Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0001481

Physical Location & Seq

Genomic Coordinates Forward (+)

76520521 .. 76547258

Gene Structure 26738 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG555800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGGGTTCTTCCCAAGACGATACCTACCAACCTCTCCTTCAACCCATTTCATCCTCCCCATCCTTAACAGATAAGCATGACCACTCGAGTAGCACTGAGCTGGAAAGAATATTATCCGACACAGATAGGCCGTTCTTGCAGCGTCTCAAACCTGCTCTATGGATCGAGTCGAAGCTCCTTTTCTTCCTCGCCGGTCCGGCAGTGGTCGTCTACATGATCAACTACGTTATGTCCATGTCCACCCAAATCTTCTCCGGCCACCTTGGTAATCTTGAGCTAGCCGCTGCTTCTCTCGGAAACAATGGAATCCAAGTGTTCGCCTATGGCCTCATGTTAGGCATGGGAAGTGCGGTGGAGACGCTATGTGGACAAGCATATGGAGCTCAAAAGTACGAAATGCTAGGCATATATCTACAAAGATCAACCATCCTCCTAACGTTGGTCGGTTTCCTCCTCACCTTGGTCTACATCTTCTCAGAACCAGCTCTAATCTTTCTCGGCGAGTCCCCGAGAATCGCCGCTGCCGCCGCCATTTACGTCTACGGCCTGATCCCTCAAATCTTTGCCTACGCCGTCAACTTCCCGATCCAGAAATTCCTCCAAGCTCAAAGCATAGTGACTCCAAGTGCATACATATCAGCAGTGACACTAGCCGTACACCTCTTGCTTGTTAACTGGGTGGCCGTGTACAAGATTGGGCTTGGGCTTCTGGGCGCGTCGCTGGTGCTCAGCCTGTCGTGGTGGATCACTGTGGTGGCGCAGTTTGTATACATCGTGAAAAGCGAGAGGTGCAGGCACACGTGGAGCGGTTTTACGTGGCAAGCGTTCACCGGGTTGTATGGATTCTTCAAATTATCGGTGGCGTCTGCAGTGATGCTTTGTTTAGAGACGTGGTATTTTCAGATTCTGGTTCTGCTGGCTGGCTTGCTGGAAAATCCTGAGTTGGCTCTTGACTCGCTCTCGATTTGCACGACTATATCAGGATGGGTGTTCATGATCTCAGTTGGGTTAAATGCAGCTGCAAGTGTGCGAGTAAGCAATGAGCTTGGAGCCGGAAATCCCAAGTCCACAGCATTTTCTGTCATCGTGGTGACTACGATCTCCTTCATCATCTCCGTCATCGCAGCAACAGTTGTTCTTATTTTTCGTGATGTTATCAGCTACGCCTTCACGGAGGGTGAAGTCGTGGCCGCTGCTGTCTCAGATCTTACCCCTCTTCTTGCCCTCACCCTCCTCCTCAATGGAATTCAGCCTGTCTTGTCCGGTGTTGCTGTTGGGTGTGGATGGCAAGCTTTTGTGGCGTATGTAAATGTGGGCTGTTATTACTTTGTTGGAGTACCACTTGGTGCCCTTCTTGGATTTTACTTCAACTTTGGCGCTAAGTATTCGGATTGGATCTCGAAAAATGAGTTGGGGGCGGTGGAGGATCGAGATGCAGCAGAAGATGCGAGATCGGAGAACGATGACGTAGCGGCGGAGTGTTGGAAGTGTGGAAATCGAAGGAGGAACTGTGGATATCAACCAATCTACCATTCAACTTGTATGGATGTTCCCGTCGTTGACATCGAAGCCTGGAGAAATCACCACCAAGATCGCGTCCTAGTAGTAACAACGCGGGCTGCGGAGGCCTTCTTGGGATTCTCGAAGGTCGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0016020 GO:0022857 GO:0031090 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

551

Amino Acids

60.02

Weight (kDa)

5.33

Isoelectric Point (pI)

30.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	66 - 223	4e-34	MatE
MatE	PF01554	289 - 450	1.1e-29	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21690
fragaria_vesca	FvH4_3g02250 FvH4_3g02250 FvH4_6g43220 FvH4_6g43220
malus_domestica	MD05G1344500.v1.1 MD05G1344900.v1.1 MD09G1108500.v1.1 MD17G1096400.v1.1
prunus_persica	Prupe.3G217600_v2.0.a1 Prupe.3G217600_v2.0.a1 Prupe.3G217600_v2.0.a1 Prupe.4G021900_v2.0.a1
pyrus_communis	pycom05g31380 pycom09g03100 pycom17g09250
rosa_chinensis	RchiOBHm_Chr2g0159351 RchiOBHm_Chr2g0159471 RchiOBHm_Chr5g0003321 RchiOBHm_Chr5g0003371
rosa_laevigata	RLG00000021157 RLG00000021161 RLG00000031126 RLG00000031130
rosa_multiflora	Rmu_sc0004800.1_g000007 Rmu_sc0006842.1_g000002 Rmu_sc0007710.1_g000003 Rmu_sc0010917.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072650
rosa_rugosa	Rorug02G0475900 Rorug02G0476200 Rorug02G0476300 Rorug02G0476500 Rorug02G0476600 Rorug02G0476700 Rorug04G0402700.1 Rorug04G0402800
rosa_samantha	Rh2AG542800 Rh2AG543100 Rh2BG555300 Rh2BG555800 Rh2DG564900 Rh2DG565200 Rh5AG028800 Rh5BG028900 Rh5DG029400
rosa_wichuraiana	Rw2G044870 Rw2G044920 Rw5G002370 Rw5G002680 Rw5G002730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	160
AccB1I	GGYRCC	1 cut(s)	1346
AccBSI	CCGCTC	1 cut(s)	807
AccI	GTMKAC	4 cut(s)	210, 465, 540, 768
AccII	CGCG	3 cut(s)	716, 1596, 1615
AclI	AACGTT	1 cut(s)	437
AclWI	GGATC	6 cut(s)	170, 544, 580, 752, 1403, 1434
AcoI	YGGCCR	3 cut(s)	256, 681, 1188
AcsI	RAATTY	2 cut(s)	593, 1245
AcvI	CACGTG	1 cut(s)	801
AcyI	GRCGYC	1 cut(s)	863
AdeI	CACNNNGTG	1 cut(s)	1346
AfaI	GTAC	4 cut(s)	392, 657, 689, 1338
AfiI	CCNNNNNNNGG	2 cut(s)	439, 460
AflIII	ACRYGT	1 cut(s)	798
AgsI	TTSAA	4 cut(s)	41, 850, 1369, 1536
AjiI	CACGTC	1 cut(s)	891
AjnI	CCWGG	1 cut(s)	1571
AjuI	GAANNNNNNNTTGG	6 cut(s)	21, 53, 1394, 1426, 1516, 1548
AleI	CACNNNNGTG	1 cut(s)	752
Alw21I	GWGCWC	2 cut(s)	385, 729
Alw26I	GTCTC	4 cut(s)	149, 350, 881, 1204
AlwI	GGATC	6 cut(s)	170, 544, 580, 752, 1403, 1434
AlwNI	CAGNNNCTG	1 cut(s)	907
Ama87I	CYCGRG	2 cut(s)	85, 508
AoxI	GGCC	7 cut(s)	128, 256, 325, 544, 681, 1188, 1626
ApeKI	GCWGC	9 cut(s)	139, 284, 521, 1016, 1019, 1124, 1193, 1436, 1619
ApoI	RAATTY	2 cut(s)	593, 1245
AspLEI	GCGC	3 cut(s)	716, 760, 1379
AspS9I	GGNCC	1 cut(s)	194
AsuC2I	CCSGG	1 cut(s)	832
AsuHPI	GGTGA	6 cut(s)	448, 820, 1102, 1190, 1219, 1574
AsuNHI	GCTAGC	1 cut(s)	277
AvaI	CYCGRG	2 cut(s)	85, 508
AvaII	GGWCC	1 cut(s)	194
BaeGI	GKGCMC	1 cut(s)	1351
BanI	GGYRCC	1 cut(s)	1346
BanII	GRGCYC	1 cut(s)	385
BarI	GAAGNNNNNNTAC	2 cut(s)	830, 862
BbrPI	CACGTG	1 cut(s)	801
Bbv12I	GWGCWC	2 cut(s)	385, 729
BbvI	GCAGC	9 cut(s)	151, 271, 508, 1006, 1028, 1136, 1180, 1448, 1606
BccI	CCATC	4 cut(s)	67, 434, 978, 1278
BceAI	ACGGC	5 cut(s)	115, 557, 559, 638, 668
BciT130I	CCWGG	1 cut(s)	1573
BclI	TGATCA	1 cut(s)	216
BcnI	CCSGG	1 cut(s)	832
BcoDI	GTCTC	4 cut(s)	149, 350, 881, 1204
BfaI	CTAG	5 cut(s)	278, 401, 650, 1601, 1654
BfmI	CTRYAG	1 cut(s)	867
BfoI	RGCGCY	1 cut(s)	1380
BfuAI	ACCTGC	1 cut(s)	160
BglI	GCCNNNNNGGC	1 cut(s)	197
BglII	AGATCT	1 cut(s)	1204
BlpI	GCTNAGC	1 cut(s)	728
Bme1390I	CCNGG	2 cut(s)	832, 1573
Bme18I	GGWCC	1 cut(s)	194
BmeT110I	CYCGRG	2 cut(s)	85, 508
BmgBI	CACGTC	1 cut(s)	891
BmgT120I	GGNCC	1 cut(s)	194
BmiI	GGNNCC	2 cut(s)	1051, 1348
BmrFI	CCNGG	2 cut(s)	832, 1573
BmrI	ACTGGG	1 cut(s)	685
BmsI	GCATC	3 cut(s)	864, 1423, 1435
BmtI	GCTAGC	1 cut(s)	281
BmuI	ACTGGG	1 cut(s)	685
BpmI	CTGGAG	1 cut(s)	1594
Bpu1102I	GCTNAGC	1 cut(s)	728
BpuEI	CTTGAG	1 cut(s)	293
BpuMI	CCSGG	1 cut(s)	832
BsaAI	YACGTR	2 cut(s)	801, 816
BsaHI	GRCGYC	1 cut(s)	863
BsaJI	CCNNGG	2 cut(s)	262, 459
BsaWI	WCCGGW	1 cut(s)	1262
BsaXI	ACNNNNNCTCC	2 cut(s)	1495, 1525
Bsc4I	CCNNNNNNNGG	2 cut(s)	439, 460
Bse118I	RCCGGY	1 cut(s)	191
Bse1I	ACTGG	1 cut(s)	680
Bse3DI	GCAATG	1 cut(s)	1045
BseBI	CCWGG	1 cut(s)	1573
BseDI	CCNNGG	2 cut(s)	262, 459
BseGI	GGATG	6 cut(s)	50, 59, 426, 989, 1289, 1552
BseLI	CCNNNNNNNGG	2 cut(s)	439, 460
BseMI	GCAATG	1 cut(s)	1045
BseMII	CTCAG	6 cut(s)	87, 489, 742, 930, 1014, 1215
BseNI	ACTGG	1 cut(s)	680
BseRI	GAGGAG	3 cut(s)	443, 1223, 1226
BseSI	GKGCMC	1 cut(s)	1351
BseXI	GCAGC	9 cut(s)	151, 271, 508, 1006, 1028, 1136, 1180, 1448, 1606
BsgI	GTGCAG	1 cut(s)	811
Bsh1236I	CGCG	3 cut(s)	716, 1596, 1615
BshFI	GGCC	7 cut(s)	130, 258, 327, 546, 683, 1190, 1628
BshNI	GGYRCC	1 cut(s)	1346
BsiHKAI	GWGCWC	2 cut(s)	385, 729
BsiHKCI	CYCGRG	2 cut(s)	85, 508
BsiSI	CCGG	6 cut(s)	192, 197, 255, 831, 1053, 1263
BslFI	GGGAC	1 cut(s)	490
BslI	CCNNNNNNNGG	2 cut(s)	439, 460
BsmAI	GTCTC	4 cut(s)	149, 350, 881, 1204
BsmBI	CGTCTC	3 cut(s)	149, 350, 881
BsmFI	GGGAC	1 cut(s)	490
BsnI	GGCC	7 cut(s)	130, 258, 327, 546, 683, 1190, 1628
BsoBI	CYCGRG	2 cut(s)	85, 508
Bsp1286I	GDGCHC	3 cut(s)	385, 729, 1351
Bsp1407I	TGTACA	1 cut(s)	687
Bsp1720I	GCTNAGC	1 cut(s)	728
BspANI	GGCC	7 cut(s)	130, 258, 327, 546, 683, 1190, 1628
BspCNI	CTCAG	6 cut(s)	88, 488, 741, 931, 1013, 1214
BspFNI	CGCG	3 cut(s)	716, 1596, 1615
BspHI	TCATGA	1 cut(s)	993
BspLI	GGNNCC	2 cut(s)	1051, 1348
BspMAI	CTGCAG	1 cut(s)	871
BspMI	ACCTGC	1 cut(s)	160
BspOI	GCTAGC	1 cut(s)	281
BspPI	GGATC	6 cut(s)	170, 544, 580, 752, 1403, 1434
BspT107I	GGYRCC	1 cut(s)	1346
BsrBI	CCGCTC	1 cut(s)	807
BsrDI	GCAATG	1 cut(s)	1045
BsrFI	RCCGGY	1 cut(s)	191
BsrGI	TGTACA	1 cut(s)	687
BsrI	ACTGG	1 cut(s)	680
BssAI	RCCGGY	1 cut(s)	191
BssECI	CCNNGG	2 cut(s)	262, 459
BssNAI	GTATAC	1 cut(s)	769
BssNI	GRCGYC	1 cut(s)	863
BssT1I	CCWWGG	2 cut(s)	262, 459
Bst1107I	GTATAC	1 cut(s)	769
Bst2UI	CCWGG	1 cut(s)	1573
Bst4CI	ACNGT	3 cut(s)	751, 1132, 1511
Bst6I	CTCTTC	1 cut(s)	1221
BstACI	GRCGYC	1 cut(s)	863
BstAPI	GCANNNNNTGC	1 cut(s)	1445
BstAUI	TGTACA	1 cut(s)	687
BstBAI	YACGTR	2 cut(s)	801, 816
BstC8I	GCNNGC	8 cut(s)	279, 794, 822, 918, 922, 926, 1290, 1617
BstDEI	CTNAG	7 cut(s)	96, 475, 728, 939, 1000, 1201, 1380
BstF5I	GGATG	6 cut(s)	50, 59, 426, 989, 1289, 1552
BstFNI	CGCG	3 cut(s)	716, 1596, 1615
BstH2I	RGCGCY	1 cut(s)	1380
BstHHI	GCGC	3 cut(s)	716, 760, 1379
BstMAI	GTCTC	4 cut(s)	149, 350, 881, 1204
BstMWI	GCNNNNNNNGC	9 cut(s)	136, 197, 380, 524, 527, 789, 1298, 1445, 1625
BstNI	CCWGG	1 cut(s)	1573
BstSCI	CCNGG	2 cut(s)	830, 1571
BstSFI	CTRYAG	1 cut(s)	867
BstSLI	GKGCMC	1 cut(s)	1351
BstUI	CGCG	3 cut(s)	716, 1596, 1615
BstV1I	GCAGC	9 cut(s)	151, 271, 508, 1006, 1028, 1136, 1180, 1448, 1606
BstX2I	RGATCY	2 cut(s)	1204, 1395
BstYI	RGATCY	2 cut(s)	1204, 1395
BstZ17I	GTATAC	1 cut(s)	769
BsuRI	GGCC	7 cut(s)	130, 258, 327, 546, 683, 1190, 1628
BtgZI	GCGATG	1 cut(s)	1105
BtrI	CACGTC	1 cut(s)	891
BtsCI	GGATG	6 cut(s)	50, 59, 426, 989, 1289, 1552
BtsI	GCAGTG	3 cut(s)	207, 648, 876
BtsIMutI	CAGTG	5 cut(s)	93, 207, 648, 747, 876
BveI	ACCTGC	1 cut(s)	160
Cac8I	GCNNGC	8 cut(s)	279, 794, 822, 918, 922, 926, 1290, 1617
CaiI	CAGNNNCTG	1 cut(s)	907
CciI	TCATGA	1 cut(s)	993
CfoI	GCGC	3 cut(s)	716, 760, 1379
Cfr10I	RCCGGY	1 cut(s)	191
Cfr13I	GGNCC	1 cut(s)	194
CpoI	CGGWCCG	1 cut(s)	194
CseI	GACGC	5 cut(s)	131, 367, 705, 852, 1585
Csp6I	GTAC	4 cut(s)	391, 656, 688, 1337
CspI	CGGWCCG	1 cut(s)	194
CviAII	CATG	6 cut(s)	77, 214, 235, 331, 340, 994
CviQI	GTAC	4 cut(s)	391, 656, 688, 1337
DdeI	CTNAG	7 cut(s)	96, 475, 728, 939, 1000, 1201, 1380
DraIII	CACNNNGTG	1 cut(s)	1346
EaeI	YGGCCR	3 cut(s)	256, 681, 1188
Eam1104I	CTCTTC	1 cut(s)	1221
EarI	CTCTTC	1 cut(s)	1221
EciI	GGCGGA	1 cut(s)	1490
Ecl136II	GAGCTC	1 cut(s)	383
Eco130I	CCWWGG	2 cut(s)	262, 459
Eco147I	AGGCCT	1 cut(s)	1628
Eco24I	GRGCYC	1 cut(s)	385
Eco32I	GATATC	1 cut(s)	1517
Eco47I	GGWCC	1 cut(s)	194
Eco53kI	GAGCTC	1 cut(s)	383
Eco72I	CACGTG	1 cut(s)	801
Eco88I	CYCGRG	2 cut(s)	85, 508
EcoICRI	GAGCTC	1 cut(s)	383
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	1 cut(s)	1571
EcoRV	GATATC	1 cut(s)	1517
EcoT14I	CCWWGG	2 cut(s)	262, 459
EcoT38I	GRGCYC	1 cut(s)	385
ErhI	CCWWGG	2 cut(s)	262, 459
Esp3I	CGTCTC	3 cut(s)	149, 350, 881
FaeI	CATG	6 cut(s)	80, 217, 238, 334, 343, 997
FaqI	GGGAC	1 cut(s)	490
FatI	CATG	6 cut(s)	76, 213, 234, 330, 339, 993
FauI	CCCGC	1 cut(s)	1608
FauNDI	CATATG	1 cut(s)	376
FbaI	TGATCA	1 cut(s)	216
FblI	GTMKAC	4 cut(s)	210, 465, 540, 768
FokI	GGATG	6 cut(s)	37, 46, 413, 996, 1296, 1559
FriOI	GRGCYC	1 cut(s)	385
FspBI	CTAG	5 cut(s)	278, 401, 650, 1601, 1654
GlaI	GCGC	3 cut(s)	715, 759, 1378
GsuI	CTGGAG	1 cut(s)	1594
HaeII	RGCGCY	1 cut(s)	1380
HaeIII	GGCC	7 cut(s)	130, 258, 327, 546, 683, 1190, 1628
HapII	CCGG	6 cut(s)	192, 197, 255, 831, 1053, 1263
HgaI	GACGC	5 cut(s)	131, 367, 705, 852, 1585
HhaI	GCGC	3 cut(s)	716, 760, 1379
Hin1I	GRCGYC	1 cut(s)	863
Hin1II	CATG	6 cut(s)	80, 217, 238, 334, 343, 997
Hin6I	GCGC	3 cut(s)	714, 758, 1377
HinP1I	GCGC	3 cut(s)	714, 758, 1377
HincII	GTYRAC	3 cut(s)	577, 673, 1561
HindII	GTYRAC	3 cut(s)	577, 673, 1561
HindIII	AAGCTT	1 cut(s)	1290
HinfI	GANTC	9 cut(s)	167, 306, 503, 513, 619, 843, 904, 953, 1638
HpaI	GTTAAC	1 cut(s)	673
HpaII	CCGG	6 cut(s)	192, 197, 255, 831, 1053, 1263
HphI	GGTGA	6 cut(s)	448, 820, 1102, 1190, 1219, 1574
Hpy188I	TCNGA	7 cut(s)	118, 296, 478, 903, 1204, 1390, 1456
Hpy99I	CGWCG	2 cut(s)	721, 1559
HpyAV	CCTTC	7 cut(s)	47, 1114, 1177, 1361, 1494, 1639, 1639
HpyCH4III	ACNGT	3 cut(s)	751, 1132, 1511
HpyCH4IV	ACGT	7 cut(s)	225, 437, 537, 800, 815, 890, 1467
HpyCH4V	TGCA	8 cut(s)	139, 629, 792, 869, 969, 1016, 1022, 1436
HpyF10VI	GCNNNNNNNGC	9 cut(s)	136, 197, 380, 524, 527, 789, 1298, 1445, 1625
HpyF3I	CTNAG	7 cut(s)	96, 475, 728, 939, 1000, 1201, 1380
HpySE526I	ACGT	7 cut(s)	225, 437, 537, 800, 815, 890, 1467
Hsp92I	GRCGYC	1 cut(s)	863
Hsp92II	CATG	6 cut(s)	80, 217, 238, 334, 343, 997
HspAI	GCGC	3 cut(s)	714, 758, 1377
Ksp22I	TGATCA	1 cut(s)	216
KspAI	GTTAAC	1 cut(s)	673
LmnI	GCTCC	4 cut(s)	180, 380, 804, 1049
Lsp1109I	GCAGC	9 cut(s)	151, 271, 508, 1006, 1028, 1136, 1180, 1448, 1606
LweI	GCATC	3 cut(s)	864, 1423, 1435
MaeI	CTAG	5 cut(s)	278, 401, 650, 1601, 1654
MaeII	ACGT	7 cut(s)	225, 437, 537, 800, 815, 890, 1467
MaeIII	GTNAC	4 cut(s)	616, 643, 1090, 1606
MbiI	CCGCTC	1 cut(s)	807
MboII	GAAGA	6 cut(s)	175, 241, 463, 838, 1208, 1454
MflI	RGATCY	2 cut(s)	1204, 1395
MhlI	GDGCHC	3 cut(s)	385, 729, 1351
MluCI	AATT	3 cut(s)	593, 851, 1245
MlyI	GAGTC	4 cut(s)	176, 512, 613, 947
MmeI	TCCRAC	3 cut(s)	141, 1312, 1463
MseI	TTAA	3 cut(s)	65, 672, 1010
MslI	CAYNNNNRTG	2 cut(s)	752, 1088
MspA1I	CMGCKG	4 cut(s)	284, 521, 1019, 1193
MspI	CCGG	6 cut(s)	192, 197, 255, 831, 1053, 1263
MspR9I	CCNGG	2 cut(s)	832, 1573
MvaI	CCWGG	1 cut(s)	1573
MvnI	CGCG	3 cut(s)	716, 1596, 1615
MwoI	GCNNNNNNNGC	9 cut(s)	136, 197, 380, 524, 527, 789, 1298, 1445, 1625
NciI	CCSGG	1 cut(s)	832
NdeI	CATATG	1 cut(s)	376
NheI	GCTAGC	1 cut(s)	277
NlaIII	CATG	6 cut(s)	80, 217, 238, 334, 343, 997
NlaIV	GGNNCC	2 cut(s)	1051, 1348
NmeAIII	GCCGAG	1 cut(s)	477
NmuCI	GTSAC	3 cut(s)	616, 643, 1090
OliI	CACNNNNGTG	1 cut(s)	752
PaeR7I	CTCGAG	1 cut(s)	85
PagI	TCATGA	1 cut(s)	993
PceI	AGGCCT	1 cut(s)	1628
PcsI	WCGNNNNNNNCGW	4 cut(s)	780, 821, 968, 1563
PfeI	GAWTC	5 cut(s)	306, 513, 843, 904, 1638
PleI	GAGTC	4 cut(s)	175, 511, 613, 947
PmaCI	CACGTG	1 cut(s)	801
PmlI	CACGTG	1 cut(s)	801
PpsI	GAGTC	4 cut(s)	175, 511, 613, 947
Ppu21I	YACGTR	2 cut(s)	801, 816
Psp124BI	GAGCTC	1 cut(s)	385
Psp1406I	AACGTT	1 cut(s)	437
Psp6I	CCWGG	1 cut(s)	1571
PspCI	CACGTG	1 cut(s)	801
PspGI	CCWGG	1 cut(s)	1571
PspN4I	GGNNCC	2 cut(s)	1051, 1348
PspPI	GGNCC	1 cut(s)	194
PspXI	VCTCGAGB	1 cut(s)	85
PstI	CTGCAG	1 cut(s)	871
PstNI	CAGNNNCTG	1 cut(s)	907
PsuI	RGATCY	2 cut(s)	1204, 1395
PvuII	CAGCTG	1 cut(s)	1019
RsaI	GTAC	4 cut(s)	392, 657, 689, 1338
RsaNI	GTAC	4 cut(s)	391, 656, 688, 1337
RseI	CAYNNNNRTG	2 cut(s)	752, 1088
Rsr2I	CGGWCCG	1 cut(s)	194
RsrII	CGGWCCG	1 cut(s)	194
SacI	GAGCTC	1 cut(s)	385
SaqAI	TTAA	3 cut(s)	65, 672, 1010
Sau96I	GGNCC	1 cut(s)	194
SchI	GAGTC	4 cut(s)	176, 512, 613, 947
ScrFI	CCNGG	2 cut(s)	832, 1573
SduI	GDGCHC	3 cut(s)	385, 729, 1351
SfaNI	GCATC	3 cut(s)	864, 1423, 1435
SfcI	CTRYAG	1 cut(s)	867
Sfr274I	CTCGAG	1 cut(s)	85
SinI	GGWCC	1 cut(s)	194
SlaI	CTCGAG	1 cut(s)	85
SmiMI	CAYNNNNRTG	2 cut(s)	752, 1088
SmlI	CTYRAG	2 cut(s)	85, 272
SmoI	CTYRAG	2 cut(s)	85, 272
Sse9I	AATT	3 cut(s)	593, 851, 1245
SseBI	AGGCCT	1 cut(s)	1628
SspI	AATATT	1 cut(s)	111
SspMI	CTAG	5 cut(s)	278, 401, 650, 1601, 1654
SstI	GAGCTC	1 cut(s)	385
StuI	AGGCCT	1 cut(s)	1628
StyD4I	CCNGG	2 cut(s)	830, 1571
StyI	CCWWGG	2 cut(s)	262, 459
TaaI	ACNGT	3 cut(s)	751, 1132, 1511
TaiI	ACGT	7 cut(s)	228, 440, 540, 803, 818, 893, 1470
TaqI	TCGA	9 cut(s)	86, 165, 170, 962, 1400, 1429, 1498, 1566, 1643
TasI	AATT	3 cut(s)	593, 851, 1245
TatI	WGTACW	1 cut(s)	687
TauI	GCSGC	6 cut(s)	284, 521, 527, 530, 1193, 1475
TfiI	GAWTC	5 cut(s)	306, 513, 843, 904, 1638
Tru1I	TTAA	3 cut(s)	65, 672, 1010
Tru9I	TTAA	3 cut(s)	65, 672, 1010
TscAI	CASTG	5 cut(s)	100, 207, 648, 754, 876
TseFI	GTSAC	3 cut(s)	616, 643, 1090
TseI	GCWGC	9 cut(s)	139, 284, 521, 1016, 1019, 1124, 1193, 1436, 1619
Tsp45I	GTSAC	3 cut(s)	616, 643, 1090
TspDTI	ATGAA	3 cut(s)	39, 982, 1096
TspGWI	ACGGA	2 cut(s)	1105, 1187
TspRI	CASTG	5 cut(s)	100, 207, 648, 754, 876
VpaK11BI	GGWCC	1 cut(s)	194
XapI	RAATTY	2 cut(s)	593, 1245
XhoI	CTCGAG	1 cut(s)	85
XmiI	GTMKAC	4 cut(s)	210, 465, 540, 768
XspI	CTAG	5 cut(s)	278, 401, 650, 1601, 1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.