Rorug04G0185900

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
32322357 .. 32323854
1498 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0185900.1

Sequence Viewer

Length: 1341 bp
ATGTCAAAGTCCGTTGCTTGTGTAATGCTTGCAACCAGCCTTGCATATACCGCTACAATTGTTCCATATGTGATTTCAACCTTCACCTTAAATGTGCCTCCAATTGGGAAAACATTATTGGAAATGCCTCTCACGAGCATCAGTTCATTGTGCTACCCATGGAATTGGCTGACCTCCATATCAATTGTCACATTTGTGGTGACTACTGGAATGGCAGCGCCTACTATATCTGTAGCATTTGCCAACTCTTGGTCCATCAGGAATTGGCTATGTTTCCCACACTACGTTGAGTATTTTCGGGAAGAAGAAAACCCAAACAGATTCTCTGCTGATGATGATGAGGAGTTCGATGATGATGGGCAAATAGAGCACTTCAGTCATCAACATTTGTTACTCGTTAATGATCATCGTGAGCTGGTTCAAGATGAGAGGACAATTACTTGTGAGGGTTGCATTCGACCCATCAATACCATCACTGAAACCTTTTACAGCTGTACGAACCAAGAACAGTCGTGCCATTTCTTTCTCCACGATATCTGTGCTCGATTACCAGCAAAGATGTTTATCCCACTCCTTCACTCACATGTGTTCACACTCCTTTCTCGTGCTCATTCTTTTGACGGCGTGTTTCAGTGTTTTATGTGTAGTATCTTTAATCAAGGCTTTGTATACAGTTGTCAGGAATGTGCTTCTCCAGCAGGCGACAATCTTTTCTACCTTGACGTTGAGTGCAGTATGTATTGGAGGGACAAGACTCTTAAACATGAGTCTCATGCTCACCAGCTCCTTCTATGTACAGAATGGGAGGACGTCTATTGCAGGGGTTGTGGTTCCAATATATTTTTCTGCTTTAGTTGTAAGAAATGCAACTACCATCTTTGTATTTCGTGTGTCAAATTACCTCTTACTGGTAGGCACCGATACGACGAGCATCCTCTCAAGCTCACCTATGCTAGTGCTGAAGACGAGCTAGGTGAATATTATTGTGAAGTATGTGAAGGGACAAGAAATCCAGCACATTGGTTCTACGAGTGCAAAGACTGTGAGTTTGATTGTCATCCTCATTGCATTCTGGGGAGGTATCCGTATGTTAAGCTAGGGAGCACTTACAAGCATGATGCTCATGCAGCACACCACGTCACTCTTGTTAGTAAGTGGAAGAGCCCCATTCGGCTGGATAAGAGAGACAACATTCTTCCTTGTGAGAAGTGTGGTATACTTTGCAAGGGATTGGTCTTTGAATGCAAAGAGTGCAATATAAATTTTCACCGAGACGGATGTTGCGGGACTATAGATTTGGAAAGTTCTCGAACGTCTCCTCAGATCCAAGAGCTAAGTTAG

Protein Analysis

446

Amino Acids

51.24

Weight (kDa)

5.69

Isoelectric Point (pI)

48.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 307 - 357 4.2e-08 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 813
AccB1I GGYRCC 1 cut(s) 915
AccB7I CCANNNNNTGG 1 cut(s) 249
AccI GTMKAC 2 cut(s) 669, 1216
AciI CCGC 2 cut(s) 51, 1284
AclWI GGATC 1 cut(s) 1318
AcsI RAATTY 1 cut(s) 1261
AcuI CTGAAG 2 cut(s) 358, 981
AcyI GRCGYC 1 cut(s) 810
AfaI GTAC 2 cut(s) 496, 796
AfiI CCNNNNNNNGG 3 cut(s) 104, 249, 908
AflIII ACRYGT 1 cut(s) 583
AgsI TTSAA 3 cut(s) 78, 422, 1241
AjiI CACGTC 1 cut(s) 1138
AjuI GAANNNNNNNTTGG 4 cut(s) 101, 133, 827, 859
AleI CACNNNNGTG 1 cut(s) 194
AluBI AGCT 7 cut(s) 415, 492, 784, 943, 970, 1096, 1333
AluI AGCT 7 cut(s) 415, 492, 784, 943, 970, 1096, 1333
Alw21I GWGCWC 4 cut(s) 372, 544, 610, 1106
Alw26I GTCTC 4 cut(s) 774, 1179, 1266, 1320
AlwI GGATC 1 cut(s) 1318
ApeKI GCWGC 2 cut(s) 215, 1127
ApoI RAATTY 1 cut(s) 1261
ArsI GACNNNNNNTTYG 4 cut(s) 1031, 1063, 1279, 1311
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 1 cut(s) 252
AsuHPI GGTGA 6 cut(s) 76, 211, 770, 937, 986, 1259
AvaII GGWCC 1 cut(s) 252
BanI GGYRCC 1 cut(s) 915
BanII GRGCYC 1 cut(s) 1166
BauI CACGAG 2 cut(s) 133, 603
BbsI GAAGAC 1 cut(s) 969
Bbv12I GWGCWC 4 cut(s) 372, 544, 610, 1106
BbvI GCAGC 2 cut(s) 227, 1139
BccI CCATC 5 cut(s) 263, 350, 470, 479, 882
BceAI ACGGC 1 cut(s) 637
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciVI GTATCC 1 cut(s) 1092
BclI TGATCA 1 cut(s) 403
BcoDI GTCTC 4 cut(s) 774, 1179, 1266, 1320
BfaI CTAG 3 cut(s) 954, 971, 1097
BfmI CTRYAG 2 cut(s) 231, 1290
BfoI RGCGCY 1 cut(s) 221
BfuI GTATCC 1 cut(s) 1092
BisI GCNGC 2 cut(s) 216, 1128
BlsI GCNGC 2 cut(s) 217, 1129
Bme18I GGWCC 1 cut(s) 252
BmgBI CACGTC 1 cut(s) 1138
BmgT120I GGNCC 1 cut(s) 252
BmiI GGNNCC 2 cut(s) 832, 917
BmsI GCATC 3 cut(s) 147, 940, 1108
BpiI GAAGAC 1 cut(s) 969
BpmI CTGGAG 1 cut(s) 678
BpuEI CTTGAG 1 cut(s) 923
BsaBI GATNNNNATC 2 cut(s) 563, 1056
BsaHI GRCGYC 1 cut(s) 810
BsaJI CCNNGG 1 cut(s) 158
Bsc4I CCNNNNNNNGG 3 cut(s) 104, 249, 908
Bse1I ACTGG 2 cut(s) 211, 913
Bse3DI GCAATG 1 cut(s) 1063
Bse8I GATNNNNATC 2 cut(s) 563, 1056
BseDI CCNNGG 1 cut(s) 158
BseGI GGATG 3 cut(s) 931, 1057, 1283
BseJI GATNNNNATC 2 cut(s) 563, 1056
BseLI CCNNNNNNNGG 3 cut(s) 104, 249, 908
BseMI GCAATG 1 cut(s) 1063
BseMII CTCAG 1 cut(s) 1334
BseNI ACTGG 2 cut(s) 211, 913
BseRI GAGGAG 2 cut(s) 356, 1308
BseXI GCAGC 2 cut(s) 227, 1139
BsgI GTGCAG 1 cut(s) 751
BshNI GGYRCC 1 cut(s) 915
BsiHKAI GWGCWC 4 cut(s) 372, 544, 610, 1106
BslFI GGGAC 3 cut(s) 761, 1015, 1300
BslI CCNNNNNNNGG 3 cut(s) 104, 249, 908
BsmAI GTCTC 4 cut(s) 774, 1179, 1266, 1320
BsmBI CGTCTC 2 cut(s) 1266, 1320
BsmFI GGGAC 3 cut(s) 761, 1015, 1300
BsmI GAATGC 3 cut(s) 453, 1068, 1247
Bsp1286I GDGCHC 5 cut(s) 372, 544, 610, 1106, 1166
Bsp1407I TGTACA 1 cut(s) 794
Bsp143I GATC 2 cut(s) 403, 1323
Bsp19I CCATGG 1 cut(s) 158
BspACI CCGC 2 cut(s) 51, 1284
BspCNI CTCAG 1 cut(s) 1333
BspLI GGNNCC 2 cut(s) 832, 917
BspPI GGATC 1 cut(s) 1318
BspQI GCTCTTC 1 cut(s) 1154
BspT107I GGYRCC 1 cut(s) 915
BsrDI GCAATG 1 cut(s) 1063
BsrGI TGTACA 1 cut(s) 794
BsrI ACTGG 2 cut(s) 211, 913
BssECI CCNNGG 1 cut(s) 158
BssMI GATC 2 cut(s) 403, 1323
BssNAI GTATAC 2 cut(s) 670, 1217
BssNI GRCGYC 1 cut(s) 810
BssSI CACGAG 2 cut(s) 133, 603
BssT1I CCWWGG 1 cut(s) 158
Bst1107I GTATAC 2 cut(s) 670, 1217
Bst2BI CACGAG 2 cut(s) 133, 603
Bst4CI ACNGT 3 cut(s) 510, 674, 1043
Bst6I CTCTTC 1 cut(s) 1154
BstACI GRCGYC 1 cut(s) 810
BstAPI GCANNNNNTGC 1 cut(s) 1251
BstAUI TGTACA 1 cut(s) 794
BstC8I GCNNGC 2 cut(s) 30, 700
BstDEI CTNAG 2 cut(s) 1320, 1334
BstDSI CCRYGG 1 cut(s) 158
BstF5I GGATG 3 cut(s) 931, 1057, 1283
BstH2I RGCGCY 1 cut(s) 221
BstHHI GCGC 1 cut(s) 220
BstKTI GATC 2 cut(s) 406, 1326
BstMAI GTCTC 4 cut(s) 774, 1179, 1266, 1320
BstMBI GATC 2 cut(s) 403, 1323
BstMWI GCNNNNNNNGC 5 cut(s) 50, 367, 695, 1127, 1251
BstNSI RCATGY 1 cut(s) 587
BstSFI CTRYAG 2 cut(s) 231, 1290
BstV1I GCAGC 2 cut(s) 227, 1139
BstV2I GAAGAC 1 cut(s) 969
BstX2I RGATCY 1 cut(s) 1323
BstXI CCANNNNNNTGG 3 cut(s) 165, 1020, 1174
BstYI RGATCY 1 cut(s) 1323
BstZ17I GTATAC 2 cut(s) 670, 1217
BsuI GTATCC 1 cut(s) 1092
BtgI CCRYGG 1 cut(s) 158
BtrI CACGTC 1 cut(s) 1138
BtsCI GGATG 3 cut(s) 931, 1057, 1283
BtsIMutI CAGTG 2 cut(s) 474, 638
Cac8I GCNNGC 2 cut(s) 30, 700
CfoI GCGC 1 cut(s) 220
Cfr13I GGNCC 1 cut(s) 252
Csp6I GTAC 2 cut(s) 495, 795
CviAII CATG 6 cut(s) 159, 584, 764, 773, 1115, 1124
CviQI GTAC 2 cut(s) 495, 795
DdeI CTNAG 2 cut(s) 1320, 1334
DpnI GATC 2 cut(s) 405, 1325
DpnII GATC 2 cut(s) 403, 1323
Eam1104I CTCTTC 1 cut(s) 1154
EarI CTCTTC 1 cut(s) 1154
Eco130I CCWWGG 1 cut(s) 158
Eco24I GRGCYC 1 cut(s) 1166
Eco32I GATATC 1 cut(s) 535
Eco47I GGWCC 1 cut(s) 252
Eco57I CTGAAG 2 cut(s) 358, 981
EcoRV GATATC 1 cut(s) 535
EcoT14I CCWWGG 1 cut(s) 158
EcoT38I GRGCYC 1 cut(s) 1166
ErhI CCWWGG 1 cut(s) 158
Esp3I CGTCTC 2 cut(s) 1266, 1320
FaeI CATG 6 cut(s) 162, 587, 767, 776, 1118, 1127
FaqI GGGAC 3 cut(s) 761, 1015, 1300
FatI CATG 6 cut(s) 158, 583, 763, 772, 1114, 1123
FauI CCCGC 1 cut(s) 1277
FauNDI CATATG 1 cut(s) 67
FbaI TGATCA 1 cut(s) 403
FblI GTMKAC 2 cut(s) 669, 1216
Fnu4HI GCNGC 2 cut(s) 216, 1128
FokI GGATG 3 cut(s) 918, 1044, 1290
FriOI GRGCYC 1 cut(s) 1166
Fsp4HI GCNGC 2 cut(s) 216, 1128
FspBI CTAG 3 cut(s) 954, 971, 1097
GlaI GCGC 1 cut(s) 219
GluI GCNGC 2 cut(s) 216, 1128
GsuI CTGGAG 1 cut(s) 678
HaeII RGCGCY 1 cut(s) 221
HhaI GCGC 1 cut(s) 220
Hin1I GRCGYC 1 cut(s) 810
Hin1II CATG 6 cut(s) 162, 587, 767, 776, 1118, 1127
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HinfI GANTC 3 cut(s) 321, 754, 767
HphI GGTGA 6 cut(s) 76, 211, 770, 937, 986, 1259
Hpy166II GTNNAC 3 cut(s) 591, 670, 1217
Hpy188I TCNGA 1 cut(s) 1323
Hpy188III TCNNGA 7 cut(s) 133, 259, 299, 410, 422, 680, 1308
Hpy8I GTNNAC 3 cut(s) 591, 670, 1217
Hpy99I CGWCG 1 cut(s) 929
HpyAV CCTTC 4 cut(s) 91, 584, 797, 992
HpyCH4III ACNGT 3 cut(s) 510, 674, 1043
HpyCH4IV ACGT 5 cut(s) 285, 723, 810, 1137, 1313
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 367, 695, 1127, 1251
HpyF3I CTNAG 2 cut(s) 1320, 1334
HpySE526I ACGT 5 cut(s) 285, 723, 810, 1137, 1313
Hsp92I GRCGYC 1 cut(s) 810
Hsp92II CATG 6 cut(s) 162, 587, 767, 776, 1118, 1127
HspAI GCGC 1 cut(s) 218
Ksp22I TGATCA 1 cut(s) 403
Kzo9I GATC 2 cut(s) 403, 1323
LguI GCTCTTC 1 cut(s) 1154
LmnI GCTCC 2 cut(s) 789, 1101
Lsp1109I GCAGC 2 cut(s) 227, 1139
LweI GCATC 3 cut(s) 147, 940, 1108
MaeI CTAG 3 cut(s) 954, 971, 1097
MaeII ACGT 5 cut(s) 285, 723, 810, 1137, 1313
MaeIII GTNAC 4 cut(s) 187, 199, 390, 1138
MalI GATC 2 cut(s) 405, 1325
MboI GATC 2 cut(s) 403, 1323
MboII GAAGA 5 cut(s) 314, 317, 974, 1171, 1187
MfeI CAATTG 3 cut(s) 57, 102, 183
MflI RGATCY 1 cut(s) 1323
MhlI GDGCHC 5 cut(s) 372, 544, 610, 1106, 1166
MluCI AATT 8 cut(s) 57, 102, 163, 183, 262, 435, 896, 1261
MlyI GAGTC 2 cut(s) 748, 776
MseI TTAA 5 cut(s) 89, 399, 654, 759, 1092
MslI CAYNNNNRTG 2 cut(s) 194, 582
MspA1I CMGCKG 1 cut(s) 492
MunI CAATTG 3 cut(s) 57, 102, 183
Mva1269I GAATGC 3 cut(s) 453, 1068, 1247
MwoI GCNNNNNNNGC 5 cut(s) 50, 367, 695, 1127, 1251
NcoI CCATGG 1 cut(s) 158
NdeI CATATG 1 cut(s) 67
NdeII GATC 2 cut(s) 403, 1323
NlaIII CATG 6 cut(s) 162, 587, 767, 776, 1118, 1127
NlaIV GGNNCC 2 cut(s) 832, 917
NmuCI GTSAC 3 cut(s) 187, 199, 1138
NspI RCATGY 1 cut(s) 587
OliI CACNNNNGTG 1 cut(s) 194
PciI ACATGT 1 cut(s) 583
PciSI GCTCTTC 1 cut(s) 1154
PctI GAATGC 3 cut(s) 453, 1068, 1247
PfeI GAWTC 1 cut(s) 321
PflMI CCANNNNNTGG 1 cut(s) 249
PkrI GCNGC 2 cut(s) 217, 1129
PleI GAGTC 2 cut(s) 748, 775
PpsI GAGTC 2 cut(s) 748, 775
PscI ACATGT 1 cut(s) 583
PspN4I GGNNCC 2 cut(s) 832, 917
PspPI GGNCC 1 cut(s) 252
PsuI RGATCY 1 cut(s) 1323
PvuII CAGCTG 1 cut(s) 492
RsaI GTAC 2 cut(s) 496, 796
RsaNI GTAC 2 cut(s) 495, 795
RseI CAYNNNNRTG 2 cut(s) 194, 582
SapI GCTCTTC 1 cut(s) 1154
SaqAI TTAA 5 cut(s) 89, 399, 654, 759, 1092
SatI GCNGC 2 cut(s) 216, 1128
Sau3AI GATC 2 cut(s) 403, 1323
Sau96I GGNCC 1 cut(s) 252
SchI GAGTC 2 cut(s) 748, 776
SduI GDGCHC 5 cut(s) 372, 544, 610, 1106, 1166
SfaNI GCATC 3 cut(s) 147, 940, 1108
SfcI CTRYAG 2 cut(s) 231, 1290
SinI GGWCC 1 cut(s) 252
SmiMI CAYNNNNRTG 2 cut(s) 194, 582
SmlI CTYRAG 1 cut(s) 938
SmoI CTYRAG 1 cut(s) 938
Sse9I AATT 8 cut(s) 57, 102, 163, 183, 262, 435, 896, 1261
SsiI CCGC 2 cut(s) 51, 1284
SspI AATATT 1 cut(s) 980
SspMI CTAG 3 cut(s) 954, 971, 1097
StyI CCWWGG 1 cut(s) 158
TaaI ACNGT 3 cut(s) 510, 674, 1043
TaiI ACGT 5 cut(s) 288, 726, 813, 1140, 1316
TaqI TCGA 4 cut(s) 348, 457, 544, 1309
TasI AATT 8 cut(s) 57, 102, 163, 183, 262, 435, 896, 1261
TatI WGTACW 1 cut(s) 794
TfiI GAWTC 1 cut(s) 321
Tru1I TTAA 5 cut(s) 89, 399, 654, 759, 1092
Tru9I TTAA 5 cut(s) 89, 399, 654, 759, 1092
TscAI CASTG 2 cut(s) 481, 638
TseFI GTSAC 3 cut(s) 187, 199, 1138
TseI GCWGC 2 cut(s) 215, 1127
Tsp45I GTSAC 3 cut(s) 187, 199, 1138
TspDTI ATGAA 1 cut(s) 135
TspGWI ACGGA 2 cut(s) 1074, 1290
TspRI CASTG 2 cut(s) 481, 638
Van91I CCANNNNNTGG 1 cut(s) 249
VpaK11BI GGWCC 1 cut(s) 252
XapI RAATTY 1 cut(s) 1261
XceI RCATGY 1 cut(s) 587
XmiI GTMKAC 2 cut(s) 669, 1216
XspI CTAG 3 cut(s) 954, 971, 1097
ZraI GACGTC 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.