FvH4_4g18591

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
22459526 .. 22469586
10061 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g18591.t1

Sequence Viewer

Length: 960 bp
ATGGAGGGAATAGAGCACAGGACGGTCAAAGTCAACGGGATCAACATGCACGTAGCCGAAAAGGGTCAAGGCCCCGTGATCCTCTTCATCCACGGTTTCCCGGAGCTGTGGTACTGCTGGAGGCACCAAATCCAGGCCTTGGCCGCGGTCGGCTACCGCGCCGTAGCCCCGGACCTCCGCGGCTATGGCGACACCGACGCGCCCGCCGATCAGTCGAGCTACACGTGCCTCCACGTGGTCGGCGATCTGGTGGCGCTGTTGGATGCTGTAGCGGCGGATCAGGAGAAGGTGTTCGTGGTGGGGCACGACTGGGGTGCGTTGATCGCTTGGTATCTTTGTCTGTTTCGGCCGGACCGGGTTAAGGCTCTGGTCAACTTGAGCGTGGCGTTCAGTCCTAGAAATCCTCAGAGGAAGACTACTGAAATGTTGAGAGCTGTTTATGGGGATGACTATTACATGTGCAGATTTCAGGAACCAGGAGAGATTGAAGCTGAATTTGCCCAGATCGGTACTGCAAGAGTTATGAAGGAATTCCTGACATATCGCCATCCTGGTCCACTTTTCCTGCCTAAAGGTAAAGGCTTTCGACATCCTCCAGATGCTCCAATTCCTTTGCCAAGTTGGTTGTCTGAGGATGATGTTAACTACTATGTCAGCTTCTTCGAGAAGAAGGGCTTCACTGGTGGCATAAACTACTATCGAAACTTTGACAGGAACTGGGAACTGACTGCACCTTGGACTGGGGCTCGGATAAAAGTTCCAGTTAAGTTCATTGTGGGAGACCAGGACCTAGTTTATAATTCTCTTGGAGCCAAGGATTTCATACACAAAGGTGGGTTCAAGAAATATGTGCCGCTACTGGAAGAGGTAGTCGTAATGGAAGGAGTTGGCCATTTTATTAACGAAGAAAGGCCTAATGAAATTAGTGAACACATCCATGACTTCATCAAGAAGTTCTAG

Protein Analysis

320

Amino Acids

36.32

Weight (kDa)

6.18

Isoelectric Point (pI)

33.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chlorophyllase PF07224 19 - 116 3.5e-07 Chlorophyllase
Abhydrolase_1 PF00561 25 - 305 7e-27 alpha/beta hydrolase fold
Hydrolase_4 PF12146 26 - 144 4.9e-14 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 27 - 308 4.9e-23 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 798
AccB1I GGYRCC 1 cut(s) 123
AccB7I CCANNNNNTGG 1 cut(s) 139
AccII CGCG 4 cut(s) 146, 159, 180, 200
AciI CCGC 9 cut(s) 144, 146, 157, 178, 180, 204, 272, 275, 854
AclWI GGATC 3 cut(s) 47, 73, 285
AcoI YGGCCR 3 cut(s) 141, 347, 889
AcsI RAATTY 2 cut(s) 494, 530
AcvI CACGTG 2 cut(s) 225, 235
AfaI GTAC 2 cut(s) 113, 511
AfiI CCNNNNNNNGG 5 cut(s) 133, 139, 235, 361, 740
AflIII ACRYGT 2 cut(s) 222, 456
AgsI TTSAA 2 cut(s) 488, 841
AjnI CCWGG 4 cut(s) 132, 475, 550, 783
AleI CACNNNNGTG 1 cut(s) 831
AloI GAACNNNNNNTCC 2 cut(s) 275, 307
AluBI AGCT 5 cut(s) 106, 219, 434, 491, 657
AluI AGCT 5 cut(s) 106, 219, 434, 491, 657
Alw21I GWGCWC 1 cut(s) 18
Alw26I GTCTC 1 cut(s) 774
AlwI GGATC 3 cut(s) 47, 73, 285
AlwNI CAGNNNCTG 1 cut(s) 717
AoxI GGCC 6 cut(s) 70, 135, 141, 347, 889, 911
ApoI RAATTY 2 cut(s) 494, 530
Asp700I GAANNNNTTC 3 cut(s) 290, 530, 674
AspLEI GCGC 3 cut(s) 161, 202, 256
AspS9I GGNCC 5 cut(s) 71, 172, 352, 554, 787
AsuC2I CCSGG 3 cut(s) 101, 170, 356
AvaII GGWCC 4 cut(s) 172, 352, 554, 787
BaeGI GKGCMC 1 cut(s) 306
BalI TGGCCA 1 cut(s) 891
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 1 cut(s) 748
BbrPI CACGTG 2 cut(s) 225, 235
BbsI GAAGAC 1 cut(s) 419
Bbv12I GWGCWC 1 cut(s) 18
BccI CCATC 1 cut(s) 555
BceAI ACGGC 1 cut(s) 146
BcgI CGANNNNNNTGC 2 cut(s) 296, 330
BciT130I CCWGG 4 cut(s) 134, 477, 552, 785
BcnI CCSGG 3 cut(s) 101, 170, 356
BcoDI GTCTC 1 cut(s) 774
BfaI CTAG 3 cut(s) 396, 791, 958
BfmI CTRYAG 1 cut(s) 267
BfoI RGCGCY 1 cut(s) 257
BisI GCNGC 4 cut(s) 144, 181, 273, 854
BlsI GCNGC 4 cut(s) 145, 182, 274, 855
Bme1390I CCNGG 7 cut(s) 101, 134, 170, 356, 477, 552, 785
Bme18I GGWCC 4 cut(s) 172, 352, 554, 787
BmgT120I GGNCC 5 cut(s) 71, 172, 352, 554, 787
BmiI GGNNCC 4 cut(s) 73, 125, 474, 811
BmrFI CCNGG 7 cut(s) 101, 134, 170, 356, 477, 552, 785
BmrI ACTGGG 3 cut(s) 319, 727, 750
BmsI GCATC 2 cut(s) 253, 589
BmuI ACTGGG 3 cut(s) 319, 727, 750
BpiI GAAGAC 1 cut(s) 419
BpmI CTGGAG 2 cut(s) 139, 579
BpuEI CTTGAG 1 cut(s) 397
BpuMI CCSGG 3 cut(s) 101, 170, 356
BsaAI YACGTR 3 cut(s) 52, 225, 235
BsaI GGTCTC 1 cut(s) 774
BsaJI CCNNGG 7 cut(s) 91, 138, 144, 168, 178, 734, 813
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 275, 305
Bsc4I CCNNNNNNNGG 5 cut(s) 133, 139, 235, 361, 740
Bse1I ACTGG 6 cut(s) 314, 685, 722, 745, 761, 864
BseBI CCWGG 4 cut(s) 134, 477, 552, 785
BseDI CCNNGG 7 cut(s) 91, 138, 144, 168, 178, 734, 813
BseGI GGATG 7 cut(s) 87, 268, 451, 547, 589, 640, 933
BseLI CCNNNNNNNGG 5 cut(s) 133, 139, 235, 361, 740
BseMII CTCAG 2 cut(s) 419, 621
BseNI ACTGG 6 cut(s) 314, 685, 722, 745, 761, 864
BseSI GKGCMC 1 cut(s) 306
BseX3I CGGCCG 1 cut(s) 347
BsgI GTGCAG 2 cut(s) 481, 714
Bsh1236I CGCG 4 cut(s) 146, 159, 180, 200
Bsh1285I CGRYCG 2 cut(s) 150, 350
BshFI GGCC 6 cut(s) 72, 137, 143, 349, 891, 913
BshNI GGYRCC 1 cut(s) 123
BsiEI CGRYCG 2 cut(s) 150, 350
BsiHKAI GWGCWC 1 cut(s) 18
BsiSI CCGG 4 cut(s) 101, 170, 350, 355
BslI CCNNNNNNNGG 5 cut(s) 133, 139, 235, 361, 740
BsmAI GTCTC 1 cut(s) 774
BsnI GGCC 6 cut(s) 72, 137, 143, 349, 891, 913
Bso31I GGTCTC 1 cut(s) 774
Bsp1286I GDGCHC 3 cut(s) 18, 306, 748
Bsp143I GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
BspACI CCGC 9 cut(s) 144, 146, 157, 178, 180, 204, 272, 275, 854
BspANI GGCC 6 cut(s) 72, 137, 143, 349, 891, 913
BspCNI CTCAG 2 cut(s) 418, 622
BspFNI CGCG 4 cut(s) 146, 159, 180, 200
BspLI GGNNCC 4 cut(s) 73, 125, 474, 811
BspPI GGATC 3 cut(s) 47, 73, 285
BspT107I GGYRCC 1 cut(s) 123
BspTNI GGTCTC 1 cut(s) 774
BsrI ACTGG 6 cut(s) 314, 685, 722, 745, 761, 864
BssECI CCNNGG 7 cut(s) 91, 138, 144, 168, 178, 734, 813
BssMI GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
BssT1I CCWWGG 3 cut(s) 138, 734, 813
Bst2UI CCWGG 4 cut(s) 134, 477, 552, 785
Bst4CI ACNGT 2 cut(s) 25, 95
Bst6I CTCTTC 2 cut(s) 89, 858
BstBAI YACGTR 3 cut(s) 52, 225, 235
BstC8I GCNNGC 1 cut(s) 204
BstDEI CTNAG 2 cut(s) 405, 630
BstDSI CCRYGG 3 cut(s) 91, 144, 178
BstF5I GGATG 7 cut(s) 87, 268, 451, 547, 589, 640, 933
BstFNI CGCG 4 cut(s) 146, 159, 180, 200
BstH2I RGCGCY 1 cut(s) 257
BstHHI GCGC 3 cut(s) 161, 202, 256
BstKTI GATC 7 cut(s) 42, 81, 211, 247, 280, 324, 507
BstMAI GTCTC 1 cut(s) 774
BstMBI GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
BstMCI CGRYCG 2 cut(s) 150, 350
BstMWI GCNNNNNNNGC 6 cut(s) 143, 186, 225, 272, 323, 497
BstNI CCWGG 4 cut(s) 134, 477, 552, 785
BstNSI RCATGY 2 cut(s) 49, 460
BstSCI CCNGG 7 cut(s) 99, 132, 168, 354, 475, 550, 783
BstSFI CTRYAG 1 cut(s) 267
BstSLI GKGCMC 1 cut(s) 306
BstUI CGCG 4 cut(s) 146, 159, 180, 200
BstV2I GAAGAC 1 cut(s) 419
BstZI CGGCCG 1 cut(s) 347
BsuRI GGCC 6 cut(s) 72, 137, 143, 349, 891, 913
BtgI CCRYGG 3 cut(s) 91, 144, 178
BtsCI GGATG 7 cut(s) 87, 268, 451, 547, 589, 640, 933
BtsIMutI CAGTG 1 cut(s) 678
Cac8I GCNNGC 1 cut(s) 204
CaiI CAGNNNCTG 1 cut(s) 717
CfoI GCGC 3 cut(s) 161, 202, 256
Cfr13I GGNCC 5 cut(s) 71, 172, 352, 554, 787
Cfr42I CCGCGG 2 cut(s) 147, 181
CpoI CGGWCCG 1 cut(s) 352
CseI GACGC 1 cut(s) 206
Csp6I GTAC 2 cut(s) 112, 510
CspI CGGWCCG 1 cut(s) 352
CviAII CATG 3 cut(s) 46, 457, 938
CviQI GTAC 2 cut(s) 112, 510
DdeI CTNAG 2 cut(s) 405, 630
DpnI GATC 7 cut(s) 41, 80, 210, 246, 279, 323, 506
DpnII GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
EaeI YGGCCR 3 cut(s) 141, 347, 889
EagI CGGCCG 1 cut(s) 347
Eam1104I CTCTTC 2 cut(s) 89, 858
EarI CTCTTC 2 cut(s) 89, 858
EciI GGCGGA 1 cut(s) 290
EclXI CGGCCG 1 cut(s) 347
Eco130I CCWWGG 3 cut(s) 138, 734, 813
Eco147I AGGCCT 2 cut(s) 137, 913
Eco24I GRGCYC 1 cut(s) 748
Eco31I GGTCTC 1 cut(s) 774
Eco47I GGWCC 4 cut(s) 172, 352, 554, 787
Eco52I CGGCCG 1 cut(s) 347
Eco72I CACGTG 2 cut(s) 225, 235
EcoO109I RGGNCCY 2 cut(s) 71, 787
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 4 cut(s) 132, 475, 550, 783
EcoT14I CCWWGG 3 cut(s) 138, 734, 813
EcoT38I GRGCYC 1 cut(s) 748
ErhI CCWWGG 3 cut(s) 138, 734, 813
FaeI CATG 3 cut(s) 49, 460, 941
FalI AAGNNNNNCTT 2 cut(s) 659, 691
FatI CATG 3 cut(s) 45, 456, 937
FauI CCCGC 1 cut(s) 211
Fnu4HI GCNGC 4 cut(s) 144, 181, 273, 854
FokI GGATG 7 cut(s) 74, 275, 458, 534, 576, 647, 920
FriOI GRGCYC 1 cut(s) 748
Fsp4HI GCNGC 4 cut(s) 144, 181, 273, 854
FspBI CTAG 3 cut(s) 396, 791, 958
GlaI GCGC 3 cut(s) 160, 201, 255
GluI GCNGC 4 cut(s) 144, 181, 273, 854
GsuI CTGGAG 2 cut(s) 139, 579
HaeII RGCGCY 1 cut(s) 257
HaeIII GGCC 6 cut(s) 72, 137, 143, 349, 891, 913
HapII CCGG 4 cut(s) 101, 170, 350, 355
HgaI GACGC 1 cut(s) 206
HhaI GCGC 3 cut(s) 161, 202, 256
Hin1II CATG 3 cut(s) 49, 460, 941
Hin6I GCGC 3 cut(s) 159, 200, 254
HinP1I GCGC 3 cut(s) 159, 200, 254
HincII GTYRAC 3 cut(s) 34, 373, 643
HindII GTYRAC 3 cut(s) 34, 373, 643
HpaI GTTAAC 1 cut(s) 643
HpaII CCGG 4 cut(s) 101, 170, 350, 355
Hpy166II GTNNAC 5 cut(s) 34, 373, 557, 643, 929
Hpy188I TCNGA 3 cut(s) 408, 631, 750
Hpy188III TCNNGA 7 cut(s) 281, 470, 535, 596, 664, 841, 949
Hpy8I GTNNAC 5 cut(s) 34, 373, 557, 643, 929
Hpy99I CGWCG 1 cut(s) 200
HpyAV CCTTC 4 cut(s) 280, 520, 664, 875
HpyCH4III ACNGT 2 cut(s) 25, 95
HpyCH4IV ACGT 3 cut(s) 51, 224, 234
HpyCH4V TGCA 4 cut(s) 49, 462, 515, 731
HpyF10VI GCNNNNNNNGC 6 cut(s) 143, 186, 225, 272, 323, 497
HpyF3I CTNAG 2 cut(s) 405, 630
HpySE526I ACGT 3 cut(s) 51, 224, 234
Hsp92II CATG 3 cut(s) 49, 460, 941
HspAI GCGC 3 cut(s) 159, 200, 254
KspAI GTTAAC 1 cut(s) 643
KspI CCGCGG 2 cut(s) 147, 181
Kzo9I GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
LmnI GCTCC 3 cut(s) 103, 607, 809
LweI GCATC 2 cut(s) 253, 589
MaeI CTAG 3 cut(s) 396, 791, 958
MaeII ACGT 3 cut(s) 51, 224, 234
MalI GATC 7 cut(s) 41, 80, 210, 246, 279, 323, 506
MboI GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
MboII GAAGA 6 cut(s) 76, 424, 652, 679, 875, 917
MhlI GDGCHC 3 cut(s) 18, 306, 748
MlsI TGGCCA 1 cut(s) 891
MluCI AATT 5 cut(s) 494, 530, 606, 799, 921
MluNI TGGCCA 1 cut(s) 891
MmeI TCCRAC 1 cut(s) 240
MnlI CCTC 9 cut(s) 92, 114, 185, 239, 402, 414, 603, 625, 859
Mox20I TGGCCA 1 cut(s) 891
MroXI GAANNNNTTC 3 cut(s) 290, 530, 674
MscI TGGCCA 1 cut(s) 891
MseI TTAA 4 cut(s) 360, 642, 765, 900
MslI CAYNNNNRTG 2 cut(s) 831, 936
Msp20I TGGCCA 1 cut(s) 891
MspA1I CMGCKG 2 cut(s) 146, 180
MspI CCGG 4 cut(s) 101, 170, 350, 355
MspR9I CCNGG 7 cut(s) 101, 134, 170, 356, 477, 552, 785
MvaI CCWGG 4 cut(s) 134, 477, 552, 785
MvnI CGCG 4 cut(s) 146, 159, 180, 200
MwoI GCNNNNNNNGC 6 cut(s) 143, 186, 225, 272, 323, 497
NciI CCSGG 3 cut(s) 101, 170, 356
NdeII GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
NlaIII CATG 3 cut(s) 49, 460, 941
NlaIV GGNNCC 4 cut(s) 73, 125, 474, 811
NspI RCATGY 2 cut(s) 49, 460
OliI CACNNNNGTG 1 cut(s) 831
PceI AGGCCT 2 cut(s) 137, 913
PciI ACATGT 1 cut(s) 456
PcsI WCGNNNNNNNCGW 3 cut(s) 204, 221, 240
PdmI GAANNNNTTC 3 cut(s) 290, 530, 674
PflMI CCANNNNNTGG 1 cut(s) 139
PfoI TCCNGGA 1 cut(s) 99
PkrI GCNGC 4 cut(s) 145, 182, 274, 855
PmaCI CACGTG 2 cut(s) 225, 235
PmlI CACGTG 2 cut(s) 225, 235
Ppu21I YACGTR 3 cut(s) 52, 225, 235
PpuMI RGGWCCY 1 cut(s) 787
PscI ACATGT 1 cut(s) 456
PsiI TTATAA 1 cut(s) 798
Psp5II RGGWCCY 1 cut(s) 787
Psp6I CCWGG 4 cut(s) 132, 475, 550, 783
PspCI CACGTG 2 cut(s) 225, 235
PspGI CCWGG 4 cut(s) 132, 475, 550, 783
PspN4I GGNNCC 4 cut(s) 73, 125, 474, 811
PspPI GGNCC 5 cut(s) 71, 172, 352, 554, 787
PspPPI RGGWCCY 1 cut(s) 787
PstNI CAGNNNCTG 1 cut(s) 717
RsaI GTAC 2 cut(s) 113, 511
RsaNI GTAC 2 cut(s) 112, 510
RseI CAYNNNNRTG 2 cut(s) 831, 936
Rsr2I CGGWCCG 1 cut(s) 352
RsrII CGGWCCG 1 cut(s) 352
SacII CCGCGG 2 cut(s) 147, 181
SaqAI TTAA 4 cut(s) 360, 642, 765, 900
SatI GCNGC 4 cut(s) 144, 181, 273, 854
Sau3AI GATC 7 cut(s) 39, 78, 208, 244, 277, 321, 504
Sau96I GGNCC 5 cut(s) 71, 172, 352, 554, 787
ScrFI CCNGG 7 cut(s) 101, 134, 170, 356, 477, 552, 785
SduI GDGCHC 3 cut(s) 18, 306, 748
SfaNI GCATC 2 cut(s) 253, 589
SfcI CTRYAG 1 cut(s) 267
Sfr303I CCGCGG 2 cut(s) 147, 181
SgrBI CCGCGG 2 cut(s) 147, 181
SinI GGWCC 4 cut(s) 172, 352, 554, 787
SmiMI CAYNNNNRTG 2 cut(s) 831, 936
SmlI CTYRAG 1 cut(s) 376
SmoI CTYRAG 1 cut(s) 376
Sse9I AATT 5 cut(s) 494, 530, 606, 799, 921
SseBI AGGCCT 2 cut(s) 137, 913
SsiI CCGC 9 cut(s) 144, 146, 157, 178, 180, 204, 272, 275, 854
SspMI CTAG 3 cut(s) 396, 791, 958
StuI AGGCCT 2 cut(s) 137, 913
StyD4I CCNGG 7 cut(s) 99, 132, 168, 354, 475, 550, 783
StyI CCWWGG 3 cut(s) 138, 734, 813
TaaI ACNGT 2 cut(s) 25, 95
TaiI ACGT 3 cut(s) 54, 227, 237
TaqI TCGA 4 cut(s) 215, 586, 663, 700
TasI AATT 5 cut(s) 494, 530, 606, 799, 921
TauI GCSGC 4 cut(s) 146, 183, 275, 856
Tru1I TTAA 4 cut(s) 360, 642, 765, 900
Tru9I TTAA 4 cut(s) 360, 642, 765, 900
TscAI CASTG 1 cut(s) 685
TspDTI ATGAA 6 cut(s) 76, 539, 760, 811, 933, 934
TspRI CASTG 1 cut(s) 685
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 4 cut(s) 172, 352, 554, 787
XapI RAATTY 2 cut(s) 494, 530
XceI RCATGY 2 cut(s) 49, 460
XmnI GAANNNNTTC 3 cut(s) 290, 530, 674
XspI CTAG 3 cut(s) 396, 791, 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.