Rorug05G0060000

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
5242180 .. 5244333
2154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0060000.1

Sequence Viewer

Length: 1359 bp
ATGGAGCAAATTACAAAGGGAAAGAGGTTGATCTTGTTCCCTGTTCCCCTTGAAGGCCATATAAACCCCATGCTAAAGCTAGCCAATCTTCTCTACTCCAAAGGCTTCTCCATAACCATCATCCACACCCAATTTAACTTCCCAAACCCTTCACTCCATCCACACTTCACCTTTCGCTCAATCCCAGATGGGTTGTCTGAAACTGAGGCTTCCCCCGAAGATATCATCCATCTCTTCTCTCTTTTCAATACTAAATGTGTTGAACCCTTCAAGGATTGCTTGTGTAGCTTGTTATCAGAGGAGCCTGTTGCTTGTTTGATCTCTGACTCTATATTCCATTTCACTCATTCTGTTGCTGAGAGCTTTAAGCTCCCAAGGATTGTCTTTGAGACCGGGGGCATGACTTCCTATGCTGTTTTTACTCAATTTCCACTACTAAAAGAAAAAGGCTACATTCCGGTCACGCAAGATTCTCAACTAGAAAAGGTGGTGACGGAGCTTCCACCTCTCAGAATCAAAGACCTTCCGGTGTTCCCAAAGGGCGACCCGGAGAAACATTTTGAACTATGTGTAGTTATTGTGGCCAAAGTTGCAGCCTCTGATGGAGTCATTTTTAACACTTTTAGAGATCTTGAAGAACAAGGACTGGCAACATTGCACAAACAATTCCCTAATCTTCCGGTTTTCCCAATAGGCCCATTCCACAAGTGTGTCCCTGAGGAAGCCTCTTCTTCAACTAGTGACCAAAGTTGCATTTCTTGGCTAAACACTCGAGCACCTAACTCTGTTATTTATGTTAGCTTTGGGACCATTGCAGCAATAACCAAGACGCAGTTTTTGGAGATAGCTTGGGGATTAGCCAACAGCCACCAACCTTTCTTGTGGGTGGTTCGACCTGGCTTAGTCCATGAGTCAGACTGGCTTGAATCATTGCCTTATTTGCCTACTGGATTTCTTGAGAATTTGAATGAGAGGGGTCACATTGTGAAATGGGCACCCCAAAAAGAAGTGTTGGCACATCCATCAGTTGGAGCTTTTTGGACTCACAATGGTTGGAATTCTACATTGGAGAGCGTCTGTGAAGGTGTCCCTATGATTTGTATGCCTTGTTTCAGTGATCAACTGGTGCTTGCAAGGTACGTAAGTAAGGTTTGGAAAATTGGGTTGCAGTTTGAGAATGGAATTGAGAGAGGTGATATTGAAGGAACAATTAGGAAACTAATGGAGGAGAAAGAAGGAGAAGAAATCAGAGACAGAAGCTTGAAGCTAATGGAGAAAGCAAATGTTTGCTTCAAACCAGGTGGATCTTCATGCCAATGCTTGGATGACTTGGTCAAACATATTTTATCATTTGAATAA

Protein Analysis

452

Amino Acids

50.8

Weight (kDa)

5.69

Isoelectric Point (pI)

44.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 253 - 411 6.3e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 994
AccB7I CCANNNNNTGG 2 cut(s) 1028, 1321
AclWI GGATC 1 cut(s) 1312
AcoI YGGCCR 1 cut(s) 582
AcsI RAATTY 2 cut(s) 961, 1057
AdeI CACNNNGTG 1 cut(s) 985
AfaI GTAC 1 cut(s) 1139
AfiI CCNNNNNNNGG 3 cut(s) 53, 1028, 1321
AhlI ACTAGT 1 cut(s) 737
AjnI CCWGG 2 cut(s) 895, 1297
AjuI GAANNNNNNNTTGG 2 cut(s) 1049, 1081
AleI CACNNNNGTG 1 cut(s) 708
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 2 cut(s) 383, 1245
AlwI GGATC 1 cut(s) 1312
AlwNI CAGNNNCTG 1 cut(s) 599
Ama87I CYCGRG 1 cut(s) 771
AoxI GGCC 3 cut(s) 55, 582, 694
ApeKI GCWGC 2 cut(s) 593, 815
ApoI RAATTY 2 cut(s) 961, 1057
ArsI GACNNNNNNTTYG 2 cut(s) 820, 852
AspS9I GGNCC 2 cut(s) 695, 807
AsuC2I CCSGG 2 cut(s) 394, 548
AsuHPI GGTGA 3 cut(s) 160, 502, 1205
AsuNHI GCTAGC 1 cut(s) 79
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 1 cut(s) 807
AxyI CCTNAGG 1 cut(s) 717
BaeGI GKGCMC 1 cut(s) 997
BaeI ACNNNNGTAYC 2 cut(s) 1129, 1162
BalI TGGCCA 1 cut(s) 584
BanI GGYRCC 1 cut(s) 994
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 2 cut(s) 605, 827
BccI CCATC 6 cut(s) 125, 165, 182, 237, 596, 1030
BciT130I CCWGG 2 cut(s) 897, 1299
BclI TGATCA 1 cut(s) 1117
BcnI CCSGG 2 cut(s) 394, 548
BcoDI GTCTC 2 cut(s) 383, 1245
BcuI ACTAGT 1 cut(s) 737
BfaI CTAG 3 cut(s) 80, 479, 738
BglII AGATCT 1 cut(s) 628
BisI GCNGC 2 cut(s) 594, 816
BlsI GCNGC 2 cut(s) 595, 817
Bme1390I CCNGG 4 cut(s) 394, 548, 897, 1299
Bme18I GGWCC 1 cut(s) 807
BmeT110I CYCGRG 1 cut(s) 771
BmgT120I GGNCC 2 cut(s) 695, 807
BmiI GGNNCC 3 cut(s) 303, 808, 996
BmrFI CCNGG 4 cut(s) 394, 548, 897, 1299
BmtI GCTAGC 1 cut(s) 83
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpuEI CTTGAG 1 cut(s) 977
BpuMI CCSGG 2 cut(s) 394, 548
BsaAI YACGTR 1 cut(s) 1141
BsaI GGTCTC 1 cut(s) 383
BsaJI CCNNGG 2 cut(s) 374, 393
BsaWI WCCGGW 3 cut(s) 457, 526, 679
Bsc4I CCNNNNNNNGG 3 cut(s) 53, 1028, 1321
Bse1I ACTGG 4 cut(s) 651, 923, 952, 1128
Bse21I CCTNAGG 1 cut(s) 717
Bse3DI GCAATG 3 cut(s) 653, 810, 929
BseBI CCWGG 2 cut(s) 897, 1299
BseDI CCNNGG 2 cut(s) 374, 393
BseGI GGATG 5 cut(s) 120, 157, 225, 1018, 1330
BseLI CCNNNNNNNGG 3 cut(s) 53, 1028, 1321
BseMI GCAATG 3 cut(s) 653, 810, 929
BseMII CTCAG 4 cut(s) 195, 348, 523, 708
BseNI ACTGG 4 cut(s) 651, 923, 952, 1128
BseRI GAGGAG 2 cut(s) 314, 1241
BseSI GKGCMC 1 cut(s) 997
BseXI GCAGC 2 cut(s) 605, 827
BshFI GGCC 3 cut(s) 57, 584, 696
BshNI GGYRCC 1 cut(s) 994
BsiHKAI GWGCWC 1 cut(s) 778
BsiHKCI CYCGRG 1 cut(s) 771
BsiSI CCGG 5 cut(s) 393, 458, 527, 548, 680
BslFI GGGAC 3 cut(s) 698, 820, 1073
BslI CCNNNNNNNGG 3 cut(s) 53, 1028, 1321
BsmAI GTCTC 2 cut(s) 383, 1245
BsmFI GGGAC 3 cut(s) 698, 820, 1073
BsnI GGCC 3 cut(s) 57, 584, 696
Bso31I GGTCTC 1 cut(s) 383
BsoBI CYCGRG 1 cut(s) 771
Bsp1286I GDGCHC 2 cut(s) 778, 997
Bsp143I GATC 5 cut(s) 30, 318, 628, 1117, 1304
BspANI GGCC 3 cut(s) 57, 584, 696
BspCNI CTCAG 4 cut(s) 196, 349, 522, 709
BspLI GGNNCC 3 cut(s) 303, 808, 996
BspOI GCTAGC 1 cut(s) 83
BspPI GGATC 1 cut(s) 1312
BspT107I GGYRCC 1 cut(s) 994
BspTNI GGTCTC 1 cut(s) 383
BsrDI GCAATG 3 cut(s) 653, 810, 929
BsrI ACTGG 4 cut(s) 651, 923, 952, 1128
BssECI CCNNGG 2 cut(s) 374, 393
BssMI GATC 5 cut(s) 30, 318, 628, 1117, 1304
BssT1I CCWWGG 1 cut(s) 374
Bst2UI CCWGG 2 cut(s) 897, 1299
Bst6I CTCTTC 2 cut(s) 239, 733
BstBAI YACGTR 1 cut(s) 1141
BstC8I GCNNGC 2 cut(s) 81, 1131
BstDEI CTNAG 5 cut(s) 204, 357, 509, 717, 901
BstF5I GGATG 5 cut(s) 120, 157, 225, 1018, 1330
BstKTI GATC 5 cut(s) 33, 321, 631, 1120, 1307
BstMAI GTCTC 2 cut(s) 383, 1245
BstMBI GATC 5 cut(s) 30, 318, 628, 1117, 1304
BstMWI GCNNNNNNNGC 3 cut(s) 285, 590, 940
BstNI CCWGG 2 cut(s) 897, 1299
BstSCI CCNGG 4 cut(s) 392, 546, 895, 1297
BstSLI GKGCMC 1 cut(s) 997
BstSNI TACGTA 1 cut(s) 1141
BstV1I GCAGC 2 cut(s) 605, 827
BstX2I RGATCY 2 cut(s) 628, 1304
BstYI RGATCY 2 cut(s) 628, 1304
Bsu36I CCTNAGG 1 cut(s) 717
BsuRI GGCC 3 cut(s) 57, 584, 696
BtsCI GGATG 5 cut(s) 120, 157, 225, 1018, 1330
BtsIMutI CAGTG 1 cut(s) 1120
Cac8I GCNNGC 2 cut(s) 81, 1131
CaiI CAGNNNCTG 1 cut(s) 599
Cfr13I GGNCC 2 cut(s) 695, 807
CseI GACGC 2 cut(s) 838, 1063
CsiI ACCWGGT 1 cut(s) 1297
Csp6I GTAC 1 cut(s) 1138
CspCI CAANNNNNGTGG 2 cut(s) 1282, 1317
CviAII CATG 4 cut(s) 70, 400, 908, 1311
CviQI GTAC 1 cut(s) 1138
DdeI CTNAG 5 cut(s) 204, 357, 509, 717, 901
DpnI GATC 5 cut(s) 32, 320, 630, 1119, 1306
DpnII GATC 5 cut(s) 30, 318, 628, 1117, 1304
DraIII CACNNNGTG 1 cut(s) 985
EaeI YGGCCR 1 cut(s) 582
Eam1104I CTCTTC 2 cut(s) 239, 733
EarI CTCTTC 2 cut(s) 239, 733
Eco105I TACGTA 1 cut(s) 1141
Eco130I CCWWGG 1 cut(s) 374
Eco31I GGTCTC 1 cut(s) 383
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 1 cut(s) 807
Eco81I CCTNAGG 1 cut(s) 717
Eco88I CYCGRG 1 cut(s) 771
EcoRI GAATTC 1 cut(s) 1057
EcoRII CCWGG 2 cut(s) 895, 1297
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 374
ErhI CCWWGG 1 cut(s) 374
FaeI CATG 4 cut(s) 73, 403, 911, 1314
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 3 cut(s) 698, 820, 1073
FatI CATG 4 cut(s) 69, 399, 907, 1310
FbaI TGATCA 1 cut(s) 1117
Fnu4HI GCNGC 2 cut(s) 594, 816
FokI GGATG 5 cut(s) 107, 144, 212, 1005, 1337
Fsp4HI GCNGC 2 cut(s) 594, 816
FspBI CTAG 3 cut(s) 80, 479, 738
GluI GCNGC 2 cut(s) 594, 816
HaeIII GGCC 3 cut(s) 57, 584, 696
HapII CCGG 5 cut(s) 393, 458, 527, 548, 680
HgaI GACGC 2 cut(s) 838, 1063
Hin1II CATG 4 cut(s) 73, 403, 911, 1314
HindIII AAGCTT 1 cut(s) 1258
HinfI GANTC 7 cut(s) 326, 470, 513, 606, 911, 926, 1042
HpaII CCGG 5 cut(s) 393, 458, 527, 548, 680
HphI GGTGA 3 cut(s) 160, 502, 1205
Hpy188I TCNGA 7 cut(s) 199, 298, 325, 512, 601, 916, 1250
Hpy188III TCNNGA 2 cut(s) 632, 956
HpyAV CCTTC 7 cut(s) 47, 159, 277, 533, 1076, 1196, 1229
HpyCH4IV ACGT 1 cut(s) 1140
HpyCH4V TGCA 6 cut(s) 593, 658, 753, 815, 1133, 1168
HpyF10VI GCNNNNNNNGC 3 cut(s) 285, 590, 940
HpyF3I CTNAG 5 cut(s) 204, 357, 509, 717, 901
HpySE526I ACGT 1 cut(s) 1140
Hsp92II CATG 4 cut(s) 73, 403, 911, 1314
Ksp22I TGATCA 1 cut(s) 1117
Kzo9I GATC 5 cut(s) 30, 318, 628, 1117, 1304
LmnI GCTCC 5 cut(s) 4, 301, 375, 496, 1031
Lsp1109I GCAGC 2 cut(s) 605, 827
MabI ACCWGGT 1 cut(s) 1297
MaeI CTAG 3 cut(s) 80, 479, 738
MaeII ACGT 1 cut(s) 1140
MaeIII GTNAC 4 cut(s) 460, 490, 740, 977
MalI GATC 5 cut(s) 32, 320, 630, 1119, 1306
MboI GATC 5 cut(s) 30, 318, 628, 1117, 1304
MboII GAAGA 9 cut(s) 80, 226, 230, 647, 668, 720, 723, 1253, 1299
MflI RGATCY 2 cut(s) 628, 1304
MhlI GDGCHC 2 cut(s) 778, 997
MlsI TGGCCA 1 cut(s) 584
MluCI AATT 9 cut(s) 9, 131, 425, 665, 961, 1057, 1158, 1182, 1209
MluNI TGGCCA 1 cut(s) 584
MlyI GAGTC 4 cut(s) 320, 615, 920, 1036
MmeI TCCRAC 2 cut(s) 1009, 1034
Mox20I TGGCCA 1 cut(s) 584
MscI TGGCCA 1 cut(s) 584
MseI TTAA 3 cut(s) 135, 366, 615
MslI CAYNNNNRTG 2 cut(s) 708, 1315
Msp20I TGGCCA 1 cut(s) 584
MspI CCGG 5 cut(s) 393, 458, 527, 548, 680
MspR9I CCNGG 4 cut(s) 394, 548, 897, 1299
MvaI CCWGG 2 cut(s) 897, 1299
MwoI GCNNNNNNNGC 3 cut(s) 285, 590, 940
NciI CCSGG 2 cut(s) 394, 548
NdeII GATC 5 cut(s) 30, 318, 628, 1117, 1304
NheI GCTAGC 1 cut(s) 79
NlaIII CATG 4 cut(s) 73, 403, 911, 1314
NlaIV GGNNCC 3 cut(s) 303, 808, 996
NmuCI GTSAC 4 cut(s) 460, 490, 740, 977
OliI CACNNNNGTG 1 cut(s) 708
PaeR7I CTCGAG 1 cut(s) 771
PfeI GAWTC 3 cut(s) 470, 513, 926
PflFI GACNNNGTC 1 cut(s) 1331
PflMI CCANNNNNTGG 2 cut(s) 1028, 1321
PkrI GCNGC 2 cut(s) 595, 817
PleI GAGTC 4 cut(s) 320, 614, 919, 1036
PpsI GAGTC 4 cut(s) 320, 614, 919, 1036
Ppu21I YACGTR 1 cut(s) 1141
Psp6I CCWGG 2 cut(s) 895, 1297
PspGI CCWGG 2 cut(s) 895, 1297
PspN4I GGNNCC 3 cut(s) 303, 808, 996
PspPI GGNCC 2 cut(s) 695, 807
PspXI VCTCGAGB 1 cut(s) 771
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 2 cut(s) 628, 1304
PsyI GACNNNGTC 1 cut(s) 1331
RsaI GTAC 1 cut(s) 1139
RsaNI GTAC 1 cut(s) 1138
RseI CAYNNNNRTG 2 cut(s) 708, 1315
SaqAI TTAA 3 cut(s) 135, 366, 615
SatI GCNGC 2 cut(s) 594, 816
Sau3AI GATC 5 cut(s) 30, 318, 628, 1117, 1304
Sau96I GGNCC 2 cut(s) 695, 807
SchI GAGTC 4 cut(s) 320, 615, 920, 1036
ScrFI CCNGG 4 cut(s) 394, 548, 897, 1299
SduI GDGCHC 2 cut(s) 778, 997
SexAI ACCWGGT 1 cut(s) 1297
Sfr274I CTCGAG 1 cut(s) 771
SinI GGWCC 1 cut(s) 807
SlaI CTCGAG 1 cut(s) 771
SmiMI CAYNNNNRTG 2 cut(s) 708, 1315
SmlI CTYRAG 2 cut(s) 771, 956
SmoI CTYRAG 2 cut(s) 771, 956
SnaBI TACGTA 1 cut(s) 1141
SpeI ACTAGT 1 cut(s) 737
Sse9I AATT 9 cut(s) 9, 131, 425, 665, 961, 1057, 1158, 1182, 1209
SspMI CTAG 3 cut(s) 80, 479, 738
StyD4I CCNGG 4 cut(s) 392, 546, 895, 1297
StyI CCWWGG 1 cut(s) 374
TaiI ACGT 1 cut(s) 1143
TaqI TCGA 2 cut(s) 772, 892
TasI AATT 9 cut(s) 9, 131, 425, 665, 961, 1057, 1158, 1182, 1209
TfiI GAWTC 3 cut(s) 470, 513, 926
Tru1I TTAA 3 cut(s) 135, 366, 615
Tru9I TTAA 3 cut(s) 135, 366, 615
TscAI CASTG 1 cut(s) 1120
TseFI GTSAC 4 cut(s) 460, 490, 740, 977
TseI GCWGC 2 cut(s) 593, 815
Tsp45I GTSAC 4 cut(s) 460, 490, 740, 977
TspDTI ATGAA 1 cut(s) 1299
TspGWI ACGGA 1 cut(s) 509
TspRI CASTG 1 cut(s) 1120
Tth111I GACNNNGTC 1 cut(s) 1331
Van91I CCANNNNNTGG 2 cut(s) 1028, 1321
VpaK11BI GGWCC 1 cut(s) 807
XapI RAATTY 2 cut(s) 961, 1057
XhoI CTCGAG 1 cut(s) 771
XspI CTAG 3 cut(s) 80, 479, 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.