Rmu_sc0009745.1_g000016

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009745.1
Physical Location & Seq
Reverse (-)
54414 .. 55448
1035 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009745.1_g000016.1.cds

Sequence Viewer

Length: 1035 bp
atgttggtaaccacattgcttatgattttggtcatgatattggtctggcgctgccatttgattcttgtcctcctcttcactggtttatcactactaatagagggcacttacttctctgctgtactcctcaaggtcaatcaaggtggctgggttcctcttgtgatctcagcagccttctttattgttatgtatgcttggcattatggtacagtaaaacgttacgagattgaagtccacagtaaggtctcgatggcatggattctcggacttggtcccagtttaggattggttcgtgtacctgggataggccttgtgtacactgagctagcaagtggagtgcctcgcatcttttctcacttgatcaccaacctacccgccatccataatgttgttgtctttgtctgtgtgaagtaccttcctgtctacacagtccaagaagaagaaaggttccttgtaaagcggattggcccaaagaatttccacatgtttcgctgcgttgcaagatatggctataaagacatccacacaaaagatgatgattttgagaaaaaactctttgccagtcttttcttgtttctcctggaagagtcattggcagaaccatcttctggctctgatatatctagtttacttggtcagcaaactaggcaatcaagaagtagcacgttcaatagtatcagcaacataccttactccaccgcagacctgtcaattcagtcgaatgactcaatcgtcctgggtggttctccacttcatgaaaacaacactttgacatcctctgatattcagccaagcagccaggtggtcgaagacgagattgatgagactgagttcttgaacaactgtagagatgtaggggtggtgcacatacttggaaacactgtagtgagagccagcaggaactcaaacttttggaagagaataactattgattacctatatgcatttcttaggaagatatgttggggaaacagtgtaatgcttaatgttcctcatgagagtctcttgaatgttgggcaggtattatatgtatga

Protein Analysis

344

Amino Acids

38.68

Weight (kDa)

6.55

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 731
Acc36I ACCTGC 1 cut(s) 1009
AccB7I CCANNNNNTGG 1 cut(s) 608
AccI GTMKAC 1 cut(s) 423
AciI CCGC 3 cut(s) 375, 460, 699
AclI AACGTT 1 cut(s) 217
AcsI RAATTY 1 cut(s) 475
AfaI GTAC 5 cut(s) 123, 208, 297, 317, 413
AfiI CCNNNNNNNGG 4 cut(s) 241, 281, 305, 608
AflIII ACRYGT 1 cut(s) 483
AgsI TTSAA 4 cut(s) 230, 670, 838, 1009
AjnI CCWGG 4 cut(s) 298, 579, 735, 798
AleI CACNNNNGTG 1 cut(s) 884
AluBI AGCT 1 cut(s) 325
AluI AGCT 1 cut(s) 325
Alw21I GWGCWC 1 cut(s) 867
Alw26I GTCTC 3 cut(s) 250, 818, 1007
Alw44I GTGCAC 1 cut(s) 863
AoxI GGCC 2 cut(s) 307, 466
ApaLI GTGCAC 1 cut(s) 863
ApeKI GCWGC 4 cut(s) 51, 170, 492, 795
ApoI RAATTY 1 cut(s) 475
AspLEI GCGC 1 cut(s) 51
AspS9I GGNCC 2 cut(s) 272, 467
AsuHPI GGTGA 1 cut(s) 355
AsuNHI GCTAGC 1 cut(s) 325
AvaII GGWCC 1 cut(s) 272
BaeGI GKGCMC 2 cut(s) 107, 867
BbsI GAAGAC 1 cut(s) 816
Bbv12I GWGCWC 1 cut(s) 867
BbvI GCAGC 4 cut(s) 38, 182, 479, 807
BccI CCATC 3 cut(s) 244, 386, 610
BciT130I CCWGG 4 cut(s) 300, 581, 737, 800
BclI TGATCA 1 cut(s) 360
BcoDI GTCTC 3 cut(s) 250, 818, 1007
BfaI CTAG 3 cut(s) 326, 624, 645
BfmI CTRYAG 2 cut(s) 844, 882
BfoI RGCGCY 1 cut(s) 52
BfuAI ACCTGC 1 cut(s) 1009
BisI GCNGC 4 cut(s) 52, 171, 493, 796
BlsI GCNGC 4 cut(s) 53, 172, 494, 797
Bme1390I CCNGG 4 cut(s) 300, 581, 737, 800
Bme18I GGWCC 1 cut(s) 272
BmgT120I GGNCC 2 cut(s) 272, 467
BmiI GGNNCC 3 cut(s) 153, 274, 449
BmrFI CCNGG 4 cut(s) 300, 581, 737, 800
BmrI ACTGGG 1 cut(s) 270
BmsI GCATC 1 cut(s) 354
BmtI GCTAGC 1 cut(s) 329
BmuI ACTGGG 1 cut(s) 270
BpiI GAAGAC 1 cut(s) 816
BpuEI CTTGAG 1 cut(s) 113
BsaI GGTCTC 1 cut(s) 250
BsaJI CCNNGG 2 cut(s) 299, 736
Bsc4I CCNNNNNNNGG 4 cut(s) 241, 281, 305, 608
Bse1I ACTGG 3 cut(s) 85, 276, 561
Bse3DI GCAATG 1 cut(s) 14
BseBI CCWGG 4 cut(s) 300, 581, 737, 800
BseDI CCNNGG 2 cut(s) 299, 736
BseGI GGATG 3 cut(s) 378, 519, 773
BseLI CCNNNNNNNGG 4 cut(s) 241, 281, 305, 608
BseMI GCAATG 1 cut(s) 14
BseMII CTCAG 3 cut(s) 180, 312, 819
BseNI ACTGG 3 cut(s) 85, 276, 561
BseRI GAGGAG 2 cut(s) 62, 116
BseSI GKGCMC 2 cut(s) 107, 867
BseXI GCAGC 4 cut(s) 38, 182, 479, 807
BseYI CCCAGC 1 cut(s) 147
BshFI GGCC 2 cut(s) 309, 468
BsiHKAI GWGCWC 1 cut(s) 867
BslFI GGGAC 1 cut(s) 258
BslI CCNNNNNNNGG 4 cut(s) 241, 281, 305, 608
BsmAI GTCTC 3 cut(s) 250, 818, 1007
BsmFI GGGAC 1 cut(s) 258
BsnI GGCC 2 cut(s) 309, 468
Bso31I GGTCTC 1 cut(s) 250
Bsp1286I GDGCHC 2 cut(s) 107, 867
Bsp1407I TGTACA 1 cut(s) 315
Bsp143I GATC 2 cut(s) 162, 360
BspACI CCGC 3 cut(s) 375, 460, 699
BspANI GGCC 2 cut(s) 309, 468
BspCNI CTCAG 3 cut(s) 179, 313, 820
BspHI TCATGA 3 cut(s) 33, 754, 994
BspLI GGNNCC 3 cut(s) 153, 274, 449
BspMI ACCTGC 1 cut(s) 1009
BspOI GCTAGC 1 cut(s) 329
BspTNI GGTCTC 1 cut(s) 250
BsrDI GCAATG 1 cut(s) 14
BsrGI TGTACA 1 cut(s) 315
BsrI ACTGG 3 cut(s) 85, 276, 561
BssECI CCNNGG 2 cut(s) 299, 736
BssMI GATC 2 cut(s) 162, 360
Bst2UI CCWGG 4 cut(s) 300, 581, 737, 800
Bst4CI ACNGT 6 cut(s) 211, 239, 430, 845, 883, 974
Bst6I CTCTTC 3 cut(s) 80, 579, 911
BstAUI TGTACA 1 cut(s) 315
BstC8I GCNNGC 2 cut(s) 327, 895
BstDEI CTNAG 4 cut(s) 166, 321, 828, 950
BstEII GGTNACC 1 cut(s) 7
BstENI CCTNNNNNAGG 1 cut(s) 303
BstF5I GGATG 3 cut(s) 378, 519, 773
BstH2I RGCGCY 1 cut(s) 52
BstHHI GCGC 1 cut(s) 51
BstKTI GATC 2 cut(s) 165, 363
BstMAI GTCTC 3 cut(s) 250, 818, 1007
BstMBI GATC 2 cut(s) 162, 360
BstMWI GCNNNNNNNGC 1 cut(s) 646
BstNI CCWGG 4 cut(s) 300, 581, 737, 800
BstNSI RCATGY 1 cut(s) 487
BstPI GGTNACC 1 cut(s) 7
BstSCI CCNGG 4 cut(s) 298, 579, 735, 798
BstSFI CTRYAG 2 cut(s) 844, 882
BstSLI GKGCMC 2 cut(s) 107, 867
BstV1I GCAGC 4 cut(s) 38, 182, 479, 807
BstV2I GAAGAC 1 cut(s) 816
BsuRI GGCC 2 cut(s) 309, 468
BtsCI GGATG 3 cut(s) 378, 519, 773
BtsIMutI CAGTG 4 cut(s) 78, 318, 879, 979
BveI ACCTGC 1 cut(s) 1009
Cac8I GCNNGC 2 cut(s) 327, 895
CciI TCATGA 3 cut(s) 33, 754, 994
CfoI GCGC 1 cut(s) 51
Cfr13I GGNCC 2 cut(s) 272, 467
Csp6I GTAC 5 cut(s) 122, 207, 296, 316, 412
CspCI CAANNNNNGTGG 2 cut(s) 124, 159
CviAII CATG 5 cut(s) 34, 255, 484, 755, 995
CviQI GTAC 5 cut(s) 122, 207, 296, 316, 412
DdeI CTNAG 4 cut(s) 166, 321, 828, 950
DpnI GATC 2 cut(s) 164, 362
DpnII GATC 2 cut(s) 162, 360
DrdI GACNNNNNNGTC 1 cut(s) 731
DseDI GACNNNNNNGTC 1 cut(s) 731
Eam1104I CTCTTC 3 cut(s) 80, 579, 911
EarI CTCTTC 3 cut(s) 80, 579, 911
Eco147I AGGCCT 1 cut(s) 309
Eco31I GGTCTC 1 cut(s) 250
Eco47I GGWCC 1 cut(s) 272
Eco91I GGTNACC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 303
EcoO65I GGTNACC 1 cut(s) 7
EcoRII CCWGG 4 cut(s) 298, 579, 735, 798
EcoT22I ATGCAT 1 cut(s) 946
FaeI CATG 5 cut(s) 37, 258, 487, 758, 998
FaqI GGGAC 1 cut(s) 258
FatI CATG 5 cut(s) 33, 254, 483, 754, 994
FauI CCCGC 1 cut(s) 382
FbaI TGATCA 1 cut(s) 360
FblI GTMKAC 1 cut(s) 423
Fnu4HI GCNGC 4 cut(s) 52, 171, 493, 796
FokI GGATG 3 cut(s) 365, 506, 760
Fsp4HI GCNGC 4 cut(s) 52, 171, 493, 796
FspBI CTAG 3 cut(s) 326, 624, 645
GlaI GCGC 1 cut(s) 50
GluI GCNGC 4 cut(s) 52, 171, 493, 796
GsaI CCCAGC 1 cut(s) 151
HaeII RGCGCY 1 cut(s) 52
HaeIII GGCC 2 cut(s) 309, 468
HhaI GCGC 1 cut(s) 51
Hin1II CATG 5 cut(s) 37, 258, 487, 758, 998
Hin6I GCGC 1 cut(s) 49
HinP1I GCGC 1 cut(s) 49
HinfI GANTC 5 cut(s) 61, 259, 587, 725, 1000
HphI GGTGA 1 cut(s) 355
Hpy166II GTNNAC 7 cut(s) 235, 296, 316, 318, 424, 629, 865
Hpy188I TCNGA 3 cut(s) 266, 616, 781
Hpy188III TCNNGA 7 cut(s) 34, 247, 654, 755, 835, 995, 1006
Hpy8I GTNNAC 7 cut(s) 235, 296, 316, 318, 424, 629, 865
HpyAV CCTTC 2 cut(s) 184, 425
HpyCH4III ACNGT 6 cut(s) 211, 239, 430, 845, 883, 974
HpyCH4IV ACGT 2 cut(s) 217, 665
HpyCH4V TGCA 3 cut(s) 500, 865, 944
HpyF10VI GCNNNNNNNGC 1 cut(s) 646
HpyF3I CTNAG 4 cut(s) 166, 321, 828, 950
HpySE526I ACGT 2 cut(s) 217, 665
Hsp92II CATG 5 cut(s) 37, 258, 487, 758, 998
HspAI GCGC 1 cut(s) 49
Ksp22I TGATCA 1 cut(s) 360
Kzo9I GATC 2 cut(s) 162, 360
Lsp1109I GCAGC 4 cut(s) 38, 182, 479, 807
LweI GCATC 1 cut(s) 354
MaeI CTAG 3 cut(s) 326, 624, 645
MaeII ACGT 2 cut(s) 217, 665
MaeIII GTNAC 2 cut(s) 7, 218
MalI GATC 2 cut(s) 164, 362
MboI GATC 2 cut(s) 162, 360
MboII GAAGA 8 cut(s) 67, 449, 452, 596, 597, 821, 928, 967
MhlI GDGCHC 2 cut(s) 107, 867
MluCI AATT 2 cut(s) 475, 711
MlyI GAGTC 3 cut(s) 596, 719, 1009
MnlI CCTC 8 cut(s) 80, 83, 94, 137, 165, 351, 787, 1002
Mph1103I ATGCAT 1 cut(s) 946
MseI TTAA 1 cut(s) 984
MslI CAYNNNNRTG 1 cut(s) 884
MspR9I CCNGG 4 cut(s) 300, 581, 737, 800
MvaI CCWGG 4 cut(s) 300, 581, 737, 800
MwoI GCNNNNNNNGC 1 cut(s) 646
NdeII GATC 2 cut(s) 162, 360
NheI GCTAGC 1 cut(s) 325
NlaIII CATG 5 cut(s) 37, 258, 487, 758, 998
NlaIV GGNNCC 3 cut(s) 153, 274, 449
NsiI ATGCAT 1 cut(s) 946
NspI RCATGY 1 cut(s) 487
OliI CACNNNNGTG 1 cut(s) 884
PagI TCATGA 3 cut(s) 33, 754, 994
PceI AGGCCT 1 cut(s) 309
PciI ACATGT 1 cut(s) 483
PfeI GAWTC 2 cut(s) 61, 259
PflFI GACNNNGTC 1 cut(s) 270
PflMI CCANNNNNTGG 1 cut(s) 608
PfoI TCCNGGA 1 cut(s) 579
PkrI GCNGC 4 cut(s) 53, 172, 494, 797
PleI GAGTC 3 cut(s) 595, 719, 1008
PpsI GAGTC 3 cut(s) 595, 719, 1008
PscI ACATGT 1 cut(s) 483
Psp1406I AACGTT 1 cut(s) 217
Psp6I CCWGG 4 cut(s) 298, 579, 735, 798
PspEI GGTNACC 1 cut(s) 7
PspFI CCCAGC 1 cut(s) 147
PspGI CCWGG 4 cut(s) 298, 579, 735, 798
PspN4I GGNNCC 3 cut(s) 153, 274, 449
PspPI GGNCC 2 cut(s) 272, 467
PsyI GACNNNGTC 1 cut(s) 270
RsaI GTAC 5 cut(s) 123, 208, 297, 317, 413
RsaNI GTAC 5 cut(s) 122, 207, 296, 316, 412
RseI CAYNNNNRTG 1 cut(s) 884
SaqAI TTAA 1 cut(s) 984
SatI GCNGC 4 cut(s) 52, 171, 493, 796
Sau3AI GATC 2 cut(s) 162, 360
Sau96I GGNCC 2 cut(s) 272, 467
SchI GAGTC 3 cut(s) 596, 719, 1009
ScrFI CCNGG 4 cut(s) 300, 581, 737, 800
SduI GDGCHC 2 cut(s) 107, 867
SfaNI GCATC 1 cut(s) 354
SfcI CTRYAG 2 cut(s) 844, 882
SinI GGWCC 1 cut(s) 272
SmiMI CAYNNNNRTG 1 cut(s) 884
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 2 cut(s) 475, 711
SseBI AGGCCT 1 cut(s) 309
SsiI CCGC 3 cut(s) 375, 460, 699
SspMI CTAG 3 cut(s) 326, 624, 645
StuI AGGCCT 1 cut(s) 309
StyD4I CCNGG 4 cut(s) 298, 579, 735, 798
TaaI ACNGT 6 cut(s) 211, 239, 430, 845, 883, 974
TaiI ACGT 2 cut(s) 220, 668
TaqI TCGA 3 cut(s) 248, 719, 807
TasI AATT 2 cut(s) 475, 711
TatI WGTACW 2 cut(s) 121, 315
TfiI GAWTC 2 cut(s) 61, 259
Tru1I TTAA 1 cut(s) 984
Tru9I TTAA 1 cut(s) 984
TscAI CASTG 4 cut(s) 85, 325, 886, 979
TseI GCWGC 4 cut(s) 51, 170, 492, 795
TspDTI ATGAA 2 cut(s) 743, 771
TspRI CASTG 4 cut(s) 85, 325, 886, 979
Tth111I GACNNNGTC 1 cut(s) 270
Van91I CCANNNNNTGG 1 cut(s) 608
VneI GTGCAC 1 cut(s) 863
VpaK11BI GGWCC 1 cut(s) 272
XagI CCTNNNNNAGG 1 cut(s) 303
XapI RAATTY 1 cut(s) 475
XceI RCATGY 1 cut(s) 487
XcmI CCANNNNNNNNNTGG 1 cut(s) 283
XmiI GTMKAC 1 cut(s) 423
XspI CTAG 3 cut(s) 326, 624, 645
Zsp2I ATGCAT 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.