Rorug05G0059700

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
5209930 .. 5216433
6504 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0059700.1

Sequence Viewer

Length: 2784 bp
ATGGATATGGTTCTTAGTGACTCTGATTGGGACAGTTACAGTGAGACTGGTAGCAATGAGGATCAAGAGGGAAACGAATATTTCTATGGTGGGCATGCCAGCAGCCTATTGTCTAGCCTCGAGGCTAGCATTGGGAAAATTGATGACTTTCTCTCATTCGAGAGGGGATTTATATATGGGGACATAGTAAGCTCCGTAAGAGATCCATCTGGACAGATGGGAAAAGTTGTTGGCATTAAGATGTCAGTTGATTTGGAGAGTGTGAATGGAAATATGATCAAAAATGTAAACCCGAAGAATCTGTCAAAGATCCGTCCCATTTCGGTGGGGGATTATGTTGTTTGTGGGCCTTGGCTTGGAAGGGTGGATAGAGTAGTTGACTGTGTAGCTGTTGTCTTTGACGATGGCACAGAGTGTGTGGTGACTGCTGTGGATCCAGAGAAGCTCGTACCCGTCTCCCCAAACATACTTGAAGACCCACAGTACCCATATTATCCAGGACAGAGAGTAAAGGTTAGGCTCTCAACTGTTTCCAAATCAAGTAGATGGTTTTGTGGTAACTGGAGGGAAAATCAAGATGAAGGAACTGTTTGTTCTTTGGAAGGAGGTTTAATGTATGTTGATTGGCTTGCCTCTGTTCTCGTAGGTTGTGGTTCGAATTTTCGTGCTCCTCCACATCTGCTGGATTCAAAGAAATTGACTTTGGTATCATGTTTCTCTCATGCCAATTGGCAGCTTGGTGACTGGTGTATGCTTGCAATTGCTGAGTGTAAAGGTTTTTCGGAGCAGGCTTTTCATAGAACTTCTACTTGTGAGCTCACTAACAAGCAAAACAATTCAGAAAGAGGATTTAAGAGAAGAAATCCCAAGTCAAAAATTGAGGAAATCTTTGTAATCTCAAAGACAAAGACCAAAGTTGATGTTCTGTGGCAAGATGGTAGCCAGTCTTTGGAAGTGGATTCACAGACATTAGTTCCGGTCAGTGTTGTAAATGATCATGAATTTTGGCCTGAACAGTTTGTCCTTGAAAAGGGAACTTATGATGATCCAAACTTGTTTAGCAGTCAAAGGTGGGGTGTTGTGCGTGGTGTGGATGCAAAGGAACGAACAGTAAAGGTGCAATGGAAAACTATAACTGCACCCGAAACAAATAATTTAGAGGAAGAGCAGATGGAGGAAGTTGTAAGTGCTTATGAACTTGTTGAGCACCCGGATTACTCCTACTGTTTTGGAGATTATGTGTTCAGGATGGTCCAGAATCAGTTTGATGAACAAGCTGATAAAAACTATCCGAACACAAGGTCTGACATGACTGAGGAGGTAGCTCTGGAAGAGAAGAACTTCAGTGGGGATCAAGCTGACTTCACAGATAAAAGTTACCTACCTTGCATTGGCAATGTTTTGGGCTTCATAGATGGTGCTGTAGAAGTGAGATGGGCAACTGGTATTACAAACAAGGTGGCCCCATGTGAAATTTTCCGGTTTGATAAACATGAAGGTTCAGCTGCAATCCCCGTAGAAGATGACACTGAGGAATTGAACAAAGAGATAATTCAACATGAAAAACAACCTAATAACGAAGAAGGAAAGGATTCCTTGAATTTAGATGATGCTGCTAAAAGTTGTAAACCGTACACAAGCGAGTCTAGTTCCTATTTCCTTCCTCAAGCTGCCATTGGATTTTTCTCGAGCATCGCTGTGAGTCTCTTTGGATCCCATAGTTACACATCACTTTCAGGTCCTTCCCCATCAGTCTGTACTTCTGAAGTTGGAAAGGAATCCGGGATCTCCCATGAGAAAGGAATAGTAGAAACTCGTGATGTCTGCACTGAGCCACATTCAACATCTGAGTCTGACATTATTGGCAATGAAAATTTGAATCATGAAGGCGAAGACATTGAGGGGAACAGATATCTTCCATGTTTGAAAGACAAAGAGAATGCAGATCAGTTCAGGCAATTTGACATGCTTGCTGATTGTGCAGATCACCATTTTCATAGTGCCAGCAAGGAGTTGGCATTATCTCAGGTAAAAAGAGGTTGGATGAAGAAGGTTCAGCAAGAGTGGAGCATCTTAGAGAAAGATCTTCCTGAACAAATCTATGTCCGTGCGTTTGAGGAAAGGATGGATCTACTGCGGGCAGCCATTGTTGGTACACCAGGAACTCCATATCATGATGGGCTTTTCTTCTTTGACATTTATCTTCCACCAGAGTATCCTCATGAGCCACCTATGGTACACTACATTTCTGGTGGGCTACGTGTGAACCCGAACTTGTATGAGTCTGGAAAGGTCTGTCTCAGTCTGCTTAACACGTGGACTGGTACGGGCAGTGAAGTTTGGAATCCTGGGAGCTCCACCATTCTTCAAGTTCTTCTCTCCCTTCAGGCCCTTGTGCTTAATGACAGGCCATATTTCAATGAAGCTGGATATGATCAGCAGGTGGGAAGAACTGAGGGAGAGAAAAACTCAGTGAGCTATAATGAAAATGCATTCCTTATGACTTGCAAGTCCATGCTGTTTTCTCTCCAAAAGCCGCCTAAGCATTTTGAGGGGCTTGTGATGGAACACTTCACTCAGCGCTCTGAAAATATTCTAATGGCTTGTAAGGCATATATGGAGGGGGTTCCAATAGGGTGTGCTGTTGATTTTCAGAAAACCGATGATAAAGAGGGAAGCTCTACTGGGTTCAAAATTATGCTTGCTAAGCTCTTTCAGAAACTAATGGAGGCATTTTCTGCTAAGGGAATCGACTGCAACCAGTTCATCGCGCCAGGGAAATGA

Protein Analysis

927

Amino Acids

103.85

Weight (kDa)

4.79

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tSH3-B_UBE2O PF23046 109 - 241 4.2e-40 UBE2O, tandem tSH3-B domain
SH3-B_UBE2O PF23043 332 - 405 1.2e-18 UBE2O, SH3-B domain
UQ_con PF00179 685 - 830 3.1e-23 Ubiquitin-conjugating enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2431
AasI GACNNNNNNGTC 1 cut(s) 2509
AbsI CCTCGAGG 1 cut(s) 119
Acc36I ACCTGC 1 cut(s) 2431
AccB7I CCANNNNNTGG 1 cut(s) 949
AccII CGCG 1 cut(s) 2771
AciI CCGC 2 cut(s) 2137, 2537
AcsI RAATTY 5 cut(s) 658, 1001, 1473, 1600, 1873
AcuI CTGAAG 3 cut(s) 1327, 1785, 2369
AcvI CACGTG 1 cut(s) 2316
AdeI CACNNNGTG 1 cut(s) 414
AfaI GTAC 7 cut(s) 450, 485, 1634, 1759, 2155, 2238, 2326
AfeI AGCGCT 1 cut(s) 2582
AfiI CCNNNNNNNGG 4 cut(s) 356, 949, 1030, 1391
AflIII ACRYGT 2 cut(s) 2260, 2313
AjnI CCWGG 4 cut(s) 496, 2158, 2347, 2773
AjuI GAANNNNNNNTTGG 2 cut(s) 686, 718
AloI GAACNNNNNNTCC 2 cut(s) 1005, 1037
Alw21I GWGCWC 4 cut(s) 670, 819, 1209, 2357
Alw26I GTCTC 4 cut(s) 38, 460, 1709, 2303
Ama87I CYCGRG 2 cut(s) 119, 1687
Aor51HI AGCGCT 1 cut(s) 2582
AoxI GGCC 5 cut(s) 347, 1007, 1461, 2388, 2408
ApeKI GCWGC 6 cut(s) 102, 733, 1505, 1613, 1670, 2141
ApoI RAATTY 5 cut(s) 658, 1001, 1473, 1600, 1873
ArsI GACNNNNNNTTYG 4 cut(s) 287, 319, 1286, 1318
Asp700I GAANNNNTTC 3 cut(s) 1340, 1591, 2592
AspLEI GCGC 2 cut(s) 2583, 2773
AspS9I GGNCC 5 cut(s) 347, 1252, 1462, 1739, 2389
AsuC2I CCSGG 2 cut(s) 1211, 1783
AsuHPI GGTGA 3 cut(s) 433, 752, 1979
AsuII TTCGAA 1 cut(s) 656
AsuNHI GCTAGC 1 cut(s) 125
AvaI CYCGRG 2 cut(s) 119, 1687
AvaII GGWCC 2 cut(s) 1252, 1739
BaeI ACNNNNGTAYC 4 cut(s) 690, 723, 2198, 2231
BamHI GGATCC 2 cut(s) 433, 1712
BanII GRGCYC 2 cut(s) 819, 2357
BauI CACGAG 1 cut(s) 1815
BbrPI CACGTG 1 cut(s) 2316
BbsI GAAGAC 2 cut(s) 480, 1899
Bbv12I GWGCWC 4 cut(s) 670, 819, 1209, 2357
BbvI GCAGC 6 cut(s) 114, 745, 1492, 1600, 1657, 2153
BciT130I CCWGG 4 cut(s) 498, 2160, 2349, 2775
BciVI GTATCC 1 cut(s) 2226
BclI TGATCA 3 cut(s) 276, 994, 2434
BcnI CCSGG 2 cut(s) 1211, 1783
BcoDI GTCTC 4 cut(s) 38, 460, 1709, 2303
BfaI CTAG 3 cut(s) 114, 126, 1647
BfmI CTRYAG 1 cut(s) 1422
BfoI RGCGCY 1 cut(s) 2584
BfuAI ACCTGC 1 cut(s) 2431
BfuI GTATCC 1 cut(s) 2226
BglII AGATCT 1 cut(s) 2083
BisI GCNGC 7 cut(s) 103, 734, 1506, 1614, 1671, 2142, 2537
BlpI GCTNAGC 1 cut(s) 2706
BlsI GCNGC 7 cut(s) 104, 735, 1507, 1615, 1672, 2143, 2538
Bme1390I CCNGG 6 cut(s) 498, 1211, 1783, 2160, 2349, 2775
Bme18I GGWCC 2 cut(s) 1252, 1739
BmeT110I CYCGRG 2 cut(s) 119, 1687
BmgT120I GGNCC 5 cut(s) 347, 1252, 1462, 1739, 2389
BmiI GGNNCC 4 cut(s) 435, 1464, 1714, 2628
BmrFI CCNGG 6 cut(s) 498, 1211, 1783, 2160, 2349, 2775
BmrI ACTGGG 1 cut(s) 2694
BmsI GCATC 4 cut(s) 1084, 1600, 1701, 2079
BmtI GCTAGC 1 cut(s) 129
BmuI ACTGGG 1 cut(s) 2694
BpiI GAAGAC 2 cut(s) 480, 1899
BplI GAGNNNNNCTC 4 cut(s) 2453, 2485, 2663, 2695
BpmI CTGGAG 1 cut(s) 583
Bpu10I CCTNAGC 2 cut(s) 2541, 2742
Bpu1102I GCTNAGC 1 cut(s) 2706
Bpu14I TTCGAA 1 cut(s) 656
BpuEI CTTGAG 1 cut(s) 1650
BpuMI CCSGG 2 cut(s) 1211, 1783
BsaAI YACGTR 2 cut(s) 2261, 2316
BsaJI CCNNGG 3 cut(s) 350, 2348, 2774
BsaWI WCCGGW 2 cut(s) 976, 1479
BsaXI ACNNNNNCTCC 2 cut(s) 1224, 1254
Bsc4I CCNNNNNNNGG 4 cut(s) 356, 949, 1030, 1391
Bse1I ACTGG 8 cut(s) 52, 566, 749, 943, 1447, 2326, 2689, 2761
Bse3DI GCAATG 4 cut(s) 61, 1127, 1402, 1873
BseBI CCWGG 4 cut(s) 498, 2160, 2349, 2775
BseDI CCNNGG 3 cut(s) 350, 2348, 2774
BseGI GGATG 4 cut(s) 1099, 1254, 2049, 2130
BseLI CCNNNNNNNGG 4 cut(s) 356, 949, 1030, 1391
BseMI GCAATG 4 cut(s) 61, 1127, 1402, 1873
BseNI ACTGG 8 cut(s) 52, 566, 749, 943, 1447, 2326, 2689, 2761
BseRI GAGGAG 2 cut(s) 660, 1331
BseXI GCAGC 6 cut(s) 114, 745, 1492, 1600, 1657, 2153
BsgI GTGCAG 3 cut(s) 1122, 1810, 2001
Bsh1236I CGCG 1 cut(s) 2771
BshFI GGCC 5 cut(s) 349, 1009, 1463, 2390, 2410
BsiHKAI GWGCWC 4 cut(s) 670, 819, 1209, 2357
BsiHKCI CYCGRG 2 cut(s) 119, 1687
BsiSI CCGG 4 cut(s) 977, 1211, 1480, 1782
BslFI GGGAC 3 cut(s) 44, 194, 300
BslI CCNNNNNNNGG 4 cut(s) 356, 949, 1030, 1391
BsmAI GTCTC 4 cut(s) 38, 460, 1709, 2303
BsmBI CGTCTC 1 cut(s) 460
BsmFI GGGAC 3 cut(s) 44, 194, 300
BsmI GAATGC 2 cut(s) 1945, 2492
BsnI GGCC 5 cut(s) 349, 1009, 1463, 2390, 2410
BsoBI CYCGRG 2 cut(s) 119, 1687
Bsp119I TTCGAA 1 cut(s) 656
Bsp1286I GDGCHC 4 cut(s) 670, 819, 1209, 2357
Bsp1720I GCTNAGC 1 cut(s) 2706
BspACI CCGC 2 cut(s) 2137, 2537
BspANI GGCC 5 cut(s) 349, 1009, 1463, 2390, 2410
BspFNI CGCG 1 cut(s) 2771
BspHI TCATGA 4 cut(s) 997, 1882, 2173, 2221
BspLI GGNNCC 4 cut(s) 435, 1464, 1714, 2628
BspMI ACCTGC 1 cut(s) 2431
BspOI GCTAGC 1 cut(s) 129
BspQI GCTCTTC 1 cut(s) 1158
BspT104I TTCGAA 1 cut(s) 656
BsrDI GCAATG 4 cut(s) 61, 1127, 1402, 1873
BsrI ACTGG 8 cut(s) 52, 566, 749, 943, 1447, 2326, 2689, 2761
BssECI CCNNGG 3 cut(s) 350, 2348, 2774
BssSI CACGAG 1 cut(s) 1815
BssT1I CCWWGG 1 cut(s) 350
Bst2BI CACGAG 1 cut(s) 1815
Bst2UI CCWGG 4 cut(s) 498, 2160, 2349, 2775
Bst6I CTCTTC 2 cut(s) 1158, 1326
BstAPI GCANNNNNTGC 1 cut(s) 2738
BstBAI YACGTR 2 cut(s) 2261, 2316
BstBI TTCGAA 1 cut(s) 656
BstENI CCTNNNNNAGG 1 cut(s) 1028
BstF5I GGATG 4 cut(s) 1099, 1254, 2049, 2130
BstFNI CGCG 1 cut(s) 2771
BstH2I RGCGCY 1 cut(s) 2584
BstHHI GCGC 2 cut(s) 2583, 2773
BstMAI GTCTC 4 cut(s) 38, 460, 1709, 2303
BstMWI GCNNNNNNNGC 5 cut(s) 1979, 2542, 2609, 2707, 2738
BstNI CCWGG 4 cut(s) 498, 2160, 2349, 2775
BstNSI RCATGY 2 cut(s) 98, 1969
BstSCI CCNGG 6 cut(s) 496, 1209, 1781, 2158, 2347, 2773
BstSFI CTRYAG 1 cut(s) 1422
BstUI CGCG 1 cut(s) 2771
BstV1I GCAGC 6 cut(s) 114, 745, 1492, 1600, 1657, 2153
BstV2I GAAGAC 2 cut(s) 480, 1899
BstX2I RGATCY 7 cut(s) 202, 309, 433, 1712, 1785, 2083, 2128
BstXI CCANNNNNNTGG 1 cut(s) 325
BstYI RGATCY 7 cut(s) 202, 309, 433, 1712, 1785, 2083, 2128
BsuI GTATCC 1 cut(s) 2226
BsuRI GGCC 5 cut(s) 349, 1009, 1463, 2390, 2410
BtgZI GCGATG 2 cut(s) 1678, 2752
BtsCI GGATG 4 cut(s) 1099, 1254, 2049, 2130
BtsI GCAGTG 1 cut(s) 2338
BtsIMutI CAGTG 7 cut(s) 46, 988, 1351, 1527, 1827, 2338, 2478
BveI ACCTGC 1 cut(s) 2431
CciI TCATGA 4 cut(s) 997, 1882, 2173, 2221
CfoI GCGC 2 cut(s) 2583, 2773
Cfr13I GGNCC 5 cut(s) 347, 1252, 1462, 1739, 2389
Csp6I GTAC 7 cut(s) 449, 484, 1633, 1758, 2154, 2237, 2325
CspCI CAANNNNNGTGG 2 cut(s) 1440, 1475
CviQI GTAC 7 cut(s) 449, 484, 1633, 1758, 2154, 2237, 2325
DraIII CACNNNGTG 1 cut(s) 414
DrdI GACNNNNNNGTC 1 cut(s) 2509
DseDI GACNNNNNNGTC 1 cut(s) 2509
Eam1104I CTCTTC 2 cut(s) 1158, 1326
EarI CTCTTC 2 cut(s) 1158, 1326
Ecl136II GAGCTC 2 cut(s) 817, 2355
Eco130I CCWWGG 1 cut(s) 350
Eco24I GRGCYC 2 cut(s) 819, 2357
Eco32I GATATC 1 cut(s) 1913
Eco47I GGWCC 2 cut(s) 1252, 1739
Eco47III AGCGCT 1 cut(s) 2582
Eco53kI GAGCTC 2 cut(s) 817, 2355
Eco57I CTGAAG 3 cut(s) 1327, 1785, 2369
Eco72I CACGTG 1 cut(s) 2316
Eco88I CYCGRG 2 cut(s) 119, 1687
EcoICRI GAGCTC 2 cut(s) 817, 2355
EcoNI CCTNNNNNAGG 1 cut(s) 1028
EcoO109I RGGNCCY 2 cut(s) 1739, 2389
EcoRII CCWGG 4 cut(s) 496, 2158, 2347, 2773
EcoRV GATATC 1 cut(s) 1913
EcoT14I CCWWGG 1 cut(s) 350
EcoT22I ATGCAT 1 cut(s) 2494
EcoT38I GRGCYC 2 cut(s) 819, 2357
ErhI CCWWGG 1 cut(s) 350
Esp3I CGTCTC 1 cut(s) 460
FalI AAGNNNNNCTT 2 cut(s) 1580, 1612
FaqI GGGAC 3 cut(s) 44, 194, 300
FauI CCCGC 1 cut(s) 2130
FbaI TGATCA 3 cut(s) 276, 994, 2434
Fnu4HI GCNGC 7 cut(s) 103, 734, 1506, 1614, 1671, 2142, 2537
FokI GGATG 4 cut(s) 1106, 1261, 2056, 2137
FriOI GRGCYC 2 cut(s) 819, 2357
Fsp4HI GCNGC 7 cut(s) 103, 734, 1506, 1614, 1671, 2142, 2537
FspBI CTAG 3 cut(s) 114, 126, 1647
GlaI GCGC 2 cut(s) 2582, 2772
GluI GCNGC 7 cut(s) 103, 734, 1506, 1614, 1671, 2142, 2537
GsuI CTGGAG 1 cut(s) 583
HaeII RGCGCY 1 cut(s) 2584
HaeIII GGCC 5 cut(s) 349, 1009, 1463, 2390, 2410
HapII CCGG 4 cut(s) 977, 1211, 1480, 1782
HhaI GCGC 2 cut(s) 2583, 2773
Hin6I GCGC 2 cut(s) 2581, 2771
HinP1I GCGC 2 cut(s) 2581, 2771
HincII GTYRAC 1 cut(s) 379
HindII GTYRAC 1 cut(s) 379
HpaII CCGG 4 cut(s) 977, 1211, 1480, 1782
HphI GGTGA 3 cut(s) 433, 752, 1979
Hpy166II GTNNAC 8 cut(s) 289, 379, 1628, 1635, 2156, 2239, 2266, 2319
Hpy8I GTNNAC 8 cut(s) 289, 379, 1628, 1635, 2156, 2239, 2266, 2319
HpyCH4IV ACGT 2 cut(s) 2260, 2315
HpyF10VI GCNNNNNNNGC 5 cut(s) 1979, 2542, 2609, 2707, 2738
HpySE526I ACGT 2 cut(s) 2260, 2315
HspAI GCGC 2 cut(s) 2581, 2771
Ksp22I TGATCA 3 cut(s) 276, 994, 2434
LguI GCTCTTC 1 cut(s) 1158
LmnI GCTCC 6 cut(s) 197, 673, 784, 2067, 2352, 2360
Lsp1109I GCAGC 6 cut(s) 114, 745, 1492, 1600, 1657, 2153
LweI GCATC 4 cut(s) 1084, 1600, 1701, 2079
MaeI CTAG 3 cut(s) 114, 126, 1647
MaeII ACGT 2 cut(s) 2260, 2315
MaeIII GTNAC 7 cut(s) 17, 35, 421, 557, 740, 1376, 1721
MfeI CAATTG 2 cut(s) 727, 759
MflI RGATCY 7 cut(s) 202, 309, 433, 1712, 1785, 2083, 2128
MhlI GDGCHC 4 cut(s) 670, 819, 1209, 2357
MlyI GAGTC 5 cut(s) 14, 1652, 1711, 1859, 2291
MmeI TCCRAC 2 cut(s) 1750, 2021
Mph1103I ATGCAT 1 cut(s) 2494
MroXI GAANNNNTTC 3 cut(s) 1340, 1591, 2592
MseI TTAA 5 cut(s) 237, 611, 852, 2310, 2400
MslI CAYNNNNRTG 3 cut(s) 239, 323, 1697
MspA1I CMGCKG 1 cut(s) 1505
MspI CCGG 4 cut(s) 977, 1211, 1480, 1782
MspR9I CCNGG 6 cut(s) 498, 1211, 1783, 2160, 2349, 2775
MunI CAATTG 2 cut(s) 727, 759
Mva1269I GAATGC 2 cut(s) 1945, 2492
MvaI CCWGG 4 cut(s) 498, 2160, 2349, 2775
MvnI CGCG 1 cut(s) 2771
MwoI GCNNNNNNNGC 5 cut(s) 1979, 2542, 2609, 2707, 2738
NciI CCSGG 2 cut(s) 1211, 1783
NheI GCTAGC 1 cut(s) 125
NlaIV GGNNCC 4 cut(s) 435, 1464, 1714, 2628
NmuCI GTSAC 3 cut(s) 17, 421, 740
NsiI ATGCAT 1 cut(s) 2494
NspI RCATGY 2 cut(s) 98, 1969
NspV TTCGAA 1 cut(s) 656
PaeI GCATGC 1 cut(s) 98
PaeR7I CTCGAG 2 cut(s) 119, 1687
PagI TCATGA 4 cut(s) 997, 1882, 2173, 2221
PaqCI CACCTGC 1 cut(s) 2431
PciSI GCTCTTC 1 cut(s) 1158
PctI GAATGC 2 cut(s) 1945, 2492
PdmI GAANNNNTTC 3 cut(s) 1340, 1591, 2592
PfeI GAWTC 9 cut(s) 298, 686, 959, 1258, 1592, 1778, 1879, 2344, 2748
PflMI CCANNNNNTGG 1 cut(s) 949
PfoI TCCNGGA 2 cut(s) 496, 1781
PkrI GCNGC 7 cut(s) 104, 735, 1507, 1615, 1672, 2143, 2538
PleI GAGTC 5 cut(s) 14, 1651, 1710, 1858, 2290
PmaCI CACGTG 1 cut(s) 2316
PmlI CACGTG 1 cut(s) 2316
PpsI GAGTC 5 cut(s) 14, 1651, 1710, 1858, 2290
Ppu21I YACGTR 2 cut(s) 2261, 2316
PpuMI RGGWCCY 1 cut(s) 1739
Psp124BI GAGCTC 2 cut(s) 819, 2357
Psp5II RGGWCCY 1 cut(s) 1739
Psp6I CCWGG 4 cut(s) 496, 2158, 2347, 2773
PspCI CACGTG 1 cut(s) 2316
PspGI CCWGG 4 cut(s) 496, 2158, 2347, 2773
PspN4I GGNNCC 4 cut(s) 435, 1464, 1714, 2628
PspPI GGNCC 5 cut(s) 347, 1252, 1462, 1739, 2389
PspPPI RGGWCCY 1 cut(s) 1739
PspXI VCTCGAGB 1 cut(s) 119
PsuI RGATCY 7 cut(s) 202, 309, 433, 1712, 1785, 2083, 2128
PvuII CAGCTG 1 cut(s) 1505
RsaI GTAC 7 cut(s) 450, 485, 1634, 1759, 2155, 2238, 2326
RsaNI GTAC 7 cut(s) 449, 484, 1633, 1758, 2154, 2237, 2325
RseI CAYNNNNRTG 3 cut(s) 239, 323, 1697
SacI GAGCTC 2 cut(s) 819, 2357
SapI GCTCTTC 1 cut(s) 1158
SaqAI TTAA 5 cut(s) 237, 611, 852, 2310, 2400
SatI GCNGC 7 cut(s) 103, 734, 1506, 1614, 1671, 2142, 2537
Sau96I GGNCC 5 cut(s) 347, 1252, 1462, 1739, 2389
SchI GAGTC 5 cut(s) 14, 1652, 1711, 1859, 2291
ScrFI CCNGG 6 cut(s) 498, 1211, 1783, 2160, 2349, 2775
SduI GDGCHC 4 cut(s) 670, 819, 1209, 2357
SfaNI GCATC 4 cut(s) 1084, 1600, 1701, 2079
SfcI CTRYAG 1 cut(s) 1422
Sfr274I CTCGAG 2 cut(s) 119, 1687
SfuI TTCGAA 1 cut(s) 656
SinI GGWCC 2 cut(s) 1252, 1739
SlaI CTCGAG 2 cut(s) 119, 1687
SmiMI CAYNNNNRTG 3 cut(s) 239, 323, 1697
SmlI CTYRAG 3 cut(s) 119, 1665, 1687
SmoI CTYRAG 3 cut(s) 119, 1665, 1687
SphI GCATGC 1 cut(s) 98
SsiI CCGC 2 cut(s) 2137, 2537
SspI AATATT 2 cut(s) 80, 2593
SspMI CTAG 3 cut(s) 114, 126, 1647
SstI GAGCTC 2 cut(s) 819, 2357
StyD4I CCNGG 6 cut(s) 496, 1209, 1781, 2158, 2347, 2773
StyI CCWWGG 1 cut(s) 350
TaiI ACGT 2 cut(s) 2263, 2318
TaqI TCGA 5 cut(s) 120, 159, 656, 1688, 2751
TatI WGTACW 1 cut(s) 1757
TauI GCSGC 1 cut(s) 2539
TfiI GAWTC 9 cut(s) 298, 686, 959, 1258, 1592, 1778, 1879, 2344, 2748
Tru1I TTAA 5 cut(s) 237, 611, 852, 2310, 2400
Tru9I TTAA 5 cut(s) 237, 611, 852, 2310, 2400
TscAI CASTG 7 cut(s) 46, 988, 1351, 1534, 1834, 2338, 2478
TseFI GTSAC 3 cut(s) 17, 421, 740
TseI GCWGC 6 cut(s) 102, 733, 1505, 1613, 1670, 2141
Tsp45I GTSAC 3 cut(s) 17, 421, 740
TspGWI ACGGA 3 cut(s) 184, 302, 2096
TspRI CASTG 7 cut(s) 46, 988, 1351, 1534, 1834, 2338, 2478
Van91I CCANNNNNTGG 1 cut(s) 949
VpaK11BI GGWCC 2 cut(s) 1252, 1739
XagI CCTNNNNNAGG 1 cut(s) 1028
XapI RAATTY 5 cut(s) 658, 1001, 1473, 1600, 1873
XceI RCATGY 2 cut(s) 98, 1969
XcmI CCANNNNNNNNNTGG 1 cut(s) 2011
XhoI CTCGAG 2 cut(s) 119, 1687
XmnI GAANNNNTTC 3 cut(s) 1340, 1591, 2592
XspI CTAG 3 cut(s) 114, 126, 1647
Zsp2I ATGCAT 1 cut(s) 2494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.