
BseX3I CGGCCG 2 cut(s) 630, 1053
BseXI GCAGC 5 cut(s) 256, 415, 502, 988, 991
BseYI CCCAGC 2 cut(s) 660, 905
BsgI GTGCAG 1 cut(s) 357
Bsh1236I CGCG 4 cut(s) 617, 629, 635, 1151
Bsh1285I CGRYCG 2 cut(s) 633, 1056
BshFI GGCC 4 cut(s) 246, 315, 632, 1055
BsiEI CGRYCG 2 cut(s) 633, 1056
BsiHKAI GWGCWC 5 cut(s) 30, 83, 373, 500, 1032
BsiHKCI CYCGRG 3 cut(s) 610, 869, 1031
BsiSI CCGG 3 cut(s) 185, 291, 1380
BslFI GGGAC 1 cut(s) 1408
BslI CCNNNNNNNGG 1 cut(s) 424
BsmAI GTCTC 5 cut(s) 338, 866, 1160, 1189, 1216
BsmFI GGGAC 1 cut(s) 1408
BsnI GGCC 4 cut(s) 246, 315, 632, 1055
BsoBI CYCGRG 3 cut(s) 610, 869, 1031
Bsp1286I GDGCHC 6 cut(s) 30, 83, 373, 500, 1032, 1366
Bsp1407I TGTACA 1 cut(s) 975
Bsp143I GATC 3 cut(s) 56, 435, 1413
Bsp1720I GCTNAGC 1 cut(s) 656
BspACI CCGC 9 cut(s) 172, 180, 243, 354, 513, 627, 629, 633, 1056
BspANI GGCC 4 cut(s) 246, 315, 632, 1055
BspCNI CTCAG 4 cut(s) 607, 648, 1150, 1199
BspFNI CGCG 4 cut(s) 617, 629, 635, 1151
BspLI GGNNCC 2 cut(s) 437, 1363
BspMAI CTGCAG 1 cut(s) 405
BspMI ACCTGC 1 cut(s) 1028
BspPI GGATC 2 cut(s) 430, 443
BsrBI CCGCTC 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 501
BsrFI RCCGGY 1 cut(s) 290
BsrGI TGTACA 1 cut(s) 975
BsrI ACTGG 7 cut(s) 12, 74, 93, 436, 440, 765, 1448
BssAI RCCGGY 1 cut(s) 290
BssECI CCNNGG 5 cut(s) 484, 627, 933, 1365, 1366
BssMI GATC 3 cut(s) 56, 435, 1413
BssNAI GTATAC 1 cut(s) 754
BssSI CACGAG 1 cut(s) 638
BssT1I CCWWGG 2 cut(s) 484, 933
Bst1107I GTATAC 1 cut(s) 754
Bst2BI CACGAG 1 cut(s) 638
Bst2UI CCWGG 1 cut(s) 1367
Bst4CI ACNGT 3 cut(s) 131, 351, 1171
Bst6I CTCTTC 3 cut(s) 173, 280, 1512
BstAPI GCANNNNNTGC 1 cut(s) 652
BstAUI TGTACA 1 cut(s) 975
BstC8I GCNNGC 8 cut(s) 141, 480, 562, 803, 807, 903, 1125, 1275
BstDEI CTNAG 4 cut(s) 594, 656, 1158, 1186
BstDSI CCRYGG 1 cut(s) 627
BstF5I GGATG 8 cut(s) 294, 537, 689, 974, 1042, 1230, 1274, 1495
BstFNI CGCG 4 cut(s) 617, 629, 635, 1151
BstHHI GCGC 4 cut(s) 617, 637, 701, 745
BstKTI GATC 3 cut(s) 59, 438, 1416
BstMAI GTCTC 5 cut(s) 338, 866, 1160, 1189, 1216
BstMBI GATC 3 cut(s) 56, 435, 1413
BstMCI CGRYCG 2 cut(s) 633, 1056
BstNI CCWGG 1 cut(s) 1367
BstNSI RCATGY 2 cut(s) 650, 805
BstPAI GACNNNNGTC 1 cut(s) 149
BstSCI CCNGG 1 cut(s) 1365
BstSFI CTRYAG 1 cut(s) 401
BstUI CGCG 4 cut(s) 617, 629, 635, 1151
BstV1I GCAGC 5 cut(s) 256, 415, 502, 988, 991
BstV2I GAAGAC 2 cut(s) 125, 924
BstX2I RGATCY 2 cut(s) 56, 435
BstYI RGATCY 2 cut(s) 56, 435
BstZ17I GTATAC 1 cut(s) 754
BstZI CGGCCG 2 cut(s) 630, 1053
BsuRI GGCC 4 cut(s) 246, 315, 632, 1055
BtgI CCRYGG 1 cut(s) 627
BtgZI GCGATG 1 cut(s) 687
BtrI CACGTC 1 cut(s) 147
BtsCI GGATG 8 cut(s) 294, 537, 689, 974, 1042, 1230, 1274, 1495
BtsI GCAGTG 2 cut(s) 195, 345
BtsIMutI CAGTG 7 cut(s) 19, 81, 108, 195, 345, 347, 1155
BveI ACCTGC 1 cut(s) 1028
Cac8I GCNNGC 8 cut(s) 141, 480, 562, 803, 807, 903, 1125, 1275
CciNI GCGGCCGC 1 cut(s) 630
CfoI GCGC 4 cut(s) 617, 637, 701, 745
Cfr10I RCCGGY 1 cut(s) 290
Cfr13I GGNCC 1 cut(s) 1377
Cfr42I CCGCGG 1 cut(s) 630
CseI GACGC 3 cut(s) 837, 929, 947
Csp6I GTAC 4 cut(s) 121, 619, 783, 976
CviAII CATG 7 cut(s) 223, 319, 647, 802, 955, 979, 1384
CviQI GTAC 4 cut(s) 121, 619, 783, 976
DdeI CTNAG 4 cut(s) 594, 656, 1158, 1186
DpnI GATC 3 cut(s) 58, 437, 1415
DpnII GATC 3 cut(s) 56, 435, 1413
EaeI YGGCCR 3 cut(s) 244, 630, 1053
EagI CGGCCG 2 cut(s) 630, 1053
Eam1104I CTCTTC 3 cut(s) 173, 280, 1512
EarI CTCTTC 3 cut(s) 173, 280, 1512
EciI GGCGGA 1 cut(s) 161
Ecl136II GAGCTC 3 cut(s) 28, 81, 1030
EclXI CGGCCG 2 cut(s) 630, 1053
Eco130I CCWWGG 2 cut(s) 484, 933
Eco24I GRGCYC 4 cut(s) 30, 83, 1032, 1366
Eco47I GGWCC 1 cut(s) 1377
Eco52I CGGCCG 2 cut(s) 630, 1053
Eco53kI GAGCTC 3 cut(s) 28, 81, 1030
Eco57I CTGAAG 2 cut(s) 179, 572
Eco88I CYCGRG 3 cut(s) 610, 869, 1031
EcoICRI GAGCTC 3 cut(s) 28, 81, 1030
EcoRII CCWGG 1 cut(s) 1365
EcoT14I CCWWGG 2 cut(s) 484, 933
EcoT38I GRGCYC 4 cut(s) 30, 83, 1032, 1366
ErhI CCWWGG 2 cut(s) 484, 933
FaeI CATG 7 cut(s) 226, 322, 650, 805, 958, 982, 1387
FalI AAGNNNNNCTT 8 cut(s) 152, 184, 458, 490, 1340, 1372, 1491, 1523
FaqI GGGAC 1 cut(s) 1408
FatI CATG 7 cut(s) 222, 318, 646, 801, 954, 978, 1383
FauNDI CATATG 1 cut(s) 1288
FblI GTMKAC 1 cut(s) 753
FokI GGATG 8 cut(s) 281, 524, 696, 981, 1029, 1217, 1281, 1502
FriOI GRGCYC 4 cut(s) 30, 83, 1032, 1366
FspBI CTAG 2 cut(s) 389, 485
GlaI GCGC 4 cut(s) 616, 636, 700, 744
GsaI CCCAGC 2 cut(s) 664, 909
HaeIII GGCC 4 cut(s) 246, 315, 632, 1055
HapII CCGG 3 cut(s) 185, 291, 1380
HgaI GACGC 3 cut(s) 837, 929, 947
HhaI GCGC 4 cut(s) 617, 637, 701, 745
Hin1II CATG 7 cut(s) 226, 322, 650, 805, 958, 982, 1387
Hin6I GCGC 4 cut(s) 615, 635, 699, 743
HinP1I GCGC 4 cut(s) 615, 635, 699, 743
HincII GTYRAC 1 cut(s) 1294
HindII GTYRAC 1 cut(s) 1294
HinfI GANTC 5 cut(s) 163, 491, 534, 766, 1471
HpaI GTTAAC 1 cut(s) 1294
HpaII CCGG 3 cut(s) 185, 291, 1380
HphI GGTGA 3 cut(s) 679, 775, 1175
Hpy166II GTNNAC 7 cut(s) 199, 228, 754, 779, 976, 1155, 1294
Hpy188I TCNGA 4 cut(s) 34, 85, 597, 1437
Hpy188III TCNNGA 5 cut(s) 43, 260, 610, 871, 966
Hpy8I GTNNAC 7 cut(s) 199, 228, 754, 779, 976, 1155, 1294
Hpy99I CGWCG 2 cut(s) 148, 1301
HpyAV CCTTC 1 cut(s) 596
HpyCH4III ACNGT 3 cut(s) 131, 351, 1171
HpyCH4IV ACGT 4 cut(s) 146, 781, 1296, 1397
HpyF3I CTNAG 4 cut(s) 594, 656, 1158, 1186
HpySE526I ACGT 4 cut(s) 146, 781, 1296, 1397
Hsp92II CATG 7 cut(s) 226, 322, 650, 805, 958, 982, 1387
HspAI GCGC 4 cut(s) 615, 635, 699, 743
KspAI GTTAAC 1 cut(s) 1294
KspI CCGCGG 1 cut(s) 630
Kzo9I GATC 3 cut(s) 56, 435, 1413
LmnI GCTCC 3 cut(s) 187, 368, 1361
Lsp1109I GCAGC 5 cut(s) 256, 415, 502, 988, 991
LweI GCATC 5 cut(s) 303, 375, 609, 710, 1239
MaeI CTAG 2 cut(s) 389, 485
MaeII ACGT 4 cut(s) 146, 781, 1296, 1397
MaeIII GTNAC 3 cut(s) 1075, 1304, 1426
MalI GATC 3 cut(s) 58, 437, 1415
MbiI CCGCTC 1 cut(s) 182
MboI GATC 3 cut(s) 56, 435, 1413
MflI RGATCY 2 cut(s) 56, 435
MhlI GDGCHC 6 cut(s) 30, 83, 373, 500, 1032, 1366
MluCI AATT 4 cut(s) 546, 565, 581, 927
MluI ACGCGT 1 cut(s) 1149
MlyI GAGTC 2 cut(s) 528, 775
MmeI TCCRAC 2 cut(s) 129, 1258
MseI TTAA 1 cut(s) 1293
MslI CAYNNNNRTG 4 cut(s) 221, 378, 761, 1118
MspA1I CMGCKG 2 cut(s) 515, 629
MspI CCGG 3 cut(s) 185, 291, 1380
MspR9I CCNGG 1 cut(s) 1367
MvaI CCWGG 1 cut(s) 1367
MvnI CGCG 4 cut(s) 617, 629, 635, 1151
NdeI CATATG 1 cut(s) 1288
NdeII GATC 3 cut(s) 56, 435, 1413
NlaIII CATG 7 cut(s) 226, 322, 650, 805, 958, 982, 1387
NlaIV GGNNCC 2 cut(s) 437, 1363
NmeAIII GCCGAG 1 cut(s) 231
NmuCI GTSAC 2 cut(s) 1075, 1426
NotI GCGGCCGC 1 cut(s) 630
NspI RCATGY 2 cut(s) 650, 805
PaeI GCATGC 1 cut(s) 805
PaeR7I CTCGAG 1 cut(s) 869
PasI CCCWGGG 1 cut(s) 1366
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PfeI GAWTC 3 cut(s) 163, 491, 1471
PflFI GACNNNGTC 1 cut(s) 1171
PleI GAGTC 2 cut(s) 528, 774
PpsI GAGTC 2 cut(s) 528, 774
PshAI GACNNNNGTC 1 cut(s) 149
Psp124BI GAGCTC 3 cut(s) 30, 83, 1032
Psp6I CCWGG 1 cut(s) 1365
PspFI CCCAGC 2 cut(s) 660, 905
PspGI CCWGG 1 cut(s) 1365
PspN4I GGNNCC 2 cut(s) 437, 1363
PspPI GGNCC 1 cut(s) 1377
PstI CTGCAG 1 cut(s) 405
PsuI RGATCY 2 cut(s) 56, 435
PsyI GACNNNGTC 1 cut(s) 1171
RsaI GTAC 4 cut(s) 122, 620, 784, 977
RsaNI GTAC 4 cut(s) 121, 619, 783, 976
RseI CAYNNNNRTG 4 cut(s) 221, 378, 761, 1118
SacI GAGCTC 3 cut(s) 30, 83, 1032
SacII CCGCGG 1 cut(s) 630
SaqAI TTAA 1 cut(s) 1293
Sau3AI GATC 3 cut(s) 56, 435, 1413
Sau96I GGNCC 1 cut(s) 1377
SchI GAGTC 2 cut(s) 528, 775
ScrFI CCNGG 1 cut(s) 1367
SduI GDGCHC 6 cut(s) 30, 83, 373, 500, 1032, 1366
SfaNI GCATC 5 cut(s) 303, 375, 609, 710, 1239
SfcI CTRYAG 1 cut(s) 401
Sfr274I CTCGAG 1 cut(s) 869
Sfr303I CCGCGG 1 cut(s) 630
SgrBI CCGCGG 1 cut(s) 630
SinI GGWCC 1 cut(s) 1377
SlaI CTCGAG 1 cut(s) 869
SmiMI CAYNNNNRTG 4 cut(s) 221, 378, 761, 1118
SmlI CTYRAG 1 cut(s) 869
SmoI CTYRAG 1 cut(s) 869
SphI GCATGC 1 cut(s) 805
Sse9I AATT 4 cut(s) 546, 565, 581, 927
SsiI CCGC 9 cut(s) 172, 180, 243, 354, 513, 627, 629, 633, 1056
SspMI CTAG 2 cut(s) 389, 485
SstI GAGCTC 3 cut(s) 30, 83, 1032
StyD4I CCNGG 1 cut(s) 1365
StyI CCWWGG 2 cut(s) 484, 933
TaaI ACNGT 3 cut(s) 131, 351, 1171
TaiI ACGT 4 cut(s) 149, 784, 1299, 1400
TaqI TCGA 6 cut(s) 153, 261, 494, 870, 1353, 1458
TasI AATT 4 cut(s) 546, 565, 581, 927
TatI WGTACW 1 cut(s) 975
TauI GCSGC 6 cut(s) 182, 246, 515, 632, 635, 1058
TfiI GAWTC 3 cut(s) 163, 491, 1471
Tru1I TTAA 1 cut(s) 1293
Tru9I TTAA 1 cut(s) 1293
TscAI CASTG 7 cut(s) 19, 81, 115, 195, 345, 354, 1162
TseFI GTSAC 2 cut(s) 1075, 1426
TseI GCWGC 5 cut(s) 269, 403, 515, 1001, 1004
Tsp45I GTSAC 2 cut(s) 1075, 1426
TspDTI ATGAA 3 cut(s) 51, 439, 1081
TspGWI ACGGA 2 cut(s) 108, 1090
TspRI CASTG 7 cut(s) 19, 81, 115, 195, 345, 354, 1162
Tth111I GACNNNGTC 1 cut(s) 1171
VpaK11BI GGWCC 1 cut(s) 1377
XapI RAATTY 2 cut(s) 546, 581
XceI RCATGY 2 cut(s) 650, 805
XhoI CTCGAG 1 cut(s) 869
XmaJI CCTAGG 1 cut(s) 484
XmiI GTMKAC 1 cut(s) 753
XspI CTAG 2 cut(s) 389, 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.