Rorug05G0059900

Potassium transporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
5233303 .. 5235966
2664 bp
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UTR
Exon/CDS
Intron
Rorug05G0059900.1

Sequence Viewer

Length: 1353 bp
ATGGAGCAAATTACAAAGGGAAAGAGGTTGATCTTGTTCCCACTTCCCCTTGAAGGCCATATAAACCCCATGCTACAGCTGGCTAATCTTCTACACTCCAAAGGCTTCTCCATAACCATCATCCACACCCAGTTCAACTCCCCAAACCCTTCACTCCATCCACACTTCACCTTTCGCTCAATCCCAGATGGGTTGTCTGAAACTGAGGCTTCCCCCAAAGATATCATCCTTCTCTTCTCTCTTTTCAATACTAAATGTGTTGAACCCTTCACGTTATGCTTGTCTAGCTTGTTATCAGAGGAGCCTGTTGCTTGTTTGATCTCTGACTCTATATTCCATTTCACTCAATCTGTTGCTGAGAGCTTTAAGCTCCCTAGGATTGTCTTTGAGACCGGGGGTATGACTTCTTATGCTGTTTTTACTCAGTTTCCACTATTAAGAGAAAAGGGCTACCTTCCGGTCACGCAAGATTCTCAACTAGAAAAGGTGGTGACGGAGCTTCCACCTCTCAGAATCAAAGACCTTCCGGTGACCCCAAAAGGTGACCCGGAGAAATATTTTGAACTATGTGTAGTTATCGTTACCAAAATTGCAGCCTCTGATGGAGTCATTTTTAACACTTTTAGAGACCTTGAAGAGCAAGGACTGGCAACATTGCACAAACAATACCCTAATCTTCTAGTTTTCCCAATAGGCCCATTTCACAAGTGTGTCCCTGAGGAAGCCTCTTCTTCAATTAGCGACCAAAGTTGCATTTCTTGGCTGAACACCCGAGCACCAAACTCTGTTATCTATGTTAGCTTTGGGACCATTGCAGCAATAACTGAAGCTCAGTTTTGGGAGATAGCTTGGGGACTAGCCAATAGCAACCAACCTTTCTTGTGGGTGGTTCGACCCGGATTAGTCCACGGGTCGGATAATTGGCTCGAACAATTGCCTAGTGGGTTTCTTGAGAATTTGAATGGGAGGGGTCACATTGTGAAATGGGCACCCCAAAAAGAAGTGTTGGCACATCCATCAATTGGAGCTTTTTGGACTCACAATGGTTGGAATTCTACATTGGAGAGTGTTTGTGAAGGTGTCCCCATGATTTGTATGCCTTGTTTCAATGATCAACTGGTGCTTGCAAGGTATGTGAGTGAGGTTTGGAAAATTGGGTTGCAGTTTGAGAATGGAATTGAGAGAGGTGAGATTGAAGGCACAATTAGGAAATTAATGGAGGAGAAAGAAGGAGAAGAAATCAGAGACAGAAGCTTGAAGCTAATGGAGAAAGCAAATGTTTGCTTCAAACCAGGTGGATCTTCATGCCAATGCTTGGATGACTTGGTCAAACATATTTTATCATTTGAATAA

Protein Analysis

450

Amino Acids

50.45

Weight (kDa)

5.46

Isoelectric Point (pI)

47.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 254 - 409 1e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000477)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G31120 AT2G35060 AT2G35060 AT2G35060 AT2G35060 AT4G19960 AT4G19960 AT4G19960 AT4G19960
fragaria_vesca FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12500 FvH4_3g12501 FvH4_3g12501 FvH4_3g12502 FvH4_3g12502 FvH4_3g12502
malus_domestica MD05G1249700.v1.1 MD05G1249800.v1.1 MD10G1230100.v1.1 MD10G1230400.v1.1
prunus_persica Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114000_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114200_v2.0.a1 Prupe.4G114300_v2.0.a1
pyrus_communis pycom05g22700 pycom05g22730 pycom10g19380 pycom10g19390 pycom10g19400
rosa_chinensis RchiOBHm_Chr5g0020451 RchiOBHm_Chr5g0020461 RchiOBHm_Chr5g0020471 RchiOBHm_Chr5g0020491
rosa_laevigata RLG00000032531 RLG00000032532 RLG00000032533 RLG00000032534
rosa_multiflora Rmu_sc0000033.1_g000001 Rmu_sc0000033.1_g000004 Rmu_sc0009651.1_g000001 Rmu_sc0009745.1_g000016 Rmu_sc0030432.1_g000001
rosa_roxburghii Rroxscaffold_1G00057790 Rroxscaffold_1G00057800 Rroxscaffold_1G00057810 Rroxscaffold_1G00057830
rosa_rugosa Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059500 Rorug05G0059600 Rorug05G0059700 Rorug05G0059800 Rorug05G0059900 Rorug05G0060000 Rorug05G0060100
rosa_samantha Rh5AG150600 Rh5AG150700 Rh5AG150800 Rh5AG150900 Rh5BG149500 Rh5BG149800 Rh5BG149900 Rh5BG150000 Rh5CG161100 Rh5CG161200 Rh5CG161400 Rh5DG149100 Rh5DG149200 Rh5DG149300 Rh5DG149400
rosa_wichuraiana Rw5G013300 Rw5G013310 Rw5G013320 Rw5G013330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 988
AccB7I CCANNNNNTGG 2 cut(s) 1022, 1315
AclWI GGATC 1 cut(s) 1306
AcsI RAATTY 2 cut(s) 955, 1051
AcuI CTGAAG 1 cut(s) 846
AdeI CACNNNGTG 1 cut(s) 979
AfiI CCNNNNNNNGG 4 cut(s) 53, 913, 1022, 1315
AjnI CCWGG 1 cut(s) 1291
AjuI GAANNNNNNNTTGG 2 cut(s) 1043, 1075
AleI CACNNNNGTG 1 cut(s) 708
Alw21I GWGCWC 1 cut(s) 778
Alw26I GTCTC 3 cut(s) 383, 621, 1239
AlwI GGATC 1 cut(s) 1306
AlwNI CAGNNNCTG 1 cut(s) 599
Ama87I CYCGRG 1 cut(s) 771
AoxI GGCC 2 cut(s) 55, 694
ApeKI GCWGC 2 cut(s) 593, 815
ApoI RAATTY 2 cut(s) 955, 1051
AseI ATTAAT 1 cut(s) 1214
AspA2I CCTAGG 1 cut(s) 374
AspS9I GGNCC 2 cut(s) 695, 807
AsuC2I CCSGG 3 cut(s) 394, 548, 897
AsuHPI GGTGA 5 cut(s) 160, 502, 541, 554, 1199
AvaI CYCGRG 1 cut(s) 771
AvaII GGWCC 1 cut(s) 807
AvrII CCTAGG 1 cut(s) 374
AxyI CCTNAGG 1 cut(s) 717
BaeGI GKGCMC 1 cut(s) 991
BanI GGYRCC 1 cut(s) 988
Bbv12I GWGCWC 1 cut(s) 778
BbvI GCAGC 2 cut(s) 605, 827
BccI CCATC 5 cut(s) 125, 165, 182, 596, 1024
BciT130I CCWGG 1 cut(s) 1293
BclI TGATCA 1 cut(s) 1111
BcnI CCSGG 3 cut(s) 394, 548, 897
BcoDI GTCTC 3 cut(s) 383, 621, 1239
BfaI CTAG 6 cut(s) 285, 375, 479, 680, 857, 939
BfmI CTRYAG 1 cut(s) 74
BisI GCNGC 2 cut(s) 594, 816
BlnI CCTAGG 1 cut(s) 374
BlsI GCNGC 2 cut(s) 595, 817
Bme1390I CCNGG 4 cut(s) 394, 548, 897, 1293
Bme18I GGWCC 1 cut(s) 807
BmeT110I CYCGRG 1 cut(s) 771
BmgT120I GGNCC 2 cut(s) 695, 807
BmiI GGNNCC 3 cut(s) 303, 808, 990
BmrFI CCNGG 4 cut(s) 394, 548, 897, 1293
BmrI ACTGGG 1 cut(s) 124
BmuI ACTGGG 1 cut(s) 124
BplI GAGNNNNNCTC 2 cut(s) 710, 742
BpuEI CTTGAG 1 cut(s) 971
BpuMI CCSGG 3 cut(s) 394, 548, 897
BsaI GGTCTC 2 cut(s) 383, 621
BsaJI CCNNGG 3 cut(s) 374, 393, 907
BsaWI WCCGGW 2 cut(s) 457, 526
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 913, 1022, 1315
Bse1I ACTGG 3 cut(s) 130, 651, 1122
Bse21I CCTNAGG 1 cut(s) 717
Bse3DI GCAATG 2 cut(s) 653, 810
BseBI CCWGG 1 cut(s) 1293
BseDI CCNNGG 3 cut(s) 374, 393, 907
BseGI GGATG 5 cut(s) 120, 157, 225, 1012, 1324
BseLI CCNNNNNNNGG 4 cut(s) 53, 913, 1022, 1315
BseMI GCAATG 2 cut(s) 653, 810
BseMII CTCAG 6 cut(s) 195, 348, 437, 523, 708, 845
BseNI ACTGG 3 cut(s) 130, 651, 1122
BseRI GAGGAG 2 cut(s) 314, 1235
BseSI GKGCMC 1 cut(s) 991
BseXI GCAGC 2 cut(s) 605, 827
BshFI GGCC 2 cut(s) 57, 696
BshNI GGYRCC 1 cut(s) 988
BsiHKAI GWGCWC 1 cut(s) 778
BsiHKCI CYCGRG 1 cut(s) 771
BsiSI CCGG 5 cut(s) 393, 458, 527, 548, 897
BslFI GGGAC 4 cut(s) 698, 820, 867, 1067
BslI CCNNNNNNNGG 4 cut(s) 53, 913, 1022, 1315
BsmAI GTCTC 3 cut(s) 383, 621, 1239
BsmFI GGGAC 4 cut(s) 698, 820, 867, 1067
BsnI GGCC 2 cut(s) 57, 696
Bso31I GGTCTC 2 cut(s) 383, 621
BsoBI CYCGRG 1 cut(s) 771
Bsp1286I GDGCHC 2 cut(s) 778, 991
Bsp143I GATC 4 cut(s) 30, 318, 1111, 1298
BspANI GGCC 2 cut(s) 57, 696
BspCNI CTCAG 6 cut(s) 196, 349, 436, 522, 709, 844
BspLI GGNNCC 3 cut(s) 303, 808, 990
BspPI GGATC 1 cut(s) 1306
BspQI GCTCTTC 1 cut(s) 630
BspT107I GGYRCC 1 cut(s) 988
BspTNI GGTCTC 2 cut(s) 383, 621
BsrDI GCAATG 2 cut(s) 653, 810
BsrI ACTGG 3 cut(s) 130, 651, 1122
BssECI CCNNGG 3 cut(s) 374, 393, 907
BssMI GATC 4 cut(s) 30, 318, 1111, 1298
BssT1I CCWWGG 1 cut(s) 374
Bst2UI CCWGG 1 cut(s) 1293
Bst6I CTCTTC 3 cut(s) 239, 630, 733
BstC8I GCNNGC 2 cut(s) 81, 1125
BstDEI CTNAG 6 cut(s) 204, 357, 423, 509, 717, 831
BstDSI CCRYGG 1 cut(s) 907
BstEII GGTNACC 2 cut(s) 529, 542
BstF5I GGATG 5 cut(s) 120, 157, 225, 1012, 1324
BstKTI GATC 4 cut(s) 33, 321, 1114, 1301
BstMAI GTCTC 3 cut(s) 383, 621, 1239
BstMBI GATC 4 cut(s) 30, 318, 1111, 1298
BstMWI GCNNNNNNNGC 1 cut(s) 285
BstNI CCWGG 1 cut(s) 1293
BstPI GGTNACC 2 cut(s) 529, 542
BstSCI CCNGG 4 cut(s) 392, 546, 895, 1291
BstSFI CTRYAG 1 cut(s) 74
BstSLI GKGCMC 1 cut(s) 991
BstV1I GCAGC 2 cut(s) 605, 827
BstX2I RGATCY 1 cut(s) 1298
BstYI RGATCY 1 cut(s) 1298
Bsu36I CCTNAGG 1 cut(s) 717
BsuRI GGCC 2 cut(s) 57, 696
BtgI CCRYGG 1 cut(s) 907
BtsCI GGATG 5 cut(s) 120, 157, 225, 1012, 1324
Cac8I GCNNGC 2 cut(s) 81, 1125
CaiI CAGNNNCTG 1 cut(s) 599
Cfr13I GGNCC 2 cut(s) 695, 807
CsiI ACCWGGT 1 cut(s) 1291
CspCI CAANNNNNGTGG 2 cut(s) 1276, 1311
CviAII CATG 3 cut(s) 70, 1087, 1305
DdeI CTNAG 6 cut(s) 204, 357, 423, 509, 717, 831
DpnI GATC 4 cut(s) 32, 320, 1113, 1300
DpnII GATC 4 cut(s) 30, 318, 1111, 1298
DraIII CACNNNGTG 1 cut(s) 979
Eam1104I CTCTTC 3 cut(s) 239, 630, 733
EarI CTCTTC 3 cut(s) 239, 630, 733
Eco130I CCWWGG 1 cut(s) 374
Eco31I GGTCTC 2 cut(s) 383, 621
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 1 cut(s) 807
Eco57I CTGAAG 1 cut(s) 846
Eco81I CCTNAGG 1 cut(s) 717
Eco88I CYCGRG 1 cut(s) 771
Eco91I GGTNACC 2 cut(s) 529, 542
EcoO65I GGTNACC 2 cut(s) 529, 542
EcoRI GAATTC 1 cut(s) 1051
EcoRII CCWGG 1 cut(s) 1291
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 374
ErhI CCWWGG 1 cut(s) 374
FaeI CATG 3 cut(s) 73, 1090, 1308
FaqI GGGAC 4 cut(s) 698, 820, 867, 1067
FatI CATG 3 cut(s) 69, 1086, 1304
FbaI TGATCA 1 cut(s) 1111
Fnu4HI GCNGC 2 cut(s) 594, 816
FokI GGATG 5 cut(s) 107, 144, 212, 999, 1331
Fsp4HI GCNGC 2 cut(s) 594, 816
FspBI CTAG 6 cut(s) 285, 375, 479, 680, 857, 939
GluI GCNGC 2 cut(s) 594, 816
HaeIII GGCC 2 cut(s) 57, 696
HapII CCGG 5 cut(s) 393, 458, 527, 548, 897
Hin1II CATG 3 cut(s) 73, 1090, 1308
HindIII AAGCTT 1 cut(s) 1252
HinfI GANTC 5 cut(s) 326, 470, 513, 606, 1036
HpaII CCGG 5 cut(s) 393, 458, 527, 548, 897
HphI GGTGA 5 cut(s) 160, 502, 541, 554, 1199
Hpy166II GTNNAC 1 cut(s) 907
Hpy188I TCNGA 7 cut(s) 199, 298, 325, 512, 601, 916, 1244
Hpy188III TCNNGA 1 cut(s) 950
Hpy8I GTNNAC 1 cut(s) 907
HpyAV CCTTC 9 cut(s) 47, 159, 239, 277, 464, 533, 1070, 1190, 1223
HpyCH4IV ACGT 1 cut(s) 272
HpyCH4V TGCA 6 cut(s) 593, 658, 753, 815, 1127, 1162
HpyF10VI GCNNNNNNNGC 1 cut(s) 285
HpyF3I CTNAG 6 cut(s) 204, 357, 423, 509, 717, 831
HpySE526I ACGT 1 cut(s) 272
Hsp92II CATG 3 cut(s) 73, 1090, 1308
Ksp22I TGATCA 1 cut(s) 1111
Kzo9I GATC 4 cut(s) 30, 318, 1111, 1298
LguI GCTCTTC 1 cut(s) 630
LmnI GCTCC 5 cut(s) 4, 301, 375, 496, 1025
Lsp1109I GCAGC 2 cut(s) 605, 827
MabI ACCWGGT 1 cut(s) 1291
MaeI CTAG 6 cut(s) 285, 375, 479, 680, 857, 939
MaeII ACGT 1 cut(s) 272
MaeIII GTNAC 6 cut(s) 460, 490, 529, 542, 580, 971
MalI GATC 4 cut(s) 32, 320, 1113, 1300
MboI GATC 4 cut(s) 30, 318, 1111, 1298
MboII GAAGA 8 cut(s) 80, 226, 647, 668, 720, 723, 1247, 1293
MfeI CAATTG 2 cut(s) 932, 1020
MflI RGATCY 1 cut(s) 1298
MhlI GDGCHC 2 cut(s) 778, 991
MlyI GAGTC 3 cut(s) 320, 615, 1030
MmeI TCCRAC 2 cut(s) 894, 1028
MseI TTAA 4 cut(s) 366, 437, 615, 1214
MslI CAYNNNNRTG 2 cut(s) 708, 1309
MspA1I CMGCKG 1 cut(s) 79
MspI CCGG 5 cut(s) 393, 458, 527, 548, 897
MspR9I CCNGG 4 cut(s) 394, 548, 897, 1293
MunI CAATTG 2 cut(s) 932, 1020
MvaI CCWGG 1 cut(s) 1293
MwoI GCNNNNNNNGC 1 cut(s) 285
NciI CCSGG 3 cut(s) 394, 548, 897
NdeII GATC 4 cut(s) 30, 318, 1111, 1298
NlaIII CATG 3 cut(s) 73, 1090, 1308
NlaIV GGNNCC 3 cut(s) 303, 808, 990
NmuCI GTSAC 5 cut(s) 460, 490, 529, 542, 971
OliI CACNNNNGTG 1 cut(s) 708
PciSI GCTCTTC 1 cut(s) 630
PfeI GAWTC 2 cut(s) 470, 513
PflFI GACNNNGTC 1 cut(s) 1325
PflMI CCANNNNNTGG 2 cut(s) 1022, 1315
PkrI GCNGC 2 cut(s) 595, 817
PleI GAGTC 3 cut(s) 320, 614, 1030
PpsI GAGTC 3 cut(s) 320, 614, 1030
PshBI ATTAAT 1 cut(s) 1214
Psp6I CCWGG 1 cut(s) 1291
PspEI GGTNACC 2 cut(s) 529, 542
PspGI CCWGG 1 cut(s) 1291
PspN4I GGNNCC 3 cut(s) 303, 808, 990
PspPI GGNCC 2 cut(s) 695, 807
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 1 cut(s) 1298
PsyI GACNNNGTC 1 cut(s) 1325
PvuII CAGCTG 1 cut(s) 79
RseI CAYNNNNRTG 2 cut(s) 708, 1309
SapI GCTCTTC 1 cut(s) 630
SaqAI TTAA 4 cut(s) 366, 437, 615, 1214
SatI GCNGC 2 cut(s) 594, 816
Sau3AI GATC 4 cut(s) 30, 318, 1111, 1298
Sau96I GGNCC 2 cut(s) 695, 807
SchI GAGTC 3 cut(s) 320, 615, 1030
ScrFI CCNGG 4 cut(s) 394, 548, 897, 1293
SduI GDGCHC 2 cut(s) 778, 991
SexAI ACCWGGT 1 cut(s) 1291
SfcI CTRYAG 1 cut(s) 74
SinI GGWCC 1 cut(s) 807
SmiMI CAYNNNNRTG 2 cut(s) 708, 1309
SmlI CTYRAG 1 cut(s) 950
SmoI CTYRAG 1 cut(s) 950
SspI AATATT 1 cut(s) 557
SspMI CTAG 6 cut(s) 285, 375, 479, 680, 857, 939
StyD4I CCNGG 4 cut(s) 392, 546, 895, 1291
StyI CCWWGG 1 cut(s) 374
TaiI ACGT 1 cut(s) 275
TaqI TCGA 2 cut(s) 892, 927
TfiI GAWTC 2 cut(s) 470, 513
Tru1I TTAA 4 cut(s) 366, 437, 615, 1214
Tru9I TTAA 4 cut(s) 366, 437, 615, 1214
TseFI GTSAC 5 cut(s) 460, 490, 529, 542, 971
TseI GCWGC 2 cut(s) 593, 815
Tsp45I GTSAC 5 cut(s) 460, 490, 529, 542, 971
TspDTI ATGAA 1 cut(s) 1293
TspGWI ACGGA 1 cut(s) 509
Tth111I GACNNNGTC 1 cut(s) 1325
Van91I CCANNNNNTGG 2 cut(s) 1022, 1315
VpaK11BI GGWCC 1 cut(s) 807
VspI ATTAAT 1 cut(s) 1214
XapI RAATTY 2 cut(s) 955, 1051
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XmaJI CCTAGG 1 cut(s) 374
XspI CTAG 6 cut(s) 285, 375, 479, 680, 857, 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.