Rorug05G0059500

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
5195301 .. 5205592
10292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0059500.1

Sequence Viewer

Length: 5298 bp
ATGAATCTCCGGCAACGTATGCCGGCCACGCGCGCCTACGCGCTGCCGGAGATGCAAGAGGCCTTCAACATAATCCCCATCCACAACCTCCTCGCCGACCACCCCTCCCTCCGCTACCCGGAGATACGCGCCGCGGCGGCCGCCCTTCGCGCCGTCGGGGACCTCCGGAAGCCGCCGTTCGTGCCTTGGAAAAGCGACTACGACCTGATGAACTGGCTCGGAATCTTCTTCGGTTTCCAAACCGACAACGTTCGGAACCAGCGGGAGCACCTGGTCCTCCACCTCGCCAACTCCCAAATGCAGCTCCAGCCTCCGCCCAACCTCGCCGACGTCCTCGAGGCCGGCGTCCTCCGCCGCTTCCGCCGCAAATTGCTCGGAAACTACACCTCCTGGTGCGCCTACCTCGGCCGCAGATCAAACGCCGTCGTTCCCCGTCGCCGCCCCGACCATCTCCGCCGCGAGCTGCTCTACGTGGCGCTGTACCTGCTCGTCTGGGGTGAGTCCGGTAACCTGAGATTTACTCCCGAGTGTATTTGTTACATTTACCATCATATGGCTATGGAGCTCAATCAGGTCCTTGACGAGGACATTGACCCCGAGACGGGTCGGCCCTTTGTCCCCTCTGTCTCCGGTGAAAATGCTTTTTTGAAGAGTGTGATTATGCCGATTTACGTTACTATTAAGGATGAGGTTGAGGACAGTAGAAATGGCACCAGGCCGCACTCGGCCTGGCGCAACTATGATGATATCAATGAGTACTTTTGGTCCAGGAGGTGTTTCAAGAGTCTCAAATGGCCTATTGATTACAGGAGTAATTTTTTCAGTACAACTCCGAAGGAGAGCAGGGTGGGGAAGACTGGGTTTGTGGAGCAGAGGTCGTTTTGGAATCTGTTTAGGAGCTTCGACAAGCTGTGGGTGTTGTTGATCTTGTTTTTGCAAGCTGCTCTTATTGTGGCTTGGGAGGGGAAAGAGTATCCGTGGACGGCATTGGAGAGTAGGGACGTGCAGGCGCGGTTGTTGACTGTGTTTATTACTTGGGGGGGTCTTAGGGTGCTTCAGGCAGTGCTTGATGCTGGGACTCAGTATAGTTTGGTGACGAGGGAGACTATGTTGCTTGGGGTGAGAATGGTGCTAAAGGTGGCGGTTGCAATAACGTGGACTATTCTATTTGCGGTGTTTTATGCGGGCATTTGGGCTCAGAAGAATTCCGATGGGAGGTGGTCTGCTGAAGCAAATAGCAAGATTGTTGATTTTTGTTGGGCTGTACTGTTTTTTGTTATTCCAGAATTGCTGGCATTGGTTCTGTTTATAGTTCCTTGGGTGAGGAACTTCATTGAAGAGTTAAATTGTAATGCAATTTATGTGTTTACGTGGTGGTTTCACACCCGGATTTTTGTTGGTCGCGCACTGAGGGAAGGGCTTGTCAGTAATGTCAAATACACAGTGTTCTGGATTATTGTGTTGGCTTCAAAGTTTGCTTTCAGTTATTTCCTTCAGATCAAGCCGCTTGTTAACACGACAAAGACTCTCATGAAGATTAAGGTTCACACATACAAGATGCATGTTTTTTTTGAGGGGACTAATGTAATAGCAGTTGTGTTGTTGTGGATTCCGGTTGTGTTGATTTACCTGATGGATCTGCAGATATGGTATGCCATTCACTCATCCTTTATTGGTGCAACAATTGGGCTGTTTTCACATTTGGGGGAGATAAGGAATATCAAACAGCTGAGGCTTAGGTTTCAGTTTTTTGCTAGTGCATTGCAATTTAATCTCATGCCAGAGGAGCAGCCATTACGTCCTGAGCTGACAATGGTGAAGAAACTCCGCGATGCCATACACAGGCTGAGGTTGCGGTATGGACTTGGTCAAGCCTACAAGAAGACTGAATCAAGCCAAATAGAAGCTACCAGGTTTGCCTTGATATGGAATGAAATCATGACAACTTTCAGGGAGGAAGATCTTATCAGTGATGGAGAACTTGAGCTCATGGAACTGCCACCTAATTGTTGGCACATTAGAGTTATTCGCTGGCCGTGTTTCCTCCTTGCAAATGAACTATTGCTTGCTCTACGTCAGGCAACGGAGCTGGCAGACGAACCTGATCAGTTGCTTTGGTTGAGGATATGCAAGAGTGAGTATCGGCGCTGTGCTGTCATTGAAGCTTTTGATAGCATAAGGTATCTGCTTCTTACGGTTGTTAGACATGGCACAGAAGAAAATTCCATCATTGACCATTTTTTCAGGGAGATAGATCAATGTATTGAGAATCAGAAGTTCACGGTTACGTACAGGATGTCTCTGCTTCCGCAAATTCATGCCAAGTTAATTTCTCTTATTGACCTTCTGCTGCAATTAAAGAAAGATACAAGTAAGATAGTGGATATATTGCAGGCCCTGTATGAACTCTCTGTTCGTGAATTCCCAAGGGTAAAGAGGTCCATGCAGACATTGAGGGTGGAAGGCCTGGCAACTCATAGTAGATCCACTGAAGAAGGCTTGCTTTTTGAAAATGCGATTCAGTTTCCTGATGATGAGGATGCAACCTTCTTTAGGCATCTGCGACGTCTGCATACAATTCTCACTTCTAGAGACTCGATGCAGAATGTCCCAGTGAATATTGATGCAAGAAAGCGCATTGCTTTCTTTAGCAATTCACTTTTCATGAATATGCCCCGTGCTCCCTATGTTGAGAAAATGATGGCTTTCAGTGTCCTGACTCCATATTATGATGAGGAAGTGTTGTATGGCAAAGAATCTCTTCGATCTGAGAACGAAGATGGGATTTCCACCTTGTTTTATCTGCAGAAGATTTATGAAGGTGAGTGGGCGAACTTTCTGGAACGGATGTACAGAGAGGGCATGAAGAGTGACGAGGAACTCTTTACTACGAAGGCAAGGGATCTCCGCGTTTGGGCATCATACAGGGGCCAGACATTATCGCGTACTGTGAGAGGAATGATGTACTACTATAGGGCACTGAAGATGCTTGCCTTTCTTGATTCTGCATCTGAGATGGATATAAGGGATGGATCACAGCAAGTTGCCTCTCATGGTTTGATGACCCAAAATAACATTACGGATGGTGTACAGTCAGGTTTGCAACCAGCTTCACGAAAACTCGGAAGAACAGCCAGTGTGGCTTATTTATTCAAGGGCCATGAACGTGGCATTGCTATGTTGAAATTCACGTATGTGGTTGCCTGCCAACTATATGGGCAACATAAGGCTAAGGGAGATCCCCGTGCTGAGGAGATATTATTTCTGATGAAAAACAATGAGGCCCTTCGAGTGGCCTATGTTGATGAGGTAGTGTTGGGGAGAGATGAGGTTGAGTATTACTCTGTGCTTGTTAAATTTGATCAGCAGATCCAAAGGGAGGTAGAGATCTATCGGATCAGGTTGCCTGGTCCCCTGAAGCTCGGTGAAGGCAAACCAGAGAATCAAAACCATGCCATAATCTTTACCAGGGGTGATGCAATTCAGACAATTGACATGAACCAAGACAATTCTTTTGAGGAGGCACTCAAAATGCGGAATTTGCTGGAGGAATTCAAGAACTTTTATGGCCTCAGAAAGCCAACTATCTTGGGTGTCCGTGAGGATATCTTCACAGGTTCTGTATCATCCCTTGCTTGGTTCATGTCTGCTCAGGAGATGAGTTTTGTGACCCTGAACCAGCGTGTTCTGGCAAACCCTTTGAAGGTGCGAATGCACTATGGTCACCCAGATGTGTTTGACAGGTTCTGGTTCTTGCAGCGGGGTGGAATCAGCAAGGCTTCTAAAGTTATCAATATCAGTGAGGACATATTTGCTGGCTTCAATTGCACACTGCGAGGTGGCAATGTGACTCACCATGAATATATACAGGTGGGCAAGGGAAGGGATGTTGGGTTGAATCAGATCTCCATGTTTGAGGCCATGGTTGCTAGTGGCAACGGTGAGCAGGCTTTGAGCAGAGATGTGTATCGATTGGGTCATAGATTGGACTTCTTTCGGATGCTTTCATTTTTCTATTCAACTGTTGGGTTCTACTTTAACACGATGATAGTGGTACTGACTGTTTATTCATTCTTGTGGGGCCGCCTTTTTCTTGCTCTCAGTGGTGTCGAGGACGATCTTGACACAAGCAACAATAAAGCAGTTGGTGTGATGTTAAATCAGCAGTTCATTATCCAGCTAGGGCTGTTCACCGCCCTTCCAATGATTGTTGAGAGCTCTCTCGAACAGGGTTTCCTTACAGCAGTTTGGGACTTCTTAACAATGCAGTTGCAGCTTGCTTCAGTCTTTTACACATTCTCCATGGGAACCCGTACCCATTACTTTGGTCGTACTATTCTTCATGGGGGTGCAAAGTACCGAGCAACTGGACGTGGCTTTGTGGTCCAGCACAAGAGCTTTGCTGAGAACTATCGACTCTACTCTCGCAGCCATTTTGTGAAGGCAATTGAGCTTGGGATTATTTTAGTAGTGTATGCTGCTCATACCAGCGTGGCTCGAGATACCTTTGTTTACATTGGCATGAGTATCTCAAGCTGGTTTCTGGTAGTGTCATGGATGCTGGCTCCCTTTATTTTTAACCCTTCTGGATTTGATTGGCTGAAAACTGTCTATGACTTTGATGATTTTATAAGTTGGTTATGGTATTCTGGAGGGGTGTTTACAAAAGCTGAACTGAGCTGGGAAACATGGTGGTATGAGGAACAGGACCATTTGAGAACAACTGGGCTTTGGGGAAAGCTATTGGAAATTATTTTGGATCTTCGTTTCTTCTTCTTCCAGTATGGTGTTGTGTATCAACTACGTATTGTCCATGGAAACAAAAGTATAGGTGTTTACTTGCTGTCTTGGATATACATGGTTGTAGCTGTTGGGATTTATATGACCATATCCTGGGCTCAGAACAAATATGCAGCGAAGAAACATATATACTACCGGCTAGTTCAGCTTTGTGTCATAAAGGTTATGGTACTCTTTATTGTTTTACTGCTGGAGTTCACTAGATTCAAGTTCCTTGACATTCTCTCAAGTCTCTTGGCATTCATCCCTACTGGCTGGGGTATAATTTTAATAGCTCAAGTGCTTAGACCTTTTCTGCAGACCACAGTGGTGTGGGATACTGTGGTTTCCTTGGCTCGAATTTATGATATGCTTTTTGGAGTAACTGTTATGGCTCCTGTGGGGCTGCTGTCATGGTTACCTGGATTTCAGTCAATGCAGACCAGGATCTTGTTCAATGAAGCATTCAGCAGAGGTCTCCAGATATCTCGTATCCTTACTGGCAAAAAGTCTAACTGA

Protein Analysis

1765

Amino Acids

204.9

Weight (kDa)

9.0

Isoelectric Point (pI)

41.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 154 - 266 2.9e-43 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 679 - 862 5.5e-28 Callose synthase 1 domain
Glucan_synthase PF02364 870 - 1666 6.5e-252 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4631
AatII GACGTC 2 cut(s) 333, 2569
AbsI CCTCGAGG 1 cut(s) 335
Acc36I ACCTGC 1 cut(s) 492
AccB1I GGYRCC 1 cut(s) 710
AccB7I CCANNNNNTGG 2 cut(s) 553, 4893
AccIII TCCGGA 1 cut(s) 165
AclI AACGTT 1 cut(s) 249
AclWI GGATC 9 cut(s) 1644, 2478, 2910, 3040, 3233, 3364, 3404, 4767, 5234
AcoI YGGCCR 4 cut(s) 24, 138, 406, 2033
AcsI RAATTY 9 cut(s) 1204, 2221, 2313, 2420, 3185, 3356, 3538, 3551, 5139
AcuI CTGAAG 7 cut(s) 1040, 1248, 1478, 2511, 3002, 3437, 4266
AcyI GRCGYC 3 cut(s) 330, 345, 2566
AjiI CACGTC 2 cut(s) 1003, 4373
AleI CACNNNNGTG 2 cut(s) 3194, 5108
AloI GAACNNNNNNTCC 2 cut(s) 4218, 4250
Alw21I GWGCWC 5 cut(s) 270, 567, 1989, 2683, 4220
Alw26I GTCTC 8 cut(s) 593, 631, 791, 1097, 2304, 2586, 5036, 5261
AlwI GGATC 9 cut(s) 1644, 2478, 2910, 3040, 3233, 3364, 3404, 4767, 5234
AlwNI CAGNNNCTG 3 cut(s) 2398, 3620, 3747
Ama87I CYCGRG 4 cut(s) 335, 524, 596, 4497
Aor13HI TCCGGA 1 cut(s) 165
ApoI RAATTY 9 cut(s) 1204, 2221, 2313, 2420, 3185, 3356, 3538, 3551, 5139
ArsI GACNNNNNNTTYG 2 cut(s) 3497, 3529
Asp700I GAANNNNTTC 1 cut(s) 2760
AsuC2I CCSGG 2 cut(s) 119, 1387
AvaI CYCGRG 4 cut(s) 335, 524, 596, 4497
AvaII GGWCC 8 cut(s) 160, 274, 574, 765, 2439, 3410, 4384, 4708
BaeGI GKGCMC 1 cut(s) 2980
BaeI ACNNNNGTAYC 4 cut(s) 4494, 4527, 5109, 5142
BanI GGYRCC 1 cut(s) 710
BanII GRGCYC 5 cut(s) 567, 1198, 1989, 4220, 4900
BbsI GAAGAC 2 cut(s) 860, 1889
Bbv12I GWGCWC 5 cut(s) 270, 567, 1989, 2683, 4220
BbvCI CCTCAGC 3 cut(s) 1730, 1847, 3249
BceAI ACGGC 5 cut(s) 137, 160, 407, 999, 2020
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BciVI GTATCC 3 cut(s) 984, 5110, 5282
BclI TGATCA 2 cut(s) 2104, 3361
BcnI CCSGG 2 cut(s) 119, 1387
BcoDI GTCTC 8 cut(s) 593, 631, 791, 1097, 2304, 2586, 5036, 5261
BfaI CTAG 6 cut(s) 1755, 2589, 3930, 4181, 4940, 5001
BfmI CTRYAG 4 cut(s) 1640, 2804, 2971, 5096
BfoI RGCGCY 2 cut(s) 479, 2149
BfuAI ACCTGC 1 cut(s) 492
BfuI GTATCC 3 cut(s) 984, 5110, 5282
BglI GCCNNNNNGGC 2 cut(s) 137, 3140
BglII AGATCT 3 cut(s) 1960, 3387, 3903
BmcAI AGTACT 1 cut(s) 758
Bme18I GGWCC 8 cut(s) 160, 274, 574, 765, 2439, 3410, 4384, 4708
BmeT110I CYCGRG 4 cut(s) 335, 524, 596, 4497
BmgBI CACGTC 2 cut(s) 1003, 4373
BmiI GGNNCC 9 cut(s) 161, 257, 712, 2930, 3412, 4082, 4309, 4566, 5175
BmrI ACTGGG 3 cut(s) 867, 2606, 4734
BmuI ACTGGG 3 cut(s) 867, 2606, 4734
BpiI GAAGAC 2 cut(s) 860, 1889
BplI GAGNNNNNCTC 4 cut(s) 505, 537, 3326, 3358
BpmI CTGGAG 5 cut(s) 290, 3566, 4671, 5012, 5243
Bpu10I CCTNAGC 7 cut(s) 1730, 1736, 1803, 1847, 3231, 3249, 3651
BpuEI CTTGAG 4 cut(s) 2003, 4516, 5011, 5061
BpuMI CCSGG 2 cut(s) 119, 1387
Bsa29I ATCGAT 1 cut(s) 3970
BsaAI YACGTR 5 cut(s) 472, 1371, 2289, 3192, 4805
BsaBI GATNNNNATC 1 cut(s) 3966
BsaHI GRCGYC 3 cut(s) 330, 345, 2566
BsaI GGTCTC 1 cut(s) 5261
BsaWI WCCGGW 4 cut(s) 165, 503, 629, 1612
Bse118I RCCGGY 3 cut(s) 22, 341, 4935
Bse1I ACTGG 9 cut(s) 218, 862, 2612, 3135, 4372, 4729, 4780, 5056, 5284
Bse3DI GCAATG 4 cut(s) 1760, 2637, 3171, 3850
Bse8I GATNNNNATC 1 cut(s) 3966
BseAI TCCGGA 1 cut(s) 165
BseCI ATCGAT 1 cut(s) 3970
BseJI GATNNNNATC 1 cut(s) 3966
BseMI GCAATG 4 cut(s) 1760, 2637, 3171, 3850
BseNI ACTGG 9 cut(s) 218, 862, 2612, 3135, 4372, 4729, 4780, 5056, 5284
BsePI GCGCGC 1 cut(s) 31
BseRI GAGGAG 4 cut(s) 80, 1799, 3266, 3533
BseSI GKGCMC 1 cut(s) 2980
BseX3I CGGCCG 2 cut(s) 138, 406
BseYI CCCAGC 3 cut(s) 1073, 4680, 5055
BsgI GTGCAG 1 cut(s) 1025
Bsh1285I CGRYCG 2 cut(s) 141, 409
BshNI GGYRCC 1 cut(s) 710
BshVI ATCGAT 1 cut(s) 3970
BsiEI CGRYCG 2 cut(s) 141, 409
BsiHKAI GWGCWC 5 cut(s) 270, 567, 1989, 2683, 4220
BsiHKCI CYCGRG 4 cut(s) 335, 524, 596, 4497
BslFI GGGAC 8 cut(s) 173, 602, 1013, 1090, 1591, 2594, 3396, 4265
BsmAI GTCTC 8 cut(s) 593, 631, 791, 1097, 2304, 2586, 5036, 5261
BsmBI CGTCTC 1 cut(s) 593
BsmFI GGGAC 8 cut(s) 173, 602, 1013, 1090, 1591, 2594, 3396, 4265
BsmI GAATGC 3 cut(s) 3717, 5039, 5243
Bso31I GGTCTC 1 cut(s) 5261
BsoBI CYCGRG 4 cut(s) 335, 524, 596, 4497
Bsp1286I GDGCHC 8 cut(s) 270, 567, 1198, 1989, 2683, 2980, 4220, 4900
Bsp13I TCCGGA 1 cut(s) 165
Bsp1407I TGTACA 2 cut(s) 2850, 3088
Bsp19I CCATGG 3 cut(s) 3921, 4302, 4813
BspDI ATCGAT 1 cut(s) 3970
BspEI TCCGGA 1 cut(s) 165
BspHI TCATGA 3 cut(s) 1530, 1938, 2664
BspLI GGNNCC 9 cut(s) 161, 257, 712, 2930, 3412, 4082, 4309, 4566, 5175
BspMAI CTGCAG 3 cut(s) 1644, 2808, 5100
BspMI ACCTGC 1 cut(s) 492
BspPI GGATC 9 cut(s) 1644, 2478, 2910, 3040, 3233, 3364, 3404, 4767, 5234
BspT107I GGYRCC 1 cut(s) 710
BspTNI GGTCTC 1 cut(s) 5261
BsrDI GCAATG 4 cut(s) 1760, 2637, 3171, 3850
BsrFI RCCGGY 3 cut(s) 22, 341, 4935
BsrGI TGTACA 2 cut(s) 2850, 3088
BsrI ACTGG 9 cut(s) 218, 862, 2612, 3135, 4372, 4729, 4780, 5056, 5284
BssAI RCCGGY 3 cut(s) 22, 341, 4935
BssHII GCGCGC 1 cut(s) 31
BssNI GRCGYC 3 cut(s) 330, 345, 2566
BssT1I CCWWGG 7 cut(s) 185, 1316, 2426, 3921, 4302, 4813, 5130
Bst6I CTCTTC 4 cut(s) 644, 1332, 2766, 2861
BstACI GRCGYC 3 cut(s) 330, 345, 2566
BstAPI GCANNNNNTGC 1 cut(s) 19
BstAUI TGTACA 2 cut(s) 2850, 3088
BstBAI YACGTR 5 cut(s) 472, 1371, 2289, 3192, 4805
BstDSI CCRYGG 5 cut(s) 132, 977, 3921, 4302, 4813
BstEII GGTNACC 3 cut(s) 506, 3722, 5196
BstENI CCTNNNNNAGG 2 cut(s) 581, 2551
BstH2I RGCGCY 2 cut(s) 479, 2149
BstMAI GTCTC 8 cut(s) 593, 631, 791, 1097, 2304, 2586, 5036, 5261
BstMCI CGRYCG 2 cut(s) 141, 409
BstNSI RCATGY 1 cut(s) 1565
BstPI GGTNACC 3 cut(s) 506, 3722, 5196
BstSFI CTRYAG 4 cut(s) 1640, 2804, 2971, 5096
BstSLI GKGCMC 1 cut(s) 2980
BstSNI TACGTA 2 cut(s) 2289, 4805
BstV2I GAAGAC 2 cut(s) 860, 1889
BstXI CCANNNNNNTGG 3 cut(s) 3167, 3215, 4325
BstZI CGGCCG 2 cut(s) 138, 406
Bsu15I ATCGAT 1 cut(s) 3970
BsuI GTATCC 3 cut(s) 984, 5110, 5282
BsuTUI ATCGAT 1 cut(s) 3970
BtgI CCRYGG 5 cut(s) 132, 977, 3921, 4302, 4813
BtgZI GCGATG 1 cut(s) 1845
BtrI CACGTC 2 cut(s) 1003, 4373
BtsI GCAGTG 2 cut(s) 1068, 3830
BveI ACCTGC 1 cut(s) 492
CaiI CAGNNNCTG 3 cut(s) 2398, 3620, 3747
CciI TCATGA 3 cut(s) 1530, 1938, 2664
CciNI GCGGCCGC 1 cut(s) 138
Cfr10I RCCGGY 3 cut(s) 22, 341, 4935
Cfr42I CCGCGG 1 cut(s) 135
ClaI ATCGAT 1 cut(s) 3970
CseI GACGC 1 cut(s) 334
CsiI ACCWGGT 2 cut(s) 270, 1910
EaeI YGGCCR 4 cut(s) 24, 138, 406, 2033
EagI CGGCCG 2 cut(s) 138, 406
Eam1104I CTCTTC 4 cut(s) 644, 1332, 2766, 2861
EarI CTCTTC 4 cut(s) 644, 1332, 2766, 2861
EciI GGCGGA 4 cut(s) 303, 341, 350, 443
Ecl136II GAGCTC 3 cut(s) 565, 1987, 4218
EclXI CGGCCG 2 cut(s) 138, 406
Eco105I TACGTA 2 cut(s) 2289, 4805
Eco130I CCWWGG 7 cut(s) 185, 1316, 2426, 3921, 4302, 4813, 5130
Eco147I AGGCCT 2 cut(s) 62, 2466
Eco24I GRGCYC 5 cut(s) 567, 1198, 1989, 4220, 4900
Eco31I GGTCTC 1 cut(s) 5261
Eco32I GATATC 3 cut(s) 748, 3607, 5265
Eco47I GGWCC 8 cut(s) 160, 274, 574, 765, 2439, 3410, 4384, 4708
Eco52I CGGCCG 2 cut(s) 138, 406
Eco53kI GAGCTC 3 cut(s) 565, 1987, 4218
Eco57I CTGAAG 7 cut(s) 1040, 1248, 1478, 2511, 3002, 3437, 4266
Eco88I CYCGRG 4 cut(s) 335, 524, 596, 4497
Eco91I GGTNACC 3 cut(s) 506, 3722, 5196
EcoICRI GAGCTC 3 cut(s) 565, 1987, 4218
EcoNI CCTNNNNNAGG 2 cut(s) 581, 2551
EcoO109I RGGNCCY 4 cut(s) 160, 574, 2395, 3283
EcoO65I GGTNACC 3 cut(s) 506, 3722, 5196
EcoRI GAATTC 3 cut(s) 1204, 2420, 3551
EcoRV GATATC 3 cut(s) 748, 3607, 5265
EcoT14I CCWWGG 7 cut(s) 185, 1316, 2426, 3921, 4302, 4813, 5130
EcoT22I ATGCAT 1 cut(s) 1563
EcoT38I GRGCYC 5 cut(s) 567, 1198, 1989, 4220, 4900
ErhI CCWWGG 7 cut(s) 185, 1316, 2426, 3921, 4302, 4813, 5130
Esp3I CGTCTC 1 cut(s) 593
FalI AAGNNNNNCTT 6 cut(s) 930, 962, 2487, 2519, 2745, 2777
FaqI GGGAC 8 cut(s) 173, 602, 1013, 1090, 1591, 2594, 3396, 4265
FauI CCCGC 3 cut(s) 255, 1177, 3753
FauNDI CATATG 1 cut(s) 552
FbaI TGATCA 2 cut(s) 2104, 3361
FriOI GRGCYC 5 cut(s) 567, 1198, 1989, 4220, 4900
FspBI CTAG 6 cut(s) 1755, 2589, 3930, 4181, 4940, 5001
GsaI CCCAGC 3 cut(s) 1077, 4684, 5059
GsuI CTGGAG 5 cut(s) 290, 3566, 4671, 5012, 5243
HaeII RGCGCY 2 cut(s) 479, 2149
HgaI GACGC 1 cut(s) 334
Hin1I GRCGYC 3 cut(s) 330, 345, 2566
HincII GTYRAC 2 cut(s) 1020, 1513
HindII GTYRAC 2 cut(s) 1020, 1513
HindIII AAGCTT 1 cut(s) 2163
HpaI GTTAAC 1 cut(s) 1513
Hpy99I CGWCG 5 cut(s) 158, 332, 428, 438, 2568
Hsp92I GRCGYC 3 cut(s) 330, 345, 2566
Kpn2I TCCGGA 1 cut(s) 165
KroI GCCGGC 2 cut(s) 22, 341
KroNI GCCGGC 2 cut(s) 24, 343
Ksp22I TGATCA 2 cut(s) 2104, 3361
KspAI GTTAAC 1 cut(s) 1513
KspI CCGCGG 1 cut(s) 135
MabI ACCWGGT 2 cut(s) 270, 1910
MaeI CTAG 6 cut(s) 1755, 2589, 3930, 4181, 4940, 5001
MfeI CAATTG 4 cut(s) 1683, 3489, 3823, 4446
MhlI GDGCHC 8 cut(s) 270, 567, 1198, 1989, 2683, 2980, 4220, 4900
MlyI GAGTC 8 cut(s) 509, 793, 1072, 1519, 2588, 2713, 3844, 4410
Mph1103I ATGCAT 1 cut(s) 1563
MroI TCCGGA 1 cut(s) 165
MroNI GCCGGC 2 cut(s) 22, 341
MroXI GAANNNNTTC 1 cut(s) 2760
MslI CAYNNNNRTG 9 cut(s) 2669, 3165, 3176, 3194, 3729, 4075, 4347, 4520, 5108
MspA1I CMGCKG 4 cut(s) 134, 262, 1729, 3760
MunI CAATTG 4 cut(s) 1683, 3489, 3823, 4446
Mva1269I GAATGC 3 cut(s) 3717, 5039, 5243
NaeI GCCGGC 2 cut(s) 24, 343
NciI CCSGG 2 cut(s) 119, 1387
NcoI CCATGG 3 cut(s) 3921, 4302, 4813
NdeI CATATG 1 cut(s) 552
NgoMIV GCCGGC 2 cut(s) 22, 341
NlaIV GGNNCC 9 cut(s) 161, 257, 712, 2930, 3412, 4082, 4309, 4566, 5175
NmeAIII GCCGAG 2 cut(s) 384, 704
NmuCI GTSAC 5 cut(s) 1093, 2870, 3667, 3722, 3847
NotI GCGGCCGC 1 cut(s) 138
NsiI ATGCAT 1 cut(s) 1563
NspI RCATGY 1 cut(s) 1565
OliI CACNNNNGTG 2 cut(s) 3194, 5108
PaeR7I CTCGAG 2 cut(s) 335, 4497
PagI TCATGA 3 cut(s) 1530, 1938, 2664
PauI GCGCGC 1 cut(s) 31
PceI AGGCCT 2 cut(s) 62, 2466
PcsI WCGNNNNNNNCGW 1 cut(s) 342
PctI GAATGC 3 cut(s) 3717, 5039, 5243
PdiI GCCGGC 2 cut(s) 24, 343
PdmI GAANNNNTTC 1 cut(s) 2760
PflFI GACNNNGTC 1 cut(s) 1866
PflMI CCANNNNNTGG 2 cut(s) 553, 4893
PfoI TCCNGGA 1 cut(s) 767
PleI GAGTC 8 cut(s) 508, 792, 1072, 1519, 2588, 2713, 3844, 4410
PpsI GAGTC 8 cut(s) 508, 792, 1072, 1519, 2588, 2713, 3844, 4410
Ppu21I YACGTR 5 cut(s) 472, 1371, 2289, 3192, 4805
PpuMI RGGWCCY 2 cut(s) 160, 574
PsiI TTATAA 1 cut(s) 4631
Psp124BI GAGCTC 3 cut(s) 567, 1989, 4220
Psp1406I AACGTT 1 cut(s) 249
Psp5II RGGWCCY 2 cut(s) 160, 574
PspEI GGTNACC 3 cut(s) 506, 3722, 5196
PspFI CCCAGC 3 cut(s) 1073, 4680, 5055
PspN4I GGNNCC 9 cut(s) 161, 257, 712, 2930, 3412, 4082, 4309, 4566, 5175
PspPPI RGGWCCY 2 cut(s) 160, 574
PspXI VCTCGAGB 1 cut(s) 335
PstI CTGCAG 3 cut(s) 1644, 2808, 5100
PstNI CAGNNNCTG 3 cut(s) 2398, 3620, 3747
PsyI GACNNNGTC 1 cut(s) 1866
PteI GCGCGC 1 cut(s) 31
PvuII CAGCTG 1 cut(s) 1729
RseI CAYNNNNRTG 9 cut(s) 2669, 3165, 3176, 3194, 3729, 4075, 4347, 4520, 5108
SacI GAGCTC 3 cut(s) 567, 1989, 4220
SacII CCGCGG 1 cut(s) 135
ScaI AGTACT 1 cut(s) 758
SchI GAGTC 8 cut(s) 509, 793, 1072, 1519, 2588, 2713, 3844, 4410
SduI GDGCHC 8 cut(s) 270, 567, 1198, 1989, 2683, 2980, 4220, 4900
SexAI ACCWGGT 2 cut(s) 270, 1910
SfcI CTRYAG 4 cut(s) 1640, 2804, 2971, 5096
Sfr274I CTCGAG 2 cut(s) 335, 4497
Sfr303I CCGCGG 1 cut(s) 135
SgrBI CCGCGG 1 cut(s) 135
SinI GGWCC 8 cut(s) 160, 274, 574, 765, 2439, 3410, 4384, 4708
SlaI CTCGAG 2 cut(s) 335, 4497
SmiMI CAYNNNNRTG 9 cut(s) 2669, 3165, 3176, 3194, 3729, 4075, 4347, 4520, 5108
SmlI CTYRAG 6 cut(s) 335, 1982, 4497, 4531, 5026, 5076
SmoI CTYRAG 6 cut(s) 335, 1982, 4497, 4531, 5026, 5076
SnaBI TACGTA 2 cut(s) 2289, 4805
SseBI AGGCCT 2 cut(s) 62, 2466
SspI AATATT 1 cut(s) 2620
SspMI CTAG 6 cut(s) 1755, 2589, 3930, 4181, 4940, 5001
SstI GAGCTC 3 cut(s) 567, 1989, 4220
StuI AGGCCT 2 cut(s) 62, 2466
StyI CCWWGG 7 cut(s) 185, 1316, 2426, 3921, 4302, 4813, 5130
TatI WGTACW 6 cut(s) 756, 824, 1264, 2850, 2964, 3088
TseFI GTSAC 5 cut(s) 1093, 2870, 3667, 3722, 3847
Tsp45I GTSAC 5 cut(s) 1093, 2870, 3667, 3722, 3847
TspGWI ACGGA 5 cut(s) 966, 2099, 2860, 3095, 3587
Tth111I GACNNNGTC 1 cut(s) 1866
Van91I CCANNNNNTGG 2 cut(s) 553, 4893
VpaK11BI GGWCC 8 cut(s) 160, 274, 574, 765, 2439, 3410, 4384, 4708
XagI CCTNNNNNAGG 2 cut(s) 581, 2551
XapI RAATTY 9 cut(s) 1204, 2221, 2313, 2420, 3185, 3356, 3538, 3551, 5139
XbaI TCTAGA 1 cut(s) 2588
XceI RCATGY 1 cut(s) 1565
XcmI CCANNNNNNNNNTGG 1 cut(s) 2007
XhoI CTCGAG 2 cut(s) 335, 4497
XmnI GAANNNNTTC 1 cut(s) 2760
XspI CTAG 6 cut(s) 1755, 2589, 3930, 4181, 4940, 5001
ZraI GACGTC 2 cut(s) 331, 2567
ZrmI AGTACT 1 cut(s) 758
Zsp2I ATGCAT 1 cut(s) 1563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.