RchiOBHm_Chr5g0020491

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000477
Physical Location & Seq
Forward (+)
14706730 .. 14709280
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30058

Sequence Viewer

Length: 1713 bp
ATGCTGGTACTACTGTTTACAGTGCAACACCATGGTACAGACAAAGTTGTTTGGTTGTTTGCACCAATAGTGCTCCTTTGGTTTCTCTTAATAGGAGGGATTGGCTTGTTCAACATTTGGAAATATGATAGTACCGTTCTAAAAGCTTTTTCACCTATGTATGTATATCGATTTTTTAAGAGGGGAGGAAAAGACGGTTGGACATCTCTAGGAGGTATTATGCTTACCATAACAGGAACAGAAGCACTCTTTGCTGACCTCTCCCATTTCCCAGTCCCGTCAATACAGATAGCTTTCACATCAGTTGTATTTCCTTGCCTTCTTTTAGCATATTCTGGTCAGGCTGCCTATCTCATGAAGAATTCTGATAATGTGTTAAACGCTTTTTACCATTCTATTCCAGACAGCATATATTGGCCAGTGTTTATAGTTGCTACTGCAGCTGCTGTTGTTGCAAGTCAGTCCACCATAACCGCAACTTTTTCACTAATCAAGCAGGCACTTGCACTTGGCTGTTTCCCAAGGGTCAAAGTTGTACATACATCAAAGAAGTACCGTCACCACATATATATTCCAGAAGTTAATTGGCTTGTTATGATTCTCTGCATTGTTGTAACAGCTGGCTTTAAAAATCAAAACCAAATTGGTAACGCCTCCGGGACGGCGGTTTGTATAGTCATGTTGGTAACCACATTGCTTATGATTTTGGTCATGATATTGGTCTGGCGCTGCCATTTGATTCTTGTCCTCCTCTTCACTGGTTTATCACTACTAATAGAGGGCACTTACTTCTCTGCTGTACTCCTCAAGGTCAATCAAGGAGGCTGGGTTCCTCTTGTGATCTCAGCAGCCTTCTTTATTGTTATGTATGCTTGGCATTATGGTACAGTAAAACGTTACGAGATTGAAGTCCACAGTAAGGTCTCGATGGCATGGATTCTCGGACTTGGTCCCAGTTTAGGATTGGTTCGTGTACCTGGGATAGGCCTTGTGTACACTGAGCTAGCAAGTGGAGTGCCTCGCATCTTTTCTCACTTGATCACCAACCTACCCGCCATCCATAATGTTGTTGTCTTTGTCTGTGTGAAGTACCTTCCTGTCTACACAGTCCAAGAAGAAGAAAGGTTCCTTGTAAAGCGGATTGGCCCAAAGAATTTCCACATGTTTCGCTGCGTTGCAAGATATGGCTATAAAGACATCCACACAAAAGATGACGATTTTGAGAAAAAACTCTTTGCCAGTCTTTTCTTGTTTCTCCTGGTAGAGTCATTGGCAGAACCATCTTCTGGCTCTGATATATCTAGTTTACTTGGTCAGCAAACTAGGCAATCAAGAAGTAGCACGTTCAATAGTATCAGCAACATACCTTACTCCACCGCAGACCTGTCAATTCAGTCGAATGACTCAATCGTCCCGGGTGGTTCTCCACTTCATGAAAACAACACTTTGACATTCTCTGATATTCAGCCAAGCAGCCAGGTGGTCGAAGACGAGATTGATGAGACTGAGTACTTGAACAACTGTAGAGATGTAGGGGTGGTGCACATACTTGGAAACACTGTAGTGAGAGCCAGCAGGAACTCAAACTTTTGGAAGAGAATAACTATTGATTACCTATATGCATTTCTTAGGAAGATATGTTGGGGAAACAGTGTAATGCTTAATGTTCCTCATGAGAGTCTCTTGAATGTTGGGCAGGTATTATATGTATGA

Protein Analysis

570

Amino Acids

63.69

Weight (kDa)

8.68

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 2 - 313 5.4e-108 K+ potassium transporter integral membrane domain
K_trans_C PF22776 326 - 567 5.3e-22 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1409
Acc36I ACCTGC 1 cut(s) 1687
AccB7I CCANNNNNTGG 1 cut(s) 1286
AccI GTMKAC 1 cut(s) 1101
AciI CCGC 5 cut(s) 474, 665, 1053, 1138, 1377
AclI AACGTT 1 cut(s) 895
AcoI YGGCCR 1 cut(s) 416
AcsI RAATTY 2 cut(s) 361, 1153
AfiI CCNNNNNNNGG 4 cut(s) 919, 959, 983, 1286
AflIII ACRYGT 1 cut(s) 1161
AgsI TTSAA 5 cut(s) 112, 908, 1348, 1516, 1687
AjnI CCWGG 3 cut(s) 976, 1257, 1476
AjuI GAANNNNNNNTTGG 2 cut(s) 181, 213
AleI CACNNNNGTG 1 cut(s) 1562
AloI GAACNNNNNNTCC 2 cut(s) 813, 845
AluBI AGCT 5 cut(s) 146, 293, 443, 620, 1003
AluI AGCT 5 cut(s) 146, 293, 443, 620, 1003
Alw21I GWGCWC 2 cut(s) 75, 1545
Alw26I GTCTC 3 cut(s) 928, 1496, 1685
Alw44I GTGCAC 1 cut(s) 1541
AlwNI CAGNNNCTG 1 cut(s) 446
Ama87I CYCGRG 1 cut(s) 1414
AoxI GGCC 3 cut(s) 416, 985, 1144
ApaLI GTGCAC 1 cut(s) 1541
ApeKI GCWGC 7 cut(s) 344, 440, 443, 729, 848, 1170, 1473
ApoI RAATTY 2 cut(s) 361, 1153
AspLEI GCGC 1 cut(s) 729
AspS9I GGNCC 2 cut(s) 950, 1145
AsuC2I CCSGG 3 cut(s) 658, 1415, 1416
AsuHPI GGTGA 3 cut(s) 144, 551, 1033
AsuNHI GCTAGC 1 cut(s) 1003
AvaI CYCGRG 1 cut(s) 1414
AvaII GGWCC 1 cut(s) 950
BaeGI GKGCMC 2 cut(s) 785, 1545
BaeI ACNNNNGTAYC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 418
BbsI GAAGAC 1 cut(s) 1494
Bbv12I GWGCWC 2 cut(s) 75, 1545
BbvI GCAGC 7 cut(s) 331, 430, 452, 716, 860, 1157, 1485
BccI CCATC 3 cut(s) 922, 1064, 1288
BceAI ACGGC 1 cut(s) 678
BciT130I CCWGG 3 cut(s) 978, 1259, 1478
BclI TGATCA 1 cut(s) 1038
BcnI CCSGG 3 cut(s) 658, 1415, 1416
BcoDI GTCTC 3 cut(s) 928, 1496, 1685
BfaI CTAG 4 cut(s) 209, 1004, 1302, 1323
BfmI CTRYAG 3 cut(s) 438, 1522, 1560
BfoI RGCGCY 1 cut(s) 730
BfuAI ACCTGC 1 cut(s) 1687
BisI GCNGC 7 cut(s) 345, 441, 444, 730, 849, 1171, 1474
BlsI GCNGC 7 cut(s) 346, 442, 445, 731, 850, 1172, 1475
BmcAI AGTACT 1 cut(s) 1511
Bme1390I CCNGG 6 cut(s) 658, 978, 1259, 1415, 1416, 1478
Bme18I GGWCC 1 cut(s) 950
BmeT110I CYCGRG 1 cut(s) 1414
BmgT120I GGNCC 2 cut(s) 950, 1145
BmiI GGNNCC 3 cut(s) 831, 952, 1127
BmrFI CCNGG 6 cut(s) 658, 978, 1259, 1415, 1416, 1478
BmrI ACTGGG 2 cut(s) 266, 948
BmsI GCATC 1 cut(s) 1032
BmtI GCTAGC 1 cut(s) 1007
BmuI ACTGGG 2 cut(s) 266, 948
BpiI GAAGAC 1 cut(s) 1494
BpuEI CTTGAG 1 cut(s) 791
BpuMI CCSGG 3 cut(s) 658, 1415, 1416
Bsa29I ATCGAT 1 cut(s) 169
BsaI GGTCTC 1 cut(s) 928
BsaJI CCNNGG 4 cut(s) 31, 521, 977, 1414
BsaXI ACNNNNNCTCC 2 cut(s) 813, 843
Bsc4I CCNNNNNNNGG 4 cut(s) 919, 959, 983, 1286
Bse1I ACTGG 5 cut(s) 272, 419, 763, 954, 1239
Bse3DI GCAATG 1 cut(s) 692
BseBI CCWGG 3 cut(s) 978, 1259, 1478
BseCI ATCGAT 1 cut(s) 169
BseDI CCNNGG 4 cut(s) 31, 521, 977, 1414
BseGI GGATG 2 cut(s) 1056, 1197
BseLI CCNNNNNNNGG 4 cut(s) 919, 959, 983, 1286
BseMI GCAATG 1 cut(s) 692
BseMII CTCAG 3 cut(s) 858, 990, 1497
BseNI ACTGG 5 cut(s) 272, 419, 763, 954, 1239
BseRI GAGGAG 2 cut(s) 740, 794
BseSI GKGCMC 2 cut(s) 785, 1545
BseXI GCAGC 7 cut(s) 331, 430, 452, 716, 860, 1157, 1485
BseYI CCCAGC 1 cut(s) 825
BshFI GGCC 3 cut(s) 418, 987, 1146
BshVI ATCGAT 1 cut(s) 169
BsiHKAI GWGCWC 2 cut(s) 75, 1545
BsiHKCI CYCGRG 1 cut(s) 1414
BsiSI CCGG 2 cut(s) 657, 1415
BslFI GGGAC 4 cut(s) 260, 673, 936, 1397
BslI CCNNNNNNNGG 4 cut(s) 919, 959, 983, 1286
BsmAI GTCTC 3 cut(s) 928, 1496, 1685
BsmFI GGGAC 4 cut(s) 260, 673, 936, 1397
BsnI GGCC 3 cut(s) 418, 987, 1146
Bso31I GGTCTC 1 cut(s) 928
BsoBI CYCGRG 1 cut(s) 1414
Bsp1286I GDGCHC 3 cut(s) 75, 785, 1545
Bsp1407I TGTACA 2 cut(s) 535, 993
Bsp143I GATC 2 cut(s) 840, 1038
Bsp19I CCATGG 1 cut(s) 31
BspACI CCGC 5 cut(s) 474, 665, 1053, 1138, 1377
BspANI GGCC 3 cut(s) 418, 987, 1146
BspCNI CTCAG 3 cut(s) 857, 991, 1498
BspDI ATCGAT 1 cut(s) 169
BspHI TCATGA 4 cut(s) 354, 711, 1432, 1672
BspLI GGNNCC 3 cut(s) 831, 952, 1127
BspMAI CTGCAG 1 cut(s) 442
BspMI ACCTGC 1 cut(s) 1687
BspOI GCTAGC 1 cut(s) 1007
BspTNI GGTCTC 1 cut(s) 928
BsrDI GCAATG 1 cut(s) 692
BsrGI TGTACA 2 cut(s) 535, 993
BsrI ACTGG 5 cut(s) 272, 419, 763, 954, 1239
BssECI CCNNGG 4 cut(s) 31, 521, 977, 1414
BssMI GATC 2 cut(s) 840, 1038
BssT1I CCWWGG 2 cut(s) 31, 521
Bst2UI CCWGG 3 cut(s) 978, 1259, 1478
Bst6I CTCTTC 2 cut(s) 758, 1589
BstAPI GCANNNNNTGC 1 cut(s) 251
BstAUI TGTACA 2 cut(s) 535, 993
BstC8I GCNNGC 4 cut(s) 498, 622, 1005, 1573
BstDEI CTNAG 4 cut(s) 844, 999, 1506, 1628
BstDSI CCRYGG 1 cut(s) 31
BstEII GGTNACC 1 cut(s) 685
BstENI CCTNNNNNAGG 1 cut(s) 981
BstF5I GGATG 2 cut(s) 1056, 1197
BstH2I RGCGCY 1 cut(s) 730
BstHHI GCGC 1 cut(s) 729
BstKTI GATC 2 cut(s) 843, 1041
BstMAI GTCTC 3 cut(s) 928, 1496, 1685
BstMBI GATC 2 cut(s) 840, 1038
BstMWI GCNNNNNNNGC 4 cut(s) 251, 440, 452, 1324
BstNI CCWGG 3 cut(s) 978, 1259, 1478
BstNSI RCATGY 1 cut(s) 1165
BstPI GGTNACC 1 cut(s) 685
BstSCI CCNGG 6 cut(s) 656, 976, 1257, 1413, 1414, 1476
BstSFI CTRYAG 3 cut(s) 438, 1522, 1560
BstSLI GKGCMC 2 cut(s) 785, 1545
BstV1I GCAGC 7 cut(s) 331, 430, 452, 716, 860, 1157, 1485
BstV2I GAAGAC 1 cut(s) 1494
Bsu15I ATCGAT 1 cut(s) 169
BsuRI GGCC 3 cut(s) 418, 987, 1146
BsuTUI ATCGAT 1 cut(s) 169
BtgI CCRYGG 1 cut(s) 31
BtsCI GGATG 2 cut(s) 1056, 1197
BtsIMutI CAGTG 6 cut(s) 27, 426, 756, 996, 1557, 1657
BveI ACCTGC 1 cut(s) 1687
Cac8I GCNNGC 4 cut(s) 498, 622, 1005, 1573
CaiI CAGNNNCTG 1 cut(s) 446
CciI TCATGA 4 cut(s) 354, 711, 1432, 1672
CfoI GCGC 1 cut(s) 729
Cfr13I GGNCC 2 cut(s) 950, 1145
Cfr9I CCCGGG 1 cut(s) 1414
ClaI ATCGAT 1 cut(s) 169
CviAII CATG 8 cut(s) 32, 355, 679, 712, 933, 1162, 1433, 1673
DdeI CTNAG 4 cut(s) 844, 999, 1506, 1628
DpnI GATC 2 cut(s) 842, 1040
DpnII GATC 2 cut(s) 840, 1038
DraI TTTAAA 1 cut(s) 628
DrdI GACNNNNNNGTC 1 cut(s) 1409
DseDI GACNNNNNNGTC 1 cut(s) 1409
EaeI YGGCCR 1 cut(s) 416
Eam1104I CTCTTC 2 cut(s) 758, 1589
EarI CTCTTC 2 cut(s) 758, 1589
Eco130I CCWWGG 2 cut(s) 31, 521
Eco147I AGGCCT 1 cut(s) 987
Eco31I GGTCTC 1 cut(s) 928
Eco47I GGWCC 1 cut(s) 950
Eco88I CYCGRG 1 cut(s) 1414
Eco91I GGTNACC 1 cut(s) 685
EcoNI CCTNNNNNAGG 1 cut(s) 981
EcoO65I GGTNACC 1 cut(s) 685
EcoRI GAATTC 1 cut(s) 361
EcoRII CCWGG 3 cut(s) 976, 1257, 1476
EcoT14I CCWWGG 2 cut(s) 31, 521
EcoT22I ATGCAT 1 cut(s) 1624
ErhI CCWWGG 2 cut(s) 31, 521
FaeI CATG 8 cut(s) 35, 358, 682, 715, 936, 1165, 1436, 1676
FaqI GGGAC 4 cut(s) 260, 673, 936, 1397
FatI CATG 8 cut(s) 31, 354, 678, 711, 932, 1161, 1432, 1672
FauI CCCGC 1 cut(s) 1060
FbaI TGATCA 1 cut(s) 1038
FblI GTMKAC 1 cut(s) 1101
Fnu4HI GCNGC 7 cut(s) 345, 441, 444, 730, 849, 1171, 1474
FokI GGATG 2 cut(s) 1043, 1184
Fsp4HI GCNGC 7 cut(s) 345, 441, 444, 730, 849, 1171, 1474
FspBI CTAG 4 cut(s) 209, 1004, 1302, 1323
GlaI GCGC 1 cut(s) 728
GluI GCNGC 7 cut(s) 345, 441, 444, 730, 849, 1171, 1474
GsaI CCCAGC 1 cut(s) 829
HaeII RGCGCY 1 cut(s) 730
HaeIII GGCC 3 cut(s) 418, 987, 1146
HapII CCGG 2 cut(s) 657, 1415
HhaI GCGC 1 cut(s) 729
Hin1II CATG 8 cut(s) 35, 358, 682, 715, 936, 1165, 1436, 1676
Hin6I GCGC 1 cut(s) 727
HinP1I GCGC 1 cut(s) 727
HindIII AAGCTT 1 cut(s) 144
HinfI GANTC 6 cut(s) 598, 739, 937, 1265, 1403, 1678
HpaII CCGG 2 cut(s) 657, 1415
HphI GGTGA 3 cut(s) 144, 551, 1033
Hpy166II GTNNAC 9 cut(s) 18, 465, 913, 974, 994, 996, 1102, 1307, 1543
Hpy188I TCNGA 4 cut(s) 367, 944, 1294, 1459
Hpy188III TCNNGA 9 cut(s) 355, 401, 575, 712, 925, 1332, 1433, 1673, 1684
Hpy8I GTNNAC 9 cut(s) 18, 465, 913, 974, 994, 996, 1102, 1307, 1543
HpyAV CCTTC 3 cut(s) 329, 862, 1103
HpyCH4IV ACGT 2 cut(s) 895, 1343
HpyCH4V TGCA 9 cut(s) 25, 62, 440, 455, 506, 606, 1178, 1543, 1622
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 440, 452, 1324
HpyF3I CTNAG 4 cut(s) 844, 999, 1506, 1628
HpySE526I ACGT 2 cut(s) 895, 1343
Hsp92II CATG 8 cut(s) 35, 358, 682, 715, 936, 1165, 1436, 1676
HspAI GCGC 1 cut(s) 727
Ksp22I TGATCA 1 cut(s) 1038
Kzo9I GATC 2 cut(s) 840, 1038
LmnI GCTCC 1 cut(s) 78
Lsp1109I GCAGC 7 cut(s) 331, 430, 452, 716, 860, 1157, 1485
LweI GCATC 1 cut(s) 1032
MaeI CTAG 4 cut(s) 209, 1004, 1302, 1323
MaeII ACGT 2 cut(s) 895, 1343
MaeIII GTNAC 5 cut(s) 557, 613, 647, 685, 896
MalI GATC 2 cut(s) 842, 1040
MboI GATC 2 cut(s) 840, 1038
MboII GAAGA 8 cut(s) 370, 745, 1127, 1130, 1275, 1499, 1606, 1645
MhlI GDGCHC 3 cut(s) 75, 785, 1545
MlsI TGGCCA 1 cut(s) 418
MluCI AATT 5 cut(s) 361, 583, 642, 1153, 1389
MluNI TGGCCA 1 cut(s) 418
MlyI GAGTC 3 cut(s) 1274, 1397, 1687
MmeI TCCRAC 1 cut(s) 179
Mox20I TGGCCA 1 cut(s) 418
Mph1103I ATGCAT 1 cut(s) 1624
MscI TGGCCA 1 cut(s) 418
MseI TTAA 6 cut(s) 89, 177, 377, 582, 627, 1662
MslI CAYNNNNRTG 1 cut(s) 1562
Msp20I TGGCCA 1 cut(s) 418
MspA1I CMGCKG 2 cut(s) 443, 620
MspI CCGG 2 cut(s) 657, 1415
MspR9I CCNGG 6 cut(s) 658, 978, 1259, 1415, 1416, 1478
MvaI CCWGG 3 cut(s) 978, 1259, 1478
MwoI GCNNNNNNNGC 4 cut(s) 251, 440, 452, 1324
NciI CCSGG 3 cut(s) 658, 1415, 1416
NcoI CCATGG 1 cut(s) 31
NdeII GATC 2 cut(s) 840, 1038
NheI GCTAGC 1 cut(s) 1003
NlaIII CATG 8 cut(s) 35, 358, 682, 715, 936, 1165, 1436, 1676
NlaIV GGNNCC 3 cut(s) 831, 952, 1127
NmuCI GTSAC 1 cut(s) 557
NsiI ATGCAT 1 cut(s) 1624
NspI RCATGY 1 cut(s) 1165
OliI CACNNNNGTG 1 cut(s) 1562
PagI TCATGA 4 cut(s) 354, 711, 1432, 1672
PceI AGGCCT 1 cut(s) 987
PciI ACATGT 1 cut(s) 1161
PfeI GAWTC 3 cut(s) 598, 739, 937
PflFI GACNNNGTC 1 cut(s) 948
PflMI CCANNNNNTGG 1 cut(s) 1286
PfoI TCCNGGA 1 cut(s) 656
PkrI GCNGC 7 cut(s) 346, 442, 445, 731, 850, 1172, 1475
PleI GAGTC 3 cut(s) 1273, 1397, 1686
PpsI GAGTC 3 cut(s) 1273, 1397, 1686
PscI ACATGT 1 cut(s) 1161
Psp1406I AACGTT 1 cut(s) 895
Psp6I CCWGG 3 cut(s) 976, 1257, 1476
PspEI GGTNACC 1 cut(s) 685
PspFI CCCAGC 1 cut(s) 825
PspGI CCWGG 3 cut(s) 976, 1257, 1476
PspN4I GGNNCC 3 cut(s) 831, 952, 1127
PspPI GGNCC 2 cut(s) 950, 1145
PstI CTGCAG 1 cut(s) 442
PstNI CAGNNNCTG 1 cut(s) 446
PsyI GACNNNGTC 1 cut(s) 948
PvuII CAGCTG 2 cut(s) 443, 620
RseI CAYNNNNRTG 1 cut(s) 1562
SaqAI TTAA 6 cut(s) 89, 177, 377, 582, 627, 1662
SatI GCNGC 7 cut(s) 345, 441, 444, 730, 849, 1171, 1474
Sau3AI GATC 2 cut(s) 840, 1038
Sau96I GGNCC 2 cut(s) 950, 1145
ScaI AGTACT 1 cut(s) 1511
SchI GAGTC 3 cut(s) 1274, 1397, 1687
ScrFI CCNGG 6 cut(s) 658, 978, 1259, 1415, 1416, 1478
SduI GDGCHC 3 cut(s) 75, 785, 1545
SfaNI GCATC 1 cut(s) 1032
SfcI CTRYAG 3 cut(s) 438, 1522, 1560
SinI GGWCC 1 cut(s) 950
SmaI CCCGGG 1 cut(s) 1416
SmiMI CAYNNNNRTG 1 cut(s) 1562
SmlI CTYRAG 1 cut(s) 806
SmoI CTYRAG 1 cut(s) 806
Sse9I AATT 5 cut(s) 361, 583, 642, 1153, 1389
SseBI AGGCCT 1 cut(s) 987
SsiI CCGC 5 cut(s) 474, 665, 1053, 1138, 1377
SspMI CTAG 4 cut(s) 209, 1004, 1302, 1323
StuI AGGCCT 1 cut(s) 987
StyD4I CCNGG 6 cut(s) 656, 976, 1257, 1413, 1414, 1476
StyI CCWWGG 2 cut(s) 31, 521
TaiI ACGT 2 cut(s) 898, 1346
TaqI TCGA 4 cut(s) 169, 926, 1397, 1485
TasI AATT 5 cut(s) 361, 583, 642, 1153, 1389
TatI WGTACW 4 cut(s) 535, 799, 993, 1509
TfiI GAWTC 3 cut(s) 598, 739, 937
Tru1I TTAA 6 cut(s) 89, 177, 377, 582, 627, 1662
Tru9I TTAA 6 cut(s) 89, 177, 377, 582, 627, 1662
TscAI CASTG 6 cut(s) 27, 426, 763, 1003, 1564, 1657
TseFI GTSAC 1 cut(s) 557
TseI GCWGC 7 cut(s) 344, 440, 443, 729, 848, 1170, 1473
Tsp45I GTSAC 1 cut(s) 557
TspDTI ATGAA 3 cut(s) 371, 1421, 1449
TspMI CCCGGG 1 cut(s) 1414
TspRI CASTG 6 cut(s) 27, 426, 763, 1003, 1564, 1657
Tth111I GACNNNGTC 1 cut(s) 948
Van91I CCANNNNNTGG 1 cut(s) 1286
VneI GTGCAC 1 cut(s) 1541
VpaK11BI GGWCC 1 cut(s) 950
XagI CCTNNNNNAGG 1 cut(s) 981
XapI RAATTY 2 cut(s) 361, 1153
XceI RCATGY 1 cut(s) 1165
XcmI CCANNNNNNNNNTGG 2 cut(s) 582, 961
XmaI CCCGGG 1 cut(s) 1414
XmiI GTMKAC 1 cut(s) 1101
XspI CTAG 4 cut(s) 209, 1004, 1302, 1323
ZrmI AGTACT 1 cut(s) 1511
Zsp2I ATGCAT 1 cut(s) 1624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.