RLG00000032534

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
16196878 .. 16201360
4483 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032534

Sequence Viewer

Length: 2379 bp
ATGGCTACTGATGAAGGCACTGATAACAAATTAGGAAGGGTGCGGGTTTTGGATCAGCAGTTTGATCAACCCATGGATGAAGAAGCTAAGAAGCTTAGAAATCCATATAATGAAAAGAAATTTTCAACATTAATGGTTATGCAGCTTGCATTTCAAAGCCTCGGTGTGGTCTATGGTGATTTAGGCACATCTCCTCTCTATGTGTTCTACAATACATTTCCTAATGGAATTAGTGACCCGGAGGATTTAGTTGGAGCTTTATCTGTCATCATATATTCCCTTACTCTAATTCCCCTCCTGAAGTATGTTTTTATTGTCTGTAGAGCAAATGACAACGGTCAAGGTGGAACATTTGCTCTTTATTCATTACTCTGTCGATATGCAAACATAAAGGCTATGCCGAACCAAGACCATACAGATGAGACTGTAACAACATATAGTAATTCCACATTTGGGGAGCAATCATTTGCTGCACGAACCAAGAGATGGTTGGAGGGACAAGCAATATTGAAGAACACTCTTCTAATTGTTGTTCTAGTTGGTTCCAGCATGGTGATTGGGGATGGGATTCTGACTCCAGCCATATCAGTTCTGTCAGCAGTTGGTGGGATCAATGTGCGCCGCTCTGAGATCAGTAATGATGTAGTTGTGTTTGTTGCTGTTGTTATGCTGGTACTACTGTTTACAGTGCAACACCATGGTACAGACAAAGTTGTTTGGTTGTTTGCACCAATAGTGCTCCTTTGGTTTCTCTTAATAGGAGGGATTGGCTTGTTCAACATTTGGAAATATGATAGTACCGTTCTAAAAGCTTTTTCACCTATGTATGTATATCGATTTTTTAAGAGGGGAGGAAAAGACGGTTGGACGTCTCTAGGAGGTATTATGCTTACCATAACAGGAACAGAAGTACTCTTTGCTGACCTGTCCCATTTCCCAGTCCTGTCAATACAGATAGCTTTCACATCAGTTGTATTTCCTTGCCTTCTTTTAGCATACTCTGGTCAGGCTGCCTACCTCATGAAGAATTCTGATAATGTGTTCAACGCTTTTTACCATTCTATTCCAGACAGCATATATTGGCCAGTGTTTGTAGTTGCTACTGCAGCTGCTGTTGTTGCAAGTCAGTCCACCATAACCGCAACTTTTTCACTAATCAAGCAGGCGCTTGCACTTGGCTGTTTCCCAAGGGTCAAAGTTGTACATACATCAAAGAAGTACCGTCACCACATATATATTCCAGAAGTTAATTGGCTTGTTATGATTCTCTGCATTGTTGTAACAGCTGGCTTTAAAAATCAAAACCAAATTGGTAACGCCTCCGGGACGGCGGTTTGTATAGTCATGTTGGTAACCACATTGCTTATGATTTTGGTCATGATATTGGTCTGGCGCTGCCATTTGATTCTTATCCTCCTCTTCACTGGTTTATCACTACTAATAGAGGGCACTTACTTCTCTGCTGTACTCCTCAAGATCAATCAAGGTGGCTGGGTTCCTCTTGTGATCTCAGCAGCCTTCTTTATTGTTATGTATGCTTGGCATTATGGTACAGTAAAACGTTACGAGATTGAAGTCCACAGTCAGGTCTCGACGGCATGGATTCTCGGACTTGGTCCCAGTTTAGGATTGGTTCGTGTGCCTGGGATAGGCCTTGTGTACACTGAGCTAGCAAGTGGAGTGCCTCGCATCTTTTCTCACTTGATCACCAACCTACCCGCCATCCATAATGTTGTTGTCTTTGTCTGTGTGAAGTACCTTCCTGTCTACACAGTCCAAGAAGAAGAAAGGTTCCTTGTAAAGCGGATTGGCCCAAAGAATTTCCACATGTTTCGCTGCGTTGCAAGATATGGCTATAAAGATATCCACACAAAAGATGACGATTTTGAGAAAAAACTCTTTGCCAGTCTTTTCTTGTTTCTTCTGGTAGAGTCATTGGCAGAACCATCTTCTGGCTCTGATATATCTAGCTTACTTGGTCAGCAAACTAGGCAATCAAGAAGTAGCACGTTCAATAGTATCAGCAACATACCTTACTCCACCGCAGACCTGTCAATTCAGTCGAATGACTCAATCGTGCCTGCTGGTTCTCCACTTCATGAAAACAACACTCTGACATCCTCTGATATTCAGCCAAGCAGCCAGGTGGTCGAAGACGAGATTGATGAGACTGAGTTCTTGAACAACTGTAGAGATGTAGGGGTAGTGCACATACTTGGAAACACTGTAGTGAGAGCCAGCAGGAACTCAAACTTTTGGAAGAGAATAACTATTGATTACCTATATGCATTTCTTAGGAAGATATGTTGGGGAAACAGTGTAATGCTTAATGTTCCTCATGAGAGTCTCTTGAATGTTGGGCAGGTATTATATGTATGA

Protein Analysis

793

Amino Acids

88.02

Weight (kDa)

7.59

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 49 - 534 2.6e-157 K+ potassium transporter integral membrane domain
K_trans_C PF22776 548 - 789 9.8e-22 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 872
Acc36I ACCTGC 1 cut(s) 2353
AccB7I CCANNNNNTGG 2 cut(s) 486, 1952
AccBSI CCGCTC 1 cut(s) 624
AccI GTMKAC 1 cut(s) 1767
AciI CCGC 7 cut(s) 43, 622, 1140, 1331, 1719, 1804, 2043
AclI AACGTT 1 cut(s) 1561
AclWI GGATC 2 cut(s) 60, 617
AcoI YGGCCR 1 cut(s) 1082
AcsI RAATTY 3 cut(s) 119, 1027, 1819
AcuI CTGAAG 1 cut(s) 320
AcyI GRCGYC 1 cut(s) 869
AfiI CCNNNNNNNGG 7 cut(s) 166, 453, 486, 1585, 1625, 1649, 1952
AflIII ACRYGT 1 cut(s) 1827
AgsI TTSAA 9 cut(s) 126, 155, 511, 778, 1045, 1574, 2014, 2182, 2353
AjnI CCWGG 2 cut(s) 1642, 2142
AjuI GAANNNNNNNTTGG 2 cut(s) 847, 879
AleI CACNNNNGTG 1 cut(s) 2228
Alw21I GWGCWC 2 cut(s) 741, 2211
Alw26I GTCTC 5 cut(s) 416, 876, 1594, 2162, 2351
Alw44I GTGCAC 1 cut(s) 2207
AlwI GGATC 2 cut(s) 60, 617
AlwNI CAGNNNCTG 1 cut(s) 1112
AoxI GGCC 3 cut(s) 1082, 1651, 1810
ApaLI GTGCAC 1 cut(s) 2207
ApeKI GCWGC 9 cut(s) 142, 470, 1010, 1106, 1109, 1395, 1514, 1836, 2139
ApoI RAATTY 3 cut(s) 119, 1027, 1819
AseI ATTAAT 1 cut(s) 131
AspLEI GCGC 3 cut(s) 621, 1168, 1395
AspS9I GGNCC 2 cut(s) 1616, 1811
AsuC2I CCSGG 2 cut(s) 239, 1324
AsuHPI GGTGA 5 cut(s) 188, 565, 810, 1217, 1699
AsuNHI GCTAGC 1 cut(s) 1669
AvaII GGWCC 1 cut(s) 1616
BaeGI GKGCMC 2 cut(s) 1451, 2211
BaeI ACNNNNGTAYC 2 cut(s) 665, 698
BalI TGGCCA 1 cut(s) 1084
BbsI GAAGAC 1 cut(s) 2160
Bbv12I GWGCWC 2 cut(s) 741, 2211
BbvI GCAGC 9 cut(s) 154, 457, 997, 1096, 1118, 1382, 1526, 1823, 2151
BccI CCATC 4 cut(s) 480, 557, 1730, 1954
BceAI ACGGC 2 cut(s) 1344, 1611
BciT130I CCWGG 2 cut(s) 1644, 2144
BclI TGATCA 2 cut(s) 64, 1704
BcnI CCSGG 2 cut(s) 239, 1324
BcoDI GTCTC 5 cut(s) 416, 876, 1594, 2162, 2351
BfaI CTAG 5 cut(s) 536, 875, 1670, 1968, 1989
BfmI CTRYAG 4 cut(s) 319, 1104, 2188, 2226
BfoI RGCGCY 2 cut(s) 1169, 1396
BfuAI ACCTGC 1 cut(s) 2353
BmcAI AGTACT 1 cut(s) 912
Bme1390I CCNGG 4 cut(s) 239, 1324, 1644, 2144
Bme18I GGWCC 1 cut(s) 1616
BmgT120I GGNCC 2 cut(s) 1616, 1811
BmiI GGNNCC 4 cut(s) 544, 1497, 1618, 1793
BmrFI CCNGG 4 cut(s) 239, 1324, 1644, 2144
BmrI ACTGGG 2 cut(s) 932, 1614
BmsI GCATC 1 cut(s) 1698
BmtI GCTAGC 1 cut(s) 1673
BmuI ACTGGG 2 cut(s) 932, 1614
BoxI GACNNNNGTC 1 cut(s) 336
BpiI GAAGAC 1 cut(s) 2160
BpmI CTGGAG 1 cut(s) 561
BpuEI CTTGAG 1 cut(s) 1457
BpuMI CCSGG 2 cut(s) 239, 1324
Bsa29I ATCGAT 1 cut(s) 835
BsaBI GATNNNNATC 1 cut(s) 1409
BsaHI GRCGYC 1 cut(s) 869
BsaI GGTCTC 1 cut(s) 1594
BsaJI CCNNGG 5 cut(s) 72, 160, 697, 1187, 1643
Bsc4I CCNNNNNNNGG 7 cut(s) 166, 453, 486, 1585, 1625, 1649, 1952
Bse1I ACTGG 5 cut(s) 938, 1085, 1429, 1620, 1905
Bse3DI GCAATG 1 cut(s) 1358
Bse8I GATNNNNATC 1 cut(s) 1409
BseBI CCWGG 2 cut(s) 1644, 2144
BseCI ATCGAT 1 cut(s) 835
BseDI CCNNGG 5 cut(s) 72, 160, 697, 1187, 1643
BseGI GGATG 4 cut(s) 82, 568, 1722, 2117
BseJI GATNNNNATC 1 cut(s) 1409
BseLI CCNNNNNNNGG 7 cut(s) 166, 453, 486, 1585, 1625, 1649, 1952
BseMI GCAATG 1 cut(s) 1358
BseMII CTCAG 4 cut(s) 618, 1524, 1656, 2163
BseNI ACTGG 5 cut(s) 938, 1085, 1429, 1620, 1905
BseRI GAGGAG 3 cut(s) 183, 1406, 1460
BseSI GKGCMC 2 cut(s) 1451, 2211
BseXI GCAGC 9 cut(s) 154, 457, 997, 1096, 1118, 1382, 1526, 1823, 2151
BseYI CCCAGC 1 cut(s) 1491
BsgI GTGCAG 1 cut(s) 456
BshFI GGCC 3 cut(s) 1084, 1653, 1812
BshVI ATCGAT 1 cut(s) 835
BsiHKAI GWGCWC 2 cut(s) 741, 2211
BsiSI CCGG 2 cut(s) 239, 1323
BslFI GGGAC 4 cut(s) 510, 913, 1339, 1602
BslI CCNNNNNNNGG 7 cut(s) 166, 453, 486, 1585, 1625, 1649, 1952
BsmAI GTCTC 5 cut(s) 416, 876, 1594, 2162, 2351
BsmBI CGTCTC 1 cut(s) 876
BsmFI GGGAC 4 cut(s) 510, 913, 1339, 1602
BsnI GGCC 3 cut(s) 1084, 1653, 1812
Bso31I GGTCTC 1 cut(s) 1594
Bsp1286I GDGCHC 3 cut(s) 741, 1451, 2211
Bsp1407I TGTACA 2 cut(s) 1201, 1659
Bsp143I GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
Bsp19I CCATGG 2 cut(s) 72, 697
BspACI CCGC 7 cut(s) 43, 622, 1140, 1331, 1719, 1804, 2043
BspANI GGCC 3 cut(s) 1084, 1653, 1812
BspCNI CTCAG 4 cut(s) 619, 1523, 1657, 2164
BspDI ATCGAT 1 cut(s) 835
BspHI TCATGA 4 cut(s) 1020, 1377, 2098, 2338
BspLI GGNNCC 4 cut(s) 544, 1497, 1618, 1793
BspMAI CTGCAG 1 cut(s) 1108
BspMI ACCTGC 1 cut(s) 2353
BspOI GCTAGC 1 cut(s) 1673
BspPI GGATC 2 cut(s) 60, 617
BspTNI GGTCTC 1 cut(s) 1594
BsrBI CCGCTC 1 cut(s) 624
BsrDI GCAATG 1 cut(s) 1358
BsrGI TGTACA 2 cut(s) 1201, 1659
BsrI ACTGG 5 cut(s) 938, 1085, 1429, 1620, 1905
BssECI CCNNGG 5 cut(s) 72, 160, 697, 1187, 1643
BssMI GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
BssNI GRCGYC 1 cut(s) 869
BssT1I CCWWGG 3 cut(s) 72, 697, 1187
Bst2UI CCWGG 2 cut(s) 1644, 2144
Bst6I CTCTTC 3 cut(s) 525, 1424, 2255
BstACI GRCGYC 1 cut(s) 869
BstAUI TGTACA 2 cut(s) 1201, 1659
BstC8I GCNNGC 7 cut(s) 147, 1164, 1170, 1288, 1671, 2082, 2239
BstDEI CTNAG 7 cut(s) 87, 95, 627, 1510, 1665, 2172, 2294
BstDSI CCRYGG 2 cut(s) 72, 697
BstEII GGTNACC 1 cut(s) 1351
BstENI CCTNNNNNAGG 1 cut(s) 1647
BstF5I GGATG 4 cut(s) 82, 568, 1722, 2117
BstH2I RGCGCY 2 cut(s) 1169, 1396
BstHHI GCGC 3 cut(s) 621, 1168, 1395
BstKTI GATC 7 cut(s) 55, 67, 612, 633, 1479, 1509, 1707
BstMAI GTCTC 5 cut(s) 416, 876, 1594, 2162, 2351
BstMBI GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
BstMWI GCNNNNNNNGC 3 cut(s) 1106, 1118, 1990
BstNI CCWGG 2 cut(s) 1644, 2144
BstNSI RCATGY 1 cut(s) 1831
BstPAI GACNNNNGTC 1 cut(s) 336
BstPI GGTNACC 1 cut(s) 1351
BstSCI CCNGG 4 cut(s) 237, 1322, 1642, 2142
BstSFI CTRYAG 4 cut(s) 319, 1104, 2188, 2226
BstSLI GKGCMC 2 cut(s) 1451, 2211
BstV1I GCAGC 9 cut(s) 154, 457, 997, 1096, 1118, 1382, 1526, 1823, 2151
BstV2I GAAGAC 1 cut(s) 2160
Bsu15I ATCGAT 1 cut(s) 835
BsuRI GGCC 3 cut(s) 1084, 1653, 1812
BsuTUI ATCGAT 1 cut(s) 835
BtgI CCRYGG 2 cut(s) 72, 697
BtsCI GGATG 4 cut(s) 82, 568, 1722, 2117
BtsIMutI CAGTG 7 cut(s) 18, 693, 1092, 1422, 1662, 2223, 2323
BveI ACCTGC 1 cut(s) 2353
Cac8I GCNNGC 7 cut(s) 147, 1164, 1170, 1288, 1671, 2082, 2239
CaiI CAGNNNCTG 1 cut(s) 1112
CciI TCATGA 4 cut(s) 1020, 1377, 2098, 2338
CfoI GCGC 3 cut(s) 621, 1168, 1395
Cfr13I GGNCC 2 cut(s) 1616, 1811
ClaI ATCGAT 1 cut(s) 835
CspCI CAANNNNNGTGG 2 cut(s) 1468, 1503
DdeI CTNAG 7 cut(s) 87, 95, 627, 1510, 1665, 2172, 2294
DpnI GATC 7 cut(s) 54, 66, 611, 632, 1478, 1508, 1706
DpnII GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
DraI TTTAAA 1 cut(s) 1294
EaeI YGGCCR 1 cut(s) 1082
Eam1104I CTCTTC 3 cut(s) 525, 1424, 2255
EarI CTCTTC 3 cut(s) 525, 1424, 2255
Eco130I CCWWGG 3 cut(s) 72, 697, 1187
Eco147I AGGCCT 1 cut(s) 1653
Eco31I GGTCTC 1 cut(s) 1594
Eco32I GATATC 1 cut(s) 1864
Eco47I GGWCC 1 cut(s) 1616
Eco57I CTGAAG 1 cut(s) 320
Eco91I GGTNACC 1 cut(s) 1351
EcoNI CCTNNNNNAGG 1 cut(s) 1647
EcoO65I GGTNACC 1 cut(s) 1351
EcoRI GAATTC 1 cut(s) 1027
EcoRII CCWGG 2 cut(s) 1642, 2142
EcoRV GATATC 1 cut(s) 1864
EcoT14I CCWWGG 3 cut(s) 72, 697, 1187
EcoT22I ATGCAT 1 cut(s) 2290
ErhI CCWWGG 3 cut(s) 72, 697, 1187
Esp3I CGTCTC 1 cut(s) 876
FaqI GGGAC 4 cut(s) 510, 913, 1339, 1602
FauI CCCGC 2 cut(s) 36, 1726
FbaI TGATCA 2 cut(s) 64, 1704
FblI GTMKAC 1 cut(s) 1767
FokI GGATG 4 cut(s) 89, 575, 1709, 2104
FspBI CTAG 5 cut(s) 536, 875, 1670, 1968, 1989
GlaI GCGC 3 cut(s) 620, 1167, 1394
GsaI CCCAGC 1 cut(s) 1495
GsuI CTGGAG 1 cut(s) 561
HaeII RGCGCY 2 cut(s) 1169, 1396
HaeIII GGCC 3 cut(s) 1084, 1653, 1812
HapII CCGG 2 cut(s) 239, 1323
HhaI GCGC 3 cut(s) 621, 1168, 1395
Hin1I GRCGYC 1 cut(s) 869
Hin6I GCGC 3 cut(s) 619, 1166, 1393
HinP1I GCGC 3 cut(s) 619, 1166, 1393
HindIII AAGCTT 2 cut(s) 92, 810
HinfI GANTC 8 cut(s) 568, 574, 1264, 1405, 1603, 1931, 2069, 2344
HpaII CCGG 2 cut(s) 239, 1323
HphI GGTGA 5 cut(s) 188, 565, 810, 1217, 1699
Hpy166II GTNNAC 7 cut(s) 684, 1131, 1579, 1660, 1662, 1768, 2209
Hpy188I TCNGA 7 cut(s) 573, 628, 1033, 1610, 1960, 2115, 2125
Hpy8I GTNNAC 7 cut(s) 684, 1131, 1579, 1660, 1662, 1768, 2209
Hpy99I CGWCG 1 cut(s) 1597
HpyAV CCTTC 5 cut(s) 8, 30, 995, 1528, 1769
HpyCH4IV ACGT 3 cut(s) 869, 1561, 2009
HpyF10VI GCNNNNNNNGC 3 cut(s) 1106, 1118, 1990
HpyF3I CTNAG 7 cut(s) 87, 95, 627, 1510, 1665, 2172, 2294
HpySE526I ACGT 3 cut(s) 869, 1561, 2009
Hsp92I GRCGYC 1 cut(s) 869
HspAI GCGC 3 cut(s) 619, 1166, 1393
Ksp22I TGATCA 2 cut(s) 64, 1704
Kzo9I GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
LmnI GCTCC 3 cut(s) 254, 457, 744
Lsp1109I GCAGC 9 cut(s) 154, 457, 997, 1096, 1118, 1382, 1526, 1823, 2151
LweI GCATC 1 cut(s) 1698
MaeI CTAG 5 cut(s) 536, 875, 1670, 1968, 1989
MaeII ACGT 3 cut(s) 869, 1561, 2009
MaeIII GTNAC 7 cut(s) 233, 427, 1223, 1279, 1313, 1351, 1562
MalI GATC 7 cut(s) 54, 66, 611, 632, 1478, 1508, 1706
MbiI CCGCTC 1 cut(s) 624
MboI GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
MhlI GDGCHC 3 cut(s) 741, 1451, 2211
MlsI TGGCCA 1 cut(s) 1084
MluNI TGGCCA 1 cut(s) 1084
MlyI GAGTC 4 cut(s) 568, 1940, 2063, 2353
MmeI TCCRAC 3 cut(s) 232, 471, 845
Mox20I TGGCCA 1 cut(s) 1084
Mph1103I ATGCAT 1 cut(s) 2290
MscI TGGCCA 1 cut(s) 1084
MseI TTAA 6 cut(s) 131, 755, 843, 1248, 1293, 2328
MslI CAYNNNNRTG 2 cut(s) 417, 2228
Msp20I TGGCCA 1 cut(s) 1084
MspA1I CMGCKG 2 cut(s) 1109, 1286
MspI CCGG 2 cut(s) 239, 1323
MspR9I CCNGG 4 cut(s) 239, 1324, 1644, 2144
MvaI CCWGG 2 cut(s) 1644, 2144
MwoI GCNNNNNNNGC 3 cut(s) 1106, 1118, 1990
NciI CCSGG 2 cut(s) 239, 1324
NcoI CCATGG 2 cut(s) 72, 697
NdeII GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
NheI GCTAGC 1 cut(s) 1669
NlaIV GGNNCC 4 cut(s) 544, 1497, 1618, 1793
NmuCI GTSAC 2 cut(s) 233, 1223
NsiI ATGCAT 1 cut(s) 2290
NspI RCATGY 1 cut(s) 1831
OliI CACNNNNGTG 1 cut(s) 2228
PagI TCATGA 4 cut(s) 1020, 1377, 2098, 2338
PceI AGGCCT 1 cut(s) 1653
PciI ACATGT 1 cut(s) 1827
PfeI GAWTC 4 cut(s) 568, 1264, 1405, 1603
PflFI GACNNNGTC 1 cut(s) 1614
PflMI CCANNNNNTGG 2 cut(s) 486, 1952
PfoI TCCNGGA 1 cut(s) 1322
PleI GAGTC 4 cut(s) 568, 1939, 2063, 2352
PpsI GAGTC 4 cut(s) 568, 1939, 2063, 2352
PscI ACATGT 1 cut(s) 1827
PshAI GACNNNNGTC 1 cut(s) 336
PshBI ATTAAT 1 cut(s) 131
Psp1406I AACGTT 1 cut(s) 1561
Psp6I CCWGG 2 cut(s) 1642, 2142
PspEI GGTNACC 1 cut(s) 1351
PspFI CCCAGC 1 cut(s) 1491
PspGI CCWGG 2 cut(s) 1642, 2142
PspN4I GGNNCC 4 cut(s) 544, 1497, 1618, 1793
PspPI GGNCC 2 cut(s) 1616, 1811
PstI CTGCAG 1 cut(s) 1108
PstNI CAGNNNCTG 1 cut(s) 1112
PsyI GACNNNGTC 1 cut(s) 1614
PvuII CAGCTG 2 cut(s) 1109, 1286
RseI CAYNNNNRTG 2 cut(s) 417, 2228
SaqAI TTAA 6 cut(s) 131, 755, 843, 1248, 1293, 2328
Sau3AI GATC 7 cut(s) 52, 64, 609, 630, 1476, 1506, 1704
Sau96I GGNCC 2 cut(s) 1616, 1811
ScaI AGTACT 1 cut(s) 912
SchI GAGTC 4 cut(s) 568, 1940, 2063, 2353
ScrFI CCNGG 4 cut(s) 239, 1324, 1644, 2144
SduI GDGCHC 3 cut(s) 741, 1451, 2211
SfaNI GCATC 1 cut(s) 1698
SfcI CTRYAG 4 cut(s) 319, 1104, 2188, 2226
SinI GGWCC 1 cut(s) 1616
SmiMI CAYNNNNRTG 2 cut(s) 417, 2228
SmlI CTYRAG 1 cut(s) 1472
SmoI CTYRAG 1 cut(s) 1472
SseBI AGGCCT 1 cut(s) 1653
SsiI CCGC 7 cut(s) 43, 622, 1140, 1331, 1719, 1804, 2043
SspI AATATT 1 cut(s) 507
SspMI CTAG 5 cut(s) 536, 875, 1670, 1968, 1989
StuI AGGCCT 1 cut(s) 1653
StyD4I CCNGG 4 cut(s) 237, 1322, 1642, 2142
StyI CCWWGG 3 cut(s) 72, 697, 1187
TaiI ACGT 3 cut(s) 872, 1564, 2012
TaqI TCGA 5 cut(s) 376, 835, 1592, 2063, 2151
TatI WGTACW 4 cut(s) 910, 1201, 1465, 1659
TauI GCSGC 1 cut(s) 624
TfiI GAWTC 4 cut(s) 568, 1264, 1405, 1603
Tru1I TTAA 6 cut(s) 131, 755, 843, 1248, 1293, 2328
Tru9I TTAA 6 cut(s) 131, 755, 843, 1248, 1293, 2328
TscAI CASTG 7 cut(s) 25, 693, 1092, 1429, 1669, 2230, 2323
TseFI GTSAC 2 cut(s) 233, 1223
TseI GCWGC 9 cut(s) 142, 470, 1010, 1106, 1109, 1395, 1514, 1836, 2139
Tsp45I GTSAC 2 cut(s) 233, 1223
TspDTI ATGAA 7 cut(s) 27, 93, 126, 354, 1037, 2087, 2115
TspRI CASTG 7 cut(s) 25, 693, 1092, 1429, 1669, 2230, 2323
Tth111I GACNNNGTC 1 cut(s) 1614
Van91I CCANNNNNTGG 2 cut(s) 486, 1952
VneI GTGCAC 1 cut(s) 2207
VpaK11BI GGWCC 1 cut(s) 1616
VspI ATTAAT 1 cut(s) 131
XagI CCTNNNNNAGG 1 cut(s) 1647
XapI RAATTY 3 cut(s) 119, 1027, 1819
XceI RCATGY 1 cut(s) 1831
XcmI CCANNNNNNNNNTGG 3 cut(s) 487, 1248, 1627
XmiI GTMKAC 1 cut(s) 1767
XspI CTAG 5 cut(s) 536, 875, 1670, 1968, 1989
ZraI GACGTC 1 cut(s) 870
ZrmI AGTACT 1 cut(s) 912
Zsp2I ATGCAT 1 cut(s) 2290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.