Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001481

Physical Location & Seq

Genomic Coordinates Forward (+)

71629764 .. 71640763

Gene Structure 11000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G044870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGGGTTCTTCCCAAGACGATACTTGCCAACCTCTCCTTCAACCCATTTCATCCCCCCCATCCTTAACAGATAAGCATGACCACTCGAGCAGCACTGAGCTGGAAAGAATATTATCCGATACAGATAGGCCGTTCTTGCAGCGTCTCAAACCTGCTCTATCGATCGAGTCGAAGCTCCTTTTCTTCCTCGCCGGTCCGGCAGTGGTCGTCTACTTGACCAACTACGTTATGTTCATGTCCACCCAAATCTTCTCCGGCCACCTTGGTAATCTTGAGCTCGCCGCTGCTTCTCTCGGAAACAATGGAATCCAAATGTTCGCCTATGGCCTCATGTTAGGCATGGGAAGTGCGGTGGAGACGCTATGTGGACAAGCATATGGAGCTCAAAAGTACGAAATGCTAGGCATATATCTACAAAGATCAACCATCCTCCTAACGTTGGTCGGTTTCCTCCTCACCTTGGTCTACATCTTCTCAGAACCAGCTCTAATCTTTCTCGGCGAGTCCCCGAGAATCGCCTCCGCCGCCGCCATTTACGTCTACGGCCTGATCCCTCAAATCTTTGCCTACGCCGTCAACTTCCCGATCCAGAAATTCCTCCAAGCTCAAAGCATAGTGACTCCAAGTGCATACATATCAGCAGTGACACTAGCCGTACACCTCTTGATGACCTGGGTTGCCGTGTACAAGATTGGGCTTGGGCTTCTGGGCGCGTCGCTGGTGCTCAGCCTGTCGTGGTGGATCACTGTGGTGGCGCAGTTTGTATACATCGTGAAAAGCGAGAGATGCAGGCACACGTGGAGCGGTTTTACGTGGCAAGCGTTCAGCGGGTTGTATGGATTCTTCAAATTATCGGTGGCGTCTGCAGTGATGCTTTGTTTAGAGACGTGGTATTTTCAGATTCTGGTTCTGCTGGCTGGCTTGCTGGAAAATCCTGAGTTGGCTCTTGACTCGCTCTCGATTTGCACGACTATATCAGAATGGGTGTTCATGATCTCAATCGGGTTAAATGCAGCTGCAAGTGTGCGAGTAAGCAATGAGCTTGGAGCCGGAAATCCCAAGTCCACAGCATTTTCTGTCATCGTGGTGACTACGATCTCCTTCATCATCTCCGTCATCGCAGCAATAGTTGTTCTTATTTTTTGTGATGTTATCAGCTACGCCTTCACGGAGGGTGAAGTCGTGGCCGCTGCTGTCTCAGATCTTACCCCTCTTCTTGCCCTCACCCTCCTCCTCAATGGAATTCAGCCAGTATTGTCCGGTGTTGCTGTTGGGTGTGGATGGCAAGCTTTTGTGGCGTATGTAAATGTGGGCTGTTATTACTTTGTTGGAGTACCACTTGGTGCCCTTCTTGGATTTTACTTCAACTTTGGCGCTAAGGGAATATGGTTAGGGATGATGGCGGGCACGTTGATGCAAACAAGCATTCTAATATGGATCACTGTTCGAACAGACTGGAAGAAGGAGGTGGAAGAGGCAGCCAAAAGGTTGAACAAGTGGGACGTGAAGGAACCCGTAAAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0016020 GO:0022857 GO:0031090 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

508

Amino Acids

55.22

Weight (kDa)

5.62

Isoelectric Point (pI)

24.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	66 - 226	1.8e-34	MatE
MatE	PF01554	288 - 449	4.1e-30	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21690
fragaria_vesca	FvH4_3g02250 FvH4_3g02250 FvH4_6g43220 FvH4_6g43220
malus_domestica	MD05G1344500.v1.1 MD05G1344900.v1.1 MD09G1108500.v1.1 MD17G1096400.v1.1
prunus_persica	Prupe.3G217600_v2.0.a1 Prupe.3G217600_v2.0.a1 Prupe.3G217600_v2.0.a1 Prupe.4G021900_v2.0.a1
pyrus_communis	pycom05g31380 pycom09g03100 pycom17g09250
rosa_chinensis	RchiOBHm_Chr2g0159351 RchiOBHm_Chr2g0159471 RchiOBHm_Chr5g0003321 RchiOBHm_Chr5g0003371
rosa_laevigata	RLG00000021157 RLG00000021161 RLG00000031126 RLG00000031130
rosa_multiflora	Rmu_sc0004800.1_g000007 Rmu_sc0006842.1_g000002 Rmu_sc0007710.1_g000003 Rmu_sc0010917.1_g000005
rosa_roxburghii	Rroxscaffold_1G00072650
rosa_rugosa	Rorug02G0475900 Rorug02G0476200 Rorug02G0476300 Rorug02G0476500 Rorug02G0476600 Rorug02G0476700 Rorug04G0402700.1 Rorug04G0402800
rosa_samantha	Rh2AG542800 Rh2AG543100 Rh2BG555300 Rh2BG555800 Rh2DG564900 Rh2DG565200 Rh5AG028800 Rh5BG028900 Rh5DG029400
rosa_wichuraiana	Rw2G044870 Rw2G044920 Rw5G002370 Rw5G002680 Rw5G002730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	160
AccB1I	GGYRCC	1 cut(s)	1343
AccBSI	CCGCTC	1 cut(s)	804
AccI	GTMKAC	4 cut(s)	210, 465, 540, 765
AccII	CGCG	1 cut(s)	713
AciI	CCGC	9 cut(s)	282, 350, 522, 525, 528, 804, 828, 1188, 1403
AclI	AACGTT	1 cut(s)	437
AclWI	GGATC	4 cut(s)	544, 580, 749, 1445
AcoI	YGGCCR	2 cut(s)	256, 1185
AcsI	RAATTY	2 cut(s)	593, 1242
AcvI	CACGTG	1 cut(s)	798
AcyI	GRCGYC	1 cut(s)	860
AdeI	CACNNNGTG	1 cut(s)	1343
AfaI	GTAC	4 cut(s)	392, 657, 686, 1335
AfiI	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
AflIII	ACRYGT	1 cut(s)	795
AgsI	TTSAA	4 cut(s)	41, 847, 1366, 1492
AjiI	CACGTC	2 cut(s)	888, 1504
AjnI	CCWGG	1 cut(s)	671
AjuI	GAANNNNNNNTTGG	2 cut(s)	21, 53
AleI	CACNNNNGTG	1 cut(s)	749
Alw21I	GWGCWC	3 cut(s)	279, 385, 726
Alw26I	GTCTC	4 cut(s)	149, 350, 878, 1201
AlwI	GGATC	4 cut(s)	544, 580, 749, 1445
AlwNI	CAGNNNCTG	1 cut(s)	904
Ama87I	CYCGRG	2 cut(s)	85, 508
AoxI	GGCC	5 cut(s)	128, 256, 325, 544, 1185
ApeKI	GCWGC	8 cut(s)	90, 139, 284, 1013, 1016, 1121, 1190, 1478
ApoI	RAATTY	2 cut(s)	593, 1242
AspLEI	GCGC	3 cut(s)	713, 757, 1376
AspS9I	GGNCC	1 cut(s)	194
AsuHPI	GGTGA	4 cut(s)	448, 1099, 1187, 1216
AsuII	TTCGAA	1 cut(s)	1447
AvaI	CYCGRG	2 cut(s)	85, 508
AvaII	GGWCC	1 cut(s)	194
BaeGI	GKGCMC	2 cut(s)	1348, 1409
BanI	GGYRCC	1 cut(s)	1343
BanII	GRGCYC	2 cut(s)	279, 385
BarI	GAAGNNNNNNTAC	2 cut(s)	827, 859
BbrPI	CACGTG	1 cut(s)	798
Bbv12I	GWGCWC	3 cut(s)	279, 385, 726
BbvI	GCAGC	8 cut(s)	102, 151, 271, 1003, 1025, 1133, 1177, 1490
BccI	CCATC	4 cut(s)	67, 434, 1275, 1393
BceAI	ACGGC	5 cut(s)	115, 557, 559, 638, 665
BciT130I	CCWGG	1 cut(s)	673
BcoDI	GTCTC	4 cut(s)	149, 350, 878, 1201
BfaI	CTAG	2 cut(s)	401, 650
BfmI	CTRYAG	1 cut(s)	864
BfoI	RGCGCY	1 cut(s)	1377
BfuAI	ACCTGC	1 cut(s)	160
BglI	GCCNNNNNGGC	1 cut(s)	197
BglII	AGATCT	1 cut(s)	1201
BlpI	GCTNAGC	1 cut(s)	725
Bme1390I	CCNGG	1 cut(s)	673
Bme18I	GGWCC	1 cut(s)	194
BmeT110I	CYCGRG	2 cut(s)	85, 508
BmgBI	CACGTC	2 cut(s)	888, 1504
BmgT120I	GGNCC	1 cut(s)	194
BmiI	GGNNCC	3 cut(s)	1048, 1345, 1512
BmrFI	CCNGG	1 cut(s)	673
BmsI	GCATC	3 cut(s)	776, 861, 1404
Bpu10I	CCTNAGC	1 cut(s)	1377
Bpu1102I	GCTNAGC	1 cut(s)	725
Bpu14I	TTCGAA	1 cut(s)	1447
BpuEI	CTTGAG	1 cut(s)	293
Bsa29I	ATCGAT	1 cut(s)	161
BsaAI	YACGTR	2 cut(s)	798, 813
BsaBI	GATNNNNATC	1 cut(s)	998
BsaHI	GRCGYC	1 cut(s)	860
BsaJI	CCNNGG	3 cut(s)	262, 459, 672
BsaWI	WCCGGW	1 cut(s)	1259
Bsc4I	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
Bse118I	RCCGGY	1 cut(s)	191
Bse1I	ACTGG	2 cut(s)	1250, 1460
Bse3DI	GCAATG	1 cut(s)	1042
Bse8I	GATNNNNATC	1 cut(s)	998
BseBI	CCWGG	1 cut(s)	673
BseCI	ATCGAT	1 cut(s)	161
BseDI	CCNNGG	3 cut(s)	262, 459, 672
BseGI	GGATG	5 cut(s)	50, 59, 426, 1286, 1401
BseJI	GATNNNNATC	1 cut(s)	998
BseLI	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
BseMI	GCAATG	1 cut(s)	1042
BseMII	CTCAG	5 cut(s)	87, 489, 739, 927, 1212
BseNI	ACTGG	2 cut(s)	1250, 1460
BseRI	GAGGAG	3 cut(s)	443, 1220, 1223
BseSI	GKGCMC	2 cut(s)	1348, 1409
BseXI	GCAGC	8 cut(s)	102, 151, 271, 1003, 1025, 1133, 1177, 1490
Bsh1236I	CGCG	1 cut(s)	713
Bsh1285I	CGRYCG	1 cut(s)	165
BshFI	GGCC	5 cut(s)	130, 258, 327, 546, 1187
BshNI	GGYRCC	1 cut(s)	1343
BshVI	ATCGAT	1 cut(s)	161
BsiEI	CGRYCG	1 cut(s)	165
BsiHKAI	GWGCWC	3 cut(s)	279, 385, 726
BsiHKCI	CYCGRG	2 cut(s)	85, 508
BsiSI	CCGG	5 cut(s)	192, 197, 255, 1050, 1260
BslFI	GGGAC	2 cut(s)	490, 1514
BslI	CCNNNNNNNGG	3 cut(s)	439, 460, 1520
BsmAI	GTCTC	4 cut(s)	149, 350, 878, 1201
BsmBI	CGTCTC	3 cut(s)	149, 350, 878
BsmFI	GGGAC	2 cut(s)	490, 1514
BsmI	GAATGC	1 cut(s)	1425
BsnI	GGCC	5 cut(s)	130, 258, 327, 546, 1187
BsoBI	CYCGRG	2 cut(s)	85, 508
Bsp119I	TTCGAA	1 cut(s)	1447
Bsp1286I	GDGCHC	5 cut(s)	279, 385, 726, 1348, 1409
Bsp1407I	TGTACA	1 cut(s)	684
Bsp143I	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
Bsp1720I	GCTNAGC	1 cut(s)	725
BspACI	CCGC	9 cut(s)	282, 350, 522, 525, 528, 804, 828, 1188, 1403
BspANI	GGCC	5 cut(s)	130, 258, 327, 546, 1187
BspCNI	CTCAG	5 cut(s)	88, 488, 738, 928, 1211
BspDI	ATCGAT	1 cut(s)	161
BspFNI	CGCG	1 cut(s)	713
BspHI	TCATGA	1 cut(s)	990
BspLI	GGNNCC	3 cut(s)	1048, 1345, 1512
BspMAI	CTGCAG	1 cut(s)	868
BspMI	ACCTGC	1 cut(s)	160
BspPI	GGATC	4 cut(s)	544, 580, 749, 1445
BspT104I	TTCGAA	1 cut(s)	1447
BspT107I	GGYRCC	1 cut(s)	1343
BsrBI	CCGCTC	1 cut(s)	804
BsrDI	GCAATG	1 cut(s)	1042
BsrFI	RCCGGY	1 cut(s)	191
BsrGI	TGTACA	1 cut(s)	684
BsrI	ACTGG	2 cut(s)	1250, 1460
BssAI	RCCGGY	1 cut(s)	191
BssECI	CCNNGG	3 cut(s)	262, 459, 672
BssMI	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
BssNAI	GTATAC	1 cut(s)	766
BssNI	GRCGYC	1 cut(s)	860
BssT1I	CCWWGG	2 cut(s)	262, 459
Bst1107I	GTATAC	1 cut(s)	766
Bst2UI	CCWGG	1 cut(s)	673
Bst4CI	ACNGT	2 cut(s)	748, 1444
Bst6I	CTCTTC	2 cut(s)	1218, 1467
BstACI	GRCGYC	1 cut(s)	860
BstAUI	TGTACA	1 cut(s)	684
BstBAI	YACGTR	2 cut(s)	798, 813
BstBI	TTCGAA	1 cut(s)	1447
BstC8I	GCNNGC	8 cut(s)	279, 791, 819, 915, 919, 923, 1287, 1405
BstDEI	CTNAG	6 cut(s)	96, 475, 725, 936, 1198, 1377
BstF5I	GGATG	5 cut(s)	50, 59, 426, 1286, 1401
BstFNI	CGCG	1 cut(s)	713
BstH2I	RGCGCY	1 cut(s)	1377
BstHHI	GCGC	3 cut(s)	713, 757, 1376
BstKTI	GATC	9 cut(s)	165, 422, 552, 588, 744, 996, 1098, 1204, 1440
BstMAI	GTCTC	4 cut(s)	149, 350, 878, 1201
BstMBI	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
BstMCI	CGRYCG	1 cut(s)	165
BstMWI	GCNNNNNNNGC	6 cut(s)	136, 197, 380, 524, 786, 1295
BstNI	CCWGG	1 cut(s)	673
BstSCI	CCNGG	1 cut(s)	671
BstSFI	CTRYAG	1 cut(s)	864
BstSLI	GKGCMC	2 cut(s)	1348, 1409
BstUI	CGCG	1 cut(s)	713
BstV1I	GCAGC	8 cut(s)	102, 151, 271, 1003, 1025, 1133, 1177, 1490
BstX2I	RGATCY	1 cut(s)	1201
BstYI	RGATCY	1 cut(s)	1201
BstZ17I	GTATAC	1 cut(s)	766
Bsu15I	ATCGAT	1 cut(s)	161
BsuRI	GGCC	5 cut(s)	130, 258, 327, 546, 1187
BsuTUI	ATCGAT	1 cut(s)	161
BtgZI	GCGATG	1 cut(s)	1102
BtrI	CACGTC	2 cut(s)	888, 1504
BtsCI	GGATG	5 cut(s)	50, 59, 426, 1286, 1401
BtsI	GCAGTG	3 cut(s)	207, 648, 873
BtsIMutI	CAGTG	6 cut(s)	93, 207, 648, 744, 873, 1440
BveI	ACCTGC	1 cut(s)	160
Cac8I	GCNNGC	8 cut(s)	279, 791, 819, 915, 919, 923, 1287, 1405
CaiI	CAGNNNCTG	1 cut(s)	904
CciI	TCATGA	1 cut(s)	990
CfoI	GCGC	3 cut(s)	713, 757, 1376
Cfr10I	RCCGGY	1 cut(s)	191
Cfr13I	GGNCC	1 cut(s)	194
ClaI	ATCGAT	1 cut(s)	161
CpoI	CGGWCCG	1 cut(s)	194
CseI	GACGC	4 cut(s)	131, 367, 702, 849
Csp6I	GTAC	4 cut(s)	391, 656, 685, 1334
CspI	CGGWCCG	1 cut(s)	194
CviAII	CATG	5 cut(s)	77, 235, 331, 340, 991
CviQI	GTAC	4 cut(s)	391, 656, 685, 1334
DdeI	CTNAG	6 cut(s)	96, 475, 725, 936, 1198, 1377
DpnI	GATC	9 cut(s)	164, 421, 551, 587, 743, 995, 1097, 1203, 1439
DpnII	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
DraIII	CACNNNGTG	1 cut(s)	1343
EaeI	YGGCCR	2 cut(s)	256, 1185
Eam1104I	CTCTTC	2 cut(s)	1218, 1467
EarI	CTCTTC	2 cut(s)	1218, 1467
EciI	GGCGGA	1 cut(s)	511
Ecl136II	GAGCTC	2 cut(s)	277, 383
Eco130I	CCWWGG	2 cut(s)	262, 459
Eco24I	GRGCYC	2 cut(s)	279, 385
Eco47I	GGWCC	1 cut(s)	194
Eco53kI	GAGCTC	2 cut(s)	277, 383
Eco72I	CACGTG	1 cut(s)	798
Eco88I	CYCGRG	2 cut(s)	85, 508
EcoICRI	GAGCTC	2 cut(s)	277, 383
EcoRI	GAATTC	1 cut(s)	1242
EcoRII	CCWGG	1 cut(s)	671
EcoT14I	CCWWGG	2 cut(s)	262, 459
EcoT38I	GRGCYC	2 cut(s)	279, 385
ErhI	CCWWGG	2 cut(s)	262, 459
Esp3I	CGTCTC	3 cut(s)	149, 350, 878
FaeI	CATG	5 cut(s)	80, 238, 334, 343, 994
FaqI	GGGAC	2 cut(s)	490, 1514
FatI	CATG	5 cut(s)	76, 234, 330, 339, 990
FauI	CCCGC	2 cut(s)	821, 1396
FauNDI	CATATG	1 cut(s)	376
FblI	GTMKAC	4 cut(s)	210, 465, 540, 765
FokI	GGATG	5 cut(s)	37, 46, 413, 1293, 1408
FriOI	GRGCYC	2 cut(s)	279, 385
FspBI	CTAG	2 cut(s)	401, 650
GlaI	GCGC	3 cut(s)	712, 756, 1375
HaeII	RGCGCY	1 cut(s)	1377
HaeIII	GGCC	5 cut(s)	130, 258, 327, 546, 1187
HapII	CCGG	5 cut(s)	192, 197, 255, 1050, 1260
HgaI	GACGC	4 cut(s)	131, 367, 702, 849
HhaI	GCGC	3 cut(s)	713, 757, 1376
Hin1I	GRCGYC	1 cut(s)	860
Hin1II	CATG	5 cut(s)	80, 238, 334, 343, 994
Hin6I	GCGC	3 cut(s)	711, 755, 1374
HinP1I	GCGC	3 cut(s)	711, 755, 1374
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HindIII	AAGCTT	1 cut(s)	1287
HinfI	GANTC	8 cut(s)	167, 306, 503, 513, 619, 840, 901, 950
HpaII	CCGG	5 cut(s)	192, 197, 255, 1050, 1260
HphI	GGTGA	4 cut(s)	448, 1099, 1187, 1216
Hpy188I	TCNGA	6 cut(s)	118, 296, 478, 900, 979, 1201
Hpy188III	TCNNGA	9 cut(s)	272, 583, 589, 664, 772, 935, 947, 958, 991
Hpy99I	CGWCG	1 cut(s)	718
HpyAV	CCTTC	6 cut(s)	47, 1111, 1174, 1358, 1456, 1501
HpyCH4III	ACNGT	2 cut(s)	748, 1444
HpyCH4IV	ACGT	8 cut(s)	225, 437, 537, 797, 812, 887, 1409, 1503
HpyCH4V	TGCA	8 cut(s)	139, 629, 789, 866, 966, 1013, 1019, 1417
HpyF10VI	GCNNNNNNNGC	6 cut(s)	136, 197, 380, 524, 786, 1295
HpyF3I	CTNAG	6 cut(s)	96, 475, 725, 936, 1198, 1377
HpySE526I	ACGT	8 cut(s)	225, 437, 537, 797, 812, 887, 1409, 1503
Hsp92I	GRCGYC	1 cut(s)	860
Hsp92II	CATG	5 cut(s)	80, 238, 334, 343, 994
HspAI	GCGC	3 cut(s)	711, 755, 1374
Kzo9I	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
LmnI	GCTCC	4 cut(s)	180, 380, 801, 1046
Lsp1109I	GCAGC	8 cut(s)	102, 151, 271, 1003, 1025, 1133, 1177, 1490
LweI	GCATC	3 cut(s)	776, 861, 1404
MaeI	CTAG	2 cut(s)	401, 650
MaeII	ACGT	8 cut(s)	225, 437, 537, 797, 812, 887, 1409, 1503
MaeIII	GTNAC	3 cut(s)	616, 643, 1087
MalI	GATC	9 cut(s)	164, 421, 551, 587, 743, 995, 1097, 1203, 1439
MbiI	CCGCTC	1 cut(s)	804
MboI	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
MboII	GAAGA	7 cut(s)	175, 241, 463, 835, 1205, 1471, 1484
MflI	RGATCY	1 cut(s)	1201
MhlI	GDGCHC	5 cut(s)	279, 385, 726, 1348, 1409
MluCI	AATT	3 cut(s)	593, 848, 1242
MlyI	GAGTC	4 cut(s)	176, 512, 613, 944
MmeI	TCCRAC	1 cut(s)	1309
MseI	TTAA	2 cut(s)	65, 1007
MslI	CAYNNNNRTG	3 cut(s)	749, 1085, 1412
MspA1I	CMGCKG	4 cut(s)	284, 828, 1016, 1190
MspI	CCGG	5 cut(s)	192, 197, 255, 1050, 1260
MspR9I	CCNGG	1 cut(s)	673
Mva1269I	GAATGC	1 cut(s)	1425
MvaI	CCWGG	1 cut(s)	673
MvnI	CGCG	1 cut(s)	713
MwoI	GCNNNNNNNGC	6 cut(s)	136, 197, 380, 524, 786, 1295
NdeI	CATATG	1 cut(s)	376
NdeII	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
NlaIII	CATG	5 cut(s)	80, 238, 334, 343, 994
NlaIV	GGNNCC	3 cut(s)	1048, 1345, 1512
NmeAIII	GCCGAG	1 cut(s)	477
NmuCI	GTSAC	3 cut(s)	616, 643, 1087
NspV	TTCGAA	1 cut(s)	1447
OliI	CACNNNNGTG	1 cut(s)	749
PaeR7I	CTCGAG	1 cut(s)	85
PagI	TCATGA	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	4 cut(s)	167, 777, 818, 965
PctI	GAATGC	1 cut(s)	1425
PfeI	GAWTC	4 cut(s)	306, 513, 840, 901
Ple19I	CGATCG	1 cut(s)	165
PleI	GAGTC	4 cut(s)	175, 511, 613, 944
PmaCI	CACGTG	1 cut(s)	798
PmlI	CACGTG	1 cut(s)	798
PpsI	GAGTC	4 cut(s)	175, 511, 613, 944
Ppu21I	YACGTR	2 cut(s)	798, 813
Psp124BI	GAGCTC	2 cut(s)	279, 385
Psp1406I	AACGTT	1 cut(s)	437
Psp6I	CCWGG	1 cut(s)	671
PspCI	CACGTG	1 cut(s)	798
PspGI	CCWGG	1 cut(s)	671
PspN4I	GGNNCC	3 cut(s)	1048, 1345, 1512
PspPI	GGNCC	1 cut(s)	194
PspXI	VCTCGAGB	1 cut(s)	85
PstI	CTGCAG	1 cut(s)	868
PstNI	CAGNNNCTG	1 cut(s)	904
PsuI	RGATCY	1 cut(s)	1201
PvuI	CGATCG	1 cut(s)	165
PvuII	CAGCTG	1 cut(s)	1016
RsaI	GTAC	4 cut(s)	392, 657, 686, 1335
RsaNI	GTAC	4 cut(s)	391, 656, 685, 1334
RseI	CAYNNNNRTG	3 cut(s)	749, 1085, 1412
Rsr2I	CGGWCCG	1 cut(s)	194
RsrII	CGGWCCG	1 cut(s)	194
SacI	GAGCTC	2 cut(s)	279, 385
SaqAI	TTAA	2 cut(s)	65, 1007
Sau3AI	GATC	9 cut(s)	162, 419, 549, 585, 741, 993, 1095, 1201, 1437
Sau96I	GGNCC	1 cut(s)	194
SchI	GAGTC	4 cut(s)	176, 512, 613, 944
ScrFI	CCNGG	1 cut(s)	673
SduI	GDGCHC	5 cut(s)	279, 385, 726, 1348, 1409
SfaNI	GCATC	3 cut(s)	776, 861, 1404
SfcI	CTRYAG	1 cut(s)	864
Sfr274I	CTCGAG	1 cut(s)	85
SfuI	TTCGAA	1 cut(s)	1447
SinI	GGWCC	1 cut(s)	194
SlaI	CTCGAG	1 cut(s)	85
SmiMI	CAYNNNNRTG	3 cut(s)	749, 1085, 1412
SmlI	CTYRAG	2 cut(s)	85, 272
SmoI	CTYRAG	2 cut(s)	85, 272
Sse9I	AATT	3 cut(s)	593, 848, 1242
SsiI	CCGC	9 cut(s)	282, 350, 522, 525, 528, 804, 828, 1188, 1403
SspI	AATATT	1 cut(s)	111
SspMI	CTAG	2 cut(s)	401, 650
SstI	GAGCTC	2 cut(s)	279, 385
StyD4I	CCNGG	1 cut(s)	671
StyI	CCWWGG	2 cut(s)	262, 459
TaaI	ACNGT	2 cut(s)	748, 1444
TaiI	ACGT	8 cut(s)	228, 440, 540, 800, 815, 890, 1412, 1506
TaqI	TCGA	6 cut(s)	86, 161, 165, 170, 959, 1447
TasI	AATT	3 cut(s)	593, 848, 1242
TatI	WGTACW	1 cut(s)	684
TauI	GCSGC	4 cut(s)	284, 527, 530, 1190
TfiI	GAWTC	4 cut(s)	306, 513, 840, 901
Tru1I	TTAA	2 cut(s)	65, 1007
Tru9I	TTAA	2 cut(s)	65, 1007
TscAI	CASTG	6 cut(s)	100, 207, 648, 751, 873, 1447
TseFI	GTSAC	3 cut(s)	616, 643, 1087
TseI	GCWGC	8 cut(s)	90, 139, 284, 1013, 1016, 1121, 1190, 1478
Tsp45I	GTSAC	3 cut(s)	616, 643, 1087
TspDTI	ATGAA	4 cut(s)	39, 223, 979, 1093
TspGWI	ACGGA	2 cut(s)	1102, 1184
TspRI	CASTG	6 cut(s)	100, 207, 648, 751, 873, 1447
VpaK11BI	GGWCC	1 cut(s)	194
XapI	RAATTY	2 cut(s)	593, 1242
XhoI	CTCGAG	1 cut(s)	85
XmiI	GTMKAC	4 cut(s)	210, 465, 540, 765
XspI	CTAG	2 cut(s)	401, 650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.