FvH4_3g12502

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000477
Physical Location & Seq
Forward (+)
7453100 .. 7459045
5946 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g12502.t3

Sequence Viewer

Length: 2358 bp
ATGGGTTCCACTAATGAAGAAAATGGTAGCAAAGGTGGAGTGTGGGTTTTGGATCAGCAGCTTGATCAGCCTATGGACGAGGAGGCCAGGAGGCTTAGAAATATGTATCAAGAAAAGAAATTTTCGACAGCAATTCTCCTGCAGCTTGCATTTCAAAGCCTTGGTGTGGTCTATGGAGATCTAGGGACATCTCCTTTGTATGTCTTCTACAATACATTTCCTAATGGAATTGGTGACCCGGAGGATTTACTTGGAGCCTTGTCTGTCATTATATATTCCCTCACTCTTATTCCACTTATGAAGTATGTATTTATCGTCTGTAGAGCCAATGACAATGGTCAAGGTGGAACATTTGCTCTTTATTCGTTACTCTGTCGACATGCCAAACTAAAGGCTATTCCTAGCCAGGACAGAACAGATGAGGAGCTAACAACTTTTAGCTCTTCTACATTTGGTGAGCGATCATTTGCTGCAAAAACCAAGAGATGGTTGGAGGGACATGCATTTTTGAAGAGCACACTTCTTATTCTTGTGCTGATTGGCTCTTGCATGGTGATTGGGGATGGAATTCTAACTCCAGCCATATCAGTTCTTTCAGCAGTTGGTGGGATCAATGTCCGTCACTCACAGATTAGTAATGAGATAGTTGTGCTTTTTGCTGTTGTTATACTGGTACTTTTGTTTACCATGCAACACCACGGTACAGATAAAGTTGGTTGGCTTTTTGCACCAATTGTACTCCTCTGGTTTCTCTTGATTGGAGGGATTGGCATGTTCAACATTTGGAAATTCGACAGTAGTATTTTAAAAGCTTTTTCACCTTTGTATGTATATCGGTTCTTTAAGAAGGGAGGAAAAGATGGGTGGACATCTCTGGGAGGTATAATGCTCAGTATAACAGGAACAGAAGCACTTTTCGCTGACCTGTCCCATTTCCCAGTCCCGTCAATACAGATTGCTTTCACATGTATTGTATTTCCTTCCCTTCTGTTAGCCTACTCTGGTCAAGCTGCCTACCTCATGAAACATTCTGATCATGTGTACGGTGCTTTTTACCATTCGATTCCAGACAGTATATATTGGCCCGTGTTTGTTGTTGCTACTGCTGCTGCTGTTGTTGCGAGTCAGGCCACCATAACTGCAACTTTTGCATTAGTTAAGCAGGCCCTTGCACTTGGCTGCTTCCCAAGAGTCAAAGTTATACATACATCAAGGAAGTACCGTCACCAGATATATATTCCAGAAGTGAATTGGATTGTTATGGTTCTCTGCATTGCCGTGACGGCTGGGTTTAAAAATCAAAACCAAATCGGGAACGCCTCTGGGACGGCAGTTTGTATAGTTATGTTGGTGACCACATTGCTTATGATTTTAGTCATGATATTAGTGTGGCATTGCCATTGGATTCTCGTCATGGTCTTCACTGGATTATCATTTATAATAGAGGGCACTTACTTTTCTGCTGTACTCCTCAAGGTCAATCAAGGTGGTTGGGTTCCTCTAGTGATATCAGCAGCCTTCTTTATTATTATGTATGGCTGGCAGTATGGTACAGTAAAGCGCTATGAGATTGAGGTTCATAGTAAGGTTTCAATGGCATGGATTCTTGGACTGGGTCCTAGTTTAGGACTGGTTCGGGTACCTGGTGTAGGTCTTGTCTACACTGAGCTAGCAAGTGGAGTTCCCCGTATCTTCTCTCACTTTATCACCAACCTACCCGCCATTCATTCTGTTGTTGTCTTTGTCTGCGTGAAGTACCTTCCTGTCTGTACAGTTCCAGAAGAAGAGCGGTTCCTTGTAAAGCGGATTGGACCCAAGAATTTCCACATGTTCCGTTGTGTTGCCAGATATGGGTATAAAGATCTCCATAGAAAAGACGACAATTTTGAGAAAAAGCTCTTTGAGAGCCTTTTCATGTTTCTCCGGCTTGAGTCCCTTATGGAGGCATCATCAGACTCTGATGTATCCAGTTTACTTGACCAGCAAACTAGGCAATCAGGAGATGGCAGTAATAACAGTGATCCTTACTCCGTTGTAGACCTGTCAGTCGCATCGGAGGACTCAATCGTGCCAGCTGATTCTCCATTGGGCGCAAATAATGCTGTGATATCCACCCATCAGGCAGCCAGCCGGGTGGAGATTGATGAGATAGAGTTCTTGAACAACTGTAAAGATGCAGGGGTGGTGCACATACTGGGAAATACTGTAGTAAGGGCCAGGAAGAACTCGAAATTTTGGAAGAAGATAGCTATTGATTATCTATATGCATTTCTTAGGAAGATATGCAGGGGAAATAGTGTAATGTTTAACATTCCTCATGAGAGTCTCTTGAATGTTGGGCAGATATTCTATGTATAA

Protein Analysis

786

Amino Acids

87.09

Weight (kDa)

8.39

Isoelectric Point (pI)

36.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 49 - 323 1.3e-83 K+ potassium transporter integral membrane domain
K_trans PF02705 324 - 501 2.2e-54 K+ potassium transporter integral membrane domain
K_trans_C PF22776 514 - 748 2.5e-24 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1439
AasI GACNNNNNNGTC 1 cut(s) 2045
Acc65I GGTACC 1 cut(s) 1639
AccB1I GGYRCC 1 cut(s) 1639
AccB7I CCANNNNNTGG 1 cut(s) 486
AccBSI CCGCTC 1 cut(s) 1789
AccI GTMKAC 3 cut(s) 376, 1659, 2037
AciI CCGC 3 cut(s) 1719, 1789, 1804
AclWI GGATC 3 cut(s) 60, 617, 2015
AcsI RAATTY 5 cut(s) 119, 567, 788, 1819, 2231
AfeI AGCGCT 1 cut(s) 1562
AfiI CCNNNNNNNGG 6 cut(s) 166, 486, 1625, 1649, 1851, 1942
AflIII ACRYGT 2 cut(s) 965, 1827
AgsI TTSAA 6 cut(s) 155, 511, 778, 1593, 2161, 2332
AjnI CCWGG 4 cut(s) 86, 405, 1642, 2216
Alw21I GWGCWC 2 cut(s) 518, 2190
Alw26I GTCTC 1 cut(s) 2330
Alw44I GTGCAC 1 cut(s) 2186
AlwI GGATC 3 cut(s) 60, 617, 2015
AlwNI CAGNNNCTG 1 cut(s) 1958
Aor51HI AGCGCT 1 cut(s) 1562
AoxI GGCC 5 cut(s) 84, 1082, 1128, 1164, 2214
ApaLI GTGCAC 1 cut(s) 2186
ApeKI GCWGC 9 cut(s) 58, 142, 470, 1010, 1106, 1109, 1179, 1514, 2123
ApoI RAATTY 5 cut(s) 119, 567, 788, 1819, 2231
ArsI GACNNNNNNTTYG 4 cut(s) 178, 210, 1868, 1900
Asp718I GGTACC 1 cut(s) 1639
AspLEI GCGC 2 cut(s) 1563, 2093
AspS9I GGNCC 5 cut(s) 1083, 1165, 1616, 1811, 2214
AsuC2I CCSGG 2 cut(s) 239, 2132
AsuHPI GGTGA 7 cut(s) 245, 467, 565, 810, 1217, 1363, 1699
AsuNHI GCTAGC 1 cut(s) 1669
AvaII GGWCC 2 cut(s) 1616, 1811
BaeGI GKGCMC 2 cut(s) 1451, 2190
BaeI ACNNNNGTAYC 2 cut(s) 665, 698
BanI GGYRCC 1 cut(s) 1639
BbsI GAAGAC 2 cut(s) 196, 1411
Bbv12I GWGCWC 2 cut(s) 518, 2190
BbvI GCAGC 9 cut(s) 70, 154, 457, 997, 1093, 1096, 1166, 1526, 2135
BccI CCATC 5 cut(s) 480, 557, 854, 1997, 2124
BceAI ACGGC 3 cut(s) 1262, 1299, 1344
BciT130I CCWGG 4 cut(s) 88, 407, 1644, 2218
BciVI GTATCC 1 cut(s) 1975
BclI TGATCA 2 cut(s) 64, 1033
BcnI CCSGG 2 cut(s) 239, 2132
BcoDI GTCTC 1 cut(s) 2330
BfaI CTAG 6 cut(s) 182, 402, 1502, 1620, 1670, 1989
BfmI CTRYAG 3 cut(s) 140, 319, 2205
BfoI RGCGCY 1 cut(s) 1564
BfuI GTATCC 1 cut(s) 1975
BglI GCCNNNNNGGC 1 cut(s) 1283
BglII AGATCT 2 cut(s) 178, 1861
BisI GCNGC 9 cut(s) 59, 143, 471, 1011, 1107, 1110, 1180, 1515, 2124
BlsI GCNGC 9 cut(s) 60, 144, 472, 1012, 1108, 1111, 1181, 1516, 2125
Bme1390I CCNGG 6 cut(s) 88, 239, 407, 1644, 2132, 2218
Bme18I GGWCC 2 cut(s) 1616, 1811
BmgT120I GGNCC 5 cut(s) 1083, 1165, 1616, 1811, 2214
BmiI GGNNCC 7 cut(s) 7, 256, 1497, 1617, 1641, 1793, 1813
BmrFI CCNGG 6 cut(s) 88, 239, 407, 1644, 2132, 2218
BmrI ACTGGG 3 cut(s) 932, 1622, 2204
BmsI GCATC 3 cut(s) 1955, 2060, 2164
BmtI GCTAGC 1 cut(s) 1673
BmuI ACTGGG 3 cut(s) 932, 1622, 2204
BoxI GACNNNNGTC 1 cut(s) 336
BpiI GAAGAC 2 cut(s) 196, 1411
BpmI CTGGAG 1 cut(s) 561
BpuEI CTTGAG 2 cut(s) 1457, 1949
BpuMI CCSGG 2 cut(s) 239, 2132
BsaJI CCNNGG 2 cut(s) 160, 697
BsaXI ACNNNNNCTCC 2 cut(s) 30, 60
Bsc4I CCNNNNNNNGG 6 cut(s) 166, 486, 1625, 1649, 1851, 1942
Bse1I ACTGG 7 cut(s) 675, 938, 1429, 1617, 1635, 1968, 2199
Bse3DI GCAATG 3 cut(s) 1272, 1358, 1393
BseBI CCWGG 4 cut(s) 88, 407, 1644, 2218
BseDI CCNNGG 2 cut(s) 160, 697
BseGI GGATG 1 cut(s) 568
BseLI CCNNNNNNNGG 6 cut(s) 166, 486, 1625, 1649, 1851, 1942
BseMI GCAATG 3 cut(s) 1272, 1358, 1393
BseMII CTCAG 2 cut(s) 904, 1656
BseNI ACTGG 7 cut(s) 675, 938, 1429, 1617, 1635, 1968, 2199
BseRI GAGGAG 4 cut(s) 95, 437, 731, 1460
BseSI GKGCMC 2 cut(s) 1451, 2190
BseXI GCAGC 9 cut(s) 70, 154, 457, 997, 1093, 1096, 1166, 1526, 2135
BseYI CCCAGC 1 cut(s) 1286
BshFI GGCC 5 cut(s) 86, 1084, 1130, 1166, 2216
BshNI GGYRCC 1 cut(s) 1639
BsiHKAI GWGCWC 2 cut(s) 518, 2190
BsiSI CCGG 3 cut(s) 239, 1924, 2131
BslFI GGGAC 6 cut(s) 199, 510, 913, 926, 1339, 1918
BslI CCNNNNNNNGG 6 cut(s) 166, 486, 1625, 1649, 1851, 1942
BsmAI GTCTC 1 cut(s) 2330
BsmFI GGGAC 6 cut(s) 199, 510, 913, 926, 1339, 1918
BsnI GGCC 5 cut(s) 86, 1084, 1130, 1166, 2216
Bsp1286I GDGCHC 3 cut(s) 518, 1451, 2190
Bsp1407I TGTACA 1 cut(s) 1769
Bsp143I GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
BspACI CCGC 3 cut(s) 1719, 1789, 1804
BspANI GGCC 5 cut(s) 86, 1084, 1130, 1166, 2216
BspCNI CTCAG 2 cut(s) 903, 1657
BspHI TCATGA 3 cut(s) 1020, 1377, 2317
BspLI GGNNCC 7 cut(s) 7, 256, 1497, 1617, 1641, 1793, 1813
BspMAI CTGCAG 1 cut(s) 144
BspOI GCTAGC 1 cut(s) 1673
BspPI GGATC 3 cut(s) 60, 617, 2015
BspQI GCTCTTC 3 cut(s) 448, 506, 1779
BspT107I GGYRCC 1 cut(s) 1639
BsrBI CCGCTC 1 cut(s) 1789
BsrDI GCAATG 3 cut(s) 1272, 1358, 1393
BsrGI TGTACA 1 cut(s) 1769
BsrI ACTGG 7 cut(s) 675, 938, 1429, 1617, 1635, 1968, 2199
BssECI CCNNGG 2 cut(s) 160, 697
BssMI GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
BssT1I CCWWGG 1 cut(s) 160
Bst2UI CCWGG 4 cut(s) 88, 407, 1644, 2218
Bst6I CTCTTC 3 cut(s) 448, 506, 1779
BstAPI GCANNNNNTGC 2 cut(s) 1148, 2099
BstAUI TGTACA 1 cut(s) 1769
BstC8I GCNNGC 6 cut(s) 147, 1164, 1541, 1671, 2073, 2128
BstDEI CTNAG 4 cut(s) 95, 890, 1665, 2273
BstDSI CCRYGG 1 cut(s) 697
BstEII GGTNACC 2 cut(s) 233, 1351
BstENI CCTNNNNNAGG 3 cut(s) 1623, 1647, 1940
BstF5I GGATG 1 cut(s) 568
BstH2I RGCGCY 1 cut(s) 1564
BstHHI GCGC 2 cut(s) 1563, 2093
BstKTI GATC 8 cut(s) 55, 67, 181, 464, 612, 1036, 1864, 2023
BstMAI GTCTC 1 cut(s) 2330
BstMBI GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
BstMWI GCNNNNNNNGC 9 cut(s) 67, 917, 1106, 1118, 1127, 1148, 1283, 1990, 2099
BstNI CCWGG 4 cut(s) 88, 407, 1644, 2218
BstNSI RCATGY 5 cut(s) 383, 503, 775, 969, 1831
BstPAI GACNNNNGTC 1 cut(s) 336
BstPI GGTNACC 2 cut(s) 233, 1351
BstSCI CCNGG 6 cut(s) 86, 237, 405, 1642, 2130, 2216
BstSFI CTRYAG 3 cut(s) 140, 319, 2205
BstSLI GKGCMC 2 cut(s) 1451, 2190
BstV1I GCAGC 9 cut(s) 70, 154, 457, 997, 1093, 1096, 1166, 1526, 2135
BstV2I GAAGAC 2 cut(s) 196, 1411
BstX2I RGATCY 2 cut(s) 178, 1861
BstXI CCANNNNNNTGG 1 cut(s) 2134
BstYI RGATCY 2 cut(s) 178, 1861
BsuI GTATCC 1 cut(s) 1975
BsuRI GGCC 5 cut(s) 86, 1084, 1130, 1166, 2216
BtgI CCRYGG 1 cut(s) 697
BtsCI GGATG 1 cut(s) 568
BtsIMutI CAGTG 3 cut(s) 1422, 1662, 2023
Cac8I GCNNGC 6 cut(s) 147, 1164, 1541, 1671, 2073, 2128
CaiI CAGNNNCTG 1 cut(s) 1958
CciI TCATGA 3 cut(s) 1020, 1377, 2317
CfoI GCGC 2 cut(s) 1563, 2093
Cfr13I GGNCC 5 cut(s) 1083, 1165, 1616, 1811, 2214
CsiI ACCWGGT 1 cut(s) 1642
CspCI CAANNNNNGTGG 2 cut(s) 1468, 1503
DdeI CTNAG 4 cut(s) 95, 890, 1665, 2273
DpnI GATC 8 cut(s) 54, 66, 180, 463, 611, 1035, 1863, 2022
DpnII GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
DraI TTTAAA 2 cut(s) 807, 1294
DrdI GACNNNNNNGTC 1 cut(s) 2045
DseDI GACNNNNNNGTC 1 cut(s) 2045
Eam1104I CTCTTC 3 cut(s) 448, 506, 1779
EarI CTCTTC 3 cut(s) 448, 506, 1779
Eco130I CCWWGG 1 cut(s) 160
Eco32I GATATC 2 cut(s) 1509, 2109
Eco47I GGWCC 2 cut(s) 1616, 1811
Eco47III AGCGCT 1 cut(s) 1562
Eco91I GGTNACC 2 cut(s) 233, 1351
EcoNI CCTNNNNNAGG 3 cut(s) 1623, 1647, 1940
EcoO109I RGGNCCY 2 cut(s) 1165, 1616
EcoO65I GGTNACC 2 cut(s) 233, 1351
EcoRI GAATTC 1 cut(s) 567
EcoRII CCWGG 4 cut(s) 86, 405, 1642, 2216
EcoRV GATATC 2 cut(s) 1509, 2109
EcoT14I CCWWGG 1 cut(s) 160
EcoT22I ATGCAT 2 cut(s) 505, 2269
ErhI CCWWGG 1 cut(s) 160
FaqI GGGAC 6 cut(s) 199, 510, 913, 926, 1339, 1918
FauI CCCGC 1 cut(s) 1726
FbaI TGATCA 2 cut(s) 64, 1033
FblI GTMKAC 3 cut(s) 376, 1659, 2037
Fnu4HI GCNGC 9 cut(s) 59, 143, 471, 1011, 1107, 1110, 1180, 1515, 2124
FokI GGATG 1 cut(s) 575
Fsp4HI GCNGC 9 cut(s) 59, 143, 471, 1011, 1107, 1110, 1180, 1515, 2124
FspBI CTAG 6 cut(s) 182, 402, 1502, 1620, 1670, 1989
GlaI GCGC 2 cut(s) 1562, 2092
GluI GCNGC 9 cut(s) 59, 143, 471, 1011, 1107, 1110, 1180, 1515, 2124
GsaI CCCAGC 1 cut(s) 1290
GsuI CTGGAG 1 cut(s) 561
HaeII RGCGCY 1 cut(s) 1564
HaeIII GGCC 5 cut(s) 86, 1084, 1130, 1166, 2216
HapII CCGG 3 cut(s) 239, 1924, 2131
HhaI GCGC 2 cut(s) 1563, 2093
Hin6I GCGC 2 cut(s) 1561, 2091
HinP1I GCGC 2 cut(s) 1561, 2091
HincII GTYRAC 1 cut(s) 377
HindII GTYRAC 1 cut(s) 377
HindIII AAGCTT 1 cut(s) 810
HpaII CCGG 3 cut(s) 239, 1924, 2131
HphI GGTGA 7 cut(s) 245, 467, 565, 810, 1217, 1363, 1699
Hpy166II GTNNAC 8 cut(s) 377, 684, 867, 1042, 1660, 1973, 2038, 2188
Hpy188I TCNGA 4 cut(s) 1033, 1954, 1960, 2056
Hpy8I GTNNAC 8 cut(s) 377, 684, 867, 1042, 1660, 1973, 2038, 2188
HpyAV CCTTC 5 cut(s) 841, 990, 995, 1528, 1769
HpyF10VI GCNNNNNNNGC 9 cut(s) 67, 917, 1106, 1118, 1127, 1148, 1283, 1990, 2099
HpyF3I CTNAG 4 cut(s) 95, 890, 1665, 2273
HspAI GCGC 2 cut(s) 1561, 2091
KpnI GGTACC 1 cut(s) 1643
Ksp22I TGATCA 2 cut(s) 64, 1033
Kzo9I GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
LguI GCTCTTC 3 cut(s) 448, 506, 1779
LmnI GCTCC 2 cut(s) 254, 424
Lsp1109I GCAGC 9 cut(s) 70, 154, 457, 997, 1093, 1096, 1166, 1526, 2135
LweI GCATC 3 cut(s) 1955, 2060, 2164
MabI ACCWGGT 1 cut(s) 1642
MaeI CTAG 6 cut(s) 182, 402, 1502, 1620, 1670, 1989
MaeIII GTNAC 6 cut(s) 233, 366, 620, 1223, 1279, 1351
MalI GATC 8 cut(s) 54, 66, 180, 463, 611, 1035, 1863, 2022
MbiI CCGCTC 1 cut(s) 1789
MboI GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 2 cut(s) 178, 1861
MhlI GDGCHC 3 cut(s) 518, 1451, 2190
MlyI GAGTC 6 cut(s) 1132, 1200, 1940, 1949, 2054, 2332
MmeI TCCRAC 1 cut(s) 471
Mph1103I ATGCAT 2 cut(s) 505, 2269
MseI TTAA 5 cut(s) 806, 843, 1158, 1293, 2307
MslI CAYNNNNRTG 1 cut(s) 1277
MspA1I CMGCKG 1 cut(s) 2075
MspI CCGG 3 cut(s) 239, 1924, 2131
MspR9I CCNGG 6 cut(s) 88, 239, 407, 1644, 2132, 2218
MunI CAATTG 1 cut(s) 732
MvaI CCWGG 4 cut(s) 88, 407, 1644, 2218
MwoI GCNNNNNNNGC 9 cut(s) 67, 917, 1106, 1118, 1127, 1148, 1283, 1990, 2099
NciI CCSGG 2 cut(s) 239, 2132
NdeII GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
NheI GCTAGC 1 cut(s) 1669
NlaIV GGNNCC 7 cut(s) 7, 256, 1497, 1617, 1641, 1793, 1813
NmuCI GTSAC 5 cut(s) 233, 620, 1223, 1279, 1351
NsiI ATGCAT 2 cut(s) 505, 2269
NspI RCATGY 5 cut(s) 383, 503, 775, 969, 1831
PagI TCATGA 3 cut(s) 1020, 1377, 2317
PciI ACATGT 2 cut(s) 965, 1827
PciSI GCTCTTC 3 cut(s) 448, 506, 1779
PfeI GAWTC 4 cut(s) 1063, 1405, 1603, 2078
PflFI GACNNNGTC 1 cut(s) 1614
PflMI CCANNNNNTGG 1 cut(s) 486
PkrI GCNGC 9 cut(s) 60, 144, 472, 1012, 1108, 1111, 1181, 1516, 2125
PleI GAGTC 6 cut(s) 1131, 1199, 1939, 1949, 2054, 2331
PpsI GAGTC 6 cut(s) 1131, 1199, 1939, 1949, 2054, 2331
PpuMI RGGWCCY 1 cut(s) 1616
PscI ACATGT 2 cut(s) 965, 1827
PshAI GACNNNNGTC 1 cut(s) 336
PsiI TTATAA 1 cut(s) 1439
Psp5II RGGWCCY 1 cut(s) 1616
Psp6I CCWGG 4 cut(s) 86, 405, 1642, 2216
PspEI GGTNACC 2 cut(s) 233, 1351
PspFI CCCAGC 1 cut(s) 1286
PspGI CCWGG 4 cut(s) 86, 405, 1642, 2216
PspN4I GGNNCC 7 cut(s) 7, 256, 1497, 1617, 1641, 1793, 1813
PspPI GGNCC 5 cut(s) 1083, 1165, 1616, 1811, 2214
PspPPI RGGWCCY 1 cut(s) 1616
PstI CTGCAG 1 cut(s) 144
PstNI CAGNNNCTG 1 cut(s) 1958
PsuI RGATCY 2 cut(s) 178, 1861
PsyI GACNNNGTC 1 cut(s) 1614
PvuII CAGCTG 1 cut(s) 2075
RseI CAYNNNNRTG 1 cut(s) 1277
SalI GTCGAC 1 cut(s) 375
SapI GCTCTTC 3 cut(s) 448, 506, 1779
SaqAI TTAA 5 cut(s) 806, 843, 1158, 1293, 2307
SatI GCNGC 9 cut(s) 59, 143, 471, 1011, 1107, 1110, 1180, 1515, 2124
Sau3AI GATC 8 cut(s) 52, 64, 178, 461, 609, 1033, 1861, 2020
Sau96I GGNCC 5 cut(s) 1083, 1165, 1616, 1811, 2214
SchI GAGTC 6 cut(s) 1132, 1200, 1940, 1949, 2054, 2332
ScrFI CCNGG 6 cut(s) 88, 239, 407, 1644, 2132, 2218
SduI GDGCHC 3 cut(s) 518, 1451, 2190
SexAI ACCWGGT 1 cut(s) 1642
SfaNI GCATC 3 cut(s) 1955, 2060, 2164
SfcI CTRYAG 3 cut(s) 140, 319, 2205
SinI GGWCC 2 cut(s) 1616, 1811
SmiMI CAYNNNNRTG 1 cut(s) 1277
SmlI CTYRAG 2 cut(s) 1472, 1928
SmoI CTYRAG 2 cut(s) 1472, 1928
SsiI CCGC 3 cut(s) 1719, 1789, 1804
SspMI CTAG 6 cut(s) 182, 402, 1502, 1620, 1670, 1989
StyD4I CCNGG 6 cut(s) 86, 237, 405, 1642, 2130, 2216
StyI CCWWGG 1 cut(s) 160
TaqI TCGA 5 cut(s) 125, 376, 792, 1061, 2228
TatI WGTACW 3 cut(s) 736, 1465, 1769
TfiI GAWTC 4 cut(s) 1063, 1405, 1603, 2078
Tru1I TTAA 5 cut(s) 806, 843, 1158, 1293, 2307
Tru9I TTAA 5 cut(s) 806, 843, 1158, 1293, 2307
TscAI CASTG 3 cut(s) 1429, 1669, 2023
TseFI GTSAC 5 cut(s) 233, 620, 1223, 1279, 1351
TseI GCWGC 9 cut(s) 58, 142, 470, 1010, 1106, 1109, 1179, 1514, 2123
Tsp45I GTSAC 5 cut(s) 233, 620, 1223, 1279, 1351
TspDTI ATGAA 6 cut(s) 30, 314, 1037, 1568, 1715, 1903
TspGWI ACGGA 3 cut(s) 608, 1823, 2020
TspRI CASTG 3 cut(s) 1429, 1669, 2023
Tth111I GACNNNGTC 1 cut(s) 1614
Van91I CCANNNNNTGG 1 cut(s) 486
VneI GTGCAC 1 cut(s) 2186
VpaK11BI GGWCC 2 cut(s) 1616, 1811
XagI CCTNNNNNAGG 3 cut(s) 1623, 1647, 1940
XapI RAATTY 5 cut(s) 119, 567, 788, 1819, 2231
XceI RCATGY 5 cut(s) 383, 503, 775, 969, 1831
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 1248
XmiI GTMKAC 3 cut(s) 376, 1659, 2037
XspI CTAG 6 cut(s) 182, 402, 1502, 1620, 1670, 1989
Zsp2I ATGCAT 2 cut(s) 505, 2269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.