Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002242

Physical Location & Seq

Genomic Coordinates Reverse (-)

6563546 .. 6572554

Gene Structure 9009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g07160.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2526 bp

ATGAAAATCATAGAATGTTGCAAATCAAGCATGTTGAAGGAACGGCAGGAGCTTCTCCAGAAAGTAGTCAAGCCTTTGACGGGTCGTTTAGAGATTTTAGTACCTAATGGTGGCCTTAACACTCGCCGTTCTTCAGGCGAACCTTGTTGGTCCCTTGTTGTTCATACTGTGGATGATGTTCAGAGGTTTTTCAAAGAAACCATAGCGAACAGAGATGAGGGGATTGTTATAAAGGACCTTGGTTCTAAATGGGAACCTAGTGATCGTAGTGGAAAGTGGTTGAAACTGAAGCCGGATTACATTCGGGCTGGTTCTGATCTGGATGTTCTGATAATAGGAGGATACTATGGTTCAGGGCGTCGTGGAGGGGAGGTAGCTCAGTTCTTGGTGGGTCTTGCTGAACGTCCGGTTGCAAATACTTATCCAAGAAGATTTGTATCGTTTTGTAGAGTGGGTACTGGACTTACTGATGAGGAGTTAGATGCTGTGGCAACCAAATTAAAACCTTATCTAAGGAAGTATGACTACCCCAAAAAGGCCCCACCAAGTTTTTATGAAGTAACGAACCATTCAAAAGAGAGACCAGATGTTTGGGTTGAAAGCCCTGAGAAATCAATAATCCTTTCCATAACGAGTGACATCCGAACCATAAGGTCCGAGGTTTTTGCTGCACCATACAGCCTGAGATTTCCACGTATTGATCGAATTAGATATGATAAACCTTGGCATGAATGCCTTGATGTGCAATCATTTATAGAGCTTGTAGATTCAGGTAATGGTACCACACAAAAGGGGACAGGGACAGATTATGGTGGCCTGCAGGATGATAAAAAGAAACACAAGAGGATCTCTAAAAAGGAAGAGAAAAGAAATCTATCTCTTGTTCCCTCTCATTTAGTTCAGACTGATGTTTCTGGTGTCAAGGAGGACAGCTTAATATTTTCAAAAATGATGTTCTACTTTGTTAATGTGCCTCCAACTCATTCTCTTGATTCCTTGCACAAAATAGTTGCTGAGAATGGGGGTACTTTTTCGATGAATTTGAATAACTCAGTCACCCACTGTGTTGCAGCTGAAAGCAAAGGGATTAAATATCAGGCAGCAAAACGTCAGGGAGATGTCATTCATTTGTCTTGGGTCTTGGATTGTTGTTCTCTAAAGAAACTCCTTCCTTTACAGCCAAAGTACTACCTCTCAATTTCTGATTCTTCAAAGAAGAAGTTAGAAGAAGAAATTGATGAGTTTTCTGACCCGTATTTCTGGGACCTTGACCTTGCAGACATGAAGCAGCTGTTGAGCAATGTGCCTAGATCAGAGGATGCGAAACGTATCAACTATTACAAGAAAAAATACTGTCCTATGGAGAAATGGTCTCGATTTCACGGCTGCTGCATTTGCTTTAACTCATCAATTCATTCCCTGAAACCGGATTGGGAAGTCATGTTAGGAGTTACAGTACGAAGGTTGAAGATTGAAGTTCTCATGGGTGGTGGCAGAGTCAGTGATAATCTTGCTGATGCCACCCATTTGGTACTCTTGTCAATTCAGGGGTGTGATGTGGGATTCGAAACCTTATCGCAAAGTTTGACTGAAGCGGAGAAGCACTTTTTGCATAACAAAAGGTTGCATGTTGTTGGACTGCAATGGTTGGAAGACTGCTTGGAAAAGAAGCAAAGATTACAAGAGGAATCATATAGTTTGAAACCCTATGGGTGGGAAGAATTCAACATCGAAGAGTGTAACCATGACATGGTTTTAGAAGAAGCGCCCAGTGATAATGTGGAAATTCAGAAGGTTCCTTCTGCTTCTAAGAAAGGGAGAAACAGAGGCAATGCAGCTCAAGAAAACAATGGGATCTTGCGCTCGCCTGAGAGGGGTAGCAAAAGGAAAAGAGGAAGACCTGCTGGCACAAACAGAGGGAAAAGTGGTGCCACCCAAACTCGAAGAACACGGGCACGTATTGGCAGGAAGCCTGCTAAAATATCTTTCCATGAGTCAGACGAAAGTGATTCTTATGATCATACATCATTTAAGGAAGACGTTGATATCGCTGAGGGAACACATGAGATGGTAGGTGACAGAAGTTTAGACATGCAAAGAAATGAGGCAATGAAAGATTCTACATCATCACAAAGTGGTAAGGCAGCTGAACAAGAGGTTGTTGCAGACATAAGATTCGATGGCAATTCTGTTAAATTTCCTGAAATTGAAATGATTGAGAAGCATAATAGCCAAGATCAAGATAACAAGGAGAAACTCGAAGTTAATGATGATCCAGTTCAAGCCATGTTGCTTGGTCTTATTCCCAGTCTTGGAACAAAGAATGCTCAAACTATGAAAATGAGTATTGAGTCTGAGAAGCCACCTGTAGATCTGATTCCAAGTCATGGAAAGAAGAATGTCCAAACCACATCGCATACTAGTGCCGAGGATGACAAGCCACCATGTGATATAGTTGCAGAGCCTACAAAGAAAAAGAAAGTTAGCTATAAGGATCTTGCTAGTCAGCTACTTAAGGATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000726 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005911 GO:0006139 GO:0006259 GO:0006266 GO:0006281 GO:0006289 GO:0006297 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009506 GO:0009628 GO:0009987 GO:0010165 GO:0010212 GO:0016874 GO:0016886 GO:0030054 GO:0032807 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048046 GO:0050896 GO:0051103 GO:0051716 GO:0055044 GO:0071704 GO:0090304 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03450 map03450

Pfam Domains

Protein Families

BRCT_2 DNA_ligase_A_C DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV

Protein Analysis

842

Amino Acids

95.17

Weight (kDa)

8.13

Isoelectric Point (pI)

49.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_ligase_A_M	PF01068	12 - 97	9.5e-10	ATP dependent DNA ligase domain
DNA_ligase_A_C	PF04679	121 - 240	1.2e-11	ATP dependent DNA ligase C terminal region
BRCT	PF00533	311 - 383	6.3e-07	BRCA1 C Terminus (BRCT) domain
BRCT_2	PF16589	313 - 394	9.4e-12	BRCT domain
PTCB-BRCT	PF12738	329 - 372	6.6e-09	twin BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57160 AT5G57160
fragaria_vesca	FvH4_4g07160
malus_domestica	MD16G1247900.v1.1
prunus_persica	Prupe.1G074600_v2.0.a1 Prupe.1G074600_v2.0.a1
pyrus_communis	pycom12g16110 pycom12g16210 pycom16g20800
rosa_chinensis	RchiOBHm_Chr0c22g0500591 RchiOBHm_Chr4g0399311 RchiOBHm_Chr5g0052491 RchiOBHm_Chr7g0206661
rosa_laevigata	RLG00000009274 RLG00000012027 RLG00000013478 RLG00000013735 RLG00000034678
rosa_multiflora	Rmu_co8101330.1_g000001 Rmu_co8329359.1_g000001 Rmu_sc0000924.1_g000031 Rmu_sc0003135.1_g000008
rosa_roxburghii	Rroxscaffold_4G00283390 Rroxscaffold_4G00329320 Rroxscaffold_5G00344240
rosa_rugosa	Rorug04G0016500
rosa_samantha	Rh2AG218900 Rh2BG192100 Rh2BG230700 Rh2CG361900 Rh2DG225100 Rh3BG254200 Rh3DG357600 Rh4AG094200 Rh4AG102100 Rh4BG091600 Rh4CG102400 Rh4CG110300 Rh4DG086300 Rh7DG237100 Rh7DG335000 Rh7DG335200
rosa_wichuraiana	Rw4G007730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	230
Acc36I	ACCTGC	1 cut(s)	1909
Acc65I	GGTACC	1 cut(s)	779
AccB1I	GGYRCC	2 cut(s)	779, 1928
AccB7I	CCANNNNNTGG	2 cut(s)	1750, 2387
AciI	CCGC	1 cut(s)	1595
AclWI	GGATC	4 cut(s)	854, 1862, 2267, 2502
AcsI	RAATTY	4 cut(s)	1039, 1721, 1785, 2195
AcuI	CTGAAG	3 cut(s)	117, 308, 1611
AcyI	GRCGYC	1 cut(s)	358
AdeI	CACNNNGTG	2 cut(s)	2135, 2447
AfaI	GTAC	7 cut(s)	102, 457, 781, 1027, 1187, 1458, 1533
AfiI	CCNNNNNNNGG	9 cut(s)	80, 110, 535, 1426, 1713, 1750, 1874, 2312, 2387
AflII	CTTAAG	1 cut(s)	2513
AhlI	ACTAGT	1 cut(s)	2420
Alw26I	GTCTC	2 cut(s)	574, 1377
AlwI	GGATC	4 cut(s)	854, 1862, 2267, 2502
AoxI	GGCC	3 cut(s)	112, 537, 814
ApeKI	GCWGC	8 cut(s)	668, 1070, 1100, 1288, 1386, 1389, 1835, 2144
ApoI	RAATTY	4 cut(s)	1039, 1721, 1785, 2195
ArsI	GACNNNNNNTTYG	4 cut(s)	573, 605, 2159, 2191
Asp718I	GGTACC	1 cut(s)	779
AspLEI	GCGC	2 cut(s)	1768, 1863
AspS9I	GGNCC	5 cut(s)	150, 235, 538, 654, 1264
AsuHPI	GGTGA	2 cut(s)	1048, 2087
AsuII	TTCGAA	1 cut(s)	1566
AvaII	GGWCC	4 cut(s)	150, 235, 654, 1264
BaeGI	GKGCMC	1 cut(s)	1957
BaeI	ACNNNNGTAYC	4 cut(s)	334, 367, 1523, 1556
BanI	GGYRCC	2 cut(s)	779, 1928
BarI	GAAGNNNNNNTAC	4 cut(s)	281, 313, 509, 541
BbsI	GAAGAC	3 cut(s)	1659, 1903, 2043
BbvCI	CCTCAGC	1 cut(s)	2052
BbvI	GCAGC	8 cut(s)	655, 1082, 1112, 1300, 1373, 1376, 1847, 2156
BccI	CCATC	2 cut(s)	2062, 2174
BceAI	ACGGC	3 cut(s)	59, 111, 1399
BcgI	CGANNNNNNTGC	2 cut(s)	647, 681
BciVI	GTATCC	1 cut(s)	335
BclI	TGATCA	1 cut(s)	2017
BcoDI	GTCTC	2 cut(s)	574, 1377
BcuI	ACTAGT	1 cut(s)	2420
BfaI	CTAG	4 cut(s)	258, 1308, 2421, 2502
BfmI	CTRYAG	2 cut(s)	818, 2367
BfoI	RGCGCY	1 cut(s)	1769
BfrI	CTTAAG	1 cut(s)	2513
BfuAI	ACCTGC	1 cut(s)	1909
BfuI	GTATCC	1 cut(s)	335
BglII	AGATCT	1 cut(s)	2371
BisI	GCNGC	8 cut(s)	669, 1071, 1101, 1289, 1387, 1390, 1836, 2145
BlsI	GCNGC	8 cut(s)	670, 1072, 1102, 1290, 1388, 1391, 1837, 2146
BmcAI	AGTACT	1 cut(s)	1187
Bme18I	GGWCC	4 cut(s)	150, 235, 654, 1264
BmgT120I	GGNCC	5 cut(s)	150, 235, 538, 654, 1264
BmiI	GGNNCC	7 cut(s)	152, 255, 540, 781, 1265, 1797, 1930
BmrI	ACTGGG	2 cut(s)	1764, 2301
BmsI	GCATC	3 cut(s)	472, 1309, 1507
BmuI	ACTGGG	2 cut(s)	1764, 2301
BpiI	GAAGAC	3 cut(s)	1659, 1903, 2043
BpmI	CTGGAG	1 cut(s)	41
Bpu10I	CCTNAGC	1 cut(s)	2052
Bpu14I	TTCGAA	1 cut(s)	1566
BpuEI	CTTGAG	1 cut(s)	1824
BsaAI	YACGTR	2 cut(s)	695, 1958
BsaBI	GATNNNNATC	1 cut(s)	436
BsaHI	GRCGYC	1 cut(s)	358
BsaI	GGTCTC	2 cut(s)	574, 1377
BsaJI	CCNNGG	4 cut(s)	238, 657, 722, 2427
BsaWI	WCCGGW	2 cut(s)	406, 1426
BsaXI	ACNNNNNCTCC	6 cut(s)	357, 387, 1355, 1385, 1440, 1470
Bsc4I	CCNNNNNNNGG	9 cut(s)	80, 110, 535, 1426, 1713, 1750, 1874, 2312, 2387
Bse1I	ACTGG	4 cut(s)	463, 1770, 2276, 2307
Bse3DI	GCAATG	4 cut(s)	1306, 1649, 1837, 2115
Bse8I	GATNNNNATC	1 cut(s)	436
BseDI	CCNNGG	4 cut(s)	238, 657, 722, 2427
BseGI	GGATG	6 cut(s)	178, 328, 639, 829, 1324, 2437
BseJI	GATNNNNATC	1 cut(s)	436
BseLI	CCNNNNNNNGG	9 cut(s)	80, 110, 535, 1426, 1713, 1750, 1874, 2312, 2387
BseMI	GCAATG	4 cut(s)	1306, 1649, 1837, 2115
BseMII	CTCAG	8 cut(s)	392, 597, 674, 1005, 1065, 1860, 2043, 2346
BseNI	ACTGG	4 cut(s)	463, 1770, 2276, 2307
BseRI	GAGGAG	1 cut(s)	488
BseSI	GKGCMC	1 cut(s)	1957
BseXI	GCAGC	8 cut(s)	655, 1082, 1112, 1300, 1373, 1376, 1847, 2156
BsgI	GTGCAG	1 cut(s)	654
BshFI	GGCC	3 cut(s)	114, 539, 816
BshNI	GGYRCC	2 cut(s)	779, 1928
BsiSI	CCGG	3 cut(s)	293, 407, 1427
BslFI	GGGAC	4 cut(s)	136, 808, 814, 1277
BslI	CCNNNNNNNGG	9 cut(s)	80, 110, 535, 1426, 1713, 1750, 1874, 2312, 2387
BsmAI	GTCTC	2 cut(s)	574, 1377
BsmFI	GGGAC	4 cut(s)	136, 808, 814, 1277
BsmI	GAATGC	2 cut(s)	737, 2329
BsnI	GGCC	3 cut(s)	114, 539, 816
Bso31I	GGTCTC	2 cut(s)	574, 1377
Bsp119I	TTCGAA	1 cut(s)	1566
Bsp1286I	GDGCHC	1 cut(s)	1957
BspACI	CCGC	1 cut(s)	1595
BspANI	GGCC	3 cut(s)	114, 539, 816
BspCNI	CTCAG	8 cut(s)	391, 598, 675, 1006, 1064, 1861, 2044, 2347
BspLI	GGNNCC	7 cut(s)	152, 255, 540, 781, 1265, 1797, 1930
BspMAI	CTGCAG	1 cut(s)	822
BspMI	ACCTGC	1 cut(s)	1909
BspPI	GGATC	4 cut(s)	854, 1862, 2267, 2502
BspT104I	TTCGAA	1 cut(s)	1566
BspT107I	GGYRCC	2 cut(s)	779, 1928
BspTI	CTTAAG	1 cut(s)	2513
BspTNI	GGTCTC	2 cut(s)	574, 1377
BsrDI	GCAATG	4 cut(s)	1306, 1649, 1837, 2115
BsrI	ACTGG	4 cut(s)	463, 1770, 2276, 2307
BssECI	CCNNGG	4 cut(s)	238, 657, 722, 2427
BssNI	GRCGYC	1 cut(s)	358
BssT1I	CCWWGG	2 cut(s)	238, 722
Bst4CI	ACNGT	4 cut(s)	169, 1064, 1355, 1456
Bst6I	CTCTTC	2 cut(s)	855, 1728
BstACI	GRCGYC	1 cut(s)	358
BstAFI	CTTAAG	1 cut(s)	2513
BstAPI	GCANNNNNTGC	1 cut(s)	1609
BstBAI	YACGTR	2 cut(s)	695, 1958
BstBI	TTCGAA	1 cut(s)	1566
BstC8I	GCNNGC	4 cut(s)	818, 1865, 1906, 1974
BstF5I	GGATG	6 cut(s)	178, 328, 639, 829, 1324, 2437
BstH2I	RGCGCY	1 cut(s)	1769
BstHHI	GCGC	2 cut(s)	1768, 1863
BstMAI	GTCTC	2 cut(s)	574, 1377
BstMWI	GCNNNNNNNGC	3 cut(s)	27, 1395, 1609
BstNSI	RCATGY	3 cut(s)	34, 1631, 2095
BstSFI	CTRYAG	2 cut(s)	818, 2367
BstSLI	GKGCMC	1 cut(s)	1957
BstV1I	GCAGC	8 cut(s)	655, 1082, 1112, 1300, 1373, 1376, 1847, 2156
BstV2I	GAAGAC	3 cut(s)	1659, 1903, 2043
BstX2I	RGATCY	4 cut(s)	846, 1854, 2371, 2494
BstXI	CCANNNNNNTGG	2 cut(s)	591, 1528
BstYI	RGATCY	4 cut(s)	846, 1854, 2371, 2494
BsuI	GTATCC	1 cut(s)	335
BsuRI	GGCC	3 cut(s)	114, 539, 816
BtgZI	GCGATG	1 cut(s)	2397
BtsCI	GGATG	6 cut(s)	178, 328, 639, 829, 1324, 2437
BtsIMutI	CAGTG	3 cut(s)	1060, 1507, 1777
BveI	ACCTGC	1 cut(s)	1909
Cac8I	GCNNGC	4 cut(s)	818, 1865, 1906, 1974
CfoI	GCGC	2 cut(s)	1768, 1863
Cfr13I	GGNCC	5 cut(s)	150, 235, 538, 654, 1264
CseI	GACGC	1 cut(s)	347
Csp6I	GTAC	7 cut(s)	101, 456, 780, 1026, 1186, 1457, 1532
CviQI	GTAC	7 cut(s)	101, 456, 780, 1026, 1186, 1457, 1532
DraIII	CACNNNGTG	2 cut(s)	2135, 2447
Eam1104I	CTCTTC	2 cut(s)	855, 1728
EarI	CTCTTC	2 cut(s)	855, 1728
Eco130I	CCWWGG	2 cut(s)	238, 722
Eco31I	GGTCTC	2 cut(s)	574, 1377
Eco32I	GATATC	1 cut(s)	2047
Eco47I	GGWCC	4 cut(s)	150, 235, 654, 1264
Eco57I	CTGAAG	3 cut(s)	117, 308, 1611
EcoO109I	RGGNCCY	3 cut(s)	235, 538, 1264
EcoRI	GAATTC	1 cut(s)	1721
EcoRV	GATATC	1 cut(s)	2047
EcoT14I	CCWWGG	2 cut(s)	238, 722
ErhI	CCWWGG	2 cut(s)	238, 722
FalI	AAGNNNNNCTT	2 cut(s)	1996, 2028
FaqI	GGGAC	4 cut(s)	136, 808, 814, 1277
FbaI	TGATCA	1 cut(s)	2017
Fnu4HI	GCNGC	8 cut(s)	669, 1071, 1101, 1289, 1387, 1390, 1836, 2145
FokI	GGATG	6 cut(s)	185, 335, 626, 836, 1331, 2444
Fsp4HI	GCNGC	8 cut(s)	669, 1071, 1101, 1289, 1387, 1390, 1836, 2145
FspBI	CTAG	4 cut(s)	258, 1308, 2421, 2502
GlaI	GCGC	2 cut(s)	1767, 1862
GluI	GCNGC	8 cut(s)	669, 1071, 1101, 1289, 1387, 1390, 1836, 2145
GsuI	CTGGAG	1 cut(s)	41
HaeII	RGCGCY	1 cut(s)	1769
HaeIII	GGCC	3 cut(s)	114, 539, 816
HapII	CCGG	3 cut(s)	293, 407, 1427
HgaI	GACGC	1 cut(s)	347
HhaI	GCGC	2 cut(s)	1768, 1863
Hin1I	GRCGYC	1 cut(s)	358
Hin6I	GCGC	2 cut(s)	1766, 1861
HinP1I	GCGC	2 cut(s)	1766, 1861
HpaII	CCGG	3 cut(s)	293, 407, 1427
HphI	GGTGA	2 cut(s)	1048, 2087
Hpy188III	TCNNGA	7 cut(s)	58, 320, 989, 1374, 1841, 2201, 2240
Hpy99I	CGWCG	1 cut(s)	363
HpyAV	CCTTC	5 cut(s)	31, 1178, 1455, 1786, 1809
HpyCH4III	ACNGT	4 cut(s)	169, 1064, 1355, 1456
HpyCH4IV	ACGT	6 cut(s)	403, 694, 1108, 1327, 1957, 2040
HpyF10VI	GCNNNNNNNGC	3 cut(s)	27, 1395, 1609
HpySE526I	ACGT	6 cut(s)	403, 694, 1108, 1327, 1957, 2040
Hsp92I	GRCGYC	1 cut(s)	358
HspAI	GCGC	2 cut(s)	1766, 1861
KpnI	GGTACC	1 cut(s)	783
Ksp22I	TGATCA	1 cut(s)	2017
LmnI	GCTCC	1 cut(s)	49
Lsp1109I	GCAGC	8 cut(s)	655, 1082, 1112, 1300, 1373, 1376, 1847, 2156
LweI	GCATC	3 cut(s)	472, 1309, 1507
MaeI	CTAG	4 cut(s)	258, 1308, 2421, 2502
MaeII	ACGT	6 cut(s)	403, 694, 1108, 1327, 1957, 2040
MaeIII	GTNAC	6 cut(s)	559, 635, 1054, 1450, 1739, 2075
MflI	RGATCY	4 cut(s)	846, 1854, 2371, 2494
MhlI	GDGCHC	1 cut(s)	1957
MlyI	GAGTC	3 cut(s)	1506, 2003, 2360
MmeI	TCCRAC	3 cut(s)	1001, 1615, 1629
MslI	CAYNNNNRTG	1 cut(s)	2421
MspA1I	CMGCKG	3 cut(s)	1073, 1291, 2147
MspCI	CTTAAG	1 cut(s)	2513
MspI	CCGG	3 cut(s)	293, 407, 1427
Mva1269I	GAATGC	2 cut(s)	737, 2329
MwoI	GCNNNNNNNGC	3 cut(s)	27, 1395, 1609
NlaIV	GGNNCC	7 cut(s)	152, 255, 540, 781, 1265, 1797, 1930
NmeAIII	GCCGAG	1 cut(s)	2452
NmuCI	GTSAC	3 cut(s)	635, 1054, 2075
NspI	RCATGY	3 cut(s)	34, 1631, 2095
NspV	TTCGAA	1 cut(s)	1566
PcsI	WCGNNNNNNNCGW	1 cut(s)	700
PctI	GAATGC	2 cut(s)	737, 2329
PfeI	GAWTC	9 cut(s)	767, 992, 1205, 1563, 1688, 2009, 2117, 2175, 2377
PflMI	CCANNNNNTGG	2 cut(s)	1750, 2387
PkrI	GCNGC	8 cut(s)	670, 1072, 1102, 1290, 1388, 1391, 1837, 2146
PleI	GAGTC	3 cut(s)	1505, 2002, 2359
PpsI	GAGTC	3 cut(s)	1505, 2002, 2359
Ppu21I	YACGTR	2 cut(s)	695, 1958
PpuMI	RGGWCCY	2 cut(s)	235, 1264
PsiI	TTATAA	1 cut(s)	230
Psp5II	RGGWCCY	2 cut(s)	235, 1264
PspN4I	GGNNCC	7 cut(s)	152, 255, 540, 781, 1265, 1797, 1930
PspPI	GGNCC	5 cut(s)	150, 235, 538, 654, 1264
PspPPI	RGGWCCY	2 cut(s)	235, 1264
PstI	CTGCAG	1 cut(s)	822
PsuI	RGATCY	4 cut(s)	846, 1854, 2371, 2494
PvuII	CAGCTG	3 cut(s)	1073, 1291, 2147
RsaI	GTAC	7 cut(s)	102, 457, 781, 1027, 1187, 1458, 1533
RsaNI	GTAC	7 cut(s)	101, 456, 780, 1026, 1186, 1457, 1532
RseI	CAYNNNNRTG	1 cut(s)	2421
SatI	GCNGC	8 cut(s)	669, 1071, 1101, 1289, 1387, 1390, 1836, 2145
Sau96I	GGNCC	5 cut(s)	150, 235, 538, 654, 1264
SbfI	CCTGCAGG	1 cut(s)	822
ScaI	AGTACT	1 cut(s)	1187
SchI	GAGTC	3 cut(s)	1506, 2003, 2360
SdaI	CCTGCAGG	1 cut(s)	822
SduI	GDGCHC	1 cut(s)	1957
SfaNI	GCATC	3 cut(s)	472, 1309, 1507
SfcI	CTRYAG	2 cut(s)	818, 2367
SfuI	TTCGAA	1 cut(s)	1566
SinI	GGWCC	4 cut(s)	150, 235, 654, 1264
SmiMI	CAYNNNNRTG	1 cut(s)	2421
SmlI	CTYRAG	2 cut(s)	1839, 2513
SmoI	CTYRAG	2 cut(s)	1839, 2513
SpeI	ACTAGT	1 cut(s)	2420
Sse8387I	CCTGCAGG	1 cut(s)	822
SsiI	CCGC	1 cut(s)	1595
SspI	AATATT	1 cut(s)	939
SspMI	CTAG	4 cut(s)	258, 1308, 2421, 2502
StyI	CCWWGG	2 cut(s)	238, 722
TaaI	ACNGT	4 cut(s)	169, 1064, 1355, 1456
TaiI	ACGT	6 cut(s)	406, 697, 1111, 1330, 1960, 2043
TaqI	TCGA	8 cut(s)	703, 1034, 1375, 1566, 1731, 1942, 2178, 2259
TatI	WGTACW	1 cut(s)	1185
TfiI	GAWTC	9 cut(s)	767, 992, 1205, 1563, 1688, 2009, 2117, 2175, 2377
TscAI	CASTG	3 cut(s)	1067, 1507, 1777
TseFI	GTSAC	3 cut(s)	635, 1054, 2075
TseI	GCWGC	8 cut(s)	668, 1070, 1100, 1288, 1386, 1389, 1835, 2144
Tsp45I	GTSAC	3 cut(s)	635, 1054, 2075
TspRI	CASTG	3 cut(s)	1067, 1507, 1777
Van91I	CCANNNNNTGG	2 cut(s)	1750, 2387
Vha464I	CTTAAG	1 cut(s)	2513
VpaK11BI	GGWCC	4 cut(s)	150, 235, 654, 1264
XapI	RAATTY	4 cut(s)	1039, 1721, 1785, 2195
XceI	RCATGY	3 cut(s)	34, 1631, 2095
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1777
XspI	CTAG	4 cut(s)	258, 1308, 2421, 2502
ZrmI	AGTACT	1 cut(s)	1187

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.