Rroxscaffold_1G00057800

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
79797767 .. 79803523
5757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00057800.1

Sequence Viewer

Length: 2256 bp
ATGGCTACAAATGAAGAAACTGGTGGCAAAGGTGGAGCGTGGGTTTTGGATCAGCAGCTTGATCAGCCTATGGATGAGGAGGCCAAGAGGCTTAGAAATATGTACCAAGAAAAGAAAATTTCGACAGCAATTCTTCTGCAGCTTGCATTTCAAAGCCTTGGTGTGGTCTATGGAGATTTAGGCACATCTCCTTTGTATGTCTTCTACAATACATTTCCCAGGGGAATTGACGATCCCGAGGATTTAATTGGAGCTTTGTCTGTCATTATATATTCCCTCACTCTTATTCCACTTGTGAAGTACGTTTTTATCGTCTGTAGAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTTTATTCGTTACTATGTCGACATGCCAAACTTAAAGCTATTCCTAACCAGGACAGAACAGATGAGGAGCTAACAACTTATAGCTCTTCTACATTTGGTGAGCAATCATTTGCTGCAAAAACCAAGAGATGGTTGGAGGGACATGCATTGATGAAGAGCACACTTCTTATCCTTGTCCTGATTGGATCTTGCATGGTGATTGGAGATGGGATTCTGACTCCAGCCATATCAGTTCTTTCAGCAGTTGGTGGGATCAATGTCCGTCACTCTCGGATTAGTAATGAGGTAGTTGTGCTTGTTGCCGTCGTCATACTGGTTCTTTTGTTTACCATGCAACACCATGGTACAGATAAAGTTGGTTGGCTTTTTGCACCAATTGTGCTTCTCTGGTTTCTCTTGATTGGAGGGATTGGCATGTTCAACATTTGGAAATTCGACAGGAACGTCTTAAAGGCTTTCTCGCCTTTGTATGTATATCGATTTTTTAAGAAGGGAGGAAAAGATGGTTGGACATCTCTGGGAGGTATAATGCTCAGTATAACAGGAACAGAAGCACTTTTTGCTGATCTGTCCCATTTCCCAGTCCCATCAATACAGATTGCTTTCACATGTGTTGTATTTCCTTCCCTTCTGTTAGCCTACTCTGGTCAAGCTGCCTACCTCATGAAACATTCTGATCATGTGTACGGTGCTTTTTACCATTCTATTCCAGACAGAATTTATTGGCCTGTGTTTGTTGTTGCTACTGCTGCTGCTGTTGTAGCGAGTCAGGCCACCATAACTGCAACTTTTGCATTAGTTAAGCAAGCCCTTGCACTTGGCTGTTTCCCAAGAGTCAAAGTTGTACATACGTCAAGGAAGTACCGTCACCAGATATATATTCCAGAAGTTAATTGGATTGTTATGGTTCTCTGCATTGCCGTGACAGCTGGGTTTAAAAATCAAAACCAAATTGGGAACGCCTCTGGGACGGCAGTTTGTATTGTTATGTTGGTGACCACATTGCTTATGATTTTAGTCATGATATTAGTGTGGCACTGCCATTGGGTTCTTGTCCTCATCTTCACAGGCTTATCATTTCTAATGGAGGGCACTTACTTTTCTGCTGTACTCCTCAAGGTCAATCAAGGTGGCTGGGTTCCTCTTGTGATATCAGCAGCTTTCTTTATTATTATGTATGTATGGCATTATGGTACAGTAAAGCGCTATGAGATTGAGGTTCACAGTAAGGTTTCAATGGCATGGATTCTTGGACTTGGTCCCAGTTTAGGACTGGTTCGGGTACCTGGTGTAGGCCTTGTGTACACTGAGCTAGCAAGTGGAGTTCCCCGCATCTTCTCTCACTTTATCACCAACCTACCTGCCATTCATTCTGTTGTTGTCTTTGTCTGTGTGAAGTACCTTCCTGTCTGTACAGTCCCAGAAGAAGAGCGGTTCCTTGTAAAGCGGATTGGACCCAAGAATTTTCACATGTTCCGTTGTGTTGCCAGATATGGGTATAAAGATCTCCATAGAAAAGATGATGATTTTGAGAAAAAGCTCTTTGACAGCCTTTTCATGTTTCTCCGGCTTGAGTCCCTGATGGAGGCATCATCAGACTCTGATGTATCTACTTTACTTGACCAGCAAACTAAGCAATCAGGAGATGGCCTGTTCAGTAATAACAGCGATCCTTACTCCATTGTAGACCTGTCAATCGCATCCGGGGACTCAATCGTGCCAGCTGATTCTTCATTGGGCGCAAACAATGCTGTGATATCCACCCATCAGGCAGGCAGCCAGGTGGAGATCGATGAGATAGAGTTCTTGAACAACTGTAAAGATGCAGGGGTGGTGCATACTGGGAAATACTGTAGTGAGAGCCAGGAAGAACTCAAAATTTTGGAAGAAGATAGCTATTGA

Protein Analysis

751

Amino Acids

83.13

Weight (kDa)

6.5

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 48 - 534 2e-160 K+ potassium transporter integral membrane domain
K_trans_C PF22776 547 - 628 2.6e-16 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 797
Acc36I ACCTGC 1 cut(s) 1723
Acc65I GGTACC 1 cut(s) 1636
AccB1I GGYRCC 1 cut(s) 1636
AccB7I CCANNNNNTGG 1 cut(s) 483
AccBSI CCGCTC 1 cut(s) 1786
AccI GTMKAC 2 cut(s) 373, 2040
AciI CCGC 3 cut(s) 1684, 1786, 1801
AclWI GGATC 5 cut(s) 57, 227, 547, 614, 2018
AcsI RAATTY 5 cut(s) 117, 785, 1071, 1816, 2232
AfeI AGCGCT 1 cut(s) 1559
AfiI CCNNNNNNNGG 6 cut(s) 163, 483, 1622, 1646, 1848, 1939
AflIII ACRYGT 2 cut(s) 962, 1824
AgsI TTSAA 4 cut(s) 152, 775, 1590, 2164
AjnI CCWGG 5 cut(s) 218, 402, 1639, 2133, 2217
AjuI GAANNNNNNNTTGG 2 cut(s) 844, 876
Alw21I GWGCWC 1 cut(s) 515
AlwI GGATC 5 cut(s) 57, 227, 547, 614, 2018
AlwNI CAGNNNCTG 1 cut(s) 1955
Ama87I CYCGRG 1 cut(s) 236
Aor51HI AGCGCT 1 cut(s) 1559
AoxI GGCC 5 cut(s) 81, 1079, 1125, 1648, 2002
ApeKI GCWGC 8 cut(s) 55, 139, 467, 1007, 1103, 1106, 1511, 2130
ApoI RAATTY 5 cut(s) 117, 785, 1071, 1816, 2232
Asp718I GGTACC 1 cut(s) 1636
AspLEI GCGC 2 cut(s) 1560, 2096
AspS9I GGNCC 2 cut(s) 1613, 1808
AsuC2I CCSGG 1 cut(s) 2059
AsuHPI GGTGA 5 cut(s) 464, 562, 1214, 1360, 1696
AsuNHI GCTAGC 1 cut(s) 1666
AvaI CYCGRG 1 cut(s) 236
AvaII GGWCC 2 cut(s) 1613, 1808
BaeGI GKGCMC 1 cut(s) 1448
BanI GGYRCC 1 cut(s) 1636
BbsI GAAGAC 1 cut(s) 193
Bbv12I GWGCWC 1 cut(s) 515
BbvI GCAGC 8 cut(s) 67, 151, 454, 994, 1090, 1093, 1523, 2142
BccI CCATC 7 cut(s) 477, 554, 851, 949, 1930, 1994, 2127
BceAI ACGGC 3 cut(s) 641, 1259, 1341
BciT130I CCWGG 5 cut(s) 220, 404, 1641, 2135, 2219
BclI TGATCA 2 cut(s) 61, 1030
BcnI CCSGG 1 cut(s) 2059
BfaI CTAG 1 cut(s) 1667
BfmI CTRYAG 3 cut(s) 137, 316, 2206
BfoI RGCGCY 1 cut(s) 1561
BfuAI ACCTGC 1 cut(s) 1723
BglII AGATCT 1 cut(s) 1858
BisI GCNGC 8 cut(s) 56, 140, 468, 1008, 1104, 1107, 1512, 2131
BlsI GCNGC 8 cut(s) 57, 141, 469, 1009, 1105, 1108, 1513, 2132
Bme1390I CCNGG 6 cut(s) 220, 404, 1641, 2059, 2135, 2219
Bme18I GGWCC 2 cut(s) 1613, 1808
BmeT110I CYCGRG 1 cut(s) 236
BmgT120I GGNCC 2 cut(s) 1613, 1808
BmiI GGNNCC 5 cut(s) 1494, 1615, 1638, 1790, 1810
BmrFI CCNGG 6 cut(s) 220, 404, 1641, 2059, 2135, 2219
BmrI ACTGGG 3 cut(s) 929, 1611, 2205
BmsI GCATC 4 cut(s) 1695, 1952, 2063, 2167
BmtI GCTAGC 1 cut(s) 1670
BmuI ACTGGG 3 cut(s) 929, 1611, 2205
BoxI GACNNNNGTC 1 cut(s) 333
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 558
BpuEI CTTGAG 2 cut(s) 1454, 1946
BpuMI CCSGG 1 cut(s) 2059
Bsa29I ATCGAT 2 cut(s) 832, 2145
BsaJI CCNNGG 6 cut(s) 157, 218, 219, 237, 694, 2058
BsaXI ACNNNNNCTCC 2 cut(s) 27, 57
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 483, 1622, 1646, 1848, 1939
Bse1I ACTGG 6 cut(s) 25, 672, 935, 1617, 1632, 2200
Bse3DI GCAATG 2 cut(s) 1269, 1355
BseBI CCWGG 5 cut(s) 220, 404, 1641, 2135, 2219
BseCI ATCGAT 2 cut(s) 832, 2145
BseDI CCNNGG 6 cut(s) 157, 218, 219, 237, 694, 2058
BseGI GGATG 2 cut(s) 79, 2054
BseLI CCNNNNNNNGG 6 cut(s) 163, 483, 1622, 1646, 1848, 1939
BseMI GCAATG 2 cut(s) 1269, 1355
BseMII CTCAG 2 cut(s) 901, 1653
BseNI ACTGG 6 cut(s) 25, 672, 935, 1617, 1632, 2200
BseRI GAGGAG 3 cut(s) 92, 434, 1457
BseSI GKGCMC 1 cut(s) 1448
BseXI GCAGC 8 cut(s) 67, 151, 454, 994, 1090, 1093, 1523, 2142
BseYI CCCAGC 2 cut(s) 1283, 1488
BshFI GGCC 5 cut(s) 83, 1081, 1127, 1650, 2004
BshNI GGYRCC 1 cut(s) 1636
BshVI ATCGAT 2 cut(s) 832, 2145
BsiHKAI GWGCWC 1 cut(s) 515
BsiHKCI CYCGRG 1 cut(s) 236
BsiSI CCGG 2 cut(s) 1921, 2058
BslFI GGGAC 8 cut(s) 507, 910, 923, 1336, 1599, 1757, 1915, 2075
BslI CCNNNNNNNGG 6 cut(s) 163, 483, 1622, 1646, 1848, 1939
BsmFI GGGAC 8 cut(s) 507, 910, 923, 1336, 1599, 1757, 1915, 2075
BsnI GGCC 5 cut(s) 83, 1081, 1127, 1650, 2004
BsoBI CYCGRG 1 cut(s) 236
Bsp1286I GDGCHC 2 cut(s) 515, 1448
Bsp1407I TGTACA 3 cut(s) 1198, 1656, 1766
Bsp19I CCATGG 1 cut(s) 694
BspACI CCGC 3 cut(s) 1684, 1786, 1801
BspANI GGCC 5 cut(s) 83, 1081, 1127, 1650, 2004
BspCNI CTCAG 2 cut(s) 900, 1654
BspDI ATCGAT 2 cut(s) 832, 2145
BspHI TCATGA 2 cut(s) 1017, 1374
BspLI GGNNCC 5 cut(s) 1494, 1615, 1638, 1790, 1810
BspMAI CTGCAG 1 cut(s) 141
BspMI ACCTGC 1 cut(s) 1723
BspOI GCTAGC 1 cut(s) 1670
BspPI GGATC 5 cut(s) 57, 227, 547, 614, 2018
BspQI GCTCTTC 3 cut(s) 445, 503, 1776
BspT107I GGYRCC 1 cut(s) 1636
BsrBI CCGCTC 1 cut(s) 1786
BsrDI GCAATG 2 cut(s) 1269, 1355
BsrGI TGTACA 3 cut(s) 1198, 1656, 1766
BsrI ACTGG 6 cut(s) 25, 672, 935, 1617, 1632, 2200
BssECI CCNNGG 6 cut(s) 157, 218, 219, 237, 694, 2058
BssT1I CCWWGG 2 cut(s) 157, 694
Bst2UI CCWGG 5 cut(s) 220, 404, 1641, 2135, 2219
Bst4CI ACNGT 7 cut(s) 1043, 1220, 1552, 1580, 1771, 2171, 2207
Bst6I CTCTTC 3 cut(s) 445, 503, 1776
BstAPI GCANNNNNTGC 3 cut(s) 914, 1145, 2102
BstAUI TGTACA 3 cut(s) 1198, 1656, 1766
BstC8I GCNNGC 5 cut(s) 144, 1161, 1668, 2076, 2128
BstDEI CTNAG 4 cut(s) 92, 887, 1662, 1986
BstDSI CCRYGG 1 cut(s) 694
BstEII GGTNACC 1 cut(s) 1348
BstENI CCTNNNNNAGG 2 cut(s) 1644, 1937
BstF5I GGATG 2 cut(s) 79, 2054
BstH2I RGCGCY 1 cut(s) 1561
BstHHI GCGC 2 cut(s) 1560, 2096
BstMWI GCNNNNNNNGC 9 cut(s) 64, 914, 1103, 1115, 1124, 1145, 1280, 1987, 2102
BstNI CCWGG 5 cut(s) 220, 404, 1641, 2135, 2219
BstNSI RCATGY 5 cut(s) 380, 500, 772, 966, 1828
BstPAI GACNNNNGTC 1 cut(s) 333
BstPI GGTNACC 1 cut(s) 1348
BstSCI CCNGG 6 cut(s) 218, 402, 1639, 2057, 2133, 2217
BstSFI CTRYAG 3 cut(s) 137, 316, 2206
BstSLI GKGCMC 1 cut(s) 1448
BstV1I GCAGC 8 cut(s) 67, 151, 454, 994, 1090, 1093, 1523, 2142
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 2 cut(s) 539, 1858
BstYI RGATCY 2 cut(s) 539, 1858
Bsu15I ATCGAT 2 cut(s) 832, 2145
BsuRI GGCC 5 cut(s) 83, 1081, 1127, 1650, 2004
BsuTUI ATCGAT 2 cut(s) 832, 2145
BtgI CCRYGG 1 cut(s) 694
BtsCI GGATG 2 cut(s) 79, 2054
BtsI GCAGTG 1 cut(s) 1390
BtsIMutI CAGTG 2 cut(s) 1390, 1659
BveI ACCTGC 1 cut(s) 1723
Cac8I GCNNGC 5 cut(s) 144, 1161, 1668, 2076, 2128
CaiI CAGNNNCTG 1 cut(s) 1955
CciI TCATGA 2 cut(s) 1017, 1374
CfoI GCGC 2 cut(s) 1560, 2096
Cfr13I GGNCC 2 cut(s) 1613, 1808
ClaI ATCGAT 2 cut(s) 832, 2145
CsiI ACCWGGT 1 cut(s) 1639
CspCI CAANNNNNGTGG 2 cut(s) 1465, 1500
DdeI CTNAG 4 cut(s) 92, 887, 1662, 1986
DraI TTTAAA 1 cut(s) 1291
DrdI GACNNNNNNGTC 1 cut(s) 797
DseDI GACNNNNNNGTC 1 cut(s) 797
Eam1104I CTCTTC 3 cut(s) 445, 503, 1776
EarI CTCTTC 3 cut(s) 445, 503, 1776
Eco130I CCWWGG 2 cut(s) 157, 694
Eco147I AGGCCT 1 cut(s) 1650
Eco32I GATATC 2 cut(s) 1506, 2112
Eco47I GGWCC 2 cut(s) 1613, 1808
Eco47III AGCGCT 1 cut(s) 1559
Eco88I CYCGRG 1 cut(s) 236
Eco91I GGTNACC 1 cut(s) 1348
EcoNI CCTNNNNNAGG 2 cut(s) 1644, 1937
EcoO65I GGTNACC 1 cut(s) 1348
EcoRII CCWGG 5 cut(s) 218, 402, 1639, 2133, 2217
EcoRV GATATC 2 cut(s) 1506, 2112
EcoT14I CCWWGG 2 cut(s) 157, 694
EcoT22I ATGCAT 1 cut(s) 502
ErhI CCWWGG 2 cut(s) 157, 694
FaqI GGGAC 8 cut(s) 507, 910, 923, 1336, 1599, 1757, 1915, 2075
FauI CCCGC 1 cut(s) 1691
FbaI TGATCA 2 cut(s) 61, 1030
FblI GTMKAC 2 cut(s) 373, 2040
Fnu4HI GCNGC 8 cut(s) 56, 140, 468, 1008, 1104, 1107, 1512, 2131
FokI GGATG 2 cut(s) 86, 2041
Fsp4HI GCNGC 8 cut(s) 56, 140, 468, 1008, 1104, 1107, 1512, 2131
FspBI CTAG 1 cut(s) 1667
GlaI GCGC 2 cut(s) 1559, 2095
GluI GCNGC 8 cut(s) 56, 140, 468, 1008, 1104, 1107, 1512, 2131
GsaI CCCAGC 2 cut(s) 1287, 1492
GsuI CTGGAG 1 cut(s) 558
HaeII RGCGCY 1 cut(s) 1561
HaeIII GGCC 5 cut(s) 83, 1081, 1127, 1650, 2004
HapII CCGG 2 cut(s) 1921, 2058
HhaI GCGC 2 cut(s) 1560, 2096
Hin6I GCGC 2 cut(s) 1558, 2094
HinP1I GCGC 2 cut(s) 1558, 2094
HincII GTYRAC 1 cut(s) 374
HindII GTYRAC 1 cut(s) 374
HinfI GANTC 9 cut(s) 565, 571, 1120, 1188, 1600, 1928, 1952, 2063, 2081
HpaII CCGG 2 cut(s) 1921, 2058
HphI GGTGA 5 cut(s) 464, 562, 1214, 1360, 1696
Hpy166II GTNNAC 7 cut(s) 374, 681, 1039, 1576, 1657, 1659, 2041
Hpy188I TCNGA 5 cut(s) 570, 627, 1030, 1951, 1957
Hpy188III TCNNGA 9 cut(s) 236, 532, 751, 1018, 1064, 1238, 1375, 1995, 2161
Hpy8I GTNNAC 7 cut(s) 374, 681, 1039, 1576, 1657, 1659, 2041
Hpy99I CGWCG 1 cut(s) 662
HpyAV CCTTC 4 cut(s) 838, 987, 992, 1766
HpyCH4III ACNGT 7 cut(s) 1043, 1220, 1552, 1580, 1771, 2171, 2207
HpyCH4IV ACGT 3 cut(s) 303, 798, 1205
HpyF10VI GCNNNNNNNGC 9 cut(s) 64, 914, 1103, 1115, 1124, 1145, 1280, 1987, 2102
HpyF3I CTNAG 4 cut(s) 92, 887, 1662, 1986
HpySE526I ACGT 3 cut(s) 303, 798, 1205
HspAI GCGC 2 cut(s) 1558, 2094
KpnI GGTACC 1 cut(s) 1640
Ksp22I TGATCA 2 cut(s) 61, 1030
LguI GCTCTTC 3 cut(s) 445, 503, 1776
LmnI GCTCC 3 cut(s) 35, 251, 421
Lsp1109I GCAGC 8 cut(s) 67, 151, 454, 994, 1090, 1093, 1523, 2142
LweI GCATC 4 cut(s) 1695, 1952, 2063, 2167
MabI ACCWGGT 1 cut(s) 1639
MaeI CTAG 1 cut(s) 1667
MaeII ACGT 3 cut(s) 303, 798, 1205
MaeIII GTNAC 5 cut(s) 363, 617, 1220, 1276, 1348
MbiI CCGCTC 1 cut(s) 1786
MfeI CAATTG 1 cut(s) 729
MflI RGATCY 2 cut(s) 539, 1858
MhlI GDGCHC 2 cut(s) 515, 1448
MlyI GAGTC 6 cut(s) 565, 1129, 1197, 1937, 1946, 2057
MmeI TCCRAC 2 cut(s) 468, 842
Mph1103I ATGCAT 1 cut(s) 502
MseI TTAA 7 cut(s) 245, 387, 803, 840, 1155, 1245, 1290
MslI CAYNNNNRTG 1 cut(s) 1274
MspA1I CMGCKG 2 cut(s) 1283, 2078
MspI CCGG 2 cut(s) 1921, 2058
MspR9I CCNGG 6 cut(s) 220, 404, 1641, 2059, 2135, 2219
MunI CAATTG 1 cut(s) 729
MvaI CCWGG 5 cut(s) 220, 404, 1641, 2135, 2219
MwoI GCNNNNNNNGC 9 cut(s) 64, 914, 1103, 1115, 1124, 1145, 1280, 1987, 2102
NciI CCSGG 1 cut(s) 2059
NcoI CCATGG 1 cut(s) 694
NheI GCTAGC 1 cut(s) 1666
NlaIV GGNNCC 5 cut(s) 1494, 1615, 1638, 1790, 1810
NmuCI GTSAC 4 cut(s) 617, 1220, 1276, 1348
NsiI ATGCAT 1 cut(s) 502
NspI RCATGY 5 cut(s) 380, 500, 772, 966, 1828
PagI TCATGA 2 cut(s) 1017, 1374
PasI CCCWGGG 1 cut(s) 219
PceI AGGCCT 1 cut(s) 1650
PciI ACATGT 2 cut(s) 962, 1824
PciSI GCTCTTC 3 cut(s) 445, 503, 1776
PcsI WCGNNNNNNNCGW 2 cut(s) 309, 795
PfeI GAWTC 3 cut(s) 565, 1600, 2081
PflFI GACNNNGTC 1 cut(s) 1611
PflMI CCANNNNNTGG 1 cut(s) 483
PkrI GCNGC 8 cut(s) 57, 141, 469, 1009, 1105, 1108, 1513, 2132
PleI GAGTC 6 cut(s) 565, 1128, 1196, 1936, 1946, 2057
PpsI GAGTC 6 cut(s) 565, 1128, 1196, 1936, 1946, 2057
PscI ACATGT 2 cut(s) 962, 1824
PshAI GACNNNNGTC 1 cut(s) 333
Psp6I CCWGG 5 cut(s) 218, 402, 1639, 2133, 2217
PspEI GGTNACC 1 cut(s) 1348
PspFI CCCAGC 2 cut(s) 1283, 1488
PspGI CCWGG 5 cut(s) 218, 402, 1639, 2133, 2217
PspN4I GGNNCC 5 cut(s) 1494, 1615, 1638, 1790, 1810
PspPI GGNCC 2 cut(s) 1613, 1808
PstI CTGCAG 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 1955
PsuI RGATCY 2 cut(s) 539, 1858
PsyI GACNNNGTC 1 cut(s) 1611
PvuII CAGCTG 2 cut(s) 1283, 2078
RseI CAYNNNNRTG 1 cut(s) 1274
SalI GTCGAC 1 cut(s) 372
SapI GCTCTTC 3 cut(s) 445, 503, 1776
SaqAI TTAA 7 cut(s) 245, 387, 803, 840, 1155, 1245, 1290
SatI GCNGC 8 cut(s) 56, 140, 468, 1008, 1104, 1107, 1512, 2131
Sau96I GGNCC 2 cut(s) 1613, 1808
SchI GAGTC 6 cut(s) 565, 1129, 1197, 1937, 1946, 2057
ScrFI CCNGG 6 cut(s) 220, 404, 1641, 2059, 2135, 2219
SduI GDGCHC 2 cut(s) 515, 1448
SexAI ACCWGGT 1 cut(s) 1639
SfaNI GCATC 4 cut(s) 1695, 1952, 2063, 2167
SfcI CTRYAG 3 cut(s) 137, 316, 2206
SinI GGWCC 2 cut(s) 1613, 1808
SmiMI CAYNNNNRTG 1 cut(s) 1274
SmlI CTYRAG 2 cut(s) 1469, 1925
SmoI CTYRAG 2 cut(s) 1469, 1925
SseBI AGGCCT 1 cut(s) 1650
SsiI CCGC 3 cut(s) 1684, 1786, 1801
SspMI CTAG 1 cut(s) 1667
StuI AGGCCT 1 cut(s) 1650
StyD4I CCNGG 6 cut(s) 218, 402, 1639, 2057, 2133, 2217
StyI CCWWGG 2 cut(s) 157, 694
TaaI ACNGT 7 cut(s) 1043, 1220, 1552, 1580, 1771, 2171, 2207
TaiI ACGT 3 cut(s) 306, 801, 1208
TaqI TCGA 5 cut(s) 122, 373, 789, 832, 2145
TatI WGTACW 4 cut(s) 1198, 1462, 1656, 1766
TfiI GAWTC 3 cut(s) 565, 1600, 2081
Tru1I TTAA 7 cut(s) 245, 387, 803, 840, 1155, 1245, 1290
Tru9I TTAA 7 cut(s) 245, 387, 803, 840, 1155, 1245, 1290
TscAI CASTG 2 cut(s) 1397, 1666
TseFI GTSAC 4 cut(s) 617, 1220, 1276, 1348
TseI GCWGC 8 cut(s) 55, 139, 467, 1007, 1103, 1106, 1511, 2130
Tsp45I GTSAC 4 cut(s) 617, 1220, 1276, 1348
TspDTI ATGAA 6 cut(s) 27, 521, 1034, 1712, 1900, 2076
TspGWI ACGGA 2 cut(s) 605, 1820
TspRI CASTG 2 cut(s) 1397, 1666
Tth111I GACNNNGTC 1 cut(s) 1611
Van91I CCANNNNNTGG 1 cut(s) 483
VpaK11BI GGWCC 2 cut(s) 1613, 1808
XagI CCTNNNNNAGG 2 cut(s) 1644, 1937
XapI RAATTY 5 cut(s) 117, 785, 1071, 1816, 2232
XceI RCATGY 5 cut(s) 380, 500, 772, 966, 1828
XcmI CCANNNNNNNNNTGG 3 cut(s) 484, 1245, 1624
XmiI GTMKAC 2 cut(s) 373, 2040
XspI CTAG 1 cut(s) 1667
Zsp2I ATGCAT 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.