Rroxscaffold_1G00057790

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000477
Physical Location & Seq
Reverse (-)
79791471 .. 79796051
4581 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00057790.1

Sequence Viewer

Length: 2022 bp
ATGGCTACTGATGAAGGCACTGATAACAAATTAGGAAGGGTGTGGGTTTTGGATCAGCAGTTTGATCAACCCATGGATGAAGAAGCTAAGAAGCTTAGAAATCCATATAATGAAAAAAGAAATTATATATATGGATTTGTGCAAATTCCAGAGGCTATTAATCCTTTAGATGGAGGCAGATCTTTGTTCTTGATTGTGTCTTTTTCATACTATATGAAATTTTCAACATTAATGGTTATGCAGCTTGCATTTCAAAGCCTCGGTGTGGTCTATGGTGATTTAGGCACATCTCCTCTCTATGTGTTCTACAATACATTTCCTAATGGAATTAGTGACCCGGAGGATTTAGTTGGAGCTTTATCTGTCATCATATATTCCCTCACTCTAATTCCCCTCCTGAAGTATGTTTTTATTGTCTGTAGAGCAAATGACAACGGTCAAGGTGGAACATTTGCTCTTTATTCATTACTCTGTCGATATGCAAACATAAAGGCTATTCCGAACCAAGACCAAACAGATGAGACTGTAACAACATATAGTAATTCCACATTTGGGGAGCAATCGTTTGCTGCACGAACCAAGAGATGGTTGGAGGGACAAGCAATATTGAAGAACACTCTTCTAATTCTTGTTCTAGTTGGTTCCAGCATGGTGATTGGGGATGGGATTCTGACTCCAGCCATATCAGTTCTGTCAGCAGTTGGTGGGATCAATGTGCGCCACTCTGAGATCAGTAATGATTTAGTTGTGTTTGTTGCTGTTGTTATCCTGGTACTACTGTTTACAGTGCAACACCATGGAACAGAAGCACTCTTTGCTGACCTGTCCCATTTTCCAGTCCTGTCAATACAGATAGCTTTCACATCAGTTGTATTTCCTTGCCTTCTTTTAGCATACTCTGGTCAGGCTGCCTACCTCATGAAGAATTCTGATAATGTGTTCAACACTTTTTACCATTCTATTCCAGGGACGGCGGTTTGTATAGTCATGTTGGTAACCACATTGCTTATGATTTTGGTCATGATATTGGTCTGGCGCTGCCATTTGATTCTTGTCCTCCTCTTCACTGGTTTATCACTACTAATAGAGGGCACTTACTTCTCTGCTGTACTCCTCAAGGTCAATCAAGGTGGCTGGGTTCCTCTTGTGATCTCAGCAGCCTTCTTTATTGTTATGTATGCTTGGCATTATGGTACAGTAAAACGTTACGAGATTGAAGTCCACAGTAAGGTCTCGATGGCATGGATTCTCGGACTTGGTCCCAGTTTAGGATTGGTTCGTGTACCTGGGATAGGCCTTGTGTACACTGAGCTAGCAAGTGGAGTGCCTCGCATCTTTTCTCACTTGATCACCAACCTACCCGCCATCCATAATGTTGTTGTCTTTGTCTGTGTGAAGTACCTTCCTGTCTACACAGTCCAAGAAGAAGAAAGGTTCCTTGTAAAGCGGATTGGCCCAAAGAATTTCCACATGTTTCGCTGCGTTGCAAGATATGGCTATAAAGACATCCACACAAAAGATGACGATTTTGAGAAAAAACTCTTTGCCAGTCTTTTCTTGTTTCTCCTGGTAGAGTCATTGGCAGAACCATCTTCTGGCTCTGATATATCTAGTTTACTTGGTCAGCAAACTAGACAATCAAGAAGTAGCACGTTCAATAGTATCAGCAACATACCTTACTCCACCGCAGACCTGTCAATTCAGTCGAGTGACTCAATCGTGCCGGCTGGTTCTCCACTTCATGAAAACAACACTTTGACATCCTCTGATATTCAGCCAAGCAGCCAGGTGGTCGAAGACGAGATTGATGAGACTGAGTTCTTGAACAACTGTAGAGATGTAGGGGTGGTGCACATACTTGGAAACACTGTAGTGAGAGCTAGCCGGAACTCAAACTTTTGGAAGAGAATAACTATTGATTACCTATATGCATTTCTTAGGAAGATATGTTGGGGAAACAGTGTAATGCTTAATGTTCCTCATGAGAGTCTCTTGAACGTTGGGCAGGTATTATATGTATGA

Protein Analysis

673

Amino Acids

74.89

Weight (kDa)

5.94

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 82 - 269 4.3e-50 K+ potassium transporter integral membrane domain
K_trans PF02705 267 - 322 3.6e-15 K+ potassium transporter integral membrane domain
K_trans PF02705 323 - 416 3.3e-19 K+ potassium transporter integral membrane domain
K_trans_C PF22776 429 - 670 7.1e-22 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1996
AccB7I CCANNNNNTGG 2 cut(s) 585, 1595
AccI GTMKAC 1 cut(s) 1410
AciI CCGC 4 cut(s) 974, 1362, 1447, 1686
AclI AACGTT 2 cut(s) 1204, 1998
AclWI GGATC 2 cut(s) 60, 716
AcsI RAATTY 4 cut(s) 144, 218, 925, 1462
AcuI CTGAAG 1 cut(s) 419
AfaI GTAC 6 cut(s) 774, 1110, 1195, 1284, 1304, 1400
AfiI CCNNNNNNNGG 8 cut(s) 170, 265, 552, 585, 1228, 1268, 1292, 1595
AflIII ACRYGT 1 cut(s) 1470
AgsI TTSAA 8 cut(s) 225, 254, 610, 943, 1217, 1657, 1825, 1996
AjnI CCWGG 5 cut(s) 768, 964, 1285, 1566, 1785
AleI CACNNNNGTG 1 cut(s) 1871
AluBI AGCT 7 cut(s) 86, 94, 244, 356, 857, 1312, 1880
AluI AGCT 7 cut(s) 86, 94, 244, 356, 857, 1312, 1880
Alw21I GWGCWC 1 cut(s) 1854
Alw26I GTCTC 4 cut(s) 515, 1237, 1805, 1994
Alw44I GTGCAC 1 cut(s) 1850
AlwI GGATC 2 cut(s) 60, 716
AoxI GGCC 2 cut(s) 1294, 1453
ApaLI GTGCAC 1 cut(s) 1850
ApeKI GCWGC 7 cut(s) 241, 569, 908, 1038, 1157, 1479, 1782
ApoI RAATTY 4 cut(s) 144, 218, 925, 1462
AseI ATTAAT 2 cut(s) 159, 230
AspLEI GCGC 2 cut(s) 720, 1038
AspS9I GGNCC 2 cut(s) 1259, 1454
AsuC2I CCSGG 1 cut(s) 338
AsuHPI GGTGA 3 cut(s) 287, 664, 1342
AsuNHI GCTAGC 2 cut(s) 1312, 1880
AvaII GGWCC 1 cut(s) 1259
BaeGI GKGCMC 2 cut(s) 1094, 1854
BaeI ACNNNNGTAYC 2 cut(s) 764, 797
BbsI GAAGAC 1 cut(s) 1803
Bbv12I GWGCWC 1 cut(s) 1854
BbvI GCAGC 7 cut(s) 253, 556, 895, 1025, 1169, 1466, 1794
BccI CCATC 6 cut(s) 164, 579, 656, 1231, 1373, 1597
BceAI ACGGC 1 cut(s) 987
BciT130I CCWGG 5 cut(s) 770, 966, 1287, 1568, 1787
BclI TGATCA 2 cut(s) 64, 1347
BcnI CCSGG 1 cut(s) 338
BcoDI GTCTC 4 cut(s) 515, 1237, 1805, 1994
BfaI CTAG 5 cut(s) 635, 1313, 1611, 1632, 1881
BfmI CTRYAG 3 cut(s) 418, 1831, 1869
BfoI RGCGCY 1 cut(s) 1039
BfuAI ACCTGC 1 cut(s) 1996
BglII AGATCT 1 cut(s) 179
BisI GCNGC 7 cut(s) 242, 570, 909, 1039, 1158, 1480, 1783
BlsI GCNGC 7 cut(s) 243, 571, 910, 1040, 1159, 1481, 1784
Bme1390I CCNGG 6 cut(s) 338, 770, 966, 1287, 1568, 1787
Bme18I GGWCC 1 cut(s) 1259
BmgT120I GGNCC 2 cut(s) 1259, 1454
BmiI GGNNCC 4 cut(s) 643, 1140, 1261, 1436
BmrFI CCNGG 6 cut(s) 338, 770, 966, 1287, 1568, 1787
BmrI ACTGGG 1 cut(s) 1257
BmsI GCATC 1 cut(s) 1341
BmtI GCTAGC 2 cut(s) 1316, 1884
BmuI ACTGGG 1 cut(s) 1257
BoxI GACNNNNGTC 1 cut(s) 435
BpiI GAAGAC 1 cut(s) 1803
BpmI CTGGAG 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 1100
BpuMI CCSGG 1 cut(s) 338
BsaI GGTCTC 1 cut(s) 1237
BsaJI CCNNGG 5 cut(s) 72, 259, 796, 965, 1286
BsaXI ACNNNNNCTCC 2 cut(s) 548, 578
Bsc4I CCNNNNNNNGG 8 cut(s) 170, 265, 552, 585, 1228, 1268, 1292, 1595
Bse118I RCCGGY 1 cut(s) 1723
Bse1I ACTGG 4 cut(s) 836, 1072, 1263, 1548
Bse3DI GCAATG 1 cut(s) 1001
BseBI CCWGG 5 cut(s) 770, 966, 1287, 1568, 1787
BseDI CCNNGG 5 cut(s) 72, 259, 796, 965, 1286
BseGI GGATG 5 cut(s) 82, 667, 1365, 1506, 1760
BseLI CCNNNNNNNGG 8 cut(s) 170, 265, 552, 585, 1228, 1268, 1292, 1595
BseMI GCAATG 1 cut(s) 1001
BseMII CTCAG 4 cut(s) 717, 1167, 1299, 1806
BseNI ACTGG 4 cut(s) 836, 1072, 1263, 1548
BseRI GAGGAG 3 cut(s) 282, 1049, 1103
BseSI GKGCMC 2 cut(s) 1094, 1854
BseXI GCAGC 7 cut(s) 253, 556, 895, 1025, 1169, 1466, 1794
BseYI CCCAGC 1 cut(s) 1134
BsgI GTGCAG 1 cut(s) 555
BshFI GGCC 2 cut(s) 1296, 1455
BsiHKAI GWGCWC 1 cut(s) 1854
BsiSI CCGG 3 cut(s) 338, 1724, 1885
BslFI GGGAC 4 cut(s) 609, 811, 982, 1245
BslI CCNNNNNNNGG 8 cut(s) 170, 265, 552, 585, 1228, 1268, 1292, 1595
BsmAI GTCTC 4 cut(s) 515, 1237, 1805, 1994
BsmFI GGGAC 4 cut(s) 609, 811, 982, 1245
BsnI GGCC 2 cut(s) 1296, 1455
Bso31I GGTCTC 1 cut(s) 1237
Bsp1286I GDGCHC 2 cut(s) 1094, 1854
Bsp1407I TGTACA 1 cut(s) 1302
Bsp143I GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
Bsp19I CCATGG 2 cut(s) 72, 796
BspACI CCGC 4 cut(s) 974, 1362, 1447, 1686
BspANI GGCC 2 cut(s) 1296, 1455
BspCNI CTCAG 4 cut(s) 718, 1166, 1300, 1807
BspHI TCATGA 4 cut(s) 918, 1020, 1741, 1981
BspLI GGNNCC 4 cut(s) 643, 1140, 1261, 1436
BspMI ACCTGC 1 cut(s) 1996
BspOI GCTAGC 2 cut(s) 1316, 1884
BspPI GGATC 2 cut(s) 60, 716
BspTNI GGTCTC 1 cut(s) 1237
BsrDI GCAATG 1 cut(s) 1001
BsrFI RCCGGY 1 cut(s) 1723
BsrGI TGTACA 1 cut(s) 1302
BsrI ACTGG 4 cut(s) 836, 1072, 1263, 1548
BssAI RCCGGY 1 cut(s) 1723
BssECI CCNNGG 5 cut(s) 72, 259, 796, 965, 1286
BssMI GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
BssT1I CCWWGG 2 cut(s) 72, 796
Bst2UI CCWGG 5 cut(s) 770, 966, 1287, 1568, 1787
Bst6I CTCTTC 3 cut(s) 624, 1067, 1898
BstAPI GCANNNNNTGC 1 cut(s) 815
BstAUI TGTACA 1 cut(s) 1302
BstC8I GCNNGC 4 cut(s) 246, 1314, 1725, 1882
BstDEI CTNAG 7 cut(s) 87, 95, 726, 1153, 1308, 1815, 1937
BstDSI CCRYGG 2 cut(s) 72, 796
BstEII GGTNACC 1 cut(s) 994
BstENI CCTNNNNNAGG 1 cut(s) 1290
BstF5I GGATG 5 cut(s) 82, 667, 1365, 1506, 1760
BstH2I RGCGCY 1 cut(s) 1039
BstHHI GCGC 2 cut(s) 720, 1038
BstKTI GATC 7 cut(s) 55, 67, 182, 711, 732, 1152, 1350
BstMAI GTCTC 4 cut(s) 515, 1237, 1805, 1994
BstMBI GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
BstMWI GCNNNNNNNGC 1 cut(s) 815
BstNI CCWGG 5 cut(s) 770, 966, 1287, 1568, 1787
BstNSI RCATGY 1 cut(s) 1474
BstPAI GACNNNNGTC 1 cut(s) 435
BstPI GGTNACC 1 cut(s) 994
BstSCI CCNGG 6 cut(s) 336, 768, 964, 1285, 1566, 1785
BstSFI CTRYAG 3 cut(s) 418, 1831, 1869
BstSLI GKGCMC 2 cut(s) 1094, 1854
BstV1I GCAGC 7 cut(s) 253, 556, 895, 1025, 1169, 1466, 1794
BstV2I GAAGAC 1 cut(s) 1803
BstX2I RGATCY 1 cut(s) 179
BstYI RGATCY 1 cut(s) 179
BsuRI GGCC 2 cut(s) 1296, 1455
BtgI CCRYGG 2 cut(s) 72, 796
BtsCI GGATG 5 cut(s) 82, 667, 1365, 1506, 1760
BtsIMutI CAGTG 6 cut(s) 18, 792, 1065, 1305, 1866, 1966
BveI ACCTGC 1 cut(s) 1996
Cac8I GCNNGC 4 cut(s) 246, 1314, 1725, 1882
CciI TCATGA 4 cut(s) 918, 1020, 1741, 1981
CfoI GCGC 2 cut(s) 720, 1038
Cfr10I RCCGGY 1 cut(s) 1723
Cfr13I GGNCC 2 cut(s) 1259, 1454
Csp6I GTAC 6 cut(s) 773, 1109, 1194, 1283, 1303, 1399
CspCI CAANNNNNGTGG 2 cut(s) 1111, 1146
CviQI GTAC 6 cut(s) 773, 1109, 1194, 1283, 1303, 1399
DdeI CTNAG 7 cut(s) 87, 95, 726, 1153, 1308, 1815, 1937
DpnI GATC 7 cut(s) 54, 66, 181, 710, 731, 1151, 1349
DpnII GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
Eam1104I CTCTTC 3 cut(s) 624, 1067, 1898
EarI CTCTTC 3 cut(s) 624, 1067, 1898
Eco130I CCWWGG 2 cut(s) 72, 796
Eco147I AGGCCT 1 cut(s) 1296
Eco31I GGTCTC 1 cut(s) 1237
Eco47I GGWCC 1 cut(s) 1259
Eco57I CTGAAG 1 cut(s) 419
Eco91I GGTNACC 1 cut(s) 994
EcoNI CCTNNNNNAGG 1 cut(s) 1290
EcoO65I GGTNACC 1 cut(s) 994
EcoRI GAATTC 1 cut(s) 925
EcoRII CCWGG 5 cut(s) 768, 964, 1285, 1566, 1785
EcoT14I CCWWGG 2 cut(s) 72, 796
EcoT22I ATGCAT 1 cut(s) 1933
ErhI CCWWGG 2 cut(s) 72, 796
FaqI GGGAC 4 cut(s) 609, 811, 982, 1245
FauI CCCGC 1 cut(s) 1369
FbaI TGATCA 2 cut(s) 64, 1347
FblI GTMKAC 1 cut(s) 1410
Fnu4HI GCNGC 7 cut(s) 242, 570, 909, 1039, 1158, 1480, 1783
FokI GGATG 5 cut(s) 89, 674, 1352, 1493, 1747
Fsp4HI GCNGC 7 cut(s) 242, 570, 909, 1039, 1158, 1480, 1783
FspBI CTAG 5 cut(s) 635, 1313, 1611, 1632, 1881
GlaI GCGC 2 cut(s) 719, 1037
GluI GCNGC 7 cut(s) 242, 570, 909, 1039, 1158, 1480, 1783
GsaI CCCAGC 1 cut(s) 1138
GsuI CTGGAG 1 cut(s) 660
HaeII RGCGCY 1 cut(s) 1039
HaeIII GGCC 2 cut(s) 1296, 1455
HapII CCGG 3 cut(s) 338, 1724, 1885
HhaI GCGC 2 cut(s) 720, 1038
Hin6I GCGC 2 cut(s) 718, 1036
HinP1I GCGC 2 cut(s) 718, 1036
HindIII AAGCTT 1 cut(s) 92
HinfI GANTC 7 cut(s) 667, 673, 1048, 1246, 1574, 1712, 1987
HpaII CCGG 3 cut(s) 338, 1724, 1885
HphI GGTGA 3 cut(s) 287, 664, 1342
Hpy166II GTNNAC 8 cut(s) 783, 1222, 1283, 1303, 1305, 1411, 1616, 1852
Hpy188I TCNGA 7 cut(s) 501, 672, 727, 931, 1253, 1603, 1768
Hpy8I GTNNAC 8 cut(s) 783, 1222, 1283, 1303, 1305, 1411, 1616, 1852
HpyAV CCTTC 5 cut(s) 8, 30, 893, 1171, 1412
HpyCH4IV ACGT 3 cut(s) 1204, 1652, 1998
HpyCH4V TGCA 9 cut(s) 142, 241, 248, 482, 572, 790, 1487, 1852, 1931
HpyF10VI GCNNNNNNNGC 1 cut(s) 815
HpyF3I CTNAG 7 cut(s) 87, 95, 726, 1153, 1308, 1815, 1937
HpySE526I ACGT 3 cut(s) 1204, 1652, 1998
HspAI GCGC 2 cut(s) 718, 1036
KroI GCCGGC 1 cut(s) 1723
KroNI GCCGGC 1 cut(s) 1725
Ksp22I TGATCA 2 cut(s) 64, 1347
Kzo9I GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
LmnI GCTCC 2 cut(s) 353, 556
Lsp1109I GCAGC 7 cut(s) 253, 556, 895, 1025, 1169, 1466, 1794
LweI GCATC 1 cut(s) 1341
MaeI CTAG 5 cut(s) 635, 1313, 1611, 1632, 1881
MaeII ACGT 3 cut(s) 1204, 1652, 1998
MaeIII GTNAC 5 cut(s) 332, 526, 994, 1205, 1709
MalI GATC 7 cut(s) 54, 66, 181, 710, 731, 1151, 1349
MboI GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 2 cut(s) 1094, 1854
MlyI GAGTC 4 cut(s) 667, 1583, 1706, 1996
MmeI TCCRAC 2 cut(s) 331, 570
Mph1103I ATGCAT 1 cut(s) 1933
MroNI GCCGGC 1 cut(s) 1723
MseI TTAA 3 cut(s) 159, 230, 1971
MslI CAYNNNNRTG 1 cut(s) 1871
MspI CCGG 3 cut(s) 338, 1724, 1885
MspR9I CCNGG 6 cut(s) 338, 770, 966, 1287, 1568, 1787
MvaI CCWGG 5 cut(s) 770, 966, 1287, 1568, 1787
MwoI GCNNNNNNNGC 1 cut(s) 815
NaeI GCCGGC 1 cut(s) 1725
NciI CCSGG 1 cut(s) 338
NcoI CCATGG 2 cut(s) 72, 796
NdeII GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
NgoMIV GCCGGC 1 cut(s) 1723
NheI GCTAGC 2 cut(s) 1312, 1880
NlaIV GGNNCC 4 cut(s) 643, 1140, 1261, 1436
NmuCI GTSAC 2 cut(s) 332, 1709
NsiI ATGCAT 1 cut(s) 1933
NspI RCATGY 1 cut(s) 1474
OliI CACNNNNGTG 1 cut(s) 1871
PagI TCATGA 4 cut(s) 918, 1020, 1741, 1981
PceI AGGCCT 1 cut(s) 1296
PciI ACATGT 1 cut(s) 1470
PdiI GCCGGC 1 cut(s) 1725
PfeI GAWTC 3 cut(s) 667, 1048, 1246
PflFI GACNNNGTC 1 cut(s) 1257
PflMI CCANNNNNTGG 2 cut(s) 585, 1595
PkrI GCNGC 7 cut(s) 243, 571, 910, 1040, 1159, 1481, 1784
PleI GAGTC 4 cut(s) 667, 1582, 1706, 1995
PpsI GAGTC 4 cut(s) 667, 1582, 1706, 1995
PscI ACATGT 1 cut(s) 1470
PshAI GACNNNNGTC 1 cut(s) 435
PshBI ATTAAT 2 cut(s) 159, 230
Psp1406I AACGTT 2 cut(s) 1204, 1998
Psp6I CCWGG 5 cut(s) 768, 964, 1285, 1566, 1785
PspEI GGTNACC 1 cut(s) 994
PspFI CCCAGC 1 cut(s) 1134
PspGI CCWGG 5 cut(s) 768, 964, 1285, 1566, 1785
PspN4I GGNNCC 4 cut(s) 643, 1140, 1261, 1436
PspPI GGNCC 2 cut(s) 1259, 1454
PsuI RGATCY 1 cut(s) 179
PsyI GACNNNGTC 1 cut(s) 1257
RsaI GTAC 6 cut(s) 774, 1110, 1195, 1284, 1304, 1400
RsaNI GTAC 6 cut(s) 773, 1109, 1194, 1283, 1303, 1399
RseI CAYNNNNRTG 1 cut(s) 1871
SaqAI TTAA 3 cut(s) 159, 230, 1971
SatI GCNGC 7 cut(s) 242, 570, 909, 1039, 1158, 1480, 1783
Sau3AI GATC 7 cut(s) 52, 64, 179, 708, 729, 1149, 1347
Sau96I GGNCC 2 cut(s) 1259, 1454
SchI GAGTC 4 cut(s) 667, 1583, 1706, 1996
ScrFI CCNGG 6 cut(s) 338, 770, 966, 1287, 1568, 1787
SduI GDGCHC 2 cut(s) 1094, 1854
SfaNI GCATC 1 cut(s) 1341
SfcI CTRYAG 3 cut(s) 418, 1831, 1869
SinI GGWCC 1 cut(s) 1259
SmiMI CAYNNNNRTG 1 cut(s) 1871
SmlI CTYRAG 1 cut(s) 1115
SmoI CTYRAG 1 cut(s) 1115
SseBI AGGCCT 1 cut(s) 1296
SsiI CCGC 4 cut(s) 974, 1362, 1447, 1686
SspI AATATT 1 cut(s) 606
SspMI CTAG 5 cut(s) 635, 1313, 1611, 1632, 1881
StuI AGGCCT 1 cut(s) 1296
StyD4I CCNGG 6 cut(s) 336, 768, 964, 1285, 1566, 1785
StyI CCWWGG 2 cut(s) 72, 796
TaiI ACGT 3 cut(s) 1207, 1655, 2001
TaqI TCGA 4 cut(s) 475, 1235, 1706, 1794
TatI WGTACW 2 cut(s) 1108, 1302
TfiI GAWTC 3 cut(s) 667, 1048, 1246
Tru1I TTAA 3 cut(s) 159, 230, 1971
Tru9I TTAA 3 cut(s) 159, 230, 1971
TscAI CASTG 6 cut(s) 25, 792, 1072, 1312, 1873, 1966
TseFI GTSAC 2 cut(s) 332, 1709
TseI GCWGC 7 cut(s) 241, 569, 908, 1038, 1157, 1479, 1782
Tsp45I GTSAC 2 cut(s) 332, 1709
TspDTI ATGAA 9 cut(s) 27, 93, 126, 195, 230, 453, 935, 1730, 1758
TspRI CASTG 6 cut(s) 25, 792, 1072, 1312, 1873, 1966
Tth111I GACNNNGTC 1 cut(s) 1257
Van91I CCANNNNNTGG 2 cut(s) 585, 1595
VneI GTGCAC 1 cut(s) 1850
VpaK11BI GGWCC 1 cut(s) 1259
VspI ATTAAT 2 cut(s) 159, 230
XagI CCTNNNNNAGG 1 cut(s) 1290
XapI RAATTY 4 cut(s) 144, 218, 925, 1462
XceI RCATGY 1 cut(s) 1474
XcmI CCANNNNNNNNNTGG 2 cut(s) 586, 1270
XmiI GTMKAC 1 cut(s) 1410
XspI CTAG 5 cut(s) 635, 1313, 1611, 1632, 1881
Zsp2I ATGCAT 1 cut(s) 1933
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.