Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000477

Physical Location & Seq

Genomic Coordinates Forward (+)

15620898 .. 15627323

Gene Structure 6426 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G013300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGCCTCCAAGAGTTTTATGGTACCTTTTGTTGCTCATGAGGTACCATAAGTTTTACAGAGCTTGTGGTTTCTGTGGTGCAGGTGGAACTTTTGCTCTTTATTCATTGCTCTGTCGGCATGCAAAAGTAAAAACTATTCCCAATCAGCATCGGACTGATGAAGAGCTAACAACATATAGTCGTTCTACTTTTCATGAACAATCATATGCTGCAAAAACCAAGAAGTGGTTGGAGGGACATGCATCAAGGAAGAATGCACTTCTTCTTCTGGTCCTTGTTGGCACTTGTATGGTTATTGGAGATGGGATTCTTACACCAGCTATATCAGTTCTATCAGCTGCTGGGGGGATCAAAGTAAACAGCCCTAAGATGGATAATGATTATGTCATACTTGTAGCCGTTGTGATATTAGTGGGTTTGTTCAGCATGCAGCATTATGGGACAGATAAAGTTGGTTGGCTCTTTGCTCCCATTGTGCTGCTTTGGTTTCTCTTGATCGGAGGTATTGGCATATTCAACATCTGGAAATATGACAGTAGTGTTTTGAGAGCTTTTTCACCTGTGTATATATATCGGTATTTTAAAAGGAATGGGAGAGATGGTTGGACTTCCCTTGGAGGTATTATGCTTAGTATAACAGGGACAGAAGCACTCTTTGCCGACCTTGCCCATTTTCCAGTTTCAGCTGTACAGATTGCTTTTACCACAGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGTCAAGCTGCCTTTCTTGTAGTACATCATGATAACAATGAAACTGTGACTCAAGCATTTTATCGTTCTATTCCAGATAGGATATATTGGCCAGTCTTCGTTGTTGCGACTCTAGCTGCCATAGTTGCAAGTCAAGCAACTATATCTGCAACTTTTTCAATAATTAAGCAGGCTCTTGCACTTGGCTGTTTTCCTAGGGTCAAAGTTGTACATACATCAAAGAAGTTCCTTGGCCAAATATATATTCCAGATATTAATTGGATCCTTATGATTCTTTGCATTGCTGTGACTGCTGGATTCAAAAATCAAAGCCAAATTGGAAATGCTTATGGGACGGCGGTTGTAGTGGTCATGCTGGCAACCACTTTCCTTATGACTCTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTTGTTGTGATATTCACTGGTTTGTCACTGGTTGTGGAGTGCACTTACTTTTCTGCTGTACTCTTCAAGGTTGATCAAGGGGGATGGGTTCCTCTTGTGATTGCAGCTGCCTTTCTTCTCATCATGTATGTATGGCACTATGGTTCGTTGAAACGTTATGAGTTTGAAATGCACAGCAAGGTTTCAATGGCCTGGCTTCTTGGACTTGGCCCCAGTTTAGGACTGGTTCGGGTCCCTGGGGTAGGACTTGTGTATACCGAGCTTGCAAGCGGGGTGCCCCATATCTTTTCCCACTTCATTACCAACCTGCCTGCTATCCATTCTGTTGTTATCTTTGTTTGTGTGAAGTATCTTCCTGTATATACTGTCCCAGAAGAAGAAAGATTCCTTGTAAAGCGGATTGGCCCCAAGAATTTCCACATGTTCCGGTGTGTTGCTAGATATGGTTACAAAGACCTCCACAGAAAAGATGATGACTTTGAGAAAAAGCTGTTTGATAATCTTTTCATGTTTGTCCGATTGGAAGCCATGATGGAAGGGTGTTCAGACTCAGATGAGTACAGTGTATATGGCCAGCAAACCGAGAAGTCAAGGGAAATCCTATTAAACAATAATGGAAACACTTCTCCGTCGTTGGGGGACCTTACCATGTCAACAGTGGATGCCATTGTGCCTGTTAGATCTCCGATGAATAATGCAAGCAACACTGTCTCTTCTCAGATGAGCAACCAGACTGAGATGGATGAGTTGGAATTTATGAATAATTGTAGAGACGCCGGCGTGGTGCATATACTTGGTAATACGGTAGTAAGAGCAAGGAGGGATTCCAGGTTCTACAAGAAGATTGCTGTTGATTATATATATGCATTTCTTAGAAAAGTATGCAGGGAGCACAGTGTGATCTTCAATGTCCCTCATGAGAGTCTCTTGAATGTTGGACAAATTTTCTACGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0071804 GO:0071805 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

K_trans

Protein Analysis

703

Amino Acids

79.02

Weight (kDa)

9.01

Isoelectric Point (pI)

38.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
K_trans	PF02705	5 - 450	1.1e-136	K+ potassium transporter integral membrane domain
K_trans_C	PF22776	464 - 700	1.2e-25	K+ potassium transporter C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000477)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca	FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica	MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica	Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis	pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis	RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata	RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora	Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa	Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha	Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana	Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	71
Acc36I	ACCTGC	2 cut(s)	71, 1470
Acc65I	GGTACC	2 cut(s)	21, 42
AccB1I	GGYRCC	3 cut(s)	21, 42, 1429
AccB7I	CCANNNNNTGG	1 cut(s)	225
AccI	GTMKAC	1 cut(s)	1409
AciI	CCGC	3 cut(s)	1079, 1425, 1552
AclI	AACGTT	1 cut(s)	1309
AclWI	GGATC	3 cut(s)	356, 997, 1010
AcoI	YGGCCR	3 cut(s)	830, 973, 1726
AcsI	RAATTY	3 cut(s)	1567, 1907, 2097
AcyI	GRCGYC	1 cut(s)	1929
AdeI	CACNNNGTG	1 cut(s)	2053
AfaI	GTAC	7 cut(s)	23, 44, 690, 765, 951, 1215, 1715
AfiI	CCNNNNNNNGG	5 cut(s)	225, 370, 1373, 1397, 1790
AflIII	ACRYGT	2 cut(s)	1575, 2106
AgsI	TTSAA	9 cut(s)	517, 900, 1042, 1222, 1306, 1322, 1341, 2062, 2086
AjnI	CCWGG	3 cut(s)	1346, 1390, 1982
AjuI	GAANNNNNNNTTGG	2 cut(s)	969, 1001
AleI	CACNNNNGTG	1 cut(s)	710
AloI	GAACNNNNNNTCC	2 cut(s)	1970, 2002
Alw21I	GWGCWC	2 cut(s)	1199, 2049
Alw26I	GTCTC	3 cut(s)	1870, 1920, 2084
Alw44I	GTGCAC	1 cut(s)	1195
AlwI	GGATC	3 cut(s)	356, 997, 1010
AlwNI	CAGNNNCTG	1 cut(s)	341
AoxI	GGCC	6 cut(s)	830, 973, 1344, 1363, 1558, 1726
ApaLI	GTGCAC	1 cut(s)	1195
ApeKI	GCWGC	9 cut(s)	209, 338, 430, 478, 749, 857, 1143, 1259, 1262
ApoI	RAATTY	3 cut(s)	1567, 1907, 2097
AseI	ATTAAT	1 cut(s)	996
Asp700I	GAANNNNTTC	1 cut(s)	1777
Asp718I	GGTACC	2 cut(s)	21, 42
AspA2I	CCTAGG	1 cut(s)	935
AspLEI	GCGC	1 cut(s)	1143
AspS9I	GGNCC	5 cut(s)	271, 1364, 1387, 1559, 1795
AsuHPI	GGTGA	1 cut(s)	549
AvaII	GGWCC	3 cut(s)	271, 1387, 1795
AvrII	CCTAGG	1 cut(s)	935
BaeGI	GKGCMC	2 cut(s)	1199, 1434
BalI	TGGCCA	3 cut(s)	832, 975, 1728
BamHI	GGATCC	1 cut(s)	1002
BanI	GGYRCC	3 cut(s)	21, 42, 1429
BbsI	GAAGAC	1 cut(s)	829
Bbv12I	GWGCWC	2 cut(s)	1199, 2049
BbvI	GCAGC	9 cut(s)	196, 325, 442, 465, 736, 844, 1130, 1249, 1271
BccI	CCATC	6 cut(s)	296, 364, 593, 1233, 1681, 1888
BceAI	ACGGC	2 cut(s)	383, 1092
BciT130I	CCWGG	3 cut(s)	1348, 1392, 1984
BclI	TGATCA	1 cut(s)	1228
BcoDI	GTCTC	3 cut(s)	1870, 1920, 2084
BfaI	CTAG	3 cut(s)	854, 936, 1593
BfoI	RGCGCY	1 cut(s)	1144
BfuAI	ACCTGC	2 cut(s)	71, 1470
BglII	AGATCT	1 cut(s)	1835
BisI	GCNGC	9 cut(s)	210, 339, 431, 479, 750, 858, 1144, 1260, 1263
BlnI	CCTAGG	1 cut(s)	935
BlsI	GCNGC	9 cut(s)	211, 340, 432, 480, 751, 859, 1145, 1261, 1264
Bme1390I	CCNGG	3 cut(s)	1348, 1392, 1984
Bme18I	GGWCC	3 cut(s)	271, 1387, 1795
BmgT120I	GGNCC	5 cut(s)	271, 1364, 1387, 1559, 1795
BmrFI	CCNGG	3 cut(s)	1348, 1392, 1984
BmrI	ACTGGG	1 cut(s)	1362
BmsI	GCATC	3 cut(s)	157, 251, 1807
BmuI	ACTGGG	1 cut(s)	1362
BpiI	GAAGAC	1 cut(s)	829
BpuEI	CTTGAG	1 cut(s)	777
BsaAI	YACGTR	1 cut(s)	2107
BsaHI	GRCGYC	1 cut(s)	1929
BsaJI	CCNNGG	5 cut(s)	613, 935, 970, 1390, 1391
BsaWI	WCCGGW	1 cut(s)	1581
BsaXI	ACNNNNNCTCC	2 cut(s)	586, 616
Bsc4I	CCNNNNNNNGG	5 cut(s)	225, 370, 1373, 1397, 1790
Bse118I	RCCGGY	1 cut(s)	1931
Bse1I	ACTGG	6 cut(s)	677, 833, 1177, 1188, 1368, 1383
Bse3DI	GCAATG	2 cut(s)	104, 1020
BseBI	CCWGG	3 cut(s)	1348, 1392, 1984
BseDI	CCNNGG	5 cut(s)	613, 935, 970, 1390, 1391
BseGI	GGATG	3 cut(s)	1244, 1822, 1903
BseLI	CCNNNNNNNGG	5 cut(s)	225, 370, 1373, 1397, 1790
BseMI	GCAATG	2 cut(s)	104, 1020
BseMII	CTCAG	3 cut(s)	1719, 1881, 1886
BseNI	ACTGG	6 cut(s)	677, 833, 1177, 1188, 1368, 1383
BseSI	GKGCMC	2 cut(s)	1199, 1434
BseXI	GCAGC	9 cut(s)	196, 325, 442, 465, 736, 844, 1130, 1249, 1271
BseYI	CCCAGC	1 cut(s)	341
BsgI	GTGCAG	1 cut(s)	99
BshFI	GGCC	6 cut(s)	832, 975, 1346, 1365, 1560, 1728
BshNI	GGYRCC	3 cut(s)	21, 42, 1429
BsiHKAI	GWGCWC	2 cut(s)	1199, 2049
BsiSI	CCGG	2 cut(s)	1582, 1932
BslFI	GGGAC	8 cut(s)	249, 454, 655, 1087, 1373, 1508, 1808, 2051
BslI	CCNNNNNNNGG	5 cut(s)	225, 370, 1373, 1397, 1790
BsmAI	GTCTC	3 cut(s)	1870, 1920, 2084
BsmBI	CGTCTC	1 cut(s)	1920
BsmFI	GGGAC	8 cut(s)	249, 454, 655, 1087, 1373, 1508, 1808, 2051
BsmI	GAATGC	1 cut(s)	259
BsnI	GGCC	6 cut(s)	832, 975, 1346, 1365, 1560, 1728
Bsp1286I	GDGCHC	3 cut(s)	1199, 1434, 2049
Bsp1407I	TGTACA	2 cut(s)	688, 949
Bsp143I	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
BspACI	CCGC	3 cut(s)	1079, 1425, 1552
BspANI	GGCC	6 cut(s)	832, 975, 1346, 1365, 1560, 1728
BspCNI	CTCAG	3 cut(s)	1718, 1882, 1885
BspHI	TCATGA	5 cut(s)	36, 193, 769, 1125, 2071
BspMI	ACCTGC	2 cut(s)	71, 1470
BspPI	GGATC	3 cut(s)	356, 997, 1010
BspQI	GCTCTTC	1 cut(s)	156
BspT107I	GGYRCC	3 cut(s)	21, 42, 1429
BsrDI	GCAATG	2 cut(s)	104, 1020
BsrFI	RCCGGY	1 cut(s)	1931
BsrGI	TGTACA	2 cut(s)	688, 949
BsrI	ACTGG	6 cut(s)	677, 833, 1177, 1188, 1368, 1383
BssAI	RCCGGY	1 cut(s)	1931
BssECI	CCNNGG	5 cut(s)	613, 935, 970, 1390, 1391
BssMI	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
BssNAI	GTATAC	1 cut(s)	1410
BssNI	GRCGYC	1 cut(s)	1929
BssT1I	CCWWGG	3 cut(s)	613, 935, 970
Bst1107I	GTATAC	1 cut(s)	1410
Bst2UI	CCWGG	3 cut(s)	1348, 1392, 1984
Bst4CI	ACNGT	9 cut(s)	536, 709, 787, 1522, 1718, 1813, 1864, 1960, 2051
Bst6I	CTCTTC	3 cut(s)	156, 1223, 1873
BstACI	GRCGYC	1 cut(s)	1929
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstAUI	TGTACA	2 cut(s)	688, 949
BstBAI	YACGTR	1 cut(s)	2107
BstDEI	CTNAG	6 cut(s)	366, 629, 1705, 1872, 1890, 2027
BstENI	CCTNNNNNAGG	1 cut(s)	1395
BstF5I	GGATG	3 cut(s)	1244, 1822, 1903
BstH2I	RGCGCY	1 cut(s)	1144
BstHHI	GCGC	1 cut(s)	1143
BstKTI	GATC	6 cut(s)	351, 498, 1005, 1231, 1838, 2058
BstMAI	GTCTC	3 cut(s)	1870, 1920, 2084
BstMBI	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
BstMWI	GCNNNNNNNGC	7 cut(s)	115, 656, 665, 854, 866, 875, 1031
BstNI	CCWGG	3 cut(s)	1348, 1392, 1984
BstNSI	RCATGY	4 cut(s)	122, 242, 430, 1579
BstSCI	CCNGG	3 cut(s)	1346, 1390, 1982
BstSLI	GKGCMC	2 cut(s)	1199, 1434
BstV1I	GCAGC	9 cut(s)	196, 325, 442, 465, 736, 844, 1130, 1249, 1271
BstV2I	GAAGAC	1 cut(s)	829
BstX2I	RGATCY	2 cut(s)	1002, 1835
BstYI	RGATCY	2 cut(s)	1002, 1835
BstZ17I	GTATAC	1 cut(s)	1410
BsuRI	GGCC	6 cut(s)	832, 975, 1346, 1365, 1560, 1728
BtsCI	GGATG	3 cut(s)	1244, 1822, 1903
BtsIMutI	CAGTG	6 cut(s)	1170, 1181, 1723, 1818, 1860, 2056
BveI	ACCTGC	2 cut(s)	71, 1470
CaiI	CAGNNNCTG	1 cut(s)	341
CciI	TCATGA	5 cut(s)	36, 193, 769, 1125, 2071
CfoI	GCGC	1 cut(s)	1143
Cfr10I	RCCGGY	1 cut(s)	1931
Cfr13I	GGNCC	5 cut(s)	271, 1364, 1387, 1559, 1795
CseI	GACGC	1 cut(s)	1937
Csp6I	GTAC	7 cut(s)	22, 43, 689, 764, 950, 1214, 1714
CviQI	GTAC	7 cut(s)	22, 43, 689, 764, 950, 1214, 1714
DdeI	CTNAG	6 cut(s)	366, 629, 1705, 1872, 1890, 2027
DpnI	GATC	6 cut(s)	350, 497, 1004, 1230, 1837, 2057
DpnII	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
DraI	TTTAAA	1 cut(s)	583
DraIII	CACNNNGTG	1 cut(s)	2053
EaeI	YGGCCR	3 cut(s)	830, 973, 1726
Eam1104I	CTCTTC	3 cut(s)	156, 1223, 1873
EarI	CTCTTC	3 cut(s)	156, 1223, 1873
Eco130I	CCWWGG	3 cut(s)	613, 935, 970
Eco47I	GGWCC	3 cut(s)	271, 1387, 1795
EcoNI	CCTNNNNNAGG	1 cut(s)	1395
EcoO109I	RGGNCCY	2 cut(s)	1387, 1795
EcoRII	CCWGG	3 cut(s)	1346, 1390, 1982
EcoT14I	CCWWGG	3 cut(s)	613, 935, 970
EcoT22I	ATGCAT	2 cut(s)	244, 2023
ErhI	CCWWGG	3 cut(s)	613, 935, 970
Esp3I	CGTCTC	1 cut(s)	1920
FaqI	GGGAC	8 cut(s)	249, 454, 655, 1087, 1373, 1508, 1808, 2051
FauI	CCCGC	1 cut(s)	1418
FauNDI	CATATG	1 cut(s)	205
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	1 cut(s)	1409
Fnu4HI	GCNGC	9 cut(s)	210, 339, 431, 479, 750, 858, 1144, 1260, 1263
FokI	GGATG	3 cut(s)	1251, 1829, 1910
Fsp4HI	GCNGC	9 cut(s)	210, 339, 431, 479, 750, 858, 1144, 1260, 1263
FspBI	CTAG	3 cut(s)	854, 936, 1593
GlaI	GCGC	1 cut(s)	1142
GluI	GCNGC	9 cut(s)	210, 339, 431, 479, 750, 858, 1144, 1260, 1263
GsaI	CCCAGC	1 cut(s)	345
HaeII	RGCGCY	1 cut(s)	1144
HaeIII	GGCC	6 cut(s)	832, 975, 1346, 1365, 1560, 1728
HapII	CCGG	2 cut(s)	1582, 1932
HgaI	GACGC	1 cut(s)	1937
HhaI	GCGC	1 cut(s)	1143
Hin1I	GRCGYC	1 cut(s)	1929
Hin6I	GCGC	1 cut(s)	1141
HinP1I	GCGC	1 cut(s)	1141
HincII	GTYRAC	1 cut(s)	1809
HindII	GTYRAC	1 cut(s)	1809
HpaII	CCGG	2 cut(s)	1582, 1932
HphI	GGTGA	1 cut(s)	549
Hpy166II	GTNNAC	4 cut(s)	358, 1197, 1410, 1809
Hpy188I	TCNGA	7 cut(s)	153, 500, 1673, 1702, 1708, 1842, 1875
Hpy8I	GTNNAC	4 cut(s)	358, 1197, 1410, 1809
Hpy99I	CGWCG	1 cut(s)	1789
HpyAV	CCTTC	2 cut(s)	734, 1685
HpyCH4III	ACNGT	9 cut(s)	536, 709, 787, 1522, 1718, 1813, 1864, 1960, 2051
HpyCH4IV	ACGT	2 cut(s)	1309, 2106
HpyF10VI	GCNNNNNNNGC	7 cut(s)	115, 656, 665, 854, 866, 875, 1031
HpyF3I	CTNAG	6 cut(s)	366, 629, 1705, 1872, 1890, 2027
HpySE526I	ACGT	2 cut(s)	1309, 2106
Hsp92I	GRCGYC	1 cut(s)	1929
HspAI	GCGC	1 cut(s)	1141
KflI	GGGWCCC	1 cut(s)	1387
KpnI	GGTACC	2 cut(s)	25, 46
KroI	GCCGGC	1 cut(s)	1931
KroNI	GCCGGC	1 cut(s)	1933
Ksp22I	TGATCA	1 cut(s)	1228
Kzo9I	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
LguI	GCTCTTC	1 cut(s)	156
LmnI	GCTCC	2 cut(s)	472, 2044
Lsp1109I	GCAGC	9 cut(s)	196, 325, 442, 465, 736, 844, 1130, 1249, 1271
LweI	GCATC	3 cut(s)	157, 251, 1807
MaeI	CTAG	3 cut(s)	854, 936, 1593
MaeII	ACGT	2 cut(s)	1309, 2106
MaeIII	GTNAC	4 cut(s)	787, 1027, 1179, 1601
MalI	GATC	6 cut(s)	350, 497, 1004, 1230, 1837, 2057
MboI	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
MflI	RGATCY	2 cut(s)	1002, 1835
MhlI	GDGCHC	3 cut(s)	1199, 1434, 2049
MlsI	TGGCCA	3 cut(s)	832, 975, 1728
MluCI	AATT	7 cut(s)	903, 997, 1056, 1567, 1907, 1918, 2097
MluNI	TGGCCA	3 cut(s)	832, 975, 1728
MlyI	GAGTC	5 cut(s)	784, 844, 1111, 1697, 2086
MmeI	TCCRAC	4 cut(s)	210, 584, 1884, 2071
MnlI	CCTC	9 cut(s)	15, 33, 226, 494, 611, 1257, 1622, 1968, 2079
Mox20I	TGGCCA	3 cut(s)	832, 975, 1728
Mph1103I	ATGCAT	2 cut(s)	244, 2023
MreI	CGCCGGCG	1 cut(s)	1931
MroNI	GCCGGC	1 cut(s)	1931
MroXI	GAANNNNTTC	1 cut(s)	1777
MscI	TGGCCA	3 cut(s)	832, 975, 1728
MseI	TTAA	4 cut(s)	582, 906, 996, 1760
MslI	CAYNNNNRTG	3 cut(s)	287, 710, 1025
Msp20I	TGGCCA	3 cut(s)	832, 975, 1728
MspA1I	CMGCKG	3 cut(s)	338, 686, 1262
MspI	CCGG	2 cut(s)	1582, 1932
MspR9I	CCNGG	3 cut(s)	1348, 1392, 1984
Mva1269I	GAATGC	1 cut(s)	259
MvaI	CCWGG	3 cut(s)	1348, 1392, 1984
MwoI	GCNNNNNNNGC	7 cut(s)	115, 656, 665, 854, 866, 875, 1031
NaeI	GCCGGC	1 cut(s)	1933
NdeI	CATATG	1 cut(s)	205
NdeII	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
NgoMIV	GCCGGC	1 cut(s)	1931
NmuCI	GTSAC	3 cut(s)	787, 1027, 1179
NsiI	ATGCAT	2 cut(s)	244, 2023
NspI	RCATGY	4 cut(s)	122, 242, 430, 1579
OliI	CACNNNNGTG	1 cut(s)	710
PaeI	GCATGC	2 cut(s)	122, 430
PagI	TCATGA	5 cut(s)	36, 193, 769, 1125, 2071
PaqCI	CACCTGC	1 cut(s)	71
PasI	CCCWGGG	1 cut(s)	1391
PciI	ACATGT	1 cut(s)	1575
PciSI	GCTCTTC	1 cut(s)	156
PctI	GAATGC	1 cut(s)	259
PdiI	GCCGGC	1 cut(s)	1933
PdmI	GAANNNNTTC	1 cut(s)	1777
PfeI	GAWTC	6 cut(s)	307, 1012, 1038, 1153, 1539, 1979
PflMI	CCANNNNNTGG	1 cut(s)	225
PkrI	GCNGC	9 cut(s)	211, 340, 432, 480, 751, 859, 1145, 1261, 1264
PleI	GAGTC	5 cut(s)	784, 844, 1111, 1697, 2085
PpsI	GAGTC	5 cut(s)	784, 844, 1111, 1697, 2085
Ppu21I	YACGTR	1 cut(s)	2107
PpuMI	RGGWCCY	2 cut(s)	1387, 1795
PscI	ACATGT	1 cut(s)	1575
PshBI	ATTAAT	1 cut(s)	996
Psp1406I	AACGTT	1 cut(s)	1309
Psp5II	RGGWCCY	2 cut(s)	1387, 1795
Psp6I	CCWGG	3 cut(s)	1346, 1390, 1982
PspFI	CCCAGC	1 cut(s)	341
PspGI	CCWGG	3 cut(s)	1346, 1390, 1982
PspPI	GGNCC	5 cut(s)	271, 1364, 1387, 1559, 1795
PspPPI	RGGWCCY	2 cut(s)	1387, 1795
PstNI	CAGNNNCTG	1 cut(s)	341
PsuI	RGATCY	2 cut(s)	1002, 1835
PvuII	CAGCTG	3 cut(s)	338, 686, 1262
RsaI	GTAC	7 cut(s)	23, 44, 690, 765, 951, 1215, 1715
RsaNI	GTAC	7 cut(s)	22, 43, 689, 764, 950, 1214, 1714
RseI	CAYNNNNRTG	3 cut(s)	287, 710, 1025
SapI	GCTCTTC	1 cut(s)	156
SaqAI	TTAA	4 cut(s)	582, 906, 996, 1760
SatI	GCNGC	9 cut(s)	210, 339, 431, 479, 750, 858, 1144, 1260, 1263
Sau3AI	GATC	6 cut(s)	348, 495, 1002, 1228, 1835, 2055
Sau96I	GGNCC	5 cut(s)	271, 1364, 1387, 1559, 1795
SchI	GAGTC	5 cut(s)	784, 844, 1111, 1697, 2086
ScrFI	CCNGG	3 cut(s)	1348, 1392, 1984
SduI	GDGCHC	3 cut(s)	1199, 1434, 2049
SfaNI	GCATC	3 cut(s)	157, 251, 1807
SgrAI	CRCCGGYG	1 cut(s)	1931
SinI	GGWCC	3 cut(s)	271, 1387, 1795
SmiMI	CAYNNNNRTG	3 cut(s)	287, 710, 1025
SmlI	CTYRAG	1 cut(s)	792
SmoI	CTYRAG	1 cut(s)	792
SphI	GCATGC	2 cut(s)	122, 430
Sse9I	AATT	7 cut(s)	903, 997, 1056, 1567, 1907, 1918, 2097
SsiI	CCGC	3 cut(s)	1079, 1425, 1552
SspMI	CTAG	3 cut(s)	854, 936, 1593
StyD4I	CCNGG	3 cut(s)	1346, 1390, 1982
StyI	CCWWGG	3 cut(s)	613, 935, 970
TaaI	ACNGT	9 cut(s)	536, 709, 787, 1522, 1718, 1813, 1864, 1960, 2051
TaiI	ACGT	2 cut(s)	1312, 2109
TasI	AATT	7 cut(s)	903, 997, 1056, 1567, 1907, 1918, 2097
TatI	WGTACW	5 cut(s)	688, 763, 949, 1213, 1713
TfiI	GAWTC	6 cut(s)	307, 1012, 1038, 1153, 1539, 1979
Tru1I	TTAA	4 cut(s)	582, 906, 996, 1760
Tru9I	TTAA	4 cut(s)	582, 906, 996, 1760
TscAI	CASTG	6 cut(s)	1177, 1188, 1723, 1818, 1867, 2056
TseFI	GTSAC	3 cut(s)	787, 1027, 1179
TseI	GCWGC	9 cut(s)	209, 338, 430, 478, 749, 857, 1143, 1259, 1262
Tsp45I	GTSAC	3 cut(s)	787, 1027, 1179
TspDTI	ATGAA	9 cut(s)	93, 174, 182, 210, 795, 1441, 1651, 1859, 1928
TspGWI	ACGGA	1 cut(s)	1773
TspRI	CASTG	6 cut(s)	1177, 1188, 1723, 1818, 1867, 2056
Van91I	CCANNNNNTGG	1 cut(s)	225
VneI	GTGCAC	1 cut(s)	1195
VpaK11BI	GGWCC	3 cut(s)	271, 1387, 1795
VspI	ATTAAT	1 cut(s)	996
XagI	CCTNNNNNAGG	1 cut(s)	1395
XapI	RAATTY	3 cut(s)	1567, 1907, 2097
XceI	RCATGY	4 cut(s)	122, 242, 430, 1579
XcmI	CCANNNNNNNNNTGG	5 cut(s)	15, 226, 996, 1375, 1810
XmaJI	CCTAGG	1 cut(s)	935
XmiI	GTMKAC	1 cut(s)	1409
XmnI	GAANNNNTTC	1 cut(s)	1777
XspI	CTAG	3 cut(s)	854, 936, 1593
Zsp2I	ATGCAT	2 cut(s)	244, 2023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.