MD16G1165000.v1.1

Bifunctional epoxide hydrolase 2-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Reverse (-)
13678725 .. 13682672
3948 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1165000.v1.1.491

Sequence Viewer

Length: 969 bp
ATGGAGTCGCAGGGAATAGAGCACCGAACAGTCCAAGTGAACGGCATCAACATGCACGTCGCCGAGAAAGGGAATGGCCCACTCATCCTCTTCGTCCACGGCTTTCCTGAGCTCTGGTACTCCTGGCGCCACCAAATCCTCGCCCTCTCCGCCCTCGGCTACCGCGCTGTCGCCCCCGACCTCCGAGGGTACGGCGATACCGACGCCCCCGCCTCCCCTTCCAGCTACAACTGCCTCTACATGGTCGGAGACCTCGTGGCGCTCCTGGACGCCATCGCACCTGATCAGGAGCAGGTGTTCGTGGTGGCCCACGACTGGGGCGCCACCATCGCTTGGTACCTCTGCCTGCTCCGGCCCGACCGGGTCAAAGCCTTGGTCAGCTTGAGCGTGCAGTTCATGCCGCGAAACCCTCAGAGGAAGGTCATCGAATCGCTTCAAGCTGCTTATGGCGATGACTACTACATCTGCAGATTTCAGGAGCCAGGAGTGATAGAAGCTGAGTTTGCTCAGATGGGCACTACAAGAGTTATCAAGGAGTTTCTAACATATAGGAATCCTGGTCCACTTTTCCTGCCTAAAGGCAAAGGATTTGGACATCCCACAAATACTCCTATTGTCTTGCCAAGTTGGTTGTCTGAGGATGAAGTGAACTACTACGCCGCCAAATTTGACAAGACGGGCTTCACTGGCGGCATAAACTACTACCGGAATTTGGACATAAATTGGGAACTGACCGCACCATGGACTGGGGCTCAAGTGAAAGTTCCGGTGAAGTTTGTTGTGGGAGACCAGGACCTAGTTTACAACTCTCGAGGTGCTCAGGACTTCATACACAAGGGCGGGTTCAAGAAATTTGTGCCGCTTCTGGAAGAAGTAGTTGTATTGGAAGGAGTTGCCCATTTTCTGCAACAAGAAAAGCCTGATGAAATCAGCAAACACATTCACGACTTCATTAAGAACTTCCATTAG

Protein Analysis

323

Amino Acids

36.33

Weight (kDa)

5.88

Isoelectric Point (pI)

35.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 27 - 307 5.4e-26 alpha/beta hydrolase fold
Hydrolase_4 PF12146 28 - 142 1.5e-11 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 29 - 310 1.8e-19 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 283
Acc36I ACCTGC 1 cut(s) 283
Acc65I GGTACC 1 cut(s) 336
AccB1I GGYRCC 3 cut(s) 126, 320, 336
AccB7I CCANNNNNTGG 2 cut(s) 333, 746
AccII CGCG 2 cut(s) 165, 403
AciI CCGC 9 cut(s) 150, 163, 210, 401, 660, 690, 735, 840, 860
AcsI RAATTY 3 cut(s) 665, 709, 851
AcyI GRCGYC 4 cut(s) 127, 204, 270, 321
AfaI GTAC 3 cut(s) 119, 191, 338
AfiI CCNNNNNNNGG 8 cut(s) 69, 241, 315, 316, 333, 712, 741, 746
AgsI TTSAA 2 cut(s) 437, 847
AjiI CACGTC 1 cut(s) 58
AjnI CCWGG 5 cut(s) 122, 264, 481, 556, 789
AloI GAACNNNNNNTCC 2 cut(s) 281, 313
AluBI AGCT 5 cut(s) 112, 225, 381, 440, 497
AluI AGCT 5 cut(s) 112, 225, 381, 440, 497
Alw21I GWGCWC 3 cut(s) 24, 114, 820
Alw26I GTCTC 2 cut(s) 243, 780
Ama87I CYCGRG 1 cut(s) 810
AoxI GGCC 3 cut(s) 76, 306, 353
ApeKI GCWGC 1 cut(s) 440
ApoI RAATTY 3 cut(s) 665, 709, 851
ArsI GACNNNNNNTTYG 2 cut(s) 360, 392
Asp700I GAANNNNTTC 1 cut(s) 432
Asp718I GGTACC 1 cut(s) 336
AspLEI GCGC 4 cut(s) 129, 167, 262, 323
AspS9I GGNCC 5 cut(s) 77, 307, 354, 560, 793
AsuC2I CCSGG 1 cut(s) 362
AsuHPI GGTGA 1 cut(s) 781
AvaI CYCGRG 1 cut(s) 810
AvaII GGWCC 2 cut(s) 560, 793
BaeGI GKGCMC 1 cut(s) 518
BanI GGYRCC 3 cut(s) 126, 320, 336
BanII GRGCYC 2 cut(s) 114, 754
BauI CACGAG 1 cut(s) 254
Bbv12I GWGCWC 3 cut(s) 24, 114, 820
BbvI GCAGC 1 cut(s) 427
BccI CCATC 3 cut(s) 281, 335, 505
BceAI ACGGC 3 cut(s) 58, 115, 208
BciT130I CCWGG 5 cut(s) 124, 266, 483, 558, 791
BclI TGATCA 1 cut(s) 283
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 2 cut(s) 243, 780
BfaI CTAG 1 cut(s) 797
BfmI CTRYAG 1 cut(s) 466
BfoI RGCGCY 3 cut(s) 130, 263, 324
BfuAI ACCTGC 1 cut(s) 283
BisI GCNGC 5 cut(s) 401, 441, 660, 691, 860
BlsI GCNGC 5 cut(s) 402, 442, 661, 692, 861
Bme1390I CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
Bme18I GGWCC 2 cut(s) 560, 793
BmeT110I CYCGRG 1 cut(s) 810
BmgBI CACGTC 1 cut(s) 58
BmgT120I GGNCC 5 cut(s) 77, 307, 354, 560, 793
BmiI GGNNCC 4 cut(s) 128, 322, 338, 480
BmrFI CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
BmrI ACTGGG 2 cut(s) 325, 756
BmsI GCATC 1 cut(s) 54
BmuI ACTGGG 2 cut(s) 325, 756
Bpu10I CCTNAGC 2 cut(s) 108, 819
BpuEI CTTGAG 2 cut(s) 403, 738
BpuMI CCSGG 1 cut(s) 362
BsaHI GRCGYC 4 cut(s) 127, 204, 270, 321
BsaI GGTCTC 2 cut(s) 243, 780
BsaJI CCNNGG 5 cut(s) 97, 154, 184, 372, 740
BsaWI WCCGGW 2 cut(s) 705, 766
BsaXI ACNNNNNCTCC 6 cut(s) 240, 270, 281, 311, 592, 622
Bsc4I CCNNNNNNNGG 8 cut(s) 69, 241, 315, 316, 333, 712, 741, 746
Bse1I ACTGG 3 cut(s) 320, 691, 751
BseBI CCWGG 5 cut(s) 124, 266, 483, 558, 791
BseDI CCNNGG 5 cut(s) 97, 154, 184, 372, 740
BseGI GGATG 3 cut(s) 84, 595, 646
BseLI CCNNNNNNNGG 8 cut(s) 69, 241, 315, 316, 333, 712, 741, 746
BseMII CTCAG 6 cut(s) 99, 425, 489, 521, 627, 833
BseNI ACTGG 3 cut(s) 320, 691, 751
BseSI GKGCMC 1 cut(s) 518
BseXI GCAGC 1 cut(s) 427
BsgI GTGCAG 1 cut(s) 410
Bsh1236I CGCG 2 cut(s) 165, 403
Bsh1285I CGRYCG 1 cut(s) 361
BshFI GGCC 3 cut(s) 78, 308, 355
BshNI GGYRCC 3 cut(s) 126, 320, 336
BsiEI CGRYCG 1 cut(s) 361
BsiHKAI GWGCWC 3 cut(s) 24, 114, 820
BsiHKCI CYCGRG 1 cut(s) 810
BsiSI CCGG 4 cut(s) 352, 361, 706, 767
BslI CCNNNNNNNGG 8 cut(s) 69, 241, 315, 316, 333, 712, 741, 746
BsmAI GTCTC 2 cut(s) 243, 780
BsnI GGCC 3 cut(s) 78, 308, 355
Bso31I GGTCTC 2 cut(s) 243, 780
BsoBI CYCGRG 1 cut(s) 810
Bsp1286I GDGCHC 5 cut(s) 24, 114, 518, 754, 820
Bsp143I GATC 1 cut(s) 283
Bsp19I CCATGG 1 cut(s) 740
BspACI CCGC 9 cut(s) 150, 163, 210, 401, 660, 690, 735, 840, 860
BspANI GGCC 3 cut(s) 78, 308, 355
BspCNI CTCAG 6 cut(s) 100, 424, 490, 520, 628, 832
BspFNI CGCG 2 cut(s) 165, 403
BspLI GGNNCC 4 cut(s) 128, 322, 338, 480
BspMAI CTGCAG 1 cut(s) 470
BspMI ACCTGC 1 cut(s) 283
BspT107I GGYRCC 3 cut(s) 126, 320, 336
BspTNI GGTCTC 2 cut(s) 243, 780
BsrI ACTGG 3 cut(s) 320, 691, 751
BssECI CCNNGG 5 cut(s) 97, 154, 184, 372, 740
BssMI GATC 1 cut(s) 283
BssNI GRCGYC 4 cut(s) 127, 204, 270, 321
BssSI CACGAG 1 cut(s) 254
BssT1I CCWWGG 2 cut(s) 372, 740
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 5 cut(s) 124, 266, 483, 558, 791
Bst4CI ACNGT 1 cut(s) 31
Bst6I CTCTTC 1 cut(s) 95
BstACI GRCGYC 4 cut(s) 127, 204, 270, 321
BstAPI GCANNNNNTGC 1 cut(s) 397
BstC8I GCNNGC 2 cut(s) 347, 389
BstDEI CTNAG 6 cut(s) 108, 411, 498, 507, 636, 819
BstDSI CCRYGG 2 cut(s) 97, 740
BstF5I GGATG 3 cut(s) 84, 595, 646
BstFNI CGCG 2 cut(s) 165, 403
BstH2I RGCGCY 3 cut(s) 130, 263, 324
BstHHI GCGC 4 cut(s) 129, 167, 262, 323
BstKTI GATC 1 cut(s) 286
BstMAI GTCTC 2 cut(s) 243, 780
BstMBI GATC 1 cut(s) 283
BstMCI CGRYCG 1 cut(s) 361
BstMWI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
BstNI CCWGG 5 cut(s) 124, 266, 483, 558, 791
BstNSI RCATGY 1 cut(s) 55
BstSCI CCNGG 6 cut(s) 122, 264, 360, 481, 556, 789
BstSFI CTRYAG 1 cut(s) 466
BstSLI GKGCMC 1 cut(s) 518
BstUI CGCG 2 cut(s) 165, 403
BstV1I GCAGC 1 cut(s) 427
BsuRI GGCC 3 cut(s) 78, 308, 355
BtgI CCRYGG 2 cut(s) 97, 740
BtgZI GCGATG 3 cut(s) 259, 313, 465
BtrI CACGTC 1 cut(s) 58
BtsCI GGATG 3 cut(s) 84, 595, 646
BtsIMutI CAGTG 1 cut(s) 684
BveI ACCTGC 1 cut(s) 283
Cac8I GCNNGC 2 cut(s) 347, 389
CfoI GCGC 4 cut(s) 129, 167, 262, 323
Cfr13I GGNCC 5 cut(s) 77, 307, 354, 560, 793
CseI GACGC 2 cut(s) 212, 278
Csp6I GTAC 3 cut(s) 118, 190, 337
CviAII CATG 4 cut(s) 52, 241, 397, 741
CviQI GTAC 3 cut(s) 118, 190, 337
DdeI CTNAG 6 cut(s) 108, 411, 498, 507, 636, 819
DinI GGCGCC 2 cut(s) 128, 322
DpnI GATC 1 cut(s) 285
DpnII GATC 1 cut(s) 283
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EciI GGCGGA 1 cut(s) 139
Ecl136II GAGCTC 1 cut(s) 112
Eco130I CCWWGG 2 cut(s) 372, 740
Eco24I GRGCYC 2 cut(s) 114, 754
Eco31I GGTCTC 2 cut(s) 243, 780
Eco47I GGWCC 2 cut(s) 560, 793
Eco53kI GAGCTC 1 cut(s) 112
Eco88I CYCGRG 1 cut(s) 810
EcoICRI GAGCTC 1 cut(s) 112
EcoO109I RGGNCCY 1 cut(s) 793
EcoRII CCWGG 5 cut(s) 122, 264, 481, 556, 789
EcoT14I CCWWGG 2 cut(s) 372, 740
EcoT38I GRGCYC 2 cut(s) 114, 754
EgeI GGCGCC 2 cut(s) 128, 322
EheI GGCGCC 2 cut(s) 128, 322
ErhI CCWWGG 2 cut(s) 372, 740
FaeI CATG 4 cut(s) 55, 244, 400, 744
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FatI CATG 4 cut(s) 51, 240, 396, 740
FauI CCCGC 2 cut(s) 217, 833
FbaI TGATCA 1 cut(s) 283
Fnu4HI GCNGC 5 cut(s) 401, 441, 660, 691, 860
FokI GGATG 3 cut(s) 71, 582, 653
FriOI GRGCYC 2 cut(s) 114, 754
Fsp4HI GCNGC 5 cut(s) 401, 441, 660, 691, 860
FspBI CTAG 1 cut(s) 797
GlaI GCGC 4 cut(s) 128, 166, 261, 322
GluI GCNGC 5 cut(s) 401, 441, 660, 691, 860
HaeII RGCGCY 3 cut(s) 130, 263, 324
HaeIII GGCC 3 cut(s) 78, 308, 355
HapII CCGG 4 cut(s) 352, 361, 706, 767
HgaI GACGC 2 cut(s) 212, 278
HhaI GCGC 4 cut(s) 129, 167, 262, 323
Hin1I GRCGYC 4 cut(s) 127, 204, 270, 321
Hin1II CATG 4 cut(s) 55, 244, 400, 744
Hin6I GCGC 4 cut(s) 127, 165, 260, 321
HinP1I GCGC 4 cut(s) 127, 165, 260, 321
HinfI GANTC 3 cut(s) 5, 428, 553
HpaII CCGG 4 cut(s) 352, 361, 706, 767
HphI GGTGA 1 cut(s) 781
Hpy166II GTNNAC 5 cut(s) 40, 97, 563, 649, 802
Hpy188I TCNGA 5 cut(s) 185, 248, 414, 510, 637
Hpy188III TCNNGA 8 cut(s) 107, 287, 476, 810, 821, 847, 866, 944
Hpy8I GTNNAC 5 cut(s) 40, 97, 563, 649, 802
Hpy99I CGWCG 2 cut(s) 62, 206
HpyAV CCTTC 3 cut(s) 228, 412, 881
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4IV ACGT 1 cut(s) 57
HpyCH4V TGCA 4 cut(s) 55, 391, 468, 907
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
HpyF3I CTNAG 6 cut(s) 108, 411, 498, 507, 636, 819
HpySE526I ACGT 1 cut(s) 57
Hsp92I GRCGYC 4 cut(s) 127, 204, 270, 321
Hsp92II CATG 4 cut(s) 55, 244, 400, 744
HspAI GCGC 4 cut(s) 127, 165, 260, 321
KasI GGCGCC 2 cut(s) 126, 320
KpnI GGTACC 1 cut(s) 340
Ksp22I TGATCA 1 cut(s) 283
Kzo9I GATC 1 cut(s) 283
LmnI GCTCC 4 cut(s) 267, 289, 354, 478
Lsp1109I GCAGC 1 cut(s) 427
LweI GCATC 1 cut(s) 54
MaeI CTAG 1 cut(s) 797
MaeII ACGT 1 cut(s) 57
MalI GATC 1 cut(s) 285
MboI GATC 1 cut(s) 283
MboII GAAGA 2 cut(s) 82, 881
MhlI GDGCHC 5 cut(s) 24, 114, 518, 754, 820
MluCI AATT 4 cut(s) 665, 709, 721, 851
Mly113I GGCGCC 2 cut(s) 127, 321
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 226
MroXI GAANNNNTTC 1 cut(s) 432
MseI TTAA 1 cut(s) 954
MslI CAYNNNNRTG 1 cut(s) 50
MspI CCGG 4 cut(s) 352, 361, 706, 767
MspR9I CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
MvaI CCWGG 5 cut(s) 124, 266, 483, 558, 791
MvnI CGCG 2 cut(s) 165, 403
MwoI GCNNNNNNNGC 6 cut(s) 149, 231, 329, 397, 503, 687
NarI GGCGCC 2 cut(s) 127, 321
NciI CCSGG 1 cut(s) 362
NcoI CCATGG 1 cut(s) 740
NdeII GATC 1 cut(s) 283
NlaIII CATG 4 cut(s) 55, 244, 400, 744
NlaIV GGNNCC 4 cut(s) 128, 322, 338, 480
NmeAIII GCCGAG 2 cut(s) 88, 135
NspI RCATGY 1 cut(s) 55
PaeR7I CTCGAG 1 cut(s) 810
PaqCI CACCTGC 1 cut(s) 283
PcsI WCGNNNNNNNCGW 2 cut(s) 198, 252
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 2 cut(s) 428, 553
PflFI GACNNNGTC 1 cut(s) 362
PflMI CCANNNNNTGG 2 cut(s) 333, 746
PfoI TCCNGGA 1 cut(s) 264
PkrI GCNGC 5 cut(s) 402, 442, 661, 692, 861
PleI GAGTC 1 cut(s) 13
PluTI GGCGCC 2 cut(s) 130, 324
PpsI GAGTC 1 cut(s) 13
PpuMI RGGWCCY 1 cut(s) 793
Psp124BI GAGCTC 1 cut(s) 114
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 5 cut(s) 122, 264, 481, 556, 789
PspGI CCWGG 5 cut(s) 122, 264, 481, 556, 789
PspN4I GGNNCC 4 cut(s) 128, 322, 338, 480
PspPI GGNCC 5 cut(s) 77, 307, 354, 560, 793
PspPPI RGGWCCY 1 cut(s) 793
PstI CTGCAG 1 cut(s) 470
PsyI GACNNNGTC 1 cut(s) 362
RsaI GTAC 3 cut(s) 119, 191, 338
RsaNI GTAC 3 cut(s) 118, 190, 337
RseI CAYNNNNRTG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 954
SatI GCNGC 5 cut(s) 401, 441, 660, 691, 860
Sau3AI GATC 1 cut(s) 283
Sau96I GGNCC 5 cut(s) 77, 307, 354, 560, 793
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 6 cut(s) 124, 266, 362, 483, 558, 791
SduI GDGCHC 5 cut(s) 24, 114, 518, 754, 820
SfaNI GCATC 1 cut(s) 54
SfcI CTRYAG 1 cut(s) 466
SfoI GGCGCC 2 cut(s) 128, 322
Sfr274I CTCGAG 1 cut(s) 810
SinI GGWCC 2 cut(s) 560, 793
SlaI CTCGAG 1 cut(s) 810
SmiMI CAYNNNNRTG 1 cut(s) 50
SmlI CTYRAG 3 cut(s) 382, 753, 810
SmoI CTYRAG 3 cut(s) 382, 753, 810
Sse9I AATT 4 cut(s) 665, 709, 721, 851
SsiI CCGC 9 cut(s) 150, 163, 210, 401, 660, 690, 735, 840, 860
SspDI GGCGCC 2 cut(s) 126, 320
SspMI CTAG 1 cut(s) 797
SstI GAGCTC 1 cut(s) 114
StyD4I CCNGG 6 cut(s) 122, 264, 360, 481, 556, 789
StyI CCWWGG 2 cut(s) 372, 740
TaaI ACNGT 1 cut(s) 31
TaiI ACGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 426, 811
TasI AATT 4 cut(s) 665, 709, 721, 851
TauI GCSGC 4 cut(s) 403, 662, 693, 862
TfiI GAWTC 2 cut(s) 428, 553
Tru1I TTAA 1 cut(s) 954
Tru9I TTAA 1 cut(s) 954
TscAI CASTG 1 cut(s) 691
TseI GCWGC 1 cut(s) 440
TspDTI ATGAA 5 cut(s) 385, 657, 817, 939, 940
TspRI CASTG 1 cut(s) 691
Tth111I GACNNNGTC 1 cut(s) 362
Van91I CCANNNNNTGG 2 cut(s) 333, 746
VpaK11BI GGWCC 2 cut(s) 560, 793
XapI RAATTY 3 cut(s) 665, 709, 851
XceI RCATGY 1 cut(s) 55
XhoI CTCGAG 1 cut(s) 810
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.