RchiOBHm_Chr5g0020461

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000477
Physical Location & Seq
Forward (+)
14664688 .. 14670483
5796 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30055

Sequence Viewer

Length: 2376 bp
ATGGCTGCACAGGAAGACCCTGACAAAAAAGGTGGTGTCTGGGTTTTGGACCAGCAACTTGATCAGCCCATTGATGTGGAGGCCAAGAAGGTCAAAGAAACGAACATTCACAAGAACTGTTCATCAATGATGCTTCTGCAACTTGCATTTCAAAGCCTCGGTGTGGTCTATGGAGACTTGGGCACATCTCCTTTATATGTATTCTATAATATATTTCCTGATGGGGTTGATGACAAAGAGGATGTTGTTGGAGCTTTATCTGTGATTATATGGTCTCTTACTTTCGTTCCACTTCTGAAGTATGTCTTTATTGTCTGTAGAGCAAATGACAATGGTCAAGGCGGAACATTTGCTCTTTATTCATTACTTTGTCGACATGCAAAAATAAAGAGTGTTCCTAACCAAGATGTAACTGATGAGGAGGTAACAACATTTAGTCGTTCTACATTTGGTGAGAAATCATTTGCAGCAAGAATCAAGAGGGGGTTGGAGAAACATGAATTCTTGCAGAACTTGCTTCTTATCCTTGTGCTGATCGGCTCTTGCATGGTGATTGGGGATGGGATTTTGACTCCGGCCATATCAGTTCTTTCAGCTGTTGGTGGGATGAATGTGCATCACAAGGGGATTAGTAAGGAAATGGTCGTGCTCTTTGCTGTTGCCATACTGGTACTTTTGTTTATCATGCAACAATATGGCACAGGCAAAGTTTGGTGGCTGTTTGCACCAATAGTACTTTTTTGGCTTCTCTTAATTGGAGGAATTGGCATCTTCAACATTAAGAAGTATGATAGTAGCATTTTAAAAGCCTTTTCACCAGTGTATATGTATCGATATTTTAAGAGGAGAGGTCGACCTGGGTGGGAGTCTCTAGGAGGTATTATGCTTAGTATAAACGGCACAGAAACACTTTTCGCTGACCTAAACCATTTCCCAGTCCTGTCCATACAGATTGCTTTTACGGTAGTTGTATTTCCTTGCCTTCTTTTAGCATACTGTGGTCAAGCTGCGTACCTCATGAAAAATTCCAACAATATGGACCGTGCTTTTTATCAGTCTGTTCCAGACACTATATATTGGCCTGTGTATGTCATTGCAATTGCAGCTGCTATAGTTGCAAGTCAGTCCACCATAACAGCAACTTTTTCACTAATTAAGCAGGCCCTTTCACTTGGCTGCTTCCCAAGAGTCAAAGTTATATATACTTCAAGGCACCGCCACCAGATATATATTCCAGATGTTAATTGGATTCTTATGATCCTCTGCATTTCTGTGACAGCTGGATTTAACCAAAAAACCCAGATTGGAAATGCTGCTGGGACGGCCGTTGTTATAGTCATGTTGGTCACCACTTTTCTTATGACTTTGGTGATGATATTAGTGTGGCGCGTACATTGGATTTTTGTCCTCCTCTTCACCAGCTTATCATTACTGGTGGAGGGCCCTTACCTATCTGCTGTACTCCTTAAGGTTGATGAAGGTGGTTGGGCGCCTCTTGTGATTGCAACAGCTTTCTTTATCGTGATGTATGTTTGGAATTACGGTACTGTAAGACGATATGACATTGAAATGCATAGTAAGGTGTCAATGGCTTGGATTATTGGACTTGGTCCAAGTTTAGGACTGGTTCGTGTACCTGGCATAGTACTAGTGTATTCTGAGCTTGCTAGTGGAGTACCCCGTATCTTCTCTCACTTTATAACCAACCTGCCTGCCATCCATTCGGTTGTCATATTTGTCTGCGTGAAGTACCTCCCTGTCTGTACAGTCCCTGAGGAAGAGCGGTTCTTTGTAAAGCGGATCGGACCTAATAATTTCCACATGTTCCGTTGTTTTGTGAGATATGGCTACAAAGATGACCACAGGAAAGATGATGATTTTGAGGAAAAGCTCTTTGACAGTCTTTTCATGTATATCCGGCTTGAGTCCCTAATGGAAGCGTCTTCTGATACTGATGATGTGTCTTCTATACTTGACCAGCAAGCTTTCGAATCAAGAGAAATCCCGTTTGACAACAACGTTAGTATACCTTTCTCCAATGCAGACCTCACAATTTCATCCGTGGAGACAATGACAATAACGCCGGAGGATGTGTCATTGAATGCAAGTCGTGCATTGACGATGTCACACCGGACAAGCGCCAATGCCGAGATTGAGATGAATGAGGTAGAATACTTGCACAACTGTAAAGATGCAGGGGTAGTTCACATGATGGGAAACACCATAGTAAGAGCTAGGAGGGATTCTAATTTTGTGAAGCGGATAGTTATAGATTATCTGTATTCATTTCTTAGGAAGATATGCAGGGGAAACAGTGTATTGTTCTTCGTTCCTCAAGAGAGCCTCTTGAATGTTGGACAGATACTCTATGTATAA

Protein Analysis

791

Amino Acids

88.89

Weight (kDa)

6.79

Isoelectric Point (pI)

37.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 48 - 533 1.1e-152 K+ potassium transporter integral membrane domain
K_trans_C PF22776 546 - 788 2.3e-23 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1700
Acc36I ACCTGC 1 cut(s) 1716
AccB1I GGYRCC 2 cut(s) 1212, 1489
AccBSI CCGCTC 1 cut(s) 1783
AccI GTMKAC 3 cut(s) 373, 853, 2026
AccII CGCG 1 cut(s) 1389
AciI CCGC 5 cut(s) 342, 1216, 1783, 1798, 2260
AclI AACGTT 1 cut(s) 2019
AclWI GGATC 2 cut(s) 1252, 1808
AcoI YGGCCR 2 cut(s) 576, 1323
AcsI RAATTY 2 cut(s) 500, 1024
AcuI CTGAAG 1 cut(s) 317
AcyI GRCGYC 1 cut(s) 1490
AfiI CCNNNNNNNGG 2 cut(s) 163, 1619
AflII CTTAAG 1 cut(s) 1466
AflIII ACRYGT 1 cut(s) 1821
AgsI TTSAA 6 cut(s) 152, 775, 1209, 1568, 2101, 2350
AhlI ACTAGT 1 cut(s) 1648
AjnI CCWGG 2 cut(s) 856, 1636
AloI GAACNNNNNNTCC 2 cut(s) 1769, 1801
Alw21I GWGCWC 1 cut(s) 651
Alw26I GTCTC 4 cut(s) 168, 279, 873, 2060
AlwI GGATC 2 cut(s) 1252, 1808
AlwNI CAGNNNCTG 1 cut(s) 1772
AoxI GGCC 6 cut(s) 81, 576, 1079, 1161, 1323, 1441
ApaI GGGCCC 1 cut(s) 1445
ApeKI GCWGC 7 cut(s) 5, 467, 1007, 1103, 1106, 1176, 1313
ApoI RAATTY 2 cut(s) 500, 1024
AspLEI GCGC 3 cut(s) 1389, 1492, 2141
AspS9I GGNCC 7 cut(s) 49, 1039, 1162, 1441, 1442, 1610, 1805
AsuHPI GGTGA 6 cut(s) 464, 562, 807, 1339, 1381, 1408
AsuII TTCGAA 1 cut(s) 1989
AvaII GGWCC 4 cut(s) 49, 1039, 1610, 1805
AxyI CCTNAGG 1 cut(s) 1773
BaeGI GKGCMC 2 cut(s) 185, 1445
BaeI ACNNNNGTAYC 2 cut(s) 662, 695
BanI GGYRCC 2 cut(s) 1212, 1489
BanII GRGCYC 1 cut(s) 1445
BbsI GAAGAC 3 cut(s) 21, 1935, 1956
Bbv12I GWGCWC 1 cut(s) 651
BbvI GCAGC 6 cut(s) 479, 994, 1093, 1115, 1163, 1300
BccI CCATC 4 cut(s) 215, 554, 1724, 2206
BceAI ACGGC 3 cut(s) 913, 1310, 1338
BciT130I CCWGG 2 cut(s) 858, 1638
BclI TGATCA 1 cut(s) 61
BcoDI GTCTC 4 cut(s) 168, 279, 873, 2060
BcuI ACTAGT 1 cut(s) 1648
BfaI CTAG 4 cut(s) 872, 1649, 1668, 2235
BfmI CTRYAG 2 cut(s) 316, 1110
BfoI RGCGCY 2 cut(s) 1493, 2142
BfrI CTTAAG 1 cut(s) 1466
BfuAI ACCTGC 1 cut(s) 1716
BisI GCNGC 7 cut(s) 6, 468, 1008, 1104, 1107, 1177, 1314
BlsI GCNGC 7 cut(s) 7, 469, 1009, 1105, 1108, 1178, 1315
BmcAI AGTACT 2 cut(s) 735, 1647
Bme1390I CCNGG 2 cut(s) 858, 1638
Bme18I GGWCC 4 cut(s) 49, 1039, 1610, 1805
BmgT120I GGNCC 7 cut(s) 49, 1039, 1162, 1441, 1442, 1610, 1805
BmiI GGNNCC 3 cut(s) 1214, 1443, 1491
BmrFI CCNGG 2 cut(s) 858, 1638
BmrI ACTGGG 1 cut(s) 929
BmsI GCATC 4 cut(s) 120, 625, 777, 2182
BmuI ACTGGG 1 cut(s) 929
BoxI GACNNNNGTC 1 cut(s) 333
BpiI GAAGAC 3 cut(s) 21, 1935, 1956
Bpu14I TTCGAA 1 cut(s) 1989
BpuEI CTTGAG 2 cut(s) 1943, 2319
Bsa29I ATCGAT 1 cut(s) 832
BsaHI GRCGYC 1 cut(s) 1490
BsaI GGTCTC 1 cut(s) 279
BsaJI CCNNGG 3 cut(s) 157, 857, 2061
BsaWI WCCGGW 1 cut(s) 2130
BsaXI ACNNNNNCTCC 2 cut(s) 2078, 2108
Bsc4I CCNNNNNNNGG 2 cut(s) 163, 1619
Bse1I ACTGG 5 cut(s) 672, 818, 935, 1437, 1629
Bse21I CCTNAGG 1 cut(s) 1773
Bse3DI GCAATG 1 cut(s) 1092
BseBI CCWGG 2 cut(s) 858, 1638
BseCI ATCGAT 1 cut(s) 832
BseDI CCNNGG 3 cut(s) 157, 857, 2061
BseGI GGATG 6 cut(s) 247, 565, 612, 1716, 2057, 2095
BseLI CCNNNNNNNGG 2 cut(s) 163, 1619
BseMI GCAATG 1 cut(s) 1092
BseMII CTCAG 2 cut(s) 1650, 1764
BseNI ACTGG 5 cut(s) 672, 818, 935, 1437, 1629
BseRI GAGGAG 3 cut(s) 434, 859, 1400
BseSI GKGCMC 2 cut(s) 185, 1445
BseX3I CGGCCG 1 cut(s) 1323
BseXI GCAGC 6 cut(s) 479, 994, 1093, 1115, 1163, 1300
BseYI CCCAGC 1 cut(s) 1316
Bsh1236I CGCG 1 cut(s) 1389
Bsh1285I CGRYCG 1 cut(s) 1326
BshFI GGCC 6 cut(s) 83, 578, 1081, 1163, 1325, 1443
BshNI GGYRCC 2 cut(s) 1212, 1489
BshVI ATCGAT 1 cut(s) 832
BsiEI CGRYCG 1 cut(s) 1326
BsiHKAI GWGCWC 1 cut(s) 651
BsiSI CCGG 4 cut(s) 575, 1918, 2084, 2131
BslFI GGGAC 3 cut(s) 1333, 1754, 1912
BslI CCNNNNNNNGG 2 cut(s) 163, 1619
BsmAI GTCTC 4 cut(s) 168, 279, 873, 2060
BsmFI GGGAC 3 cut(s) 1333, 1754, 1912
BsmI GAATGC 1 cut(s) 2107
BsnI GGCC 6 cut(s) 83, 578, 1081, 1163, 1325, 1443
Bso31I GGTCTC 1 cut(s) 279
Bsp119I TTCGAA 1 cut(s) 1989
Bsp120I GGGCCC 1 cut(s) 1441
Bsp1286I GDGCHC 3 cut(s) 185, 651, 1445
Bsp1407I TGTACA 1 cut(s) 1763
Bsp143I GATC 4 cut(s) 61, 534, 1257, 1800
BspACI CCGC 5 cut(s) 342, 1216, 1783, 1798, 2260
BspANI GGCC 6 cut(s) 83, 578, 1081, 1163, 1325, 1443
BspCNI CTCAG 2 cut(s) 1651, 1765
BspDI ATCGAT 1 cut(s) 832
BspFNI CGCG 1 cut(s) 1389
BspHI TCATGA 1 cut(s) 1017
BspLI GGNNCC 3 cut(s) 1214, 1443, 1491
BspMI ACCTGC 1 cut(s) 1716
BspPI GGATC 2 cut(s) 1252, 1808
BspQI GCTCTTC 1 cut(s) 1773
BspT104I TTCGAA 1 cut(s) 1989
BspT107I GGYRCC 2 cut(s) 1212, 1489
BspTI CTTAAG 1 cut(s) 1466
BspTNI GGTCTC 1 cut(s) 279
BsrBI CCGCTC 1 cut(s) 1783
BsrDI GCAATG 1 cut(s) 1092
BsrGI TGTACA 1 cut(s) 1763
BsrI ACTGG 5 cut(s) 672, 818, 935, 1437, 1629
BssECI CCNNGG 3 cut(s) 157, 857, 2061
BssMI GATC 4 cut(s) 61, 534, 1257, 1800
BssNAI GTATAC 1 cut(s) 2027
BssNI GRCGYC 1 cut(s) 1490
Bst1107I GTATAC 1 cut(s) 2027
Bst2UI CCWGG 2 cut(s) 858, 1638
Bst6I CTCTTC 2 cut(s) 1418, 1773
BstACI GRCGYC 1 cut(s) 1490
BstAFI CTTAAG 1 cut(s) 1466
BstAPI GCANNNNNTGC 2 cut(s) 514, 2111
BstAUI TGTACA 1 cut(s) 1763
BstBI TTCGAA 1 cut(s) 1989
BstC8I GCNNGC 4 cut(s) 1161, 1665, 1713, 1983
BstDEI CTNAG 4 cut(s) 887, 1659, 1773, 2291
BstDSI CCRYGG 1 cut(s) 2061
BstEII GGTNACC 1 cut(s) 1345
BstF5I GGATG 6 cut(s) 247, 565, 612, 1716, 2057, 2095
BstFNI CGCG 1 cut(s) 1389
BstH2I RGCGCY 2 cut(s) 1493, 2142
BstHHI GCGC 3 cut(s) 1389, 1492, 2141
BstKTI GATC 4 cut(s) 64, 537, 1260, 1803
BstMAI GTCTC 4 cut(s) 168, 279, 873, 2060
BstMBI GATC 4 cut(s) 61, 534, 1257, 1800
BstMCI CGRYCG 1 cut(s) 1326
BstMWI GCNNNNNNNGC 5 cut(s) 514, 1103, 1115, 1322, 2111
BstNI CCWGG 2 cut(s) 858, 1638
BstNSI RCATGY 2 cut(s) 380, 1825
BstPAI GACNNNNGTC 1 cut(s) 333
BstPI GGTNACC 1 cut(s) 1345
BstSCI CCNGG 2 cut(s) 856, 1636
BstSFI CTRYAG 2 cut(s) 316, 1110
BstSLI GKGCMC 2 cut(s) 185, 1445
BstUI CGCG 1 cut(s) 1389
BstV1I GCAGC 6 cut(s) 479, 994, 1093, 1115, 1163, 1300
BstV2I GAAGAC 3 cut(s) 21, 1935, 1956
BstXI CCANNNNNNTGG 2 cut(s) 76, 1036
BstZ17I GTATAC 1 cut(s) 2027
BstZI CGGCCG 1 cut(s) 1323
Bsu15I ATCGAT 1 cut(s) 832
Bsu36I CCTNAGG 1 cut(s) 1773
BsuRI GGCC 6 cut(s) 83, 578, 1081, 1163, 1325, 1443
BsuTUI ATCGAT 1 cut(s) 832
BtgI CCRYGG 1 cut(s) 2061
BtsCI GGATG 6 cut(s) 247, 565, 612, 1716, 2057, 2095
BtsIMutI CAGTG 2 cut(s) 825, 2320
BveI ACCTGC 1 cut(s) 1716
Cac8I GCNNGC 4 cut(s) 1161, 1665, 1713, 1983
CaiI CAGNNNCTG 1 cut(s) 1772
CciI TCATGA 1 cut(s) 1017
CfoI GCGC 3 cut(s) 1389, 1492, 2141
Cfr13I GGNCC 7 cut(s) 49, 1039, 1162, 1441, 1442, 1610, 1805
ClaI ATCGAT 1 cut(s) 832
CseI GACGC 1 cut(s) 1929
CspCI CAANNNNNGTGG 2 cut(s) 13, 48
CviAII CATG 9 cut(s) 377, 497, 547, 685, 1018, 1339, 1822, 1909, 2209
DdeI CTNAG 4 cut(s) 887, 1659, 1773, 2291
DinI GGCGCC 1 cut(s) 1491
DpnI GATC 4 cut(s) 63, 536, 1259, 1802
DpnII GATC 4 cut(s) 61, 534, 1257, 1800
DraI TTTAAA 1 cut(s) 804
EaeI YGGCCR 2 cut(s) 576, 1323
EagI CGGCCG 1 cut(s) 1323
Eam1104I CTCTTC 2 cut(s) 1418, 1773
EarI CTCTTC 2 cut(s) 1418, 1773
EciI GGCGGA 1 cut(s) 357
EclXI CGGCCG 1 cut(s) 1323
Eco24I GRGCYC 1 cut(s) 1445
Eco31I GGTCTC 1 cut(s) 279
Eco47I GGWCC 4 cut(s) 49, 1039, 1610, 1805
Eco52I CGGCCG 1 cut(s) 1323
Eco57I CTGAAG 1 cut(s) 317
Eco81I CCTNAGG 1 cut(s) 1773
Eco91I GGTNACC 1 cut(s) 1345
EcoO109I RGGNCCY 3 cut(s) 1162, 1441, 1442
EcoO65I GGTNACC 1 cut(s) 1345
EcoRI GAATTC 1 cut(s) 500
EcoRII CCWGG 2 cut(s) 856, 1636
EcoT22I ATGCAT 1 cut(s) 1575
EcoT38I GRGCYC 1 cut(s) 1445
EgeI GGCGCC 1 cut(s) 1491
EheI GGCGCC 1 cut(s) 1491
FaeI CATG 9 cut(s) 380, 500, 550, 688, 1021, 1342, 1825, 1912, 2212
FalI AAGNNNNNCTT 2 cut(s) 290, 322
FaqI GGGAC 3 cut(s) 1333, 1754, 1912
FatI CATG 9 cut(s) 376, 496, 546, 684, 1017, 1338, 1821, 1908, 2208
FbaI TGATCA 1 cut(s) 61
FblI GTMKAC 3 cut(s) 373, 853, 2026
Fnu4HI GCNGC 7 cut(s) 6, 468, 1008, 1104, 1107, 1177, 1314
FokI GGATG 6 cut(s) 254, 572, 619, 1703, 2044, 2102
FriOI GRGCYC 1 cut(s) 1445
Fsp4HI GCNGC 7 cut(s) 6, 468, 1008, 1104, 1107, 1177, 1314
FspBI CTAG 4 cut(s) 872, 1649, 1668, 2235
GlaI GCGC 3 cut(s) 1388, 1491, 2140
GluI GCNGC 7 cut(s) 6, 468, 1008, 1104, 1107, 1177, 1314
GsaI CCCAGC 1 cut(s) 1320
HaeII RGCGCY 2 cut(s) 1493, 2142
HaeIII GGCC 6 cut(s) 83, 578, 1081, 1163, 1325, 1443
HapII CCGG 4 cut(s) 575, 1918, 2084, 2131
HgaI GACGC 1 cut(s) 1929
HhaI GCGC 3 cut(s) 1389, 1492, 2141
Hin1I GRCGYC 1 cut(s) 1490
Hin1II CATG 9 cut(s) 380, 500, 550, 688, 1021, 1342, 1825, 1912, 2212
Hin6I GCGC 3 cut(s) 1387, 1490, 2139
HinP1I GCGC 3 cut(s) 1387, 1490, 2139
HincII GTYRAC 2 cut(s) 374, 854
HindII GTYRAC 2 cut(s) 374, 854
HindIII AAGCTT 1 cut(s) 1983
HinfI GANTC 8 cut(s) 474, 571, 866, 1188, 1249, 1925, 1991, 2243
HpaII CCGG 4 cut(s) 575, 1918, 2084, 2131
HphI GGTGA 6 cut(s) 464, 562, 807, 1339, 1381, 1408
Hpy166II GTNNAC 6 cut(s) 374, 854, 1128, 1634, 2027, 2206
Hpy188I TCNGA 4 cut(s) 297, 1660, 1805, 1948
Hpy188III TCNNGA 9 cut(s) 218, 478, 1018, 1064, 1235, 1522, 1995, 2336, 2347
Hpy8I GTNNAC 6 cut(s) 374, 854, 1128, 1634, 2027, 2206
HpyAV CCTTC 3 cut(s) 82, 992, 1472
HpyCH4IV ACGT 1 cut(s) 2019
HpyF10VI GCNNNNNNNGC 5 cut(s) 514, 1103, 1115, 1322, 2111
HpyF3I CTNAG 4 cut(s) 887, 1659, 1773, 2291
HpySE526I ACGT 1 cut(s) 2019
Hsp92I GRCGYC 1 cut(s) 1490
Hsp92II CATG 9 cut(s) 380, 500, 550, 688, 1021, 1342, 1825, 1912, 2212
HspAI GCGC 3 cut(s) 1387, 1490, 2139
KasI GGCGCC 1 cut(s) 1489
Ksp22I TGATCA 1 cut(s) 61
Kzo9I GATC 4 cut(s) 61, 534, 1257, 1800
LguI GCTCTTC 1 cut(s) 1773
LmnI GCTCC 1 cut(s) 251
Lsp1109I GCAGC 6 cut(s) 479, 994, 1093, 1115, 1163, 1300
LweI GCATC 4 cut(s) 120, 625, 777, 2182
MaeI CTAG 4 cut(s) 872, 1649, 1668, 2235
MaeII ACGT 1 cut(s) 2019
MaeIII GTNAC 5 cut(s) 409, 424, 1273, 1345, 2124
MalI GATC 4 cut(s) 63, 536, 1259, 1802
MbiI CCGCTC 1 cut(s) 1783
MboI GATC 4 cut(s) 61, 534, 1257, 1800
MboII GAAGA 9 cut(s) 26, 763, 1405, 1678, 1790, 1935, 1956, 2308, 2317
MfeI CAATTG 1 cut(s) 1098
MhlI GDGCHC 3 cut(s) 185, 651, 1445
Mly113I GGCGCC 1 cut(s) 1490
MlyI GAGTC 4 cut(s) 565, 875, 1197, 1934
MmeI TCCRAC 4 cut(s) 229, 468, 1053, 2335
Mph1103I ATGCAT 1 cut(s) 1575
MseI TTAA 8 cut(s) 752, 780, 803, 840, 1155, 1242, 1287, 1467
MslI CAYNNNNRTG 3 cut(s) 74, 1271, 1568
MspA1I CMGCKG 3 cut(s) 596, 1106, 1280
MspCI CTTAAG 1 cut(s) 1466
MspI CCGG 4 cut(s) 575, 1918, 2084, 2131
MspR9I CCNGG 2 cut(s) 858, 1638
MunI CAATTG 1 cut(s) 1098
Mva1269I GAATGC 1 cut(s) 2107
MvaI CCWGG 2 cut(s) 858, 1638
MvnI CGCG 1 cut(s) 1389
MwoI GCNNNNNNNGC 5 cut(s) 514, 1103, 1115, 1322, 2111
NarI GGCGCC 1 cut(s) 1490
NdeII GATC 4 cut(s) 61, 534, 1257, 1800
NlaIII CATG 9 cut(s) 380, 500, 550, 688, 1021, 1342, 1825, 1912, 2212
NlaIV GGNNCC 3 cut(s) 1214, 1443, 1491
NmeAIII GCCGAG 1 cut(s) 2173
NmuCI GTSAC 3 cut(s) 1273, 1345, 2124
NsiI ATGCAT 1 cut(s) 1575
NspI RCATGY 2 cut(s) 380, 1825
NspV TTCGAA 1 cut(s) 1989
PagI TCATGA 1 cut(s) 1017
PciI ACATGT 1 cut(s) 1821
PciSI GCTCTTC 1 cut(s) 1773
PctI GAATGC 1 cut(s) 2107
PfeI GAWTC 4 cut(s) 474, 1249, 1991, 2243
PflFI GACNNNGTC 2 cut(s) 1608, 2122
PkrI GCNGC 7 cut(s) 7, 469, 1009, 1105, 1108, 1178, 1315
PleI GAGTC 4 cut(s) 565, 874, 1196, 1933
PluTI GGCGCC 1 cut(s) 1493
PpsI GAGTC 4 cut(s) 565, 874, 1196, 1933
PscI ACATGT 1 cut(s) 1821
PshAI GACNNNNGTC 1 cut(s) 333
PsiI TTATAA 1 cut(s) 1700
Psp1406I AACGTT 1 cut(s) 2019
Psp6I CCWGG 2 cut(s) 856, 1636
PspEI GGTNACC 1 cut(s) 1345
PspFI CCCAGC 1 cut(s) 1316
PspGI CCWGG 2 cut(s) 856, 1636
PspN4I GGNNCC 3 cut(s) 1214, 1443, 1491
PspOMI GGGCCC 1 cut(s) 1441
PspPI GGNCC 7 cut(s) 49, 1039, 1162, 1441, 1442, 1610, 1805
PstNI CAGNNNCTG 1 cut(s) 1772
PsyI GACNNNGTC 2 cut(s) 1608, 2122
PvuII CAGCTG 3 cut(s) 596, 1106, 1280
RseI CAYNNNNRTG 3 cut(s) 74, 1271, 1568
SalI GTCGAC 2 cut(s) 372, 852
SapI GCTCTTC 1 cut(s) 1773
SaqAI TTAA 8 cut(s) 752, 780, 803, 840, 1155, 1242, 1287, 1467
SatI GCNGC 7 cut(s) 6, 468, 1008, 1104, 1107, 1177, 1314
Sau3AI GATC 4 cut(s) 61, 534, 1257, 1800
Sau96I GGNCC 7 cut(s) 49, 1039, 1162, 1441, 1442, 1610, 1805
ScaI AGTACT 2 cut(s) 735, 1647
SchI GAGTC 4 cut(s) 565, 875, 1197, 1934
ScrFI CCNGG 2 cut(s) 858, 1638
SduI GDGCHC 3 cut(s) 185, 651, 1445
SfaNI GCATC 4 cut(s) 120, 625, 777, 2182
SfcI CTRYAG 2 cut(s) 316, 1110
SfoI GGCGCC 1 cut(s) 1491
SfuI TTCGAA 1 cut(s) 1989
SinI GGWCC 4 cut(s) 49, 1039, 1610, 1805
SmiMI CAYNNNNRTG 3 cut(s) 74, 1271, 1568
SmlI CTYRAG 3 cut(s) 1466, 1922, 2334
SmoI CTYRAG 3 cut(s) 1466, 1922, 2334
SpeI ACTAGT 1 cut(s) 1648
SsiI CCGC 5 cut(s) 342, 1216, 1783, 1798, 2260
SspDI GGCGCC 1 cut(s) 1489
SspMI CTAG 4 cut(s) 872, 1649, 1668, 2235
StyD4I CCNGG 2 cut(s) 856, 1636
TaiI ACGT 1 cut(s) 2022
TaqI TCGA 4 cut(s) 373, 832, 853, 1989
TatI WGTACW 4 cut(s) 733, 1459, 1645, 1763
TfiI GAWTC 4 cut(s) 474, 1249, 1991, 2243
Tru1I TTAA 8 cut(s) 752, 780, 803, 840, 1155, 1242, 1287, 1467
Tru9I TTAA 8 cut(s) 752, 780, 803, 840, 1155, 1242, 1287, 1467
TscAI CASTG 2 cut(s) 825, 2320
TseFI GTSAC 3 cut(s) 1273, 1345, 2124
TseI GCWGC 7 cut(s) 5, 467, 1007, 1103, 1106, 1176, 1313
Tsp45I GTSAC 3 cut(s) 1273, 1345, 2124
TspGWI ACGGA 2 cut(s) 1817, 2050
TspRI CASTG 2 cut(s) 825, 2320
Tth111I GACNNNGTC 2 cut(s) 1608, 2122
Vha464I CTTAAG 1 cut(s) 1466
VpaK11BI GGWCC 4 cut(s) 49, 1039, 1610, 1805
XapI RAATTY 2 cut(s) 500, 1024
XceI RCATGY 2 cut(s) 380, 1825
XcmI CCANNNNNNNNNTGG 1 cut(s) 1242
XmiI GTMKAC 3 cut(s) 373, 853, 2026
XspI CTAG 4 cut(s) 872, 1649, 1668, 2235
ZrmI AGTACT 2 cut(s) 735, 1647
Zsp2I ATGCAT 1 cut(s) 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.