Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000477

Physical Location & Seq

Genomic Coordinates Reverse (-)

79826160 .. 79833291

Gene Structure 7132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00057830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2493 bp

ATGCTGGGACAGATGCATGACAAGATCCTTGAGGAAGCGATACTGAAAGTTCAAACTTTTGCGTCTCTGACTGTTATAAACAGCCAAAAACCGCCTCTGAAACCTGCAGAGAAGAATAAGAAGTCTCAAAGATTCTGTTTCAAGCCTAAGCCTCCCCACTTGGGTTTGCTGAAGAAGTACATGAGTTTGAATCTTTTAGCTTTGATTGATTTTCAGCTTGTCTTGGTGGGAGTCACCAAGGTTGAAGCTTTGGTTTTGGTTCTTTCAGCTTTTGGTGGGTGTCAATTTGTTGAGCTCAGCAAGGGTTGTGTTGAGGGGTTTGAATTCATAGTTCAGCTGGGAATGGTTGTTGGAAGCGAATATGGGAATTTCTTGGTTTTAGTTGGACACAATTTAAGTGTAATACTAGTGACTGTGATAGTGAAATTCTCCTCGCTATTGCTTCTTCGGTTTGCATTCCAAAGTCTTGGAGTGGTTTTTGGAGATTTAGGCACTTCCCCCTTGTATGTTTTCTACAATACATTTCCTCATGGAATTGCAGATCCTGAGGATGTGGTTGGAGCTCTTTCATTGATTATATACTCTCTTACTCTTATCCCACTCATCAAGTACGTATTTGTTGTCTGTCGGGCGAATGACAGCGGGCAAGGTGGAACATTTGCTCTTTATTCATTGCTCTGTCGGCATGCAAAAGTAAAAACTATTCCCAATCAGCACCGGACCGATGAAGAGCTAACAACATATAGTCGTTCTACTTTTCATGAACAATCGTATGCTGCAAAAACCAAGAAGTGGTTGGAGGGACATGCATCAAGGAAGAATGCACTTCTTCTTCTGGTCCTTGTTGGCACTTGTATGGTTATTGGAGATGGGATTCTTACCCCAGCTATATCAGTTTTAATCAAAAGGCTCAATGTGGCACAACGCAGGATTTCTTCCACGCAGAGAAGGAGTTATCCAAACTCCATGATTGCTCTTACCAACAAAGGGGCCATGCCAAGAAGCAAGTGCCTAAATTATGTCATACTTGTAGCCGTTGTGATATTAGTGGGTTTGTTCAGCATGCAGCATTATGGGACAGATAAAGTTGGTTGGCTCTTTGCTCCCATTGTGCTGCTTTGGTTTCTCTTGATCGGAGGTATTGGCATATTCAACATCTGGAAATATGACAGTAGTGTTTTGAGAGCTTTTTCACCTGTGTATATATATCGGTATTTTAAAAGGAATGGGAGAGATGGTTGGACTTCCCTTGGAGGTATTATGCTTAGTATAACAGGGACAGAAGCACTCTTTGCCGACCTTGCCCATTTTCCAGTTTCAGCTGTACAGATTGCTTTTACCACAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGTCAAGCTGCCTTTCTTGTAGTACATCATGATAACAATGAAACTGTGACTCAAGCATTTTATCGTTCTATTCCAGGGACGGCGGTTGTAGTGGTCATGCTGGCAACCACTTTCCTTATGACTCTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTTGTTGTGATATTCACTGGTTTGTCACTGGTTGTGGAGTGCACTTACTTTTCTGCTGTACTCTTCAAGGTTGATCAAGGGGGATGGGTTCCTCTTGTGATTGCAGCTGCCTTTCTTCTCATCATGTATGTATGGCACTATGGTTCGTTGAAACGTTATGAGTTTGAAATGCACAGCAAGGTTTCAATGGCCTGGCTTCTTGGACTTGGCCCCAGTTTAGGACTGGTTCGGGTCCCTGGGGTAGGACTTGTGTATACCGAGCTTGCAAGCGGGGTGCCCCATATCTTTTCCCACTTCATAACCAACCTGCCTGCTATCCATTCTGTTGTTATCTTTGTTTGTGTGAAGTATCTTCCTGTATATACTGTCCCAGAAGAAGAAAGATTCCTTGTAAAGCGGATTGGCCCCAAGAATTTCCACATGTTCCGGTGTGTTGCAAGATATGGTTACAAAGACCTCCACAGAAAAGATGATGACTTTGAGAAAAAGCTGTTTGATAATCTTTTCATGTTTGTCCGACTGGAAGCCATGATGGAAGGGTGTTCAGACTCAGATGAGTACAGTGTATATGGCCAGCAAACCGAGAAATCAAGGGAAATCCTATTAAACAATAATGGAAATACTTCTCCGTCGTTGGGGGACCTTACCATGTCAACAGTGGATGCCATTGTGCCTGTTAGATCTCCGGTGAATAATGCAAGCAACACTGTCTCTTCTCAGATGAGCAACCAGACTGAGATGGATGAGCTAGAATTTATCAATAATTGTAGAGACGCCGGCGTGGTGCATATACTTGGTAATACGGTAGTAAGAGCAAGGAGGGATTCCAGGTTCTACAAGAAGATTGCTGTTGATTATATATATGCATTTCTTAGAAAAGTATGCAGGGAGCACAGTGTGATCTTCAATGTCCCTCATGAGAGTCTCTTGAATGTTGGACAAATTTTCTACGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

830

Amino Acids

92.91

Weight (kDa)

9.07

Isoelectric Point (pI)

39.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	152 - 486	2.4e-86	K+ potassium transporter integral membrane domain
K_trans	PF02705	485 - 577	1.4e-18	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	591 - 827	1.9e-25	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca	FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica	MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica	Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis	pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis	RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata	RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora	Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa	Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha	Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana	Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	77
Acc36I	ACCTGC	2 cut(s)	112, 1851
AccB1I	GGYRCC	1 cut(s)	1810
AccB7I	CCANNNNNTGG	1 cut(s)	792
AccI	GTMKAC	1 cut(s)	1790
AciI	CCGC	5 cut(s)	92, 642, 1460, 1806, 1933
AclI	AACGTT	1 cut(s)	1690
AclWI	GGATC	2 cut(s)	19, 536
AcoI	YGGCCR	1 cut(s)	2107
AcsI	RAATTY	6 cut(s)	323, 367, 425, 1948, 2288, 2478
AcuI	CTGAAG	1 cut(s)	191
AcyI	GRCGYC	1 cut(s)	2310
AdeI	CACNNNGTG	1 cut(s)	2434
AfaI	GTAC	6 cut(s)	179, 611, 1326, 1401, 1596, 2096
AfiI	CCNNNNNNNGG	6 cut(s)	161, 792, 987, 1754, 1778, 2171
AflIII	ACRYGT	2 cut(s)	1956, 2487
AhlI	ACTAGT	1 cut(s)	406
AjnI	CCWGG	4 cut(s)	1450, 1727, 1771, 2363
AleI	CACNNNNGTG	1 cut(s)	1346
AloI	GAACNNNNNNTCC	2 cut(s)	2351, 2383
Alw21I	GWGCWC	4 cut(s)	297, 565, 1580, 2430
Alw26I	GTCTC	5 cut(s)	69, 129, 2251, 2301, 2465
Alw44I	GTGCAC	1 cut(s)	1576
AlwI	GGATC	2 cut(s)	19, 536
AlwNI	CAGNNNCTG	1 cut(s)	545
AoxI	GGCC	5 cut(s)	990, 1725, 1744, 1939, 2107
ApaLI	GTGCAC	1 cut(s)	1576
ApeKI	GCWGC	7 cut(s)	776, 1066, 1114, 1385, 1524, 1640, 1643
ApoI	RAATTY	6 cut(s)	323, 367, 425, 1948, 2288, 2478
Asp700I	GAANNNNTTC	1 cut(s)	2158
AspLEI	GCGC	1 cut(s)	1524
AspS9I	GGNCC	7 cut(s)	720, 838, 990, 1745, 1768, 1940, 2176
AsuHPI	GGTGA	3 cut(s)	226, 1185, 2236
AvaII	GGWCC	4 cut(s)	720, 838, 1768, 2176
AxyI	CCTNAGG	1 cut(s)	546
BaeGI	GKGCMC	2 cut(s)	1580, 1815
BalI	TGGCCA	1 cut(s)	2109
BanI	GGYRCC	1 cut(s)	1810
BanII	GRGCYC	2 cut(s)	297, 565
Bbv12I	GWGCWC	4 cut(s)	297, 565, 1580, 2430
BbvI	GCAGC	7 cut(s)	763, 1078, 1101, 1372, 1511, 1630, 1652
BccI	CCATC	5 cut(s)	863, 1229, 1614, 2062, 2269
BceAI	ACGGC	2 cut(s)	1019, 1473
BciT130I	CCWGG	4 cut(s)	1452, 1729, 1773, 2365
BclI	TGATCA	1 cut(s)	1609
BcoDI	GTCTC	5 cut(s)	69, 129, 2251, 2301, 2465
BcuI	ACTAGT	1 cut(s)	406
BfaI	CTAG	2 cut(s)	407, 2285
BfmI	CTRYAG	1 cut(s)	105
BfoI	RGCGCY	1 cut(s)	1525
BfuAI	ACCTGC	2 cut(s)	112, 1851
BglII	AGATCT	1 cut(s)	2216
BisI	GCNGC	7 cut(s)	777, 1067, 1115, 1386, 1525, 1641, 1644
BlpI	GCTNAGC	1 cut(s)	296
BlsI	GCNGC	7 cut(s)	778, 1068, 1116, 1387, 1526, 1642, 1645
Bme1390I	CCNGG	4 cut(s)	1452, 1729, 1773, 2365
Bme18I	GGWCC	4 cut(s)	720, 838, 1768, 2176
BmgT120I	GGNCC	7 cut(s)	720, 838, 990, 1745, 1768, 1940, 2176
BmiI	GGNNCC	8 cut(s)	991, 1626, 1747, 1769, 1770, 1812, 1942, 2177
BmrFI	CCNGG	4 cut(s)	1452, 1729, 1773, 2365
BmrI	ACTGGG	1 cut(s)	1743
BmsI	GCATC	3 cut(s)	3, 818, 2188
BmuI	ACTGGG	1 cut(s)	1743
Bpu10I	CCTNAGC	1 cut(s)	147
Bpu1102I	GCTNAGC	1 cut(s)	296
BpuEI	CTTGAG	2 cut(s)	50, 1413
BsaAI	YACGTR	2 cut(s)	613, 2488
BsaHI	GRCGYC	1 cut(s)	2310
BsaJI	CCNNGG	5 cut(s)	237, 1249, 1451, 1771, 1772
BsaWI	WCCGGW	3 cut(s)	717, 1962, 2221
BsaXI	ACNNNNNCTCC	2 cut(s)	1222, 1252
Bsc4I	CCNNNNNNNGG	6 cut(s)	161, 792, 987, 1754, 1778, 2171
Bse118I	RCCGGY	1 cut(s)	2312
Bse1I	ACTGG	6 cut(s)	1313, 1558, 1569, 1749, 1764, 2061
Bse21I	CCTNAGG	1 cut(s)	546
Bse3DI	GCAATG	1 cut(s)	671
BseBI	CCWGG	4 cut(s)	1452, 1729, 1773, 2365
BseDI	CCNNGG	5 cut(s)	237, 1249, 1451, 1771, 1772
BseGI	GGATG	4 cut(s)	556, 1625, 2203, 2284
BseLI	CCNNNNNNNGG	6 cut(s)	161, 792, 987, 1754, 1778, 2171
BseMI	GCAATG	1 cut(s)	671
BseMII	CTCAG	5 cut(s)	310, 537, 2100, 2262, 2267
BseNI	ACTGG	6 cut(s)	1313, 1558, 1569, 1749, 1764, 2061
BseRI	GAGGAG	1 cut(s)	421
BseSI	GKGCMC	2 cut(s)	1580, 1815
BseXI	GCAGC	7 cut(s)	763, 1078, 1101, 1372, 1511, 1630, 1652
BseYI	CCCAGC	3 cut(s)	4, 337, 883
BshFI	GGCC	5 cut(s)	992, 1727, 1746, 1941, 2109
BshNI	GGYRCC	1 cut(s)	1810
BsiHKAI	GWGCWC	4 cut(s)	297, 565, 1580, 2430
BsiSI	CCGG	4 cut(s)	718, 1963, 2222, 2313
BslFI	GGGAC	9 cut(s)	21, 816, 1090, 1291, 1468, 1754, 1889, 2189, 2432
BslI	CCNNNNNNNGG	6 cut(s)	161, 792, 987, 1754, 1778, 2171
BsmAI	GTCTC	5 cut(s)	69, 129, 2251, 2301, 2465
BsmBI	CGTCTC	2 cut(s)	69, 2301
BsmFI	GGGAC	9 cut(s)	21, 816, 1090, 1291, 1468, 1754, 1889, 2189, 2432
BsmI	GAATGC	2 cut(s)	455, 826
BsnI	GGCC	5 cut(s)	992, 1727, 1746, 1941, 2109
Bsp1286I	GDGCHC	5 cut(s)	297, 565, 1580, 1815, 2430
Bsp1407I	TGTACA	1 cut(s)	1324
Bsp143I	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
Bsp1720I	GCTNAGC	1 cut(s)	296
BspACI	CCGC	5 cut(s)	92, 642, 1460, 1806, 1933
BspANI	GGCC	5 cut(s)	992, 1727, 1746, 1941, 2109
BspCNI	CTCAG	5 cut(s)	309, 538, 2099, 2263, 2266
BspHI	TCATGA	4 cut(s)	760, 1405, 1506, 2452
BspLI	GGNNCC	8 cut(s)	991, 1626, 1747, 1769, 1770, 1812, 1942, 2177
BspMAI	CTGCAG	1 cut(s)	109
BspMI	ACCTGC	2 cut(s)	112, 1851
BspPI	GGATC	2 cut(s)	19, 536
BspQI	GCTCTTC	1 cut(s)	723
BspT107I	GGYRCC	1 cut(s)	1810
BsrDI	GCAATG	1 cut(s)	671
BsrFI	RCCGGY	1 cut(s)	2312
BsrGI	TGTACA	1 cut(s)	1324
BsrI	ACTGG	6 cut(s)	1313, 1558, 1569, 1749, 1764, 2061
BssAI	RCCGGY	1 cut(s)	2312
BssECI	CCNNGG	5 cut(s)	237, 1249, 1451, 1771, 1772
BssMI	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
BssNAI	GTATAC	1 cut(s)	1791
BssNI	GRCGYC	1 cut(s)	2310
BssT1I	CCWWGG	2 cut(s)	237, 1249
Bst1107I	GTATAC	1 cut(s)	1791
Bst2UI	CCWGG	4 cut(s)	1452, 1729, 1773, 2365
Bst6I	CTCTTC	3 cut(s)	723, 1604, 2254
BstACI	GRCGYC	1 cut(s)	2310
BstAPI	GCANNNNNTGC	1 cut(s)	1292
BstAUI	TGTACA	1 cut(s)	1324
BstBAI	YACGTR	2 cut(s)	613, 2488
BstDEI	CTNAG	8 cut(s)	147, 296, 546, 1265, 2086, 2253, 2271, 2408
BstENI	CCTNNNNNAGG	1 cut(s)	1776
BstF5I	GGATG	4 cut(s)	556, 1625, 2203, 2284
BstH2I	RGCGCY	1 cut(s)	1525
BstHHI	GCGC	1 cut(s)	1524
BstKTI	GATC	6 cut(s)	27, 544, 1134, 1612, 2219, 2439
BstMAI	GTCTC	5 cut(s)	69, 129, 2251, 2301, 2465
BstMBI	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
BstMWI	GCNNNNNNNGC	3 cut(s)	682, 1292, 1301
BstNI	CCWGG	4 cut(s)	1452, 1729, 1773, 2365
BstNSI	RCATGY	4 cut(s)	689, 809, 1066, 1960
BstSCI	CCNGG	4 cut(s)	1450, 1727, 1771, 2363
BstSFI	CTRYAG	1 cut(s)	105
BstSLI	GKGCMC	2 cut(s)	1580, 1815
BstSNI	TACGTA	1 cut(s)	613
BstV1I	GCAGC	7 cut(s)	763, 1078, 1101, 1372, 1511, 1630, 1652
BstX2I	RGATCY	3 cut(s)	24, 541, 2216
BstXI	CCANNNNNNTGG	1 cut(s)	467
BstYI	RGATCY	3 cut(s)	24, 541, 2216
BstZ17I	GTATAC	1 cut(s)	1791
Bsu36I	CCTNAGG	1 cut(s)	546
BsuRI	GGCC	5 cut(s)	992, 1727, 1746, 1941, 2109
BtsCI	GGATG	4 cut(s)	556, 1625, 2203, 2284
BtsIMutI	CAGTG	6 cut(s)	1551, 1562, 2104, 2199, 2241, 2437
BveI	ACCTGC	2 cut(s)	112, 1851
CaiI	CAGNNNCTG	1 cut(s)	545
CciI	TCATGA	4 cut(s)	760, 1405, 1506, 2452
CfoI	GCGC	1 cut(s)	1524
Cfr10I	RCCGGY	1 cut(s)	2312
Cfr13I	GGNCC	7 cut(s)	720, 838, 990, 1745, 1768, 1940, 2176
CpoI	CGGWCCG	1 cut(s)	720
CseI	GACGC	2 cut(s)	51, 2318
Csp6I	GTAC	6 cut(s)	178, 610, 1325, 1400, 1595, 2095
CspI	CGGWCCG	1 cut(s)	720
CviQI	GTAC	6 cut(s)	178, 610, 1325, 1400, 1595, 2095
DdeI	CTNAG	8 cut(s)	147, 296, 546, 1265, 2086, 2253, 2271, 2408
DpnI	GATC	6 cut(s)	26, 543, 1133, 1611, 2218, 2438
DpnII	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
DraI	TTTAAA	1 cut(s)	1219
DraIII	CACNNNGTG	1 cut(s)	2434
EaeI	YGGCCR	1 cut(s)	2107
Eam1104I	CTCTTC	3 cut(s)	723, 1604, 2254
EarI	CTCTTC	3 cut(s)	723, 1604, 2254
Ecl136II	GAGCTC	2 cut(s)	295, 563
Eco105I	TACGTA	1 cut(s)	613
Eco130I	CCWWGG	2 cut(s)	237, 1249
Eco24I	GRGCYC	2 cut(s)	297, 565
Eco47I	GGWCC	4 cut(s)	720, 838, 1768, 2176
Eco53kI	GAGCTC	2 cut(s)	295, 563
Eco57I	CTGAAG	1 cut(s)	191
Eco81I	CCTNAGG	1 cut(s)	546
EcoICRI	GAGCTC	2 cut(s)	295, 563
EcoNI	CCTNNNNNAGG	1 cut(s)	1776
EcoO109I	RGGNCCY	2 cut(s)	1768, 2176
EcoRI	GAATTC	1 cut(s)	323
EcoRII	CCWGG	4 cut(s)	1450, 1727, 1771, 2363
EcoT14I	CCWWGG	2 cut(s)	237, 1249
EcoT22I	ATGCAT	3 cut(s)	18, 811, 2404
EcoT38I	GRGCYC	2 cut(s)	297, 565
ErhI	CCWWGG	2 cut(s)	237, 1249
Esp3I	CGTCTC	2 cut(s)	69, 2301
FaqI	GGGAC	9 cut(s)	21, 816, 1090, 1291, 1468, 1754, 1889, 2189, 2432
FauI	CCCGC	2 cut(s)	635, 1799
FbaI	TGATCA	1 cut(s)	1609
FblI	GTMKAC	1 cut(s)	1790
Fnu4HI	GCNGC	7 cut(s)	777, 1067, 1115, 1386, 1525, 1641, 1644
FokI	GGATG	4 cut(s)	563, 1632, 2210, 2291
FriOI	GRGCYC	2 cut(s)	297, 565
Fsp4HI	GCNGC	7 cut(s)	777, 1067, 1115, 1386, 1525, 1641, 1644
FspBI	CTAG	2 cut(s)	407, 2285
GlaI	GCGC	1 cut(s)	1523
GluI	GCNGC	7 cut(s)	777, 1067, 1115, 1386, 1525, 1641, 1644
GsaI	CCCAGC	3 cut(s)	8, 341, 887
HaeII	RGCGCY	1 cut(s)	1525
HaeIII	GGCC	5 cut(s)	992, 1727, 1746, 1941, 2109
HapII	CCGG	4 cut(s)	718, 1963, 2222, 2313
HgaI	GACGC	2 cut(s)	51, 2318
HhaI	GCGC	1 cut(s)	1524
Hin1I	GRCGYC	1 cut(s)	2310
Hin6I	GCGC	1 cut(s)	1522
HinP1I	GCGC	1 cut(s)	1522
HincII	GTYRAC	1 cut(s)	2190
HindII	GTYRAC	1 cut(s)	2190
HindIII	AAGCTT	1 cut(s)	246
HpaII	CCGG	4 cut(s)	718, 1963, 2222, 2313
HphI	GGTGA	3 cut(s)	226, 1185, 2236
Hpy166II	GTNNAC	3 cut(s)	1578, 1791, 2190
Hpy188I	TCNGA	7 cut(s)	69, 99, 1136, 2054, 2083, 2089, 2256
Hpy188III	TCNNGA	8 cut(s)	545, 761, 1129, 1159, 1406, 1507, 2453, 2464
Hpy8I	GTNNAC	3 cut(s)	1578, 1791, 2190
Hpy99I	CGWCG	1 cut(s)	2170
HpyAV	CCTTC	3 cut(s)	942, 1370, 2066
HpyCH4IV	ACGT	3 cut(s)	612, 1690, 2487
HpyF10VI	GCNNNNNNNGC	3 cut(s)	682, 1292, 1301
HpyF3I	CTNAG	8 cut(s)	147, 296, 546, 1265, 2086, 2253, 2271, 2408
HpySE526I	ACGT	3 cut(s)	612, 1690, 2487
Hsp92I	GRCGYC	1 cut(s)	2310
HspAI	GCGC	1 cut(s)	1522
KflI	GGGWCCC	1 cut(s)	1768
KroI	GCCGGC	1 cut(s)	2312
KroNI	GCCGGC	1 cut(s)	2314
Ksp22I	TGATCA	1 cut(s)	1609
Kzo9I	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
LguI	GCTCTTC	1 cut(s)	723
LmnI	GCTCC	3 cut(s)	560, 1108, 2425
Lsp1109I	GCAGC	7 cut(s)	763, 1078, 1101, 1372, 1511, 1630, 1652
LweI	GCATC	3 cut(s)	3, 818, 2188
MaeI	CTAG	2 cut(s)	407, 2285
MaeII	ACGT	3 cut(s)	612, 1690, 2487
MaeIII	GTNAC	5 cut(s)	232, 409, 1423, 1560, 1982
MalI	GATC	6 cut(s)	26, 543, 1133, 1611, 2218, 2438
MboI	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
MflI	RGATCY	3 cut(s)	24, 541, 2216
MhlI	GDGCHC	5 cut(s)	297, 565, 1580, 1815, 2430
MlsI	TGGCCA	1 cut(s)	2109
MluNI	TGGCCA	1 cut(s)	2109
MlyI	GAGTC	5 cut(s)	240, 1420, 1492, 2078, 2467
MmeI	TCCRAC	7 cut(s)	331, 364, 538, 777, 1220, 2077, 2452
Mox20I	TGGCCA	1 cut(s)	2109
Mph1103I	ATGCAT	3 cut(s)	18, 811, 2404
MreI	CGCCGGCG	1 cut(s)	2312
MroNI	GCCGGC	1 cut(s)	2312
MroXI	GAANNNNTTC	1 cut(s)	2158
MscI	TGGCCA	1 cut(s)	2109
MseI	TTAA	4 cut(s)	395, 899, 1218, 2141
MslI	CAYNNNNRTG	2 cut(s)	854, 1346
Msp20I	TGGCCA	1 cut(s)	2109
MspA1I	CMGCKG	4 cut(s)	337, 642, 1322, 1643
MspI	CCGG	4 cut(s)	718, 1963, 2222, 2313
MspR9I	CCNGG	4 cut(s)	1452, 1729, 1773, 2365
Mva1269I	GAATGC	2 cut(s)	455, 826
MvaI	CCWGG	4 cut(s)	1452, 1729, 1773, 2365
MwoI	GCNNNNNNNGC	3 cut(s)	682, 1292, 1301
NaeI	GCCGGC	1 cut(s)	2314
NdeII	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
NgoMIV	GCCGGC	1 cut(s)	2312
NlaIV	GGNNCC	8 cut(s)	991, 1626, 1747, 1769, 1770, 1812, 1942, 2177
NmuCI	GTSAC	4 cut(s)	232, 409, 1423, 1560
NsiI	ATGCAT	3 cut(s)	18, 811, 2404
NspI	RCATGY	4 cut(s)	689, 809, 1066, 1960
OliI	CACNNNNGTG	1 cut(s)	1346
PaeI	GCATGC	2 cut(s)	689, 1066
PagI	TCATGA	4 cut(s)	760, 1405, 1506, 2452
PasI	CCCWGGG	1 cut(s)	1772
PciI	ACATGT	1 cut(s)	1956
PciSI	GCTCTTC	1 cut(s)	723
PctI	GAATGC	2 cut(s)	455, 826
PdiI	GCCGGC	1 cut(s)	2314
PdmI	GAANNNNTTC	1 cut(s)	2158
PfeI	GAWTC	6 cut(s)	132, 190, 874, 1534, 1920, 2360
PflMI	CCANNNNNTGG	1 cut(s)	792
PkrI	GCNGC	7 cut(s)	778, 1068, 1116, 1387, 1526, 1642, 1645
PleI	GAGTC	5 cut(s)	239, 1420, 1492, 2078, 2466
PpsI	GAGTC	5 cut(s)	239, 1420, 1492, 2078, 2466
Ppu21I	YACGTR	2 cut(s)	613, 2488
PpuMI	RGGWCCY	2 cut(s)	1768, 2176
PscI	ACATGT	1 cut(s)	1956
PsiI	TTATAA	1 cut(s)	77
Psp124BI	GAGCTC	2 cut(s)	297, 565
Psp1406I	AACGTT	1 cut(s)	1690
Psp5II	RGGWCCY	2 cut(s)	1768, 2176
Psp6I	CCWGG	4 cut(s)	1450, 1727, 1771, 2363
PspFI	CCCAGC	3 cut(s)	4, 337, 883
PspGI	CCWGG	4 cut(s)	1450, 1727, 1771, 2363
PspN4I	GGNNCC	8 cut(s)	991, 1626, 1747, 1769, 1770, 1812, 1942, 2177
PspPI	GGNCC	7 cut(s)	720, 838, 990, 1745, 1768, 1940, 2176
PspPPI	RGGWCCY	2 cut(s)	1768, 2176
PstI	CTGCAG	1 cut(s)	109
PstNI	CAGNNNCTG	1 cut(s)	545
PsuI	RGATCY	3 cut(s)	24, 541, 2216
PvuII	CAGCTG	3 cut(s)	337, 1322, 1643
RsaI	GTAC	6 cut(s)	179, 611, 1326, 1401, 1596, 2096
RsaNI	GTAC	6 cut(s)	178, 610, 1325, 1400, 1595, 2095
RseI	CAYNNNNRTG	2 cut(s)	854, 1346
Rsr2I	CGGWCCG	1 cut(s)	720
RsrII	CGGWCCG	1 cut(s)	720
SacI	GAGCTC	2 cut(s)	297, 565
SapI	GCTCTTC	1 cut(s)	723
SaqAI	TTAA	4 cut(s)	395, 899, 1218, 2141
SatI	GCNGC	7 cut(s)	777, 1067, 1115, 1386, 1525, 1641, 1644
Sau3AI	GATC	6 cut(s)	24, 541, 1131, 1609, 2216, 2436
Sau96I	GGNCC	7 cut(s)	720, 838, 990, 1745, 1768, 1940, 2176
SchI	GAGTC	5 cut(s)	240, 1420, 1492, 2078, 2467
ScrFI	CCNGG	4 cut(s)	1452, 1729, 1773, 2365
SduI	GDGCHC	5 cut(s)	297, 565, 1580, 1815, 2430
SfaNI	GCATC	3 cut(s)	3, 818, 2188
SfcI	CTRYAG	1 cut(s)	105
SgrAI	CRCCGGYG	1 cut(s)	2312
SinI	GGWCC	4 cut(s)	720, 838, 1768, 2176
SmiMI	CAYNNNNRTG	2 cut(s)	854, 1346
SmlI	CTYRAG	2 cut(s)	29, 1428
SmoI	CTYRAG	2 cut(s)	29, 1428
SnaBI	TACGTA	1 cut(s)	613
SpeI	ACTAGT	1 cut(s)	406
SphI	GCATGC	2 cut(s)	689, 1066
SsiI	CCGC	5 cut(s)	92, 642, 1460, 1806, 1933
SspMI	CTAG	2 cut(s)	407, 2285
SstI	GAGCTC	2 cut(s)	297, 565
StyD4I	CCNGG	4 cut(s)	1450, 1727, 1771, 2363
StyI	CCWWGG	2 cut(s)	237, 1249
TaiI	ACGT	3 cut(s)	615, 1693, 2490
TaqII	GACCGA	1 cut(s)	737
TatI	WGTACW	5 cut(s)	177, 1324, 1399, 1594, 2094
TfiI	GAWTC	6 cut(s)	132, 190, 874, 1534, 1920, 2360
Tru1I	TTAA	4 cut(s)	395, 899, 1218, 2141
Tru9I	TTAA	4 cut(s)	395, 899, 1218, 2141
TscAI	CASTG	6 cut(s)	1558, 1569, 2104, 2199, 2248, 2437
TseFI	GTSAC	4 cut(s)	232, 409, 1423, 1560
TseI	GCWGC	7 cut(s)	776, 1066, 1114, 1385, 1524, 1640, 1643
Tsp45I	GTSAC	4 cut(s)	232, 409, 1423, 1560
TspDTI	ATGAA	9 cut(s)	316, 558, 660, 741, 749, 777, 1431, 1822, 2032
TspGWI	ACGGA	1 cut(s)	2154
TspRI	CASTG	6 cut(s)	1558, 1569, 2104, 2199, 2248, 2437
Van91I	CCANNNNNTGG	1 cut(s)	792
VneI	GTGCAC	1 cut(s)	1576
VpaK11BI	GGWCC	4 cut(s)	720, 838, 1768, 2176
XagI	CCTNNNNNAGG	1 cut(s)	1776
XapI	RAATTY	6 cut(s)	323, 367, 425, 1948, 2288, 2478
XceI	RCATGY	4 cut(s)	689, 809, 1066, 1960
XcmI	CCANNNNNNNNNTGG	3 cut(s)	793, 1756, 2191
XmiI	GTMKAC	1 cut(s)	1790
XmnI	GAANNNNTTC	1 cut(s)	2158
XspI	CTAG	2 cut(s)	407, 2285
Zsp2I	ATGCAT	3 cut(s)	18, 811, 2404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.