Rroxscaffold_1G00057810

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
79804185 .. 79810056
5872 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00057810.1

Sequence Viewer

Length: 2115 bp
ATGGCTGCACAGGAAGACCCTGACAAAAAAGGTGGTGTCTGGGTTTTGGACCAGCAACTTGATCGGCCCATTGATGTGGAGGCCAAGAAGGTCAAAGAAACGAACATTCACAAGAACTGTTCATCAATGATGCTTCTGCAACTTGCATTTCAAAGCCTTGGTGTGGTCTATGGAGACTTGGGCACATCTCCTTTATATGTATTCTATAATATATTTCCTGATGGGGTTGATGACAAAGAGGATGTTATTGGAGCTTTATCTGTGATTATATGGTCTCTTACTTTCGTTCCACTTCTGAAGTATGTCTTTATTGTCTGTAGAGCAAATGACAATGGTCAAGGCGGAACATTTGCTCTTTATTCATTACTTTGTCGACATGCAAAAATAAAGAGTGTTCCTAACCAAGACGTAACTGATGAGGAGGTAACAACATTTAGTCGTTCCACATTTGGTGAGAAATCATTTGCAGCAAGAATCAAGAGAGGGTTGGAGAAACATGAATTCTTGCAGAACATGCTTCTTATCCTTGTGCTGATTGGCTCTTGCATGGTGATTGGGGATGGGATTTTGACTCCTGCCATATCAGTTCTTTCAGCTGTTGGTGGGATGAATGTGCATCACAAGGGGATTAGTAAGGGCACAGAAACACTTTTCGCTGACCTAAACCATTTCCCAGTCCTGTCCATACAGATTGCTTTTACAGTAGTTGTATTTCCTTGCCTTCTTTTAGCATACTGTGGTCAAGCTGCGTACCTCATGAAAAATTCCAACAATATGGACCGTGCTTTTTATCAGTCTGTTCCAGACAATATATATTGGCCTGTGTATGTCATTGCAATTGCAGCTGCTATAGTTGCAAGTCAATCCACCATAACAGCAACTTTTTCACTAATTAAGCAGGCCCTTTCACTTGGCTGCTTCCCAAGAGTCAAAGTTATATATACTTCAAGGCACCGCCACCAGATATATATTCCAGATGTTAATTGGATTCTTATGATCCTCTGTATTTCTGTGACAGCTGGATTTAACCAAAAAACCCAGATTGGAAATGCTGCTGGGACGGCAGTTGTTATAGTCATGTTGGTCACCACTTTTCTTATGACTTTGGTGATGATATTAGTGTGGCGCGTACATTGGATTCTTGTCCTCCTCTTCACCAGCTTATCATTACTGGTGGAGGGTCCTTACCTATCTGCTGTACTCCTTAAGGTTGATGAAGGTGGTTGGGCGCCCCTTGTGATTGCAACAGCTTTCTTTATCGTGATGTATGCTTGGAATTACGGTACTGTAAGACGATATGACATTGAAATGCATAGTAAGGTGTCAATGGCTTGGATTATTGGACTTGGTCCGAGTTTAGGACTGGTTCGCCTACCTGGCATAGTACTAGTGTATTCTGAGCTTGCTAGTGGAGTACCCCGCATCTTCTCTCACTTTATAACCAACCTGCCTGCCATCCATTCAGTTGTCATATTTGTCTGCGTGAAGTACCTCCCTGTCTGCACAGTCCCTGAGGAAGAGCGGTTCTTTGTAAAGCGGATCGGACCTAATAATTTCCACATGTTCCGTTGTTTTGTGAGATATGGCTACAAAGATGACCACAGGAAAGATGATGATTTTGAGGAAAAGCTCTTTGACAGCCTTTTCATGTTTCTCCGGCTTGAGTCCCTAATGGAAGCGTCTTCTGATACTGATGATGTGTCTACCATACTTGACCAGCAAGCTTTCGAATCCAGAGAATTCCCGTTTGACAACAACGTTAGTATACCTTTCTCCAATGCAGACCTCACAATTTCATCCGTGGAGACAATGACAATAACGCCGGAGGATGTGTCCTTGAATGCAAGTCGTGCATTGACGATGTCACACCGGACAAGCACCAATGCCGAGATTGAGATGAATGAGGTAGAATACTTGCACAACTGTAAAGATGCAGGGGTAGTTCACATGATGGGAAACACCATAGTAAGAGCTAGGAGGGATTCTAATTTTGTGAAGCGGATAGTTATAGATTATCTATATTCATTTCTTAGGAAGATATGCAGGGGAAACAGTGTATTGTTCTTCGTCCCTCAAGAGAGCCTCTTGAATGTTGGACAGATACTCTATGTATAA

Protein Analysis

704

Amino Acids

78.92

Weight (kDa)

6.2

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 48 - 211 3.1e-43 K+ potassium transporter integral membrane domain
K_trans PF02705 213 - 446 8.2e-75 K+ potassium transporter integral membrane domain
K_trans_C PF22776 459 - 701 1.6e-23 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1439
Acc36I ACCTGC 1 cut(s) 1455
AccB1I GGYRCC 2 cut(s) 951, 1228
AccBSI CCGCTC 1 cut(s) 1522
AccI GTMKAC 3 cut(s) 373, 1703, 1765
AccII CGCG 1 cut(s) 1128
AciI CCGC 6 cut(s) 342, 955, 1420, 1522, 1537, 1999
AclI AACGTT 1 cut(s) 1758
AclWI GGATC 2 cut(s) 991, 1547
AcsI RAATTY 3 cut(s) 500, 763, 1739
AcuI CTGAAG 1 cut(s) 317
AcyI GRCGYC 1 cut(s) 1229
AfaI GTAC 7 cut(s) 752, 1131, 1200, 1285, 1386, 1416, 1490
AfiI CCNNNNNNNGG 2 cut(s) 163, 1358
AflII CTTAAG 1 cut(s) 1205
AflIII ACRYGT 1 cut(s) 1560
AgsI TTSAA 5 cut(s) 152, 948, 1307, 1840, 2089
AhlI ACTAGT 1 cut(s) 1387
AjnI CCWGG 1 cut(s) 1375
AloI GAACNNNNNNTCC 2 cut(s) 1508, 1540
Alw26I GTCTC 3 cut(s) 168, 279, 1799
AlwI GGATC 2 cut(s) 991, 1547
AlwNI CAGNNNCTG 1 cut(s) 1511
AoxI GGCC 4 cut(s) 65, 81, 818, 900
ApeKI GCWGC 7 cut(s) 5, 467, 746, 842, 845, 915, 1052
ApoI RAATTY 3 cut(s) 500, 763, 1739
AspLEI GCGC 2 cut(s) 1128, 1231
AspS9I GGNCC 7 cut(s) 49, 66, 778, 901, 1181, 1349, 1544
AsuHPI GGTGA 5 cut(s) 464, 562, 1078, 1120, 1147
AsuII TTCGAA 1 cut(s) 1728
AvaII GGWCC 5 cut(s) 49, 778, 1181, 1349, 1544
AxyI CCTNAGG 1 cut(s) 1512
BaeGI GKGCMC 2 cut(s) 185, 641
BanI GGYRCC 2 cut(s) 951, 1228
BbsI GAAGAC 2 cut(s) 21, 1674
BbvI GCAGC 6 cut(s) 479, 733, 832, 854, 902, 1039
BccI CCATC 4 cut(s) 215, 554, 1463, 1945
BceAI ACGGC 1 cut(s) 1077
BcgI CGANNNNNNTGC 2 cut(s) 44, 78
BciT130I CCWGG 1 cut(s) 1377
BcoDI GTCTC 3 cut(s) 168, 279, 1799
BcuI ACTAGT 1 cut(s) 1387
BfaI CTAG 3 cut(s) 1388, 1407, 1974
BfmI CTRYAG 2 cut(s) 316, 849
BfoI RGCGCY 1 cut(s) 1232
BfrI CTTAAG 1 cut(s) 1205
BfuAI ACCTGC 1 cut(s) 1455
BglI GCCNNNNNGGC 1 cut(s) 1377
BisI GCNGC 7 cut(s) 6, 468, 747, 843, 846, 916, 1053
BlsI GCNGC 7 cut(s) 7, 469, 748, 844, 847, 917, 1054
BmcAI AGTACT 1 cut(s) 1386
Bme1390I CCNGG 1 cut(s) 1377
Bme18I GGWCC 5 cut(s) 49, 778, 1181, 1349, 1544
BmgT120I GGNCC 7 cut(s) 49, 66, 778, 901, 1181, 1349, 1544
BmiI GGNNCC 3 cut(s) 953, 1182, 1230
BmrFI CCNGG 1 cut(s) 1377
BmrI ACTGGG 1 cut(s) 668
BmsI GCATC 4 cut(s) 120, 625, 1431, 1921
BmuI ACTGGG 1 cut(s) 668
BoxI GACNNNNGTC 1 cut(s) 333
BpiI GAAGAC 2 cut(s) 21, 1674
Bpu14I TTCGAA 1 cut(s) 1728
BpuEI CTTGAG 2 cut(s) 1682, 2058
BsaHI GRCGYC 1 cut(s) 1229
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 2 cut(s) 157, 1800
BsaWI WCCGGW 1 cut(s) 1869
BsaXI ACNNNNNCTCC 2 cut(s) 1817, 1847
Bsc4I CCNNNNNNNGG 2 cut(s) 163, 1358
Bse1I ACTGG 3 cut(s) 674, 1176, 1368
Bse21I CCTNAGG 1 cut(s) 1512
Bse3DI GCAATG 1 cut(s) 831
BseBI CCWGG 1 cut(s) 1377
BseDI CCNNGG 2 cut(s) 157, 1800
BseGI GGATG 6 cut(s) 247, 565, 612, 1455, 1796, 1834
BseLI CCNNNNNNNGG 2 cut(s) 163, 1358
BseMI GCAATG 1 cut(s) 831
BseMII CTCAG 2 cut(s) 1389, 1503
BseNI ACTGG 3 cut(s) 674, 1176, 1368
BseRI GAGGAG 2 cut(s) 434, 1139
BseSI GKGCMC 2 cut(s) 185, 641
BseXI GCAGC 6 cut(s) 479, 733, 832, 854, 902, 1039
BseYI CCCAGC 1 cut(s) 1055
BsgI GTGCAG 1 cut(s) 1486
Bsh1236I CGCG 1 cut(s) 1128
BshFI GGCC 4 cut(s) 67, 83, 820, 902
BshNI GGYRCC 2 cut(s) 951, 1228
BsiSI CCGG 3 cut(s) 1657, 1823, 1870
BslFI GGGAC 4 cut(s) 1072, 1493, 1651, 2054
BslI CCNNNNNNNGG 2 cut(s) 163, 1358
BsmAI GTCTC 3 cut(s) 168, 279, 1799
BsmFI GGGAC 4 cut(s) 1072, 1493, 1651, 2054
BsmI GAATGC 1 cut(s) 1846
BsnI GGCC 4 cut(s) 67, 83, 820, 902
Bso31I GGTCTC 1 cut(s) 279
Bsp119I TTCGAA 1 cut(s) 1728
Bsp1286I GDGCHC 2 cut(s) 185, 641
Bsp143I GATC 3 cut(s) 61, 996, 1539
BspACI CCGC 6 cut(s) 342, 955, 1420, 1522, 1537, 1999
BspANI GGCC 4 cut(s) 67, 83, 820, 902
BspCNI CTCAG 2 cut(s) 1390, 1504
BspFNI CGCG 1 cut(s) 1128
BspHI TCATGA 1 cut(s) 756
BspLI GGNNCC 3 cut(s) 953, 1182, 1230
BspMI ACCTGC 1 cut(s) 1455
BspPI GGATC 2 cut(s) 991, 1547
BspQI GCTCTTC 1 cut(s) 1512
BspT104I TTCGAA 1 cut(s) 1728
BspT107I GGYRCC 2 cut(s) 951, 1228
BspTI CTTAAG 1 cut(s) 1205
BspTNI GGTCTC 1 cut(s) 279
BsrBI CCGCTC 1 cut(s) 1522
BsrDI GCAATG 1 cut(s) 831
BsrI ACTGG 3 cut(s) 674, 1176, 1368
BssECI CCNNGG 2 cut(s) 157, 1800
BssMI GATC 3 cut(s) 61, 996, 1539
BssNAI GTATAC 1 cut(s) 1766
BssNI GRCGYC 1 cut(s) 1229
BssT1I CCWWGG 1 cut(s) 157
Bst1107I GTATAC 1 cut(s) 1766
Bst2UI CCWGG 1 cut(s) 1377
Bst4CI ACNGT 9 cut(s) 119, 703, 737, 782, 1283, 1288, 1507, 1925, 2054
Bst6I CTCTTC 2 cut(s) 1157, 1512
BstACI GRCGYC 1 cut(s) 1229
BstAFI CTTAAG 1 cut(s) 1205
BstAPI GCANNNNNTGC 2 cut(s) 514, 1850
BstBI TTCGAA 1 cut(s) 1728
BstC8I GCNNGC 4 cut(s) 900, 1404, 1452, 1722
BstDEI CTNAG 3 cut(s) 1398, 1512, 2030
BstDSI CCRYGG 1 cut(s) 1800
BstEII GGTNACC 1 cut(s) 1084
BstF5I GGATG 6 cut(s) 247, 565, 612, 1455, 1796, 1834
BstFNI CGCG 1 cut(s) 1128
BstH2I RGCGCY 1 cut(s) 1232
BstHHI GCGC 2 cut(s) 1128, 1231
BstKTI GATC 3 cut(s) 64, 999, 1542
BstMAI GTCTC 3 cut(s) 168, 279, 1799
BstMBI GATC 3 cut(s) 61, 996, 1539
BstMWI GCNNNNNNNGC 6 cut(s) 514, 842, 854, 1061, 1377, 1850
BstNI CCWGG 1 cut(s) 1377
BstNSI RCATGY 3 cut(s) 380, 517, 1564
BstPAI GACNNNNGTC 1 cut(s) 333
BstPI GGTNACC 1 cut(s) 1084
BstSCI CCNGG 1 cut(s) 1375
BstSFI CTRYAG 2 cut(s) 316, 849
BstSLI GKGCMC 2 cut(s) 185, 641
BstUI CGCG 1 cut(s) 1128
BstV1I GCAGC 6 cut(s) 479, 733, 832, 854, 902, 1039
BstV2I GAAGAC 2 cut(s) 21, 1674
BstXI CCANNNNNNTGG 2 cut(s) 76, 775
BstZ17I GTATAC 1 cut(s) 1766
Bsu36I CCTNAGG 1 cut(s) 1512
BsuRI GGCC 4 cut(s) 67, 83, 820, 902
BtgI CCRYGG 1 cut(s) 1800
BtsCI GGATG 6 cut(s) 247, 565, 612, 1455, 1796, 1834
BtsIMutI CAGTG 1 cut(s) 2059
BveI ACCTGC 1 cut(s) 1455
Cac8I GCNNGC 4 cut(s) 900, 1404, 1452, 1722
CaiI CAGNNNCTG 1 cut(s) 1511
CciI TCATGA 1 cut(s) 756
CfoI GCGC 2 cut(s) 1128, 1231
Cfr13I GGNCC 7 cut(s) 49, 66, 778, 901, 1181, 1349, 1544
CseI GACGC 1 cut(s) 1668
Csp6I GTAC 7 cut(s) 751, 1130, 1199, 1284, 1385, 1415, 1489
CspCI CAANNNNNGTGG 2 cut(s) 13, 48
CviAII CATG 9 cut(s) 377, 497, 514, 547, 757, 1078, 1561, 1648, 1948
CviQI GTAC 7 cut(s) 751, 1130, 1199, 1284, 1385, 1415, 1489
DdeI CTNAG 3 cut(s) 1398, 1512, 2030
DinI GGCGCC 1 cut(s) 1230
DpnI GATC 3 cut(s) 63, 998, 1541
DpnII GATC 3 cut(s) 61, 996, 1539
Eam1104I CTCTTC 2 cut(s) 1157, 1512
EarI CTCTTC 2 cut(s) 1157, 1512
EciI GGCGGA 1 cut(s) 357
Eco130I CCWWGG 1 cut(s) 157
Eco31I GGTCTC 1 cut(s) 279
Eco47I GGWCC 5 cut(s) 49, 778, 1181, 1349, 1544
Eco57I CTGAAG 1 cut(s) 317
Eco81I CCTNAGG 1 cut(s) 1512
Eco91I GGTNACC 1 cut(s) 1084
EcoO109I RGGNCCY 2 cut(s) 901, 1181
EcoO65I GGTNACC 1 cut(s) 1084
EcoRI GAATTC 2 cut(s) 500, 1739
EcoRII CCWGG 1 cut(s) 1375
EcoT14I CCWWGG 1 cut(s) 157
EcoT22I ATGCAT 1 cut(s) 1314
EgeI GGCGCC 1 cut(s) 1230
EheI GGCGCC 1 cut(s) 1230
ErhI CCWWGG 1 cut(s) 157
FaeI CATG 9 cut(s) 380, 500, 517, 550, 760, 1081, 1564, 1651, 1951
FalI AAGNNNNNCTT 2 cut(s) 290, 322
FaqI GGGAC 4 cut(s) 1072, 1493, 1651, 2054
FatI CATG 9 cut(s) 376, 496, 513, 546, 756, 1077, 1560, 1647, 1947
FauI CCCGC 1 cut(s) 1427
FblI GTMKAC 3 cut(s) 373, 1703, 1765
Fnu4HI GCNGC 7 cut(s) 6, 468, 747, 843, 846, 916, 1053
FokI GGATG 6 cut(s) 254, 572, 619, 1442, 1783, 1841
Fsp4HI GCNGC 7 cut(s) 6, 468, 747, 843, 846, 916, 1053
FspBI CTAG 3 cut(s) 1388, 1407, 1974
GlaI GCGC 2 cut(s) 1127, 1230
GluI GCNGC 7 cut(s) 6, 468, 747, 843, 846, 916, 1053
GsaI CCCAGC 1 cut(s) 1059
HaeII RGCGCY 1 cut(s) 1232
HaeIII GGCC 4 cut(s) 67, 83, 820, 902
HapII CCGG 3 cut(s) 1657, 1823, 1870
HgaI GACGC 1 cut(s) 1668
HhaI GCGC 2 cut(s) 1128, 1231
Hin1I GRCGYC 1 cut(s) 1229
Hin1II CATG 9 cut(s) 380, 500, 517, 550, 760, 1081, 1564, 1651, 1951
Hin6I GCGC 2 cut(s) 1126, 1229
HinP1I GCGC 2 cut(s) 1126, 1229
HincII GTYRAC 1 cut(s) 374
HindII GTYRAC 1 cut(s) 374
HindIII AAGCTT 1 cut(s) 1722
HinfI GANTC 8 cut(s) 474, 571, 927, 988, 1138, 1664, 1730, 1982
HpaII CCGG 3 cut(s) 1657, 1823, 1870
HphI GGTGA 5 cut(s) 464, 562, 1078, 1120, 1147
Hpy166II GTNNAC 4 cut(s) 374, 1704, 1766, 1945
Hpy188I TCNGA 5 cut(s) 297, 1353, 1399, 1544, 1687
Hpy188III TCNNGA 9 cut(s) 218, 478, 757, 803, 974, 1261, 1734, 2075, 2086
Hpy8I GTNNAC 4 cut(s) 374, 1704, 1766, 1945
HpyAV CCTTC 3 cut(s) 82, 731, 1211
HpyCH4III ACNGT 9 cut(s) 119, 703, 737, 782, 1283, 1288, 1507, 1925, 2054
HpyCH4IV ACGT 2 cut(s) 408, 1758
HpyF10VI GCNNNNNNNGC 6 cut(s) 514, 842, 854, 1061, 1377, 1850
HpyF3I CTNAG 3 cut(s) 1398, 1512, 2030
HpySE526I ACGT 2 cut(s) 408, 1758
Hsp92I GRCGYC 1 cut(s) 1229
Hsp92II CATG 9 cut(s) 380, 500, 517, 550, 760, 1081, 1564, 1651, 1951
HspAI GCGC 2 cut(s) 1126, 1229
KasI GGCGCC 1 cut(s) 1228
Kzo9I GATC 3 cut(s) 61, 996, 1539
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 1 cut(s) 251
Lsp1109I GCAGC 6 cut(s) 479, 733, 832, 854, 902, 1039
LweI GCATC 4 cut(s) 120, 625, 1431, 1921
MaeI CTAG 3 cut(s) 1388, 1407, 1974
MaeII ACGT 2 cut(s) 408, 1758
MaeIII GTNAC 5 cut(s) 409, 424, 1012, 1084, 1863
MalI GATC 3 cut(s) 63, 998, 1541
MbiI CCGCTC 1 cut(s) 1522
MboI GATC 3 cut(s) 61, 996, 1539
MboII GAAGA 7 cut(s) 26, 1144, 1417, 1529, 1674, 2047, 2056
MfeI CAATTG 1 cut(s) 837
MhlI GDGCHC 2 cut(s) 185, 641
Mly113I GGCGCC 1 cut(s) 1229
MlyI GAGTC 3 cut(s) 565, 936, 1673
MmeI TCCRAC 3 cut(s) 468, 792, 2074
Mph1103I ATGCAT 1 cut(s) 1314
MseI TTAA 4 cut(s) 894, 981, 1026, 1206
MslI CAYNNNNRTG 2 cut(s) 74, 1307
MspA1I CMGCKG 3 cut(s) 596, 845, 1019
MspCI CTTAAG 1 cut(s) 1205
MspI CCGG 3 cut(s) 1657, 1823, 1870
MspR9I CCNGG 1 cut(s) 1377
MunI CAATTG 1 cut(s) 837
Mva1269I GAATGC 1 cut(s) 1846
MvaI CCWGG 1 cut(s) 1377
MvnI CGCG 1 cut(s) 1128
MwoI GCNNNNNNNGC 6 cut(s) 514, 842, 854, 1061, 1377, 1850
NarI GGCGCC 1 cut(s) 1229
NdeII GATC 3 cut(s) 61, 996, 1539
NlaIII CATG 9 cut(s) 380, 500, 517, 550, 760, 1081, 1564, 1651, 1951
NlaIV GGNNCC 3 cut(s) 953, 1182, 1230
NmeAIII GCCGAG 1 cut(s) 1912
NmuCI GTSAC 3 cut(s) 1012, 1084, 1863
NsiI ATGCAT 1 cut(s) 1314
NspI RCATGY 3 cut(s) 380, 517, 1564
NspV TTCGAA 1 cut(s) 1728
PagI TCATGA 1 cut(s) 756
PciI ACATGT 1 cut(s) 1560
PciSI GCTCTTC 1 cut(s) 1512
PctI GAATGC 1 cut(s) 1846
PfeI GAWTC 5 cut(s) 474, 988, 1138, 1730, 1982
PflFI GACNNNGTC 2 cut(s) 1347, 1861
PkrI GCNGC 7 cut(s) 7, 469, 748, 844, 847, 917, 1054
PleI GAGTC 3 cut(s) 565, 935, 1672
PluTI GGCGCC 1 cut(s) 1232
PpsI GAGTC 3 cut(s) 565, 935, 1672
PpuMI RGGWCCY 1 cut(s) 1181
PscI ACATGT 1 cut(s) 1560
PshAI GACNNNNGTC 1 cut(s) 333
PsiI TTATAA 1 cut(s) 1439
Psp1406I AACGTT 1 cut(s) 1758
Psp5II RGGWCCY 1 cut(s) 1181
Psp6I CCWGG 1 cut(s) 1375
PspEI GGTNACC 1 cut(s) 1084
PspFI CCCAGC 1 cut(s) 1055
PspGI CCWGG 1 cut(s) 1375
PspN4I GGNNCC 3 cut(s) 953, 1182, 1230
PspPI GGNCC 7 cut(s) 49, 66, 778, 901, 1181, 1349, 1544
PspPPI RGGWCCY 1 cut(s) 1181
PstNI CAGNNNCTG 1 cut(s) 1511
PsyI GACNNNGTC 2 cut(s) 1347, 1861
PvuII CAGCTG 3 cut(s) 596, 845, 1019
RsaI GTAC 7 cut(s) 752, 1131, 1200, 1285, 1386, 1416, 1490
RsaNI GTAC 7 cut(s) 751, 1130, 1199, 1284, 1385, 1415, 1489
RseI CAYNNNNRTG 2 cut(s) 74, 1307
SalI GTCGAC 1 cut(s) 372
SapI GCTCTTC 1 cut(s) 1512
SaqAI TTAA 4 cut(s) 894, 981, 1026, 1206
SatI GCNGC 7 cut(s) 6, 468, 747, 843, 846, 916, 1053
Sau3AI GATC 3 cut(s) 61, 996, 1539
Sau96I GGNCC 7 cut(s) 49, 66, 778, 901, 1181, 1349, 1544
ScaI AGTACT 1 cut(s) 1386
SchI GAGTC 3 cut(s) 565, 936, 1673
ScrFI CCNGG 1 cut(s) 1377
SduI GDGCHC 2 cut(s) 185, 641
SfaNI GCATC 4 cut(s) 120, 625, 1431, 1921
SfcI CTRYAG 2 cut(s) 316, 849
SfoI GGCGCC 1 cut(s) 1230
SfuI TTCGAA 1 cut(s) 1728
SinI GGWCC 5 cut(s) 49, 778, 1181, 1349, 1544
SmiMI CAYNNNNRTG 2 cut(s) 74, 1307
SmlI CTYRAG 3 cut(s) 1205, 1661, 2073
SmoI CTYRAG 3 cut(s) 1205, 1661, 2073
SpeI ACTAGT 1 cut(s) 1387
SsiI CCGC 6 cut(s) 342, 955, 1420, 1522, 1537, 1999
SspDI GGCGCC 1 cut(s) 1228
SspMI CTAG 3 cut(s) 1388, 1407, 1974
StyD4I CCNGG 1 cut(s) 1375
StyI CCWWGG 1 cut(s) 157
TaaI ACNGT 9 cut(s) 119, 703, 737, 782, 1283, 1288, 1507, 1925, 2054
TaiI ACGT 2 cut(s) 411, 1761
TaqI TCGA 2 cut(s) 373, 1728
TatI WGTACW 2 cut(s) 1198, 1384
TfiI GAWTC 5 cut(s) 474, 988, 1138, 1730, 1982
Tru1I TTAA 4 cut(s) 894, 981, 1026, 1206
Tru9I TTAA 4 cut(s) 894, 981, 1026, 1206
TscAI CASTG 1 cut(s) 2059
TseFI GTSAC 3 cut(s) 1012, 1084, 1863
TseI GCWGC 7 cut(s) 5, 467, 746, 842, 845, 915, 1052
Tsp45I GTSAC 3 cut(s) 1012, 1084, 1863
TspGWI ACGGA 2 cut(s) 1556, 1789
TspRI CASTG 1 cut(s) 2059
Tth111I GACNNNGTC 2 cut(s) 1347, 1861
Vha464I CTTAAG 1 cut(s) 1205
VpaK11BI GGWCC 5 cut(s) 49, 778, 1181, 1349, 1544
XapI RAATTY 3 cut(s) 500, 763, 1739
XceI RCATGY 3 cut(s) 380, 517, 1564
XcmI CCANNNNNNNNNTGG 1 cut(s) 981
XmiI GTMKAC 3 cut(s) 373, 1703, 1765
XspI CTAG 3 cut(s) 1388, 1407, 1974
ZrmI AGTACT 1 cut(s) 1386
Zsp2I ATGCAT 1 cut(s) 1314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.