Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000033.1

Orthogroup ID

OG0000477

Physical Location & Seq

Genomic Coordinates Reverse (-)

854 .. 6385

Gene Structure 5532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000033.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

atggctgcacaggaagaccctgacaaaaaaagtggtgtctgggttttggaccagcaacttgatcagcccattgatgtggaggccaagaagatcaaagaaacgaacattcacaagaactgttcatcaatgatggttctgcaacttgcatttcaaagcctcggtgtggtctatggagacttgggcacatctcctttatatgtattctataatatatttcctgatggggttgatgacaaagaggatgttgttggagctttatctgtgattatatggtctcttactttcgttccacttctgaagtatgtctttattgtctgtagagcaaatgacaatggtcaaggcggaacatttgctctttattcattactttgtcgacatgcaaaaataaagagtgttcctaaccaagacgtaactgatgaggaggtaacaacatttagtcgttctacatttggtgagaaatcatttgcagcaagaatcaagagagggttggagaaacatgaattcttgcagaacatgcttcttatccttgtgctgatcggctcttgcatggtgattggggatgggattttgactccggccatatcagttctttcagctgttggtgggatgaatgtgcatcacaaggggattagtaaggacactatatattggcctgtgtatgtcattgcaattgcagctgctatagttgcaagtcagtccaccataacagcaactttttcactaattaagcaggccctttcacttggctgcttcccaagagtcaaagttatatatacttcaaggcaccgccaccagatatatattccagatgttaattggattcttatgatcctctgcatttctgtgacagctggatttaaccaaaaaacccagattggaaatgctgctgggacggcagttgttatagtcatgttggtcaccacttttcttatgactttggtgatgatattagtgtggcgcgtacattggattcttgtcctcctcttcaccagcttatcattacttgtggagggcccttacctatctgctgtactccttaaggttgatgaaggtggttgggcgcctcttgtgattgcaacagctttctttatcgtgatgtatgtttggaattacggtactgtaagacgatatgacattgaaatgcatagtaaggtgtcaatggcttggattattggacttggtccgagtttaggactggttcgtgtacctggcatagtactagtgtattctgagcttgctagtggagtaccccgcatcttctcgcactttataaccaacctgcctgccatccattcagtcgtcatatttgtctgcgtgaagtacctccctgtctgcacagtccctgaggaagagcggttctttgtaaagcggatcggacctaataatttccacatgttccgttgttttgtgagatatggctacaaagatgaccacgggaaagatgatgattttgaggaaaagctctttgacagtcttttcatgtttatccggcttgagtccctaatggaagcgtcttctgatactgatgatgtgtctactatacttgaccagcaagctttcgaatcaagagaaatcccgtttgacaacgacgttagtatacctttctccaatgcagacctcacaatttcatccgtggagacaatgacaataacgccggaggatgtgtcattgaatgcaagtcgtgcattgaccatgtcacaccggacaagcgccaatgccgagattgagatgaatgaggtagaatacttgcacaactgtaaagatgcaggggtagttcacatgatgggaaacaccatagtaagagctaggagggattctaattttgtgaagcggatagttatagattatctgtattcatttcttaggaagatatgcaggggaaacagtgtattgttcttcgttcctcaagagagcctcttgaatgttggacagatactctatgtataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

648

Amino Acids

72.52

Weight (kDa)

5.99

Isoelectric Point (pI)

35.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca	FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica	MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica	Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis	pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis	RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata	RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora	Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa	Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha	Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana	Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1271
Acc36I	ACCTGC	1 cut(s)	1287
AccB1I	GGYRCC	2 cut(s)	783, 1060
AccBSI	CCGCTC	1 cut(s)	1354
AccI	GTMKAC	3 cut(s)	373, 1535, 1597
AccII	CGCG	1 cut(s)	960
AciI	CCGC	6 cut(s)	342, 787, 1252, 1354, 1369, 1831
AclWI	GGATC	2 cut(s)	823, 1379
AcoI	YGGCCR	1 cut(s)	576
AcsI	RAATTY	1 cut(s)	500
AcuI	CTGAAG	1 cut(s)	317
AcyI	GRCGYC	1 cut(s)	1061
AfaI	GTAC	7 cut(s)	963, 1032, 1117, 1206, 1218, 1248, 1322
AfiI	CCNNNNNNNGG	2 cut(s)	163, 1190
AflII	CTTAAG	1 cut(s)	1037
AflIII	ACRYGT	1 cut(s)	1392
AgsI	TTSAA	5 cut(s)	152, 780, 1139, 1672, 1921
AhlI	ACTAGT	1 cut(s)	1219
AjnI	CCWGG	1 cut(s)	1207
AloI	GAACNNNNNNTCC	2 cut(s)	1340, 1372
Alw26I	GTCTC	3 cut(s)	168, 279, 1631
AlwI	GGATC	2 cut(s)	823, 1379
AlwNI	CAGNNNCTG	1 cut(s)	1343
AoxI	GGCC	5 cut(s)	81, 576, 650, 732, 1012
ApaI	GGGCCC	1 cut(s)	1016
ApeKI	GCWGC	6 cut(s)	5, 467, 674, 677, 747, 884
ApoI	RAATTY	1 cut(s)	500
AspLEI	GCGC	3 cut(s)	960, 1063, 1712
AspS9I	GGNCC	6 cut(s)	49, 733, 1012, 1013, 1181, 1376
AsuHPI	GGTGA	5 cut(s)	464, 562, 910, 952, 979
AsuII	TTCGAA	1 cut(s)	1560
AvaII	GGWCC	3 cut(s)	49, 1181, 1376
AxyI	CCTNAGG	1 cut(s)	1344
BaeGI	GKGCMC	2 cut(s)	185, 1016
BanI	GGYRCC	2 cut(s)	783, 1060
BanII	GRGCYC	1 cut(s)	1016
BbsI	GAAGAC	2 cut(s)	21, 1506
BbvI	GCAGC	5 cut(s)	479, 664, 686, 734, 871
BccI	CCATC	5 cut(s)	124, 215, 554, 1295, 1777
BceAI	ACGGC	1 cut(s)	909
BciT130I	CCWGG	1 cut(s)	1209
BclI	TGATCA	1 cut(s)	61
BcoDI	GTCTC	3 cut(s)	168, 279, 1631
BcuI	ACTAGT	1 cut(s)	1219
BfaI	CTAG	3 cut(s)	1220, 1239, 1806
BfmI	CTRYAG	2 cut(s)	316, 681
BfoI	RGCGCY	2 cut(s)	1064, 1713
BfrI	CTTAAG	1 cut(s)	1037
BfuAI	ACCTGC	1 cut(s)	1287
BisI	GCNGC	6 cut(s)	6, 468, 675, 678, 748, 885
BlsI	GCNGC	6 cut(s)	7, 469, 676, 679, 749, 886
BmcAI	AGTACT	1 cut(s)	1218
Bme1390I	CCNGG	1 cut(s)	1209
Bme18I	GGWCC	3 cut(s)	49, 1181, 1376
BmgT120I	GGNCC	6 cut(s)	49, 733, 1012, 1013, 1181, 1376
BmiI	GGNNCC	3 cut(s)	785, 1014, 1062
BmrFI	CCNGG	1 cut(s)	1209
BmsI	GCATC	3 cut(s)	625, 1263, 1753
BoxI	GACNNNNGTC	1 cut(s)	333
BpiI	GAAGAC	2 cut(s)	21, 1506
Bpu14I	TTCGAA	1 cut(s)	1560
BpuEI	CTTGAG	2 cut(s)	1514, 1890
BsaHI	GRCGYC	1 cut(s)	1061
BsaI	GGTCTC	1 cut(s)	279
BsaJI	CCNNGG	3 cut(s)	157, 1432, 1632
BsaWI	WCCGGW	1 cut(s)	1701
BsaXI	ACNNNNNCTCC	2 cut(s)	1649, 1679
Bsc4I	CCNNNNNNNGG	2 cut(s)	163, 1190
Bse1I	ACTGG	1 cut(s)	1200
Bse21I	CCTNAGG	1 cut(s)	1344
Bse3DI	GCAATG	1 cut(s)	663
BseBI	CCWGG	1 cut(s)	1209
BseDI	CCNNGG	3 cut(s)	157, 1432, 1632
BseGI	GGATG	6 cut(s)	247, 565, 612, 1287, 1628, 1666
BseLI	CCNNNNNNNGG	2 cut(s)	163, 1190
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	2 cut(s)	1221, 1335
BseNI	ACTGG	1 cut(s)	1200
BseRI	GAGGAG	2 cut(s)	434, 971
BseSI	GKGCMC	2 cut(s)	185, 1016
BseXI	GCAGC	5 cut(s)	479, 664, 686, 734, 871
BseYI	CCCAGC	1 cut(s)	887
BsgI	GTGCAG	1 cut(s)	1318
Bsh1236I	CGCG	1 cut(s)	960
BshFI	GGCC	5 cut(s)	83, 578, 652, 734, 1014
BshNI	GGYRCC	2 cut(s)	783, 1060
BsiSI	CCGG	4 cut(s)	575, 1489, 1655, 1702
BslFI	GGGAC	3 cut(s)	904, 1325, 1483
BslI	CCNNNNNNNGG	2 cut(s)	163, 1190
BsmAI	GTCTC	3 cut(s)	168, 279, 1631
BsmFI	GGGAC	3 cut(s)	904, 1325, 1483
BsmI	GAATGC	1 cut(s)	1678
BsnI	GGCC	5 cut(s)	83, 578, 652, 734, 1014
Bso31I	GGTCTC	1 cut(s)	279
Bsp119I	TTCGAA	1 cut(s)	1560
Bsp120I	GGGCCC	1 cut(s)	1012
Bsp1286I	GDGCHC	2 cut(s)	185, 1016
Bsp143I	GATC	5 cut(s)	61, 90, 534, 828, 1371
BspACI	CCGC	6 cut(s)	342, 787, 1252, 1354, 1369, 1831
BspANI	GGCC	5 cut(s)	83, 578, 652, 734, 1014
BspCNI	CTCAG	2 cut(s)	1222, 1336
BspFNI	CGCG	1 cut(s)	960
BspLI	GGNNCC	3 cut(s)	785, 1014, 1062
BspMI	ACCTGC	1 cut(s)	1287
BspPI	GGATC	2 cut(s)	823, 1379
BspQI	GCTCTTC	1 cut(s)	1344
BspT104I	TTCGAA	1 cut(s)	1560
BspT107I	GGYRCC	2 cut(s)	783, 1060
BspTI	CTTAAG	1 cut(s)	1037
BspTNI	GGTCTC	1 cut(s)	279
BsrBI	CCGCTC	1 cut(s)	1354
BsrDI	GCAATG	1 cut(s)	663
BsrI	ACTGG	1 cut(s)	1200
BssECI	CCNNGG	3 cut(s)	157, 1432, 1632
BssMI	GATC	5 cut(s)	61, 90, 534, 828, 1371
BssNAI	GTATAC	1 cut(s)	1598
BssNI	GRCGYC	1 cut(s)	1061
Bst1107I	GTATAC	1 cut(s)	1598
Bst2UI	CCWGG	1 cut(s)	1209
Bst4CI	ACNGT	7 cut(s)	119, 1115, 1120, 1339, 1472, 1757, 1886
Bst6I	CTCTTC	2 cut(s)	989, 1344
BstACI	GRCGYC	1 cut(s)	1061
BstAFI	CTTAAG	1 cut(s)	1037
BstAPI	GCANNNNNTGC	2 cut(s)	514, 1682
BstBI	TTCGAA	1 cut(s)	1560
BstC8I	GCNNGC	4 cut(s)	732, 1236, 1284, 1554
BstDEI	CTNAG	3 cut(s)	1230, 1344, 1862
BstDSI	CCRYGG	2 cut(s)	1432, 1632
BstEII	GGTNACC	1 cut(s)	916
BstF5I	GGATG	6 cut(s)	247, 565, 612, 1287, 1628, 1666
BstFNI	CGCG	1 cut(s)	960
BstH2I	RGCGCY	2 cut(s)	1064, 1713
BstHHI	GCGC	3 cut(s)	960, 1063, 1712
BstKTI	GATC	5 cut(s)	64, 93, 537, 831, 1374
BstMAI	GTCTC	3 cut(s)	168, 279, 1631
BstMBI	GATC	5 cut(s)	61, 90, 534, 828, 1371
BstMWI	GCNNNNNNNGC	5 cut(s)	514, 674, 686, 893, 1682
BstNI	CCWGG	1 cut(s)	1209
BstNSI	RCATGY	3 cut(s)	380, 517, 1396
BstPAI	GACNNNNGTC	1 cut(s)	333
BstPI	GGTNACC	1 cut(s)	916
BstSCI	CCNGG	1 cut(s)	1207
BstSFI	CTRYAG	2 cut(s)	316, 681
BstSLI	GKGCMC	2 cut(s)	185, 1016
BstUI	CGCG	1 cut(s)	960
BstV1I	GCAGC	5 cut(s)	479, 664, 686, 734, 871
BstV2I	GAAGAC	2 cut(s)	21, 1506
BstXI	CCANNNNNNTGG	1 cut(s)	76
BstZ17I	GTATAC	1 cut(s)	1598
Bsu36I	CCTNAGG	1 cut(s)	1344
BsuRI	GGCC	5 cut(s)	83, 578, 652, 734, 1014
BtgI	CCRYGG	2 cut(s)	1432, 1632
BtsCI	GGATG	6 cut(s)	247, 565, 612, 1287, 1628, 1666
BtsIMutI	CAGTG	1 cut(s)	1891
BveI	ACCTGC	1 cut(s)	1287
Cac8I	GCNNGC	4 cut(s)	732, 1236, 1284, 1554
CaiI	CAGNNNCTG	1 cut(s)	1343
CfoI	GCGC	3 cut(s)	960, 1063, 1712
Cfr13I	GGNCC	6 cut(s)	49, 733, 1012, 1013, 1181, 1376
CseI	GACGC	1 cut(s)	1500
Csp6I	GTAC	7 cut(s)	962, 1031, 1116, 1205, 1217, 1247, 1321
CspCI	CAANNNNNGTGG	2 cut(s)	13, 48
CviAII	CATG	9 cut(s)	377, 497, 514, 547, 910, 1393, 1480, 1693, 1780
CviQI	GTAC	7 cut(s)	962, 1031, 1116, 1205, 1217, 1247, 1321
DdeI	CTNAG	3 cut(s)	1230, 1344, 1862
DinI	GGCGCC	1 cut(s)	1062
DpnI	GATC	5 cut(s)	63, 92, 536, 830, 1373
DpnII	GATC	5 cut(s)	61, 90, 534, 828, 1371
EaeI	YGGCCR	1 cut(s)	576
Eam1104I	CTCTTC	2 cut(s)	989, 1344
EarI	CTCTTC	2 cut(s)	989, 1344
EciI	GGCGGA	1 cut(s)	357
Eco24I	GRGCYC	1 cut(s)	1016
Eco31I	GGTCTC	1 cut(s)	279
Eco47I	GGWCC	3 cut(s)	49, 1181, 1376
Eco57I	CTGAAG	1 cut(s)	317
Eco81I	CCTNAGG	1 cut(s)	1344
Eco91I	GGTNACC	1 cut(s)	916
EcoO109I	RGGNCCY	3 cut(s)	733, 1012, 1013
EcoO65I	GGTNACC	1 cut(s)	916
EcoRI	GAATTC	1 cut(s)	500
EcoRII	CCWGG	1 cut(s)	1207
EcoT22I	ATGCAT	1 cut(s)	1146
EcoT38I	GRGCYC	1 cut(s)	1016
EgeI	GGCGCC	1 cut(s)	1062
EheI	GGCGCC	1 cut(s)	1062
FaeI	CATG	9 cut(s)	380, 500, 517, 550, 913, 1396, 1483, 1696, 1783
FalI	AAGNNNNNCTT	2 cut(s)	290, 322
FaqI	GGGAC	3 cut(s)	904, 1325, 1483
FatI	CATG	9 cut(s)	376, 496, 513, 546, 909, 1392, 1479, 1692, 1779
FauI	CCCGC	1 cut(s)	1259
FbaI	TGATCA	1 cut(s)	61
FblI	GTMKAC	3 cut(s)	373, 1535, 1597
Fnu4HI	GCNGC	6 cut(s)	6, 468, 675, 678, 748, 885
FokI	GGATG	6 cut(s)	254, 572, 619, 1274, 1615, 1673
FriOI	GRGCYC	1 cut(s)	1016
Fsp4HI	GCNGC	6 cut(s)	6, 468, 675, 678, 748, 885
FspBI	CTAG	3 cut(s)	1220, 1239, 1806
GlaI	GCGC	3 cut(s)	959, 1062, 1711
GluI	GCNGC	6 cut(s)	6, 468, 675, 678, 748, 885
GsaI	CCCAGC	1 cut(s)	891
HaeII	RGCGCY	2 cut(s)	1064, 1713
HaeIII	GGCC	5 cut(s)	83, 578, 652, 734, 1014
HapII	CCGG	4 cut(s)	575, 1489, 1655, 1702
HgaI	GACGC	1 cut(s)	1500
HhaI	GCGC	3 cut(s)	960, 1063, 1712
Hin1I	GRCGYC	1 cut(s)	1061
Hin1II	CATG	9 cut(s)	380, 500, 517, 550, 913, 1396, 1483, 1696, 1783
Hin6I	GCGC	3 cut(s)	958, 1061, 1710
HinP1I	GCGC	3 cut(s)	958, 1061, 1710
HincII	GTYRAC	1 cut(s)	374
HindII	GTYRAC	1 cut(s)	374
HindIII	AAGCTT	1 cut(s)	1554
HinfI	GANTC	8 cut(s)	474, 571, 759, 820, 970, 1496, 1562, 1814
HpaII	CCGG	4 cut(s)	575, 1489, 1655, 1702
HphI	GGTGA	5 cut(s)	464, 562, 910, 952, 979
Hpy166II	GTNNAC	6 cut(s)	374, 699, 1205, 1536, 1598, 1777
Hpy188I	TCNGA	5 cut(s)	297, 1185, 1231, 1376, 1519
Hpy188III	TCNNGA	7 cut(s)	218, 478, 806, 1093, 1566, 1907, 1918
Hpy8I	GTNNAC	6 cut(s)	374, 699, 1205, 1536, 1598, 1777
Hpy99I	CGWCG	1 cut(s)	1592
HpyAV	CCTTC	1 cut(s)	1043
HpyCH4III	ACNGT	7 cut(s)	119, 1115, 1120, 1339, 1472, 1757, 1886
HpyCH4IV	ACGT	2 cut(s)	408, 1590
HpyF10VI	GCNNNNNNNGC	5 cut(s)	514, 674, 686, 893, 1682
HpyF3I	CTNAG	3 cut(s)	1230, 1344, 1862
HpySE526I	ACGT	2 cut(s)	408, 1590
Hsp92I	GRCGYC	1 cut(s)	1061
Hsp92II	CATG	9 cut(s)	380, 500, 517, 550, 913, 1396, 1483, 1696, 1783
HspAI	GCGC	3 cut(s)	958, 1061, 1710
KasI	GGCGCC	1 cut(s)	1060
Ksp22I	TGATCA	1 cut(s)	61
Kzo9I	GATC	5 cut(s)	61, 90, 534, 828, 1371
LguI	GCTCTTC	1 cut(s)	1344
LmnI	GCTCC	1 cut(s)	251
Lsp1109I	GCAGC	5 cut(s)	479, 664, 686, 734, 871
LweI	GCATC	3 cut(s)	625, 1263, 1753
MaeI	CTAG	3 cut(s)	1220, 1239, 1806
MaeII	ACGT	2 cut(s)	408, 1590
MaeIII	GTNAC	5 cut(s)	409, 424, 844, 916, 1695
MalI	GATC	5 cut(s)	63, 92, 536, 830, 1373
MbiI	CCGCTC	1 cut(s)	1354
MboI	GATC	5 cut(s)	61, 90, 534, 828, 1371
MboII	GAAGA	8 cut(s)	26, 100, 976, 1249, 1361, 1506, 1879, 1888
MfeI	CAATTG	1 cut(s)	669
MhlI	GDGCHC	2 cut(s)	185, 1016
MluCI	AATT	8 cut(s)	500, 669, 723, 814, 1108, 1384, 1623, 1819
Mly113I	GGCGCC	1 cut(s)	1061
MlyI	GAGTC	3 cut(s)	565, 768, 1505
MmeI	TCCRAC	3 cut(s)	229, 468, 1906
Mph1103I	ATGCAT	1 cut(s)	1146
MseI	TTAA	4 cut(s)	726, 813, 858, 1038
MslI	CAYNNNNRTG	3 cut(s)	74, 842, 1139
MspA1I	CMGCKG	3 cut(s)	596, 677, 851
MspCI	CTTAAG	1 cut(s)	1037
MspI	CCGG	4 cut(s)	575, 1489, 1655, 1702
MspR9I	CCNGG	1 cut(s)	1209
MunI	CAATTG	1 cut(s)	669
Mva1269I	GAATGC	1 cut(s)	1678
MvaI	CCWGG	1 cut(s)	1209
MvnI	CGCG	1 cut(s)	960
MwoI	GCNNNNNNNGC	5 cut(s)	514, 674, 686, 893, 1682
NarI	GGCGCC	1 cut(s)	1061
NdeII	GATC	5 cut(s)	61, 90, 534, 828, 1371
NlaIII	CATG	9 cut(s)	380, 500, 517, 550, 913, 1396, 1483, 1696, 1783
NlaIV	GGNNCC	3 cut(s)	785, 1014, 1062
NmeAIII	GCCGAG	1 cut(s)	1744
NmuCI	GTSAC	3 cut(s)	844, 916, 1695
NsiI	ATGCAT	1 cut(s)	1146
NspI	RCATGY	3 cut(s)	380, 517, 1396
NspV	TTCGAA	1 cut(s)	1560
PciI	ACATGT	1 cut(s)	1392
PciSI	GCTCTTC	1 cut(s)	1344
PctI	GAATGC	1 cut(s)	1678
PfeI	GAWTC	5 cut(s)	474, 820, 970, 1562, 1814
PflFI	GACNNNGTC	2 cut(s)	1179, 1693
PkrI	GCNGC	6 cut(s)	7, 469, 676, 679, 749, 886
PleI	GAGTC	3 cut(s)	565, 767, 1504
PluTI	GGCGCC	1 cut(s)	1064
PpsI	GAGTC	3 cut(s)	565, 767, 1504
PscI	ACATGT	1 cut(s)	1392
PshAI	GACNNNNGTC	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	1271
Psp6I	CCWGG	1 cut(s)	1207
PspEI	GGTNACC	1 cut(s)	916
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	1 cut(s)	1207
PspN4I	GGNNCC	3 cut(s)	785, 1014, 1062
PspOMI	GGGCCC	1 cut(s)	1012
PspPI	GGNCC	6 cut(s)	49, 733, 1012, 1013, 1181, 1376
PstNI	CAGNNNCTG	1 cut(s)	1343
PsyI	GACNNNGTC	2 cut(s)	1179, 1693
PvuII	CAGCTG	3 cut(s)	596, 677, 851
RsaI	GTAC	7 cut(s)	963, 1032, 1117, 1206, 1218, 1248, 1322
RsaNI	GTAC	7 cut(s)	962, 1031, 1116, 1205, 1217, 1247, 1321
RseI	CAYNNNNRTG	3 cut(s)	74, 842, 1139
SalI	GTCGAC	1 cut(s)	372
SapI	GCTCTTC	1 cut(s)	1344
SaqAI	TTAA	4 cut(s)	726, 813, 858, 1038
SatI	GCNGC	6 cut(s)	6, 468, 675, 678, 748, 885
Sau3AI	GATC	5 cut(s)	61, 90, 534, 828, 1371
Sau96I	GGNCC	6 cut(s)	49, 733, 1012, 1013, 1181, 1376
ScaI	AGTACT	1 cut(s)	1218
SchI	GAGTC	3 cut(s)	565, 768, 1505
ScrFI	CCNGG	1 cut(s)	1209
SduI	GDGCHC	2 cut(s)	185, 1016
SfaNI	GCATC	3 cut(s)	625, 1263, 1753
SfcI	CTRYAG	2 cut(s)	316, 681
SfoI	GGCGCC	1 cut(s)	1062
SfuI	TTCGAA	1 cut(s)	1560
SinI	GGWCC	3 cut(s)	49, 1181, 1376
SmiMI	CAYNNNNRTG	3 cut(s)	74, 842, 1139
SmlI	CTYRAG	3 cut(s)	1037, 1493, 1905
SmoI	CTYRAG	3 cut(s)	1037, 1493, 1905
SpeI	ACTAGT	1 cut(s)	1219
Sse9I	AATT	8 cut(s)	500, 669, 723, 814, 1108, 1384, 1623, 1819
SsiI	CCGC	6 cut(s)	342, 787, 1252, 1354, 1369, 1831
SspDI	GGCGCC	1 cut(s)	1060
SspMI	CTAG	3 cut(s)	1220, 1239, 1806
StyD4I	CCNGG	1 cut(s)	1207
TaaI	ACNGT	7 cut(s)	119, 1115, 1120, 1339, 1472, 1757, 1886
TaiI	ACGT	2 cut(s)	411, 1593
TaqI	TCGA	2 cut(s)	373, 1560
TasI	AATT	8 cut(s)	500, 669, 723, 814, 1108, 1384, 1623, 1819
TatI	WGTACW	2 cut(s)	1030, 1216
TfiI	GAWTC	5 cut(s)	474, 820, 970, 1562, 1814
Tru1I	TTAA	4 cut(s)	726, 813, 858, 1038
Tru9I	TTAA	4 cut(s)	726, 813, 858, 1038
TscAI	CASTG	1 cut(s)	1891
TseFI	GTSAC	3 cut(s)	844, 916, 1695
TseI	GCWGC	6 cut(s)	5, 467, 674, 677, 747, 884
Tsp45I	GTSAC	3 cut(s)	844, 916, 1695
TspDTI	ATGAA	9 cut(s)	111, 351, 513, 623, 1062, 1468, 1617, 1745, 1845
TspGWI	ACGGA	2 cut(s)	1388, 1621
TspRI	CASTG	1 cut(s)	1891
Tth111I	GACNNNGTC	2 cut(s)	1179, 1693
Vha464I	CTTAAG	1 cut(s)	1037
VpaK11BI	GGWCC	3 cut(s)	49, 1181, 1376
XapI	RAATTY	1 cut(s)	500
XceI	RCATGY	3 cut(s)	380, 517, 1396
XcmI	CCANNNNNNNNNTGG	1 cut(s)	813
XmiI	GTMKAC	3 cut(s)	373, 1535, 1597
XspI	CTAG	3 cut(s)	1220, 1239, 1806
ZrmI	AGTACT	1 cut(s)	1218
Zsp2I	ATGCAT	1 cut(s)	1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.